LOCUS NC_000913 4639675 bp DNA circular BCT 16-JUL-2010 DEFINITION Escherichia coli str. K-12 substr. MG1655 chromosome, complete genome. ACCESSION NC_000913 VERSION NC_000913.2 GI:49175990 DBLINK Project: 225 KEYWORDS . SOURCE Escherichia coli str. K-12 substr. MG1655 ORGANISM Escherichia coli str. K-12 substr. MG1655 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 4639675) AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L. TITLE Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 JOURNAL Nucleic Acids Res. 34 (1), 1-9 (2006) PUBMED 16397293 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4639675) AUTHORS Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y. TITLE The complete genome sequence of Escherichia coli K-12 JOURNAL Science 277 (5331), 1453-1474 (1997) PUBMED 9278503 REFERENCE 3 (bases 1 to 4639675) AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L. TITLE Workshop on Annotation of Escherichia coli K-12 JOURNAL Unpublished REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections) REFERENCE 4 (bases 1 to 4639675) AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H. TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56 JOURNAL Unpublished REMARK ASAP download 10 June 2004 (annotation updates) REFERENCE 5 (bases 1 to 4639675) AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T. TITLE A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains JOURNAL Unpublished REMARK GenBank accessions AG613214 to AG613378 (sequence corrections) REFERENCE 6 (bases 1 to 4639675) AUTHORS Perna,N.T. TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction JOURNAL Unpublished REMARK GenBank accession AY605712 (sequence corrections) REFERENCE 7 (bases 1 to 4639675) AUTHORS Rudd,K.E. TITLE A manual approach to accurate translation start site annotation: an E. coli K-12 case study JOURNAL Unpublished REFERENCE 8 (bases 1 to 4639675) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-JUL-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 (bases 1 to 4639675) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (08-JUL-2010) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Annotation update from ecogene.org as a multi-database collaboration REFERENCE 10 (bases 1 to 4639675) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Annotation update from ecogene.org as a multi-database collaboration REFERENCE 11 (bases 1 to 4639675) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein updates by submitter REFERENCE 12 (bases 1 to 4639675) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Sequence update by submitter REFERENCE 13 (bases 1 to 4639675) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 14 (bases 1 to 4639675) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 15 (bases 1 to 4639675) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to U00096. On Jun 24, 2004 this sequence version replaced gi:16127994. Current U00096 annotation updates are derived from EcoGene http://ecogene.org. Suggestions for updates can be sent to Dr. Kenneth Rudd (krudd@miami.edu). These updates are being generated from a collaboration that also includes ASAP/ERIC, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4639675 /organism="Escherichia coli str. K-12 substr. MG1655" /mol_type="genomic DNA" /strain="K-12" /sub_strain="MG1655" /db_xref="taxon:511145" gene 190..255 /gene="thrL" /locus_tag="b0001" /gene_synonym="ECK0001; JW4367" /db_xref="ECOCYC:EG11277" /db_xref="EcoGene:EG11277" /db_xref="GeneID:944742" CDS 190..255 /gene="thrL" /locus_tag="b0001" /gene_synonym="ECK0001; JW4367" /function="leader; Amino acid biosynthesis: Threonine" /function="1.5.1.8 metabolism; building block biosynthesis; amino acids; threonine" /GO_process="GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="thr operon leader peptide" /protein_id="NP_414542.1" /db_xref="GI:16127995" /db_xref="ASAP:ABE-0000006" /db_xref="UniProtKB/Swiss-Prot:P0AD86" /db_xref="ECOCYC:EG11277" /db_xref="EcoGene:EG11277" /db_xref="GeneID:944742" /translation="MKRISTTITTTITITTGNGAG" gene 337..2799 /gene="thrA" /locus_tag="b0002" /gene_synonym="ECK0002; Hs; JW0001; thrA1; thrA2; thrD" /db_xref="ECOCYC:EG10998" /db_xref="EcoGene:EG10998" /db_xref="GeneID:945803" CDS 337..2799 /gene="thrA" /locus_tag="b0002" /gene_synonym="ECK0002; Hs; JW0001; thrA1; thrA2; thrD" /EC_number="2.7.2.4" /EC_number="1.1.1.3" /function="enzyme; Amino acid biosynthesis: Threonine" /function="1.5.1.8 metabolism; building block biosynthesis; amino acids; threonine" /function="1.5.1.21 metabolism; building block biosynthesis; amino acids; homoserine" /function="7.1 location of gene products; cytoplasm" /experiment="N-terminus verified by Edman degradation: PMID 354697,4562989" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009090 - homoserine biosynthetic process; GO:0009086 - methionine biosynthetic process; GO:0009088 - threonine biosynthetic process" /note="bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal)" /codon_start=1 /transl_table=11 /product="fused aspartokinase I and homoserine dehydrogenase I" /protein_id="NP_414543.1" /db_xref="GI:16127996" /db_xref="ASAP:ABE-0000008" /db_xref="UniProtKB/Swiss-Prot:P00561" /db_xref="ECOCYC:EG10998" /db_xref="EcoGene:EG10998" /db_xref="GeneID:945803" /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY LESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD FLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLN AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG KVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG NDVTAAGVFADLLRTLSWKLGV" gene 2801..3733 /gene="thrB" /locus_tag="b0003" /gene_synonym="ECK0003; JW0002" /db_xref="ECOCYC:EG10999" /db_xref="EcoGene:EG10999" /db_xref="GeneID:947498" CDS 2801..3733 /gene="thrB" /locus_tag="b0003" /gene_synonym="ECK0003; JW0002" /EC_number="2.7.1.39" /function="enzyme; Amino acid biosynthesis: Threonine" /function="1.5.1.8 metabolism; building block biosynthesis; amino acids; threonine" /function="7.1 location of gene products; cytoplasm" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="NP_414544.1" /db_xref="GI:16127997" /db_xref="ASAP:ABE-0000010" /db_xref="UniProtKB/Swiss-Prot:P00547" /db_xref="ECOCYC:EG10999" /db_xref="EcoGene:EG10999" /db_xref="GeneID:947498" /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPETA QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN" gene 3734..5020 /gene="thrC" /locus_tag="b0004" /gene_synonym="ECK0004; JW0003" /db_xref="ECOCYC:EG11000" /db_xref="EcoGene:EG11000" /db_xref="GeneID:945198" CDS 3734..5020 /gene="thrC" /locus_tag="b0004" /gene_synonym="ECK0004; JW0003" /EC_number="4.2.3.1" /function="enzyme; Amino acid biosynthesis: Threonine" /function="1.5.1.8 metabolism; building block biosynthesis; amino acids; threonine" /function="7.1 location of gene products; cytoplasm" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="threonine synthase" /protein_id="NP_414545.1" /db_xref="GI:16127998" /db_xref="ASAP:ABE-0000012" /db_xref="UniProtKB/Swiss-Prot:P00934" /db_xref="ECOCYC:EG11000" /db_xref="EcoGene:EG11000" /db_xref="GeneID:945198" /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR LLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ" gene 5234..5530 /gene="yaaX" /locus_tag="b0005" /gene_synonym="ECK0005; JW0004" /db_xref="ECOCYC:G6081" /db_xref="EcoGene:EG14384" /db_xref="GeneID:944747" CDS 5234..5530 /gene="yaaX" /locus_tag="b0005" /gene_synonym="ECK0005; JW0004" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414546.1" /db_xref="GI:16127999" /db_xref="ASAP:ABE-0000015" /db_xref="UniProtKB/Swiss-Prot:P75616" /db_xref="ECOCYC:G6081" /db_xref="EcoGene:EG14384" /db_xref="GeneID:944747" /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGY YWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR" repeat_region 5565..5669 /note="RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(5683..6459) /gene="yaaA" /locus_tag="b0006" /gene_synonym="ECK0006; JW0005" /db_xref="ECOCYC:EG10011" /db_xref="EcoGene:EG10011" /db_xref="GeneID:944749" CDS complement(5683..6459) /gene="yaaA" /locus_tag="b0006" /gene_synonym="ECK0006; JW0005" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0246 family" /protein_id="NP_414547.1" /db_xref="GI:16128000" /db_xref="ASAP:ABE-0000018" /db_xref="UniProtKB/Swiss-Prot:P0A8I3" /db_xref="ECOCYC:EG10011" /db_xref="EcoGene:EG10011" /db_xref="GeneID:944749" /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF IIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR" gene complement(6529..7959) /gene="yaaJ" /locus_tag="b0007" /gene_synonym="ECK0007; JW0006" /db_xref="ECOCYC:EG11555" /db_xref="EcoGene:EG11555" /db_xref="GeneID:944745" CDS complement(6529..7959) /gene="yaaJ" /locus_tag="b0007" /gene_synonym="ECK0007; JW0006" /function="putative transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="inner membrane transport protein" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_414548.1" /db_xref="GI:16128001" /db_xref="ASAP:ABE-0000020" /db_xref="UniProtKB/Swiss-Prot:P30143" /db_xref="ECOCYC:EG11555" /db_xref="EcoGene:EG11555" /db_xref="GeneID:944745" /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIG MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG VQANAVARALSFSFDFPPLVTGIILAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLT SLVICVMNIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNGTTYMPLEGIQ LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRIC TFATVIGGTLLSLPLMWQLADIIMACMAITNLTAILLLSPVVHTIASDYLRQRKLGVR PVFDPLRYPDIGRQLSPDAWDDVSQE" gene 8238..9191 /gene="talB" /locus_tag="b0008" /gene_synonym="ECK0008; JW0007; yaaK" /db_xref="ECOCYC:EG11556" /db_xref="EcoGene:EG11556" /db_xref="GeneID:944748" CDS 8238..9191 /gene="talB" /locus_tag="b0008" /gene_synonym="ECK0008; JW0007; yaaK" /EC_number="2.2.1.2" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /function="1.7.3 metabolism; central intermediary metabolism; pentose phosphate shunt, non-oxidative branch" /function="7.1 location of gene products; cytoplasm" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009052 - pentose-phosphate shunt, non-oxidative branch" /codon_start=1 /transl_table=11 /product="transaldolase B" /protein_id="NP_414549.1" /db_xref="GI:16128002" /db_xref="ASAP:ABE-0000027" /db_xref="UniProtKB/Swiss-Prot:P0A870" /db_xref="ECOCYC:EG11556" /db_xref="EcoGene:EG11556" /db_xref="GeneID:944748" /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY ETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARI TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL" mat_peptide 8241..9188 /gene="talB" /locus_tag="b0008" /gene_synonym="ECK0008; JW0007; yaaK" /product="transaldolase B" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9298646" gene 9306..9893 /gene="mog" /locus_tag="b0009" /gene_synonym="bisD; chlG; ECK0009; JW0008; mogA; yaaG" /db_xref="ECOCYC:EG11511" /db_xref="EcoGene:EG11511" /db_xref="GeneID:944760" CDS 9306..9893 /gene="mog" /locus_tag="b0009" /gene_synonym="bisD; chlG; ECK0009; JW0008; mogA; yaaG" /function="transport; Biosynthesis of cofactors, carriers: Molybdopterin" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="putative molybdochetalase in molybdopterine biosynthesis" /codon_start=1 /transl_table=11 /product="molybdochelatase incorporating molybdenum into molybdopterin" /protein_id="NP_414550.1" /db_xref="GI:16128003" /db_xref="ASAP:ABE-0000030" /db_xref="UniProtKB/Swiss-Prot:P0AF03" /db_xref="ECOCYC:EG11511" /db_xref="EcoGene:EG11511" /db_xref="GeneID:944760" /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFA SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE" gene complement(9928..10494) /gene="yaaH" /locus_tag="b0010" /gene_synonym="ECK0010; JW0009" /db_xref="ECOCYC:EG11512" /db_xref="EcoGene:EG11512" /db_xref="GeneID:944792" CDS complement(9928..10494) /gene="yaaH" /locus_tag="b0010" /gene_synonym="ECK0010; JW0009" /codon_start=1 /transl_table=11 /product="inner membrane protein, Grp1_Fun34_YaaH family" /protein_id="NP_414551.1" /db_xref="GI:16128004" /db_xref="ASAP:ABE-0000032" /db_xref="UniProtKB/Swiss-Prot:P0AC98" /db_xref="ECOCYC:EG11512" /db_xref="EcoGene:EG11512" /db_xref="GeneID:944792" /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC GASAIYLAMGEVLNEQFGRTVLPIGESH" gene complement(10643..11356) /gene="yaaW" /locus_tag="b0011" /gene_synonym="ECK0011; htgA; htpY; JW0010" /db_xref="ECOCYC:G6082" /db_xref="EcoGene:EG14340" /db_xref="GeneID:944771" CDS complement(10643..11356) /gene="yaaW" /locus_tag="b0011" /gene_synonym="ECK0011; htgA; htpY; JW0010" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0174 family" /protein_id="NP_414552.1" /db_xref="GI:16128005" /db_xref="ASAP:ABE-0000037" /db_xref="UniProtKB/Swiss-Prot:P75617" /db_xref="ECOCYC:G6082" /db_xref="EcoGene:EG14340" /db_xref="GeneID:944771" /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKL LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT IPAVLQIACLRRMVSATQV" gene complement(11382..11786) /gene="yaaI" /locus_tag="b0013" /gene_synonym="ECK0013; JW0012" /db_xref="ECOCYC:G8202" /db_xref="EcoGene:EG11513" /db_xref="GeneID:944751" CDS complement(11382..11786) /gene="yaaI" /locus_tag="b0013" /gene_synonym="ECK0013; JW0012" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0412 family" /protein_id="NP_414554.1" /db_xref="GI:16128007" /db_xref="ASAP:ABE-0000043" /db_xref="UniProtKB/Swiss-Prot:P28696" /db_xref="ECOCYC:G8202" /db_xref="EcoGene:EG11513" /db_xref="GeneID:944751" /translation="MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLAL KLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININS DNDNKRCVSKITFSGHTVNSSDMATLKIIGDD" gene 12163..14079 /gene="dnaK" /locus_tag="b0014" /gene_synonym="ECK0014; groPAB; groPC; groPF; grpC; grpF; JW0013; seg" /db_xref="ECOCYC:EG10241" /db_xref="EcoGene:EG10241" /db_xref="GeneID:944750" CDS 12163..14079 /gene="dnaK" /locus_tag="b0014" /gene_synonym="ECK0014; groPAB; groPC; groPF; grpC; grpF; JW0013; seg" /function="factor; Chaperones" /function="2.3.4 information transfer; protein related; chaperoning, folding" /function="5.5.1 cell processes; adaptation to stress; osmotic pressure" /function="7.1 location of gene products; cytoplasm" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding; GO:0006970 - response to osmotic stress" /note="chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins" /codon_start=1 /transl_table=11 /product="chaperone Hsp70, co-chaperone with DnaJ" /protein_id="NP_414555.1" /db_xref="GI:16128008" /db_xref="ASAP:ABE-0000052" /db_xref="UniProtKB/Swiss-Prot:P0A6Y8" /db_xref="ECOCYC:EG10241" /db_xref="EcoGene:EG10241" /db_xref="GeneID:944750" /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD DVVDAEFEEVKDKK" mat_peptide 12166..14076 /gene="dnaK" /locus_tag="b0014" /gene_synonym="ECK0014; groPAB; groPC; groPF; grpC; grpF; JW0013; seg" /product="chaperone Hsp70, co-chaperone with DnaJ" /experiment="N-terminus verified by Edman degradation: PMID 1396676,7783627,9298646" gene 14168..15298 /gene="dnaJ" /locus_tag="b0015" /gene_synonym="ECK0015; faa; groP; grpC; JW0014" /db_xref="ECOCYC:EG10240" /db_xref="EcoGene:EG10240" /db_xref="GeneID:944753" CDS 14168..15298 /gene="dnaJ" /locus_tag="b0015" /gene_synonym="ECK0015; faa; groP; grpC; JW0014" /function="factor; Chaperones" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /note="chaperone with DnaK; heat shock protein" /codon_start=1 /transl_table=11 /product="chaperone Hsp40, co-chaperone with DnaK" /protein_id="NP_414556.1" /db_xref="GI:16128009" /db_xref="ASAP:ABE-0000054" /db_xref="UniProtKB/Swiss-Prot:P08622" /db_xref="ECOCYC:EG10240" /db_xref="EcoGene:EG10240" /db_xref="GeneID:944753" /translation="MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAE AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA GVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN ERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR" mat_peptide 14171..15295 /gene="dnaJ" /locus_tag="b0015" /gene_synonym="ECK0015; faa; groP; grpC; JW0014" /product="chaperone Hsp40, co-chaperone with DnaK" /experiment="N-terminus verified by Edman degradation: PMID 3003084" repeat_region 15387..16731 /mobile_element="insertion sequence:IS186A" gene 15445..16557 /gene="insL" /locus_tag="b0016" /gene_synonym="ECK0016" /db_xref="ECOCYC:G6083" /db_xref="EcoGene:EG40012" /db_xref="GeneID:944754" CDS 15445..16557 /gene="insL" /locus_tag="b0016" /gene_synonym="ECK0016" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS186 transposase" /protein_id="NP_414557.1" /db_xref="GI:16128010" /db_xref="ASAP:ABE-0000058" /db_xref="ECOCYC:G6083" /db_xref="EcoGene:EG40012" /db_xref="GeneID:944754" /translation="MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLL RLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAV TGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFA QTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGL DCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQA ETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPEL AKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN" gene complement(16751..16960) /gene="mokC" /locus_tag="b0018" /gene_synonym="ECK4466; gefL" /db_xref="ECOCYC:EG10373" /db_xref="EcoGene:EG12074" /db_xref="GeneID:944756" CDS complement(16751..16960) /gene="mokC" /locus_tag="b0018" /gene_synonym="ECK4466; gefL" /function="component of addiction module" /function="modulation of cell killing" /function="5.6.3 cell processes; protection; cell killing" /function="10 cryptic genes" /note="regulatory peptide whose translation enables hokC (gef) expression" /codon_start=1 /transl_table=11 /product="regulatory protein for HokC, overlaps CDS of hokC" /protein_id="NP_414559.1" /db_xref="GI:16128012" /db_xref="ASAP:ABE-0000064" /db_xref="UniProtKB/Swiss-Prot:P33236" /db_xref="ECOCYC:EG10373" /db_xref="EcoGene:EG12074" /db_xref="GeneID:944756" /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT RKDLCEVHIRTGQTEVAVFTAYESE" gene complement(16751..16903) /gene="hokC" /locus_tag="b4412" /gene_synonym="ECK0018; gef; JW5879" /db_xref="ECOCYC:G0-9563" /db_xref="EcoGene:EG10373" /db_xref="GeneID:2847744" CDS complement(16751..16903) /gene="hokC" /locus_tag="b4412" /gene_synonym="ECK0018; gef; JW5879" /function="component of addiction module" /function="cell killing" /note="small toxic membrane polypeptide" /codon_start=1 /transl_table=11 /product="toxic membrane protein, small" /protein_id="YP_025292.1" /db_xref="GI:49175991" /db_xref="ASAP:ABE-0047278" /db_xref="UniProtKB/Swiss-Prot:P0ACG4" /db_xref="ECOCYC:G0-9563" /db_xref="EcoGene:EG10373" /db_xref="GeneID:2847744" /translation="MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVF TAYESE" gene 16952..17006 /gene="sokC" /locus_tag="b4413" /gene_synonym="ECK0019; JWR0224; sof" /db_xref="ECOCYC:G0-9581" /db_xref="EcoGene:EG31128" /db_xref="GeneID:2847745" ncRNA 16952..17006 /gene="sokC" /locus_tag="b4413" /gene_synonym="ECK0019; JWR0224; sof" /ncRNA_class="antisense_RNA" /product="sRNA antisense regulator blocking mokC, and hence hokC, translation" /note="IS186A interrupts hokC transcript downstream of hokC gene in K-12" /function="component of addiction module" /db_xref="ASAP:ABE-0047238" /db_xref="ECOCYC:G0-9581" /db_xref="EcoGene:EG31128" /db_xref="GeneID:2847745" gene 17489..18655 /gene="nhaA" /locus_tag="b0019" /gene_synonym="ant; antA; ECK0020; JW0018" /db_xref="ECOCYC:EG10652" /db_xref="EcoGene:EG10652" /db_xref="GeneID:944758" CDS 17489..18655 /gene="nhaA" /locus_tag="b0019" /gene_synonym="ant; antA; ECK0020; JW0018" /function="transport; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 8381959" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009268 - response to pH" /note="Na+/H antiporter, pH dependent" /codon_start=1 /transl_table=11 /product="sodium-proton antiporter" /protein_id="NP_414560.1" /db_xref="GI:16128013" /db_xref="ASAP:ABE-0000068" /db_xref="UniProtKB/Swiss-Prot:P13738" /db_xref="ECOCYC:EG10652" /db_xref="EcoGene:EG10652" /db_xref="GeneID:944758" /translation="MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLET PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTA VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGIL CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV" gene 18715..19620 /gene="nhaR" /locus_tag="b0020" /gene_synonym="antO; ECK0021; JW0019; yaaB" /db_xref="ECOCYC:EG11078" /db_xref="EcoGene:EG11078" /db_xref="GeneID:944757" CDS 18715..19620 /gene="nhaR" /locus_tag="b0020" /gene_synonym="antO; ECK0021; JW0019; yaaB" /function="regulator; Transport of small molecules: Cations" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0009268 - response to pH; GO:0006350 - transcription" /note="transcriptional activator of nhaA" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator" /protein_id="NP_414561.1" /db_xref="GI:16128014" /db_xref="ASAP:ABE-0000072" /db_xref="UniProtKB/Swiss-Prot:P0A9G2" /db_xref="ECOCYC:EG11078" /db_xref="EcoGene:EG11078" /db_xref="GeneID:944757" /translation="MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRAL EERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVA DALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQE GLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNV EILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAE RMIQHPAVQRICNTDYSALFSPAVR" repeat_region complement(19796..20563) /mobile_element="insertion sequence:IS1A" gene complement(19811..20314) /gene="insB" /locus_tag="b0021" /gene_synonym="ECK0022" /db_xref="ECOCYC:G6085" /db_xref="EcoGene:EG40002" /db_xref="GeneID:944743" CDS complement(19811..20314) /gene="insB" /locus_tag="b0021" /gene_synonym="ECK0022" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 transposase B" /protein_id="NP_414562.1" /db_xref="GI:16128015" /db_xref="ASAP:ABE-0000075" /db_xref="ECOCYC:G6085" /db_xref="EcoGene:EG40002" /db_xref="GeneID:944743" /translation="MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene complement(20233..20508) /gene="insA" /locus_tag="b0022" /gene_synonym="ECK0023" /db_xref="ECOCYC:G6086" /db_xref="EcoGene:EG40001" /db_xref="GeneID:948449" CDS complement(20233..20508) /gene="insA" /locus_tag="b0022" /gene_synonym="ECK0023" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 repressor TnpA" /protein_id="NP_414563.1" /db_xref="GI:16128016" /db_xref="ASAP:ABE-0000078" /db_xref="ECOCYC:G6086" /db_xref="EcoGene:EG40001" /db_xref="GeneID:948449" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR" gene complement(20815..21078) /gene="rpsT" /locus_tag="b0023" /gene_synonym="ECK0024; JW0022; sup" /db_xref="ECOCYC:EG10919" /db_xref="EcoGene:EG10919" /db_xref="GeneID:944759" CDS complement(20815..21078) /gene="rpsT" /locus_tag="b0023" /gene_synonym="ECK0024; JW0022; sup" /function="structural component; Ribosomal proteins - synthesis, modification" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0003735 - structural constituent of ribosome" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S20" /protein_id="NP_414564.1" /db_xref="GI:16128017" /db_xref="ASAP:ABE-0000082" /db_xref="UniProtKB/Swiss-Prot:P0A7U7" /db_xref="ECOCYC:EG10919" /db_xref="EcoGene:EG10919" /db_xref="GeneID:944759" /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA" mat_peptide complement(20818..21075) /gene="rpsT" /locus_tag="b0023" /gene_synonym="ECK0024; JW0022; sup" /product="30S ribosomal subunit protein S20" /experiment="N-terminus verified by Edman degradation: PMID 786731" gene 21181..21399 /gene="yaaY" /locus_tag="b0024" /gene_synonym="ECK0025; JW5003" /db_xref="ECOCYC:G6087" /db_xref="EcoGene:EG14386" /db_xref="GeneID:949128" CDS 21181..21399 /gene="yaaY" /locus_tag="b0024" /gene_synonym="ECK0025; JW5003" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414565.1" /db_xref="GI:16128018" /db_xref="ASAP:ABE-0000089" /db_xref="UniProtKB/Swiss-Prot:P75620" /db_xref="ECOCYC:G6087" /db_xref="EcoGene:EG14386" /db_xref="GeneID:949128" /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICAMAMK SHFFLISVLNRRLTLTAVQGILGRFSLF" gene 21407..22348 /gene="ribF" /locus_tag="b0025" /gene_synonym="ECK0026; JW0023; yaaC" /db_xref="ECOCYC:EG11079" /db_xref="EcoGene:EG11079" /db_xref="GeneID:949129" CDS 21407..22348 /gene="ribF" /locus_tag="b0025" /gene_synonym="ECK0026; JW0023; yaaC" /EC_number="2.7.1.26" /EC_number="2.7.7.2" /function="putative regulator; Not classified" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="bifunctional riboflavin kinase/FAD synthetase" /protein_id="NP_414566.1" /db_xref="GI:16128019" /db_xref="ASAP:ABE-0000091" /db_xref="UniProtKB/Swiss-Prot:P0AG40" /db_xref="ECOCYC:EG11079" /db_xref="EcoGene:EG11079" /db_xref="GeneID:949129" /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA" gene 22391..25207 /gene="ileS" /locus_tag="b0026" /gene_synonym="ECK0027; ilvS; JW0024" /db_xref="ECOCYC:EG10492" /db_xref="EcoGene:EG10492" /db_xref="GeneID:944761" CDS 22391..25207 /gene="ileS" /locus_tag="b0026" /gene_synonym="ECK0027; ilvS; JW0024" /EC_number="6.1.1.5" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="isoleucine tRNA synthetase" /codon_start=1 /transl_table=11 /product="isoleucyl-tRNA synthetase" /protein_id="NP_414567.1" /db_xref="GI:16128020" /db_xref="ASAP:ABE-0000094" /db_xref="UniProtKB/Swiss-Prot:P00956" /db_xref="ECOCYC:EG10492" /db_xref="EcoGene:EG10492" /db_xref="GeneID:944761" /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALG DELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV AEHAEICGRCVSNVAGDGEKRKFA" mat_peptide 22394..25204 /gene="ileS" /locus_tag="b0026" /gene_synonym="ECK0027; ilvS; JW0024" /product="isoleucyl-tRNA synthetase" /experiment="N-terminus verified by Edman degradation: PMID 6390679,7929087" gene 25207..25701 /gene="lspA" /locus_tag="b0027" /gene_synonym="ECK0028; JW0025" /db_xref="ECOCYC:EG10548" /db_xref="EcoGene:EG10548" /db_xref="GeneID:944800" CDS 25207..25701 /gene="lspA" /locus_tag="b0027" /gene_synonym="ECK0028; JW0025" /EC_number="3.4.23.36" /function="enzyme; Protein, peptide secretion" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="prolipoprotein signal peptidase (SPase II)" /codon_start=1 /transl_table=11 /product="prolipoprotein signal peptidase (signal peptidase II)" /protein_id="NP_414568.1" /db_xref="GI:16128021" /db_xref="ASAP:ABE-0000096" /db_xref="UniProtKB/Swiss-Prot:P00804" /db_xref="ECOCYC:EG10548" /db_xref="EcoGene:EG10548" /db_xref="GeneID:944800" /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR AKKQ" repeat_region 25710..25795 /note="REP2 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 25826..26275 /gene="fkpB" /locus_tag="b0028" /gene_synonym="ECK0029; JW0026; slpA; yaaD" /db_xref="ECOCYC:EG11080" /db_xref="EcoGene:EG11080" /db_xref="GeneID:944807" CDS 25826..26275 /gene="fkpB" /locus_tag="b0028" /gene_synonym="ECK0029; JW0026; slpA; yaaD" /EC_number="5.2.1.8" /function="putative enzyme; Proteins - translation and modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" /protein_id="NP_414569.1" /db_xref="GI:16128022" /db_xref="ASAP:ABE-0000101" /db_xref="UniProtKB/Swiss-Prot:P0AEM0" /db_xref="ECOCYC:EG11080" /db_xref="EcoGene:EG11080" /db_xref="GeneID:944807" /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA" gene 26277..27227 /gene="ispH" /locus_tag="b0029" /gene_synonym="ECK0030; JW0027; lytB; yaaE" /db_xref="ECOCYC:EG11081" /db_xref="EcoGene:EG11081" /db_xref="GeneID:944777" CDS 26277..27227 /gene="ispH" /locus_tag="b0029" /gene_synonym="ECK0030; JW0027; lytB; yaaE" /EC_number="1.17.1.2" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein" /protein_id="NP_414570.1" /db_xref="GI:16128023" /db_xref="ASAP:ABE-0000103" /db_xref="UniProtKB/Swiss-Prot:P62623" /db_xref="ECOCYC:EG11081" /db_xref="EcoGene:EG11081" /db_xref="GeneID:944777" /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD" gene 27293..28207 /gene="rihC" /locus_tag="b0030" /gene_synonym="ECK0031; JW0028; yaaF" /db_xref="ECOCYC:EG11082" /db_xref="EcoGene:EG11082" /db_xref="GeneID:944796" CDS 27293..28207 /gene="rihC" /locus_tag="b0030" /gene_synonym="ECK0031; JW0028; yaaF" /EC_number="3.2.2.-" /GO_process="GO:0009226 - nucleotide-sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="ribonucleoside hydrolase 3" /protein_id="NP_414571.1" /db_xref="GI:16128024" /db_xref="ASAP:ABE-0000109" /db_xref="UniProtKB/Swiss-Prot:P22564" /db_xref="ECOCYC:EG11082" /db_xref="EcoGene:EG11082" /db_xref="GeneID:944796" /translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALF SHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLG KPANVQVALDLDVKGFQQWVAEVLALAS" gene 28374..29195 /gene="dapB" /locus_tag="b0031" /gene_synonym="ECK0032; JW0029" /db_xref="ECOCYC:EG10206" /db_xref="EcoGene:EG10206" /db_xref="GeneID:944762" CDS 28374..29195 /gene="dapB" /locus_tag="b0031" /gene_synonym="ECK0032; JW0029" /EC_number="1.3.1.26" /function="enzyme; Amino acid biosynthesis: Lysine" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="NP_414572.1" /db_xref="GI:16128025" /db_xref="ASAP:ABE-0000112" /db_xref="UniProtKB/Swiss-Prot:P04036" /db_xref="ECOCYC:EG10206" /db_xref="EcoGene:EG10206" /db_xref="GeneID:944762" /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL" gene 29651..30799 /gene="carA" /locus_tag="b0032" /gene_synonym="arg; cap; ECK0033; JW0030; pyrA" /db_xref="ECOCYC:EG10134" /db_xref="EcoGene:EG10134" /db_xref="GeneID:949025" CDS 29651..30799 /gene="carA" /locus_tag="b0032" /gene_synonym="arg; cap; ECK0033; JW0030; pyrA" /EC_number="6.3.5.5" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /function="1.5.1.3 metabolism; building block biosynthesis; amino acids; arginine" /function="1.5.2.2 metabolism; building block biosynthesis; nucleotide; pyrimidine biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3894020,9298646,9740056" /GO_process="GO:0006526 - arginine biosynthetic process; GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate synthetase small subunit, glutamine amidotransferase" /protein_id="NP_414573.1" /db_xref="GI:16128026" /db_xref="ASAP:ABE-0000118" /db_xref="UniProtKB/Swiss-Prot:P0A6F1" /db_xref="ECOCYC:EG10134" /db_xref="EcoGene:EG10134" /db_xref="GeneID:949025" /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK" gene 30817..34038 /gene="carB" /locus_tag="b0033" /gene_synonym="cap; ECK0034; JW0031; pyrA" /db_xref="ECOCYC:EG10135" /db_xref="EcoGene:EG10135" /db_xref="GeneID:944775" CDS 30817..34038 /gene="carB" /locus_tag="b0033" /gene_synonym="cap; ECK0034; JW0031; pyrA" /EC_number="6.3.5.5" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /function="1.5.1.3 metabolism; building block biosynthesis; amino acids; arginine" /function="1.5.2.2 metabolism; building block biosynthesis; nucleotide; pyrimidine biosynthesis" /GO_process="GO:0006526 - arginine biosynthetic process; GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase large subunit" /protein_id="NP_414574.1" /db_xref="GI:16128027" /db_xref="ASAP:ABE-0000121" /db_xref="UniProtKB/Swiss-Prot:P00968" /db_xref="ECOCYC:EG10135" /db_xref="EcoGene:EG10135" /db_xref="GeneID:944775" /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVD GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGV REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK" mat_peptide 30820..34035 /gene="carB" /locus_tag="b0033" /gene_synonym="cap; ECK0034; JW0031; pyrA" /product="carbamoyl-phosphate synthase large subunit" /experiment="N-terminus verified by Edman degradation: PMID 6308632" gene 34300..34695 /gene="caiF" /locus_tag="b0034" /gene_synonym="ECK0035; JW0033" /db_xref="ECOCYC:G6088" /db_xref="EcoGene:EG13451" /db_xref="GeneID:944795" CDS 34300..34695 /gene="caiF" /locus_tag="b0034" /gene_synonym="ECK0035; JW0033" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0009310 - amine catabolic process; GO:0006350 - transcription" /note="transcriptional regulator of cai operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator" /protein_id="NP_414576.4" /db_xref="GI:90111079" /db_xref="ASAP:ABE-0000125" /db_xref="UniProtKB/Swiss-Prot:P0AE58" /db_xref="ECOCYC:G6088" /db_xref="EcoGene:EG13451" /db_xref="GeneID:944795" /translation="MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNT LTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVR KTPRIPAVPLTELNREQKWQMMLSKSMRR" repeat_region 34727..34762 /note="REP3 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(34781..35371) /gene="caiE" /locus_tag="b0035" /gene_synonym="ECK0036; JW5004" /db_xref="ECOCYC:EG12608" /db_xref="EcoGene:EG12608" /db_xref="GeneID:948999" CDS complement(34781..35371) /gene="caiE" /locus_tag="b0035" /gene_synonym="ECK0036; JW5004" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_process="GO:0009310 - amine catabolic process; GO:0042413 - carnitine catabolic process" /note="possible synthesis of cofactor for carnitine racemase and dehydratase" /codon_start=1 /transl_table=11 /product="stimulator of CaiD and CaiB enzyme activities" /protein_id="NP_414577.2" /db_xref="GI:90111080" /db_xref="ASAP:ABE-0000128" /db_xref="UniProtKB/Swiss-Prot:P39206" /db_xref="ECOCYC:EG12608" /db_xref="EcoGene:EG12608" /db_xref="GeneID:948999" /translation="MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLR GDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCLIGRDALVGMNSV IMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQ DLVGRCHVSLHETQPLRQMEENRPRLQGTTDVTPKR" gene complement(35377..36162) /gene="caiD" /locus_tag="b0036" /gene_synonym="ECK0037; JW0035; yaaL" /db_xref="ECOCYC:EG11557" /db_xref="EcoGene:EG11557" /db_xref="GeneID:948995" CDS complement(35377..36162) /gene="caiD" /locus_tag="b0036" /gene_synonym="ECK0037; JW0035; yaaL" /EC_number="4.2.1.-" /function="enzyme; Degradation of small molecules: Amines" /GO_process="GO:0009310 - amine catabolic process; GO:0042413 - carnitine catabolic process" /note="carnitine racemase" /codon_start=1 /transl_table=11 /product="carnitinyl-CoA dehydratase" /protein_id="NP_414578.2" /db_xref="GI:221800779" /db_xref="ASAP:ABE-0000130" /db_xref="UniProtKB/Swiss-Prot:P31551" /db_xref="ECOCYC:EG11557" /db_xref="EcoGene:EG11557" /db_xref="GeneID:948995" /translation="MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDD PQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVN GYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVM TGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMP VEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR" gene complement(36271..37824) /gene="caiC" /locus_tag="b0037" /gene_synonym="ECK0038; JW0036; yaaM" /db_xref="ECOCYC:EG11558" /db_xref="EcoGene:EG11558" /db_xref="GeneID:944886" CDS complement(36271..37824) /gene="caiC" /locus_tag="b0037" /gene_synonym="ECK0038; JW0036; yaaM" /EC_number="6.3.2.-" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="probable crotonobetaine/carnitine-CoA ligase" /protein_id="NP_414579.4" /db_xref="GI:221800780" /db_xref="ASAP:ABE-0000133" /db_xref="UniProtKB/Swiss-Prot:P31552" /db_xref="ECOCYC:EG11558" /db_xref="EcoGene:EG11558" /db_xref="GeneID:944886" /translation="MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELN QEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLCEESA WILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQ PATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYL TVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTL MVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPG DKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAK VLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIV VVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCS GKIIRKNLK" gene complement(37898..39115) /gene="caiB" /locus_tag="b0038" /gene_synonym="ECK0039; JW0037; yaaN" /db_xref="ECOCYC:EG11559" /db_xref="EcoGene:EG11559" /db_xref="GeneID:948997" CDS complement(37898..39115) /gene="caiB" /locus_tag="b0038" /gene_synonym="ECK0039; JW0037; yaaN" /EC_number="2.8.3.-" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 8188598,10209289" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009310 - amine catabolic process; GO:0042413 - carnitine catabolic process" /note="l-carnitine dehydratase" /codon_start=1 /transl_table=11 /product="crotonobetainyl CoA:carnitine CoA transferase" /protein_id="NP_414580.1" /db_xref="GI:16128032" /db_xref="ASAP:ABE-0000136" /db_xref="UniProtKB/Swiss-Prot:P31572" /db_xref="ECOCYC:EG11559" /db_xref="EcoGene:EG11559" /db_xref="GeneID:948997" /translation="MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIE NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA RRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP MPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG GEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPE GTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQY VARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDI QELVSKGLAKVED" repeat_region 39151..39232 /note="REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(39244..40386) /gene="caiA" /locus_tag="b0039" /gene_synonym="ECK0040; JW0038; yaaO" /db_xref="ECOCYC:EG11560" /db_xref="EcoGene:EG11560" /db_xref="GeneID:949064" CDS complement(39244..40386) /gene="caiA" /locus_tag="b0039" /gene_synonym="ECK0040; JW0038; yaaO" /EC_number="1.3.99.-" /function="putative regulator; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 10209289" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009310 - amine catabolic process; GO:0042413 - carnitine catabolic process; GO:0006097 - glyoxylate cycle" /note="probable carnitine operon oxidoreductase" /codon_start=1 /transl_table=11 /product="crotonobetaine reductase subunit II, FAD-binding" /protein_id="NP_414581.1" /db_xref="GI:16128033" /db_xref="ASAP:ABE-0000139" /db_xref="UniProtKB/Swiss-Prot:P60584" /db_xref="ECOCYC:EG11560" /db_xref="EcoGene:EG11560" /db_xref="GeneID:949064" /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK ALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSA YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELD EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRF QLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR" gene complement(40417..41931) /gene="caiT" /locus_tag="b0040" /gene_synonym="ECK0041; JW0039; yaaP" /db_xref="ECOCYC:EG11561" /db_xref="EcoGene:EG11561" /db_xref="GeneID:944765" CDS complement(40417..41931) /gene="caiT" /locus_tag="b0040" /gene_synonym="ECK0041; JW0039; yaaP" /function="putative transport; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="probable carnitine transporter" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_414582.1" /db_xref="GI:16128034" /db_xref="ASAP:ABE-0000141" /db_xref="UniProtKB/Swiss-Prot:P31553" /db_xref="ECOCYC:EG11561" /db_xref="EcoGene:EG11561" /db_xref="GeneID:944765" /translation="MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVF SYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSA AVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYF FFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV SGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIF LARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVAR AIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRI GWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD" gene 42403..43173 /gene="fixA" /locus_tag="b0041" /gene_synonym="ECK0042; JW0040; yaaQ" /db_xref="ECOCYC:EG11562" /db_xref="EcoGene:EG11562" /db_xref="GeneID:947316" CDS 42403..43173 /gene="fixA" /locus_tag="b0041" /gene_synonym="ECK0042; JW0040; yaaQ" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="probable flavoprotein subunit, carnitine metabolism" /codon_start=1 /transl_table=11 /product="predicted electron transfer flavoprotein subunit, required for anaerobic carnitine reduction" /protein_id="NP_414583.2" /db_xref="GI:90111081" /db_xref="ASAP:ABE-0000145" /db_xref="UniProtKB/Swiss-Prot:P60566" /db_xref="ECOCYC:EG11562" /db_xref="EcoGene:EG11562" /db_xref="GeneID:947316" /translation="MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEA ACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTAS ALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVE RELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAA WSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI" gene 43188..44129 /gene="fixB" /locus_tag="b0042" /gene_synonym="ECK0043; JW0041; yaaR" /db_xref="ECOCYC:EG11563" /db_xref="EcoGene:EG11563" /db_xref="GeneID:948939" CDS 43188..44129 /gene="fixB" /locus_tag="b0042" /gene_synonym="ECK0043; JW0041; yaaR" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="probable flavoprotein subunit, carnitine metabolism" /codon_start=1 /transl_table=11 /product="predicted electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein" /protein_id="NP_414584.1" /db_xref="GI:16128036" /db_xref="ASAP:ABE-0000147" /db_xref="UniProtKB/Swiss-Prot:P31574" /db_xref="ECOCYC:EG11563" /db_xref="EcoGene:EG11563" /db_xref="GeneID:948939" /translation="MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQA IQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYR LKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDAS RTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLC KAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQT IFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR" gene 44180..45466 /gene="fixC" /locus_tag="b0043" /gene_synonym="ECK0044; JW0042; yaaS" /db_xref="ECOCYC:EG11564" /db_xref="EcoGene:EG11564" /db_xref="GeneID:948958" CDS 44180..45466 /gene="fixC" /locus_tag="b0043" /gene_synonym="ECK0044; JW0042; yaaS" /function="putative carrier; Energy metabolism, carbon: Electron transport" /GO_process="GO:0042413 - carnitine catabolic process" /note="flavoprotein; electron transport" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase with FAD/NAD(P)-binding domain" /protein_id="NP_414585.1" /db_xref="GI:16128037" /db_xref="ASAP:ABE-0000149" /db_xref="UniProtKB/Swiss-Prot:P68644" /db_xref="ECOCYC:EG11564" /db_xref="EcoGene:EG11564" /db_xref="GeneID:948958" /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN VTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRS YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD GLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY SAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSA MKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFT IDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL" gene 45463..45750 /gene="fixX" /locus_tag="b0044" /gene_synonym="ECK0045; JW0043; yaaT" /db_xref="ECOCYC:EG11565" /db_xref="EcoGene:EG11565" /db_xref="GeneID:948590" CDS 45463..45750 /gene="fixX" /locus_tag="b0044" /gene_synonym="ECK0045; JW0043; yaaT" /function="putative carrier; Not classified" /GO_process="GO:0042413 - carnitine catabolic process" /note="putative ferredoxin" /codon_start=1 /transl_table=11 /product="predicted 4Fe-4S ferredoxin-type protein" /protein_id="NP_414586.1" /db_xref="GI:16128038" /db_xref="ASAP:ABE-0000151" /db_xref="UniProtKB/Swiss-Prot:P68646" /db_xref="ECOCYC:EG11565" /db_xref="EcoGene:EG11565" /db_xref="GeneID:948590" /translation="MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACP AGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG" gene 45807..47138 /gene="yaaU" /locus_tag="b0045" /gene_synonym="ECK0046; JW0044; yabE" /db_xref="ECOCYC:EG11566" /db_xref="EcoGene:EG11566" /db_xref="GeneID:944766" CDS 45807..47138 /gene="yaaU" /locus_tag="b0045" /gene_synonym="ECK0046; JW0044; yabE" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_414587.1" /db_xref="GI:16128039" /db_xref="ASAP:ABE-0000156" /db_xref="UniProtKB/Swiss-Prot:P31679" /db_xref="ECOCYC:EG11566" /db_xref="EcoGene:EG11566" /db_xref="GeneID:944766" /translation="MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQL TPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMF VSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADL VGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFG EPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLG VGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGI WLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI FINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG" gene 47246..47776 /gene="kefF" /locus_tag="b0046" /gene_synonym="ECK0047; JW0045; yabF" /db_xref="ECOCYC:EG11568" /db_xref="EcoGene:EG11568" /db_xref="GeneID:944767" CDS 47246..47776 /gene="kefF" /locus_tag="b0046" /gene_synonym="ECK0047; JW0045; yabF" /function="putative enzyme; Not classified" /note="putative NAD(P)H oxidoreductase" /codon_start=1 /transl_table=11 /product="flavoprotein subunit for the KefC potassium efflux system" /protein_id="NP_414588.1" /db_xref="GI:16128040" /db_xref="ASAP:ABE-0000159" /db_xref="UniProtKB/Swiss-Prot:P0A754" /db_xref="ECOCYC:EG11568" /db_xref="EcoGene:EG11568" /db_xref="GeneID:944767" /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLW AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA RHYKQRLLEWQEAHHG" gene 47769..49631 /gene="kefC" /locus_tag="b0047" /gene_synonym="ECK0048; JW0046; trkC" /db_xref="ECOCYC:EG10521" /db_xref="EcoGene:EG10521" /db_xref="GeneID:944773" CDS 47769..49631 /gene="kefC" /locus_tag="b0047" /gene_synonym="ECK0048; JW0046; trkC" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0015386 - potassium:hydrogen antiporter activity" /note="K+ efflux antiporter, glutathione-regulated" /codon_start=1 /transl_table=11 /product="potassium:proton antiporter" /protein_id="NP_414589.1" /db_xref="GI:16128041" /db_xref="ASAP:ABE-0000161" /db_xref="UniProtKB/Swiss-Prot:P03819" /db_xref="ECOCYC:EG10521" /db_xref="EcoGene:EG10521" /db_xref="GeneID:944773" /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGCGALQMVICGGLLG LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS" gene 49823..50302 /gene="folA" /locus_tag="b0048" /gene_synonym="ECK0049; JW0047; tmrA" /db_xref="ECOCYC:EG10326" /db_xref="EcoGene:EG10326" /db_xref="GeneID:944790" CDS 49823..50302 /gene="folA" /locus_tag="b0048" /gene_synonym="ECK0049; JW0047; tmrA" /EC_number="1.5.1.3" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /experiment="N-terminus verified by Edman degradation: PMID 350268,4610415" /GO_process="GO:0046656 - folic acid biosynthetic process" /note="dihydrofolate reductase type I; trimethoprim resistance" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase" /protein_id="NP_414590.1" /db_xref="GI:16128042" /db_xref="ASAP:ABE-0000164" /db_xref="UniProtKB/Swiss-Prot:P0ABQ4" /db_xref="ECOCYC:EG10326" /db_xref="EcoGene:EG10326" /db_xref="GeneID:944790" /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR" repeat_region 50327..50363 /note="REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(50380..51222) /gene="apaH" /locus_tag="b0049" /gene_synonym="cfcB; ECK0050; JW0048" /db_xref="ECOCYC:EG10048" /db_xref="EcoGene:EG10048" /db_xref="GeneID:944770" CDS complement(50380..51222) /gene="apaH" /locus_tag="b0049" /gene_synonym="cfcB; ECK0050; JW0048" /EC_number="3.6.1.41" /function="enzyme; Salvage of nucleosides and nucleotides" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="diadenosine tetraphosphatase" /protein_id="NP_414591.1" /db_xref="GI:16128043" /db_xref="ASAP:ABE-0000167" /db_xref="UniProtKB/Swiss-Prot:P05637" /db_xref="ECOCYC:EG10048" /db_xref="EcoGene:EG10048" /db_xref="GeneID:944770" /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE AAAS" mat_peptide complement(50383..51219) /gene="apaH" /locus_tag="b0049" /gene_synonym="cfcB; ECK0050; JW0048" /product="diadenosine tetraphosphatase" /experiment="N-terminus verified by Edman degradation: PMID 3031429" gene complement(51229..51606) /gene="apaG" /locus_tag="b0050" /gene_synonym="corD; ECK0051; JW0049; temP" /db_xref="ECOCYC:EG10047" /db_xref="EcoGene:EG10047" /db_xref="GeneID:944772" CDS complement(51229..51606) /gene="apaG" /locus_tag="b0050" /gene_synonym="corD; ECK0051; JW0049; temP" /codon_start=1 /transl_table=11 /product="protein associated with Co2+ and Mg2+ efflux" /protein_id="NP_414592.1" /db_xref="GI:16128044" /db_xref="ASAP:ABE-0000169" /db_xref="UniProtKB/Swiss-Prot:P62672" /db_xref="ECOCYC:EG10047" /db_xref="EcoGene:EG10047" /db_xref="GeneID:944772" /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI DENGVPFSIDIPVFRLAVPTLIH" gene complement(51609..52430) /gene="rsmA" /locus_tag="b0051" /gene_synonym="ECK0052; JW0050; ksgA" /db_xref="ECOCYC:EG10523" /db_xref="EcoGene:EG10523" /db_xref="GeneID:944939" CDS complement(51609..52430) /gene="rsmA" /locus_tag="b0051" /gene_synonym="ECK0052; JW0050; ksgA" /EC_number="2.1.1.-" /function="enzyme; rRNA modification; drug/analog sensitivity" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0042493 - response to drug; GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="16S rRNA dimethyladenosine transferase, SAM-dependent" /protein_id="NP_414593.1" /db_xref="GI:16128045" /db_xref="ASAP:ABE-0000175" /db_xref="UniProtKB/Swiss-Prot:P06992" /db_xref="ECOCYC:EG10523" /db_xref="EcoGene:EG10523" /db_xref="GeneID:944939" /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES" gene complement(52427..53416) /gene="pdxA" /locus_tag="b0052" /gene_synonym="ECK0053; JW0051" /db_xref="ECOCYC:EG10691" /db_xref="EcoGene:EG10691" /db_xref="GeneID:944919" CDS complement(52427..53416) /gene="pdxA" /locus_tag="b0052" /gene_synonym="ECK0053; JW0051" /EC_number="1.1.1.262" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0008615 - pyridoxine biosynthetic process" /note="pyridoxine biosynthesis" /codon_start=1 /transl_table=11 /product="4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent" /protein_id="NP_414594.1" /db_xref="GI:16128046" /db_xref="ASAP:ABE-0000178" /db_xref="UniProtKB/Swiss-Prot:P19624" /db_xref="ECOCYC:EG10691" /db_xref="EcoGene:EG10691" /db_xref="GeneID:944919" /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT NRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLA RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM GTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ GFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ" gene complement(53416..54702) /gene="surA" /locus_tag="b0053" /gene_synonym="ECK0054; JW0052" /db_xref="ECOCYC:EG10985" /db_xref="EcoGene:EG10985" /db_xref="GeneID:944812" CDS complement(53416..54702) /gene="surA" /locus_tag="b0053" /gene_synonym="ECK0054; JW0052" /EC_number="5.2.1.8" /function="phenotype; Not classified" /GO_component="GO:0009279 - cell outer membrane" /GO_process="GO:0006457 - protein folding" /note="survival protein" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase (PPIase)" /protein_id="NP_414595.1" /db_xref="GI:16128047" /db_xref="ASAP:ABE-0000180" /db_xref="UniProtKB/Swiss-Prot:P0ABZ6" /db_xref="ECOCYC:EG10985" /db_xref="EcoGene:EG10985" /db_xref="GeneID:944812" /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN" mat_peptide complement(53419..54642) /gene="surA" /locus_tag="b0053" /gene_synonym="ECK0054; JW0052" /product="peptidyl-prolyl cis-trans isomerase (PPIase)" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841" gene complement(54755..57109) /gene="lptD" /locus_tag="b0054" /gene_synonym="ECK0055; imp; JW0053; ostA; yabG" /db_xref="ECOCYC:EG11569" /db_xref="EcoGene:EG11569" /db_xref="GeneID:945011" CDS complement(54755..57109) /gene="lptD" /locus_tag="b0054" /gene_synonym="ECK0055; imp; JW0053; ostA; yabG" /function="phenotype; Adaptations, atypical conditions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="organic solvent tolerance" /codon_start=1 /transl_table=11 /product="LPS assembly OM complex LptDE, beta-barrel component" /protein_id="NP_414596.1" /db_xref="GI:16128048" /db_xref="ASAP:ABE-0000183" /db_xref="UniProtKB/Swiss-Prot:P31554" /db_xref="ECOCYC:EG11569" /db_xref="EcoGene:EG11569" /db_xref="GeneID:945011" /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKV SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI YDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL" mat_peptide complement(54758..57037) /gene="lptD" /locus_tag="b0054" /gene_synonym="ECK0055; imp; JW0053; ostA; yabG" /product="LPS assembly OM complex LptDE, beta-barrel component" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene 57364..58179 /gene="djlA" /locus_tag="b0055" /gene_synonym="ECK0056; JW0054; yabH" /db_xref="ECOCYC:EG11570" /db_xref="EcoGene:EG11570" /db_xref="GeneID:948992" CDS 57364..58179 /gene="djlA" /locus_tag="b0055" /gene_synonym="ECK0056; JW0054; yabH" /function="phenotype; Not classified" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="DnaJ-like protein, membrane anchored" /protein_id="NP_414597.1" /db_xref="GI:16128049" /db_xref="ASAP:ABE-0000187" /db_xref="UniProtKB/Swiss-Prot:P31680" /db_xref="ECOCYC:EG11570" /db_xref="EcoGene:EG11570" /db_xref="GeneID:948992" /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE LGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDA TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK" gene 58474..59269 /gene="yabP" /locus_tag="b4659" /old_locus_tag="b0056" /old_locus_tag="b0057" /gene_synonym="ECK0057; JW0055; yabQ" /pseudo /db_xref="EcoGene:EG12610" /db_xref="GeneID:944776" CDS join(58474..59052,59052..59228,59228..59269) /gene="yabP" /locus_tag="b4659" /old_locus_tag="b0056" /old_locus_tag="b0057" /gene_synonym="ECK0057; JW0055; yabQ" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000192" /db_xref="ASAP:ABE-0000194" /db_xref="UniProtKB/Swiss-Prot:P39220" /db_xref="EcoGene:EG12610" /db_xref="GeneID:944776" gene complement(59687..60346) /gene="rluA" /locus_tag="b0058" /gene_synonym="ECK0059; JW0057; yabO" /db_xref="ECOCYC:EG12609" /db_xref="EcoGene:EG12609" /db_xref="GeneID:946262" CDS complement(59687..60346) /gene="rluA" /locus_tag="b0058" /gene_synonym="ECK0059; JW0057; yabO" /EC_number="4.2.1.70" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)" /protein_id="NP_414600.1" /db_xref="GI:16128052" /db_xref="ASAP:ABE-0000196" /db_xref="UniProtKB/Swiss-Prot:P0AA37" /db_xref="ECOCYC:EG12609" /db_xref="EcoGene:EG12609" /db_xref="GeneID:946262" /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD F" mat_peptide complement(59690..60343) /gene="rluA" /locus_tag="b0058" /gene_synonym="ECK0059; JW0057; yabO" /product="pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)" /experiment="N-terminus verified by Edman degradation: PMID 7493321" gene complement(60358..63264) /gene="rapA" /locus_tag="b0059" /gene_synonym="ECK0060; hepA; JW0058; yabA" /db_xref="ECOCYC:EG11083" /db_xref="EcoGene:EG11083" /db_xref="GeneID:948523" CDS complement(60358..63264) /gene="rapA" /locus_tag="b0059" /gene_synonym="ECK0060; hepA; JW0058; yabA" /EC_number="3.6.1.-" /function="putative enzyme; RNA synthesis, modification, DNA transcription" /GO_process="GO:0009451 - RNA modification" /note="probable ATP-dependent RNA helicase" /codon_start=1 /transl_table=11 /product="RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor)" /protein_id="NP_414601.1" /db_xref="GI:16128053" /db_xref="ASAP:ABE-0000198" /db_xref="UniProtKB/Swiss-Prot:P60240" /db_xref="ECOCYC:EG11083" /db_xref="EcoGene:EG11083" /db_xref="GeneID:948523" /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ" mat_peptide complement(60361..63261) /gene="rapA" /locus_tag="b0059" /gene_synonym="ECK0060; hepA; JW0058; yabA" /product="RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor)" /experiment="N-terminus verified by Edman degradation: PMID 9614128,11751638" gene complement(63429..65780) /gene="polB" /locus_tag="b0060" /gene_synonym="dinA; ECK0061; JW0059" /db_xref="ECOCYC:EG10747" /db_xref="EcoGene:EG10747" /db_xref="GeneID:944779" CDS complement(63429..65780) /gene="polB" /locus_tag="b0060" /gene_synonym="dinA; ECK0061; JW0059" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006281 - DNA repair; GO:0006261 - DNA-dependent DNA replication; GO:0009314 - response to radiation; GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA polymerase II" /protein_id="NP_414602.1" /db_xref="GI:16128054" /db_xref="ASAP:ABE-0000202" /db_xref="UniProtKB/Swiss-Prot:P21189" /db_xref="ECOCYC:EG10747" /db_xref="EcoGene:EG10747" /db_xref="GeneID:944779" /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF" mat_peptide complement(63432..65777) /gene="polB" /locus_tag="b0060" /gene_synonym="dinA; ECK0061; JW0059" /product="DNA polymerase II" /experiment="N-terminus verified by Edman degradation: PMID 2034216,2217198" gene complement(65855..66550) /gene="araD" /locus_tag="b0061" /gene_synonym="ECK0062; JW0060" /db_xref="ECOCYC:EG10055" /db_xref="EcoGene:EG10055" /db_xref="GeneID:945294" CDS complement(65855..66550) /gene="araD" /locus_tag="b0061" /gene_synonym="ECK0062; JW0060" /EC_number="5.1.3.4" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8520491" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-ribulose-5-phosphate 4-epimerase" /protein_id="NP_414603.1" /db_xref="GI:16128055" /db_xref="ASAP:ABE-0000209" /db_xref="UniProtKB/Swiss-Prot:P08203" /db_xref="ECOCYC:EG10055" /db_xref="EcoGene:EG10055" /db_xref="GeneID:945294" /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT IWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH YLRKHGAKAYYGQ" repeat_region 66565..66812 /note="REP6 (repetitive extragenic palindromic) element; contains 6 REP sequences" gene complement(66835..68337) /gene="araA" /locus_tag="b0062" /gene_synonym="ECK0063; JW0061" /db_xref="ECOCYC:EG10052" /db_xref="EcoGene:EG10052" /db_xref="GeneID:947511" CDS complement(66835..68337) /gene="araA" /locus_tag="b0062" /gene_synonym="ECK0063; JW0061" /EC_number="5.3.1.4" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-arabinose isomerase" /protein_id="NP_414604.1" /db_xref="GI:16128056" /db_xref="ASAP:ABE-0000221" /db_xref="UniProtKB/Swiss-Prot:P08202" /db_xref="ECOCYC:EG10052" /db_xref="EcoGene:EG10052" /db_xref="GeneID:947511" /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV NSISDGDVNALVDEYESCYTMTPATQIHGKKRQNVLEAARIELGMKRFLEQGGFHAFT TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED YTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR" gene complement(68348..70048) /gene="araB" /locus_tag="b0063" /gene_synonym="ECK0064; JW0062" /db_xref="ECOCYC:EG10053" /db_xref="EcoGene:EG10053" /db_xref="GeneID:946017" CDS complement(68348..70048) /gene="araB" /locus_tag="b0063" /gene_synonym="ECK0064; JW0062" /EC_number="2.7.1.16" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-ribulokinase" /protein_id="NP_414605.1" /db_xref="GI:16128057" /db_xref="ASAP:ABE-0000223" /db_xref="UniProtKB/Swiss-Prot:P08204" /db_xref="ECOCYC:EG10053" /db_xref="EcoGene:EG10053" /db_xref="GeneID:946017" /translation="MAIAIGLDFGSDSVRALAVDCATGEEIATSVEWYPRWQKGQFCD APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG QSAFGDIYAWFGRVLGWPLEQLAAQHPELKTQINASQKQLLPALTEAWAKNPSLDHLP VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP SAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL" mat_peptide complement(68351..70045) /gene="araB" /locus_tag="b0063" /gene_synonym="ECK0064; JW0062" /product="L-ribulokinase" /experiment="N-terminus verified by Edman degradation: PMID 189315" gene 70387..71265 /gene="araC" /locus_tag="b0064" /gene_synonym="ECK0065; JW0063" /db_xref="ECOCYC:EG10054" /db_xref="EcoGene:EG10054" /db_xref="GeneID:944780" CDS 70387..71265 /gene="araC" /locus_tag="b0064" /gene_synonym="ECK0065; JW0063" /function="regulator; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0006350 - transcription" /note="transcriptional regulator for ara operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator" /protein_id="NP_414606.1" /db_xref="GI:16128058" /db_xref="ASAP:ABE-0000236" /db_xref="UniProtKB/Swiss-Prot:P0A9E0" /db_xref="ECOCYC:EG10054" /db_xref="EcoGene:EG10054" /db_xref="GeneID:944780" /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF RAGCEEKVNDVAVKLS" mat_peptide 70390..71262 /gene="araC" /locus_tag="b0064" /gene_synonym="ECK0065; JW0063" /product="DNA-binding transcriptional dual regulator" /experiment="N-terminus verified by Edman degradation: PMID 7019009" gene 71351..72115 /gene="yabI" /locus_tag="b0065" /gene_synonym="ECK0066; JW5005" /db_xref="ECOCYC:EG11571" /db_xref="EcoGene:EG11571" /db_xref="GeneID:944783" CDS 71351..72115 /gene="yabI" /locus_tag="b0065" /gene_synonym="ECK0066; JW5005" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="inner membrane protein, SNARE_assoc family" /protein_id="NP_414607.1" /db_xref="GI:16128059" /db_xref="ASAP:ABE-0000241" /db_xref="UniProtKB/Swiss-Prot:P30149" /db_xref="ECOCYC:EG11571" /db_xref="EcoGene:EG11571" /db_xref="GeneID:944783" /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG LGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV" repeat_region 72136..72220 /note="REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(72229..72927) /gene="thiQ" /locus_tag="b0066" /gene_synonym="ECK0067; JW0065; sfuC; yabJ" /db_xref="ECOCYC:EG11572" /db_xref="EcoGene:EG11572" /db_xref="GeneID:944785" CDS complement(72229..72927) /gene="thiQ" /locus_tag="b0066" /gene_synonym="ECK0067; JW0065; sfuC; yabJ" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009228 - thiamin biosynthetic process" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="thiamin transporter subunit" /protein_id="NP_414608.1" /db_xref="GI:16128060" /db_xref="ASAP:ABE-0000244" /db_xref="UniProtKB/Swiss-Prot:P31548" /db_xref="ECOCYC:EG11572" /db_xref="EcoGene:EG11572" /db_xref="GeneID:944785" /translation="MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL IAGFLTPASGSLTIDGVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL NAVQQGKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELL SGKASASALLGITG" gene complement(72911..74521) /gene="thiP" /locus_tag="b0067" /gene_synonym="ECK0068; JW0066; sfuB; yabK" /db_xref="ECOCYC:EG11573" /db_xref="EcoGene:EG11573" /db_xref="GeneID:944784" CDS complement(72911..74521) /gene="thiP" /locus_tag="b0067" /gene_synonym="ECK0068; JW0066; sfuB; yabK" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="fused thiamin transporter subunits of ABC superfamily: membrane components" /protein_id="NP_414609.1" /db_xref="GI:16128061" /db_xref="ASAP:ABE-0000246" /db_xref="UniProtKB/Swiss-Prot:P31549" /db_xref="ECOCYC:EG11573" /db_xref="EcoGene:EG11573" /db_xref="GeneID:944784" /translation="MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWV AVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLIL PVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ ALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG GGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQ GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFL LLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA VTALILLLLCFLLFTVIEKLPGRNVKTD" gene complement(74497..75480) /gene="thiB" /locus_tag="b0068" /gene_synonym="ECK0069; JW0067; sfuA; tbpA; yabL" /db_xref="ECOCYC:EG11574" /db_xref="EcoGene:EG11574" /db_xref="GeneID:946306" CDS complement(74497..75480) /gene="thiB" /locus_tag="b0068" /gene_synonym="ECK0069; JW0067; sfuA; tbpA; yabL" /function="putative transport; Transport of small molecules: Other" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009228 - thiamin biosynthetic process" /note="thiamin-binding periplasmic protein; periplasmic-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="thiamin transporter subunit" /protein_id="NP_414610.1" /db_xref="GI:16128062" /db_xref="ASAP:ABE-0000249" /db_xref="UniProtKB/Swiss-Prot:P31550" /db_xref="ECOCYC:EG11574" /db_xref="EcoGene:EG11574" /db_xref="GeneID:946306" /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAF EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP TGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR" mat_peptide complement(74500..75426) /gene="thiB" /locus_tag="b0068" /gene_synonym="ECK0069; JW0067; sfuA; tbpA; yabL" /product="thiamin transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 12182833" gene complement(75644..77299) /gene="sgrR" /locus_tag="b0069" /gene_synonym="ECK0070; JW0068; yabN" /db_xref="ECOCYC:EG12094" /db_xref="EcoGene:EG12094" /db_xref="GeneID:944788" CDS complement(75644..77299) /gene="sgrR" /locus_tag="b0069" /gene_synonym="ECK0070; JW0068; yabN" /function="transport; Not classified" /GO_component="GO:0042597 - periplasmic space" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="transcriptional DNA-binding transcriptional activator of sgrS sRNA" /protein_id="NP_414611.1" /db_xref="GI:16128063" /db_xref="ASAP:ABE-0000251" /db_xref="UniProtKB/Swiss-Prot:P33595" /db_xref="ECOCYC:EG12094" /db_xref="EcoGene:EG12094" /db_xref="GeneID:944788" /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN STNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG CYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIES DIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA SKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP" gene 77367..77593 /gene="sgrS" /locus_tag="b4577" /gene_synonym="ECK0071; JWR0259; ryaA" /db_xref="ECOCYC:G0-9941" /db_xref="EcoGene:EG31149" /db_xref="GeneID:4056038" ncRNA 77367..77593 /gene="sgrS" /locus_tag="b4577" /gene_synonym="ECK0071; JWR0259; ryaA" /ncRNA_class="antisense_RNA" /product="sRNA antisense regulator destabilzes ptsG mRNA, Hfq-dependent; regulated by sgrR" /db_xref="ASAP:ABE-0285090" /db_xref="ECOCYC:G0-9941" /db_xref="EcoGene:EG31149" /db_xref="GeneID:4056038" gene 77388..77519 /gene="sgrT" /locus_tag="b4662" /gene_synonym="ECK4477" /db_xref="EcoGene:EG14467" /db_xref="GeneID:7751624" CDS 77388..77519 /gene="sgrT" /locus_tag="b4662" /gene_synonym="ECK4477" /codon_start=1 /transl_table=11 /product="Inhibitor of glucose uptake" /protein_id="YP_002791237.1" /db_xref="GI:226524697" /db_xref="EcoGene:EG14467" /db_xref="GeneID:7751624" /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES" gene 77621..78799 /gene="setA" /locus_tag="b0070" /gene_synonym="ECK0072; JW0069; yabM" /db_xref="ECOCYC:EG11754" /db_xref="EcoGene:EG11754" /db_xref="GeneID:944793" CDS 77621..78799 /gene="setA" /locus_tag="b0070" /gene_synonym="ECK0072; JW0069; yabM" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0015543 - lactose/glucose efflux transporter activity" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="broad specificity sugar efflux system" /protein_id="YP_025293.1" /db_xref="GI:49175994" /db_xref="ASAP:ABE-0000257" /db_xref="UniProtKB/Swiss-Prot:P31675" /db_xref="ECOCYC:EG11754" /db_xref="EcoGene:EG11754" /db_xref="GeneID:944793" /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV GAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRH YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPL AFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVR MLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVK RYGKRRMMVIAVAAGVLFYTGLIFFNSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMP GRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV" gene complement(78848..79453) /gene="leuD" /locus_tag="b0071" /gene_synonym="ECK0073; JW0070" /db_xref="ECOCYC:EG11575" /db_xref="EcoGene:EG11575" /db_xref="GeneID:945642" CDS complement(78848..79453) /gene="leuD" /locus_tag="b0071" /gene_synonym="ECK0073; JW0070" /EC_number="4.2.1.33" /function="enzyme; Amino acid biosynthesis: Leucine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009098 - leucine biosynthetic process" /note="isopropylmalate isomerase subunit" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase small subunit" /protein_id="NP_414613.1" /db_xref="GI:16128065" /db_xref="ASAP:ABE-0000259" /db_xref="UniProtKB/Swiss-Prot:P30126" /db_xref="ECOCYC:EG11575" /db_xref="EcoGene:EG11575" /db_xref="GeneID:945642" /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN" mat_peptide complement(78851..79450) /gene="leuD" /locus_tag="b0071" /gene_synonym="ECK0073; JW0070" /product="3-isopropylmalate dehydratase small subunit" /experiment="N-terminus verified by Edman degradation: PMID 9600841" gene complement(79464..80864) /gene="leuC" /locus_tag="b0072" /gene_synonym="ECK0074; JW0071" /db_xref="ECOCYC:EG11576" /db_xref="EcoGene:EG11576" /db_xref="GeneID:945076" CDS complement(79464..80864) /gene="leuC" /locus_tag="b0072" /gene_synonym="ECK0074; JW0071" /EC_number="4.2.1.33" /function="enzyme; Amino acid biosynthesis: Leucine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009098 - leucine biosynthetic process" /note="3-isopropylmalate isomerase (dehydratase) subunit" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase large subunit" /protein_id="NP_414614.1" /db_xref="GI:16128066" /db_xref="ASAP:ABE-0000261" /db_xref="UniProtKB/Swiss-Prot:P0A6A6" /db_xref="ECOCYC:EG11576" /db_xref="EcoGene:EG11576" /db_xref="GeneID:945076" /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA AAAAVTGHFADIRNIK" mat_peptide complement(79467..80861) /gene="leuC" /locus_tag="b0072" /gene_synonym="ECK0074; JW0071" /product="3-isopropylmalate dehydratase large subunit" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" gene complement(80867..81958) /gene="leuB" /locus_tag="b0073" /gene_synonym="ECK0075; JW5807" /db_xref="ECOCYC:EG11577" /db_xref="EcoGene:EG11577" /db_xref="GeneID:944798" CDS complement(80867..81958) /gene="leuB" /locus_tag="b0073" /gene_synonym="ECK0075; JW5807" /EC_number="1.1.1.85" /function="enzyme; Amino acid biosynthesis: Leucine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="NP_414615.4" /db_xref="GI:90111082" /db_xref="ASAP:ABE-0000265" /db_xref="UniProtKB/Swiss-Prot:P30125" /db_xref="ECOCYC:EG11577" /db_xref="EcoGene:EG11577" /db_xref="GeneID:944798" /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG FGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI RTGDLARGAAAVSTDEMGDIIARYVAEGV" mat_peptide complement(80870..81955) /gene="leuB" /locus_tag="b0073" /gene_synonym="ECK0075; JW5807" /product="3-isopropylmalate dehydrogenase" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene complement(81958..83529) /gene="leuA" /locus_tag="b0074" /gene_synonym="ECK0076; JW0073" /db_xref="ECOCYC:EG11226" /db_xref="EcoGene:EG11226" /db_xref="GeneID:947465" CDS complement(81958..83529) /gene="leuA" /locus_tag="b0074" /gene_synonym="ECK0076; JW0073" /EC_number="2.3.3.13" /function="enzyme; Amino acid biosynthesis: Leucine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="NP_414616.1" /db_xref="GI:16128068" /db_xref="ASAP:ABE-0000267" /db_xref="UniProtKB/Swiss-Prot:P09151" /db_xref="ECOCYC:EG11226" /db_xref="EcoGene:EG11226" /db_xref="GeneID:947465" /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITEYNVELVKYS LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE LQRKAQHNENNKETV" mat_peptide complement(81961..83526) /gene="leuA" /locus_tag="b0074" /gene_synonym="ECK0076; JW0073" /product="2-isopropylmalate synthase" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene complement(83622..83708) /gene="leuL" /locus_tag="b0075" /gene_synonym="ECK0077; JW0074; leuLP" /db_xref="ECOCYC:EG11280" /db_xref="EcoGene:EG11280" /db_xref="GeneID:946072" CDS complement(83622..83708) /gene="leuL" /locus_tag="b0075" /gene_synonym="ECK0077; JW0074; leuLP" /function="leader; Amino acid biosynthesis: Leucine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="leu operon leader peptide" /protein_id="NP_414617.1" /db_xref="GI:16128069" /db_xref="ASAP:ABE-0000269" /db_xref="UniProtKB/Swiss-Prot:P0AD79" /db_xref="ECOCYC:EG11280" /db_xref="EcoGene:EG11280" /db_xref="GeneID:946072" /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH" gene 84368..85312 /gene="leuO" /locus_tag="b0076" /gene_synonym="ECK0078; JW0075" /db_xref="ECOCYC:EG10531" /db_xref="EcoGene:EG10531" /db_xref="GeneID:949034" CDS 84368..85312 /gene="leuO" /locus_tag="b0076" /gene_synonym="ECK0078; JW0075" /function="putative regulator; Amino acid biosynthesis: Leucine" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0009098 - leucine biosynthetic process; GO:0006350 - transcription" /note="probable transcriptional activator for leuABCD operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator" /protein_id="NP_414618.4" /db_xref="GI:90111083" /db_xref="ASAP:ABE-0000280" /db_xref="UniProtKB/Swiss-Prot:P10151" /db_xref="ECOCYC:EG10531" /db_xref="EcoGene:EG10531" /db_xref="GeneID:949034" /translation="MPEVQTDHPETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL PLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR" gene 85630..87354 /gene="ilvI" /locus_tag="b0077" /gene_synonym="ECK0079; JW0076" /db_xref="ECOCYC:EG10500" /db_xref="EcoGene:EG10500" /db_xref="GeneID:948793" CDS 85630..87354 /gene="ilvI" /locus_tag="b0077" /gene_synonym="ECK0079; JW0076" /EC_number="2.2.1.6" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="acetolactate synthase III, valine sensitive, large subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase III, large subunit" /protein_id="YP_025294.2" /db_xref="GI:90111084" /db_xref="ASAP:ABE-0000290" /db_xref="UniProtKB/Swiss-Prot:P00893" /db_xref="ECOCYC:EG10500" /db_xref="EcoGene:EG10500" /db_xref="GeneID:948793" /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAI TAGCHQQLKETVEALNLPVVCSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLEL LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM WLSKTERT" gene 87357..87848 /gene="ilvH" /locus_tag="b0078" /gene_synonym="brnP; ECK0080; JW0077" /db_xref="ECOCYC:EG10499" /db_xref="EcoGene:EG10499" /db_xref="GeneID:947267" CDS 87357..87848 /gene="ilvH" /locus_tag="b0078" /gene_synonym="brnP; ECK0080; JW0077" /EC_number="2.2.1.6" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /note="acetolactate synthase III, valine sensitive, small subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase III, thiamin-dependent, small subunit" /protein_id="NP_414620.1" /db_xref="GI:16128071" /db_xref="ASAP:ABE-0000294" /db_xref="UniProtKB/Swiss-Prot:P00894" /db_xref="ECOCYC:EG10499" /db_xref="EcoGene:EG10499" /db_xref="GeneID:947267" /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK RNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDK IMR" gene 88028..89032 /gene="fruR" /locus_tag="b0080" /gene_synonym="cra; ECK0081; fruC; fruS?; JW0078; serR?; shl" /db_xref="ECOCYC:EG10338" /db_xref="EcoGene:EG10338" /db_xref="GeneID:944804" CDS 88028..89032 /gene="fruR" /locus_tag="b0080" /gene_synonym="cra; ECK0081; fruC; fruS?; JW0078; serR?; shl" /function="regulator; Energy metabolism, carbon: Glycolysis" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006096 - glycolysis; GO:0006350 - transcription" /note="transcriptional repressor of fru operon and others" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator" /protein_id="NP_414622.1" /db_xref="GI:16128073" /db_xref="ASAP:ABE-0000299" /db_xref="UniProtKB/Swiss-Prot:P0ACP1" /db_xref="ECOCYC:EG10338" /db_xref="EcoGene:EG10338" /db_xref="GeneID:944804" /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS" gene 89634..90092 /gene="mraZ" /locus_tag="b0081" /gene_synonym="ECK0082; JW0079; yabB" /db_xref="ECOCYC:EG11084" /db_xref="EcoGene:EG11084" /db_xref="GeneID:944810" CDS 89634..90092 /gene="mraZ" /locus_tag="b0081" /gene_synonym="ECK0082; JW0079; yabB" /codon_start=1 /transl_table=11 /product="conserved protein, MraZ family" /protein_id="NP_414623.1" /db_xref="GI:16128074" /db_xref="ASAP:ABE-0000302" /db_xref="UniProtKB/Swiss-Prot:P22186" /db_xref="ECOCYC:EG11084" /db_xref="EcoGene:EG11084" /db_xref="GeneID:944810" /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIYHPC LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL" gene 90094..91035 /gene="rsmH" /locus_tag="b0082" /gene_synonym="ECK0083; JW0080; mraW; yabC" /db_xref="ECOCYC:EG11085" /db_xref="EcoGene:EG11085" /db_xref="GeneID:944806" CDS 90094..91035 /gene="rsmH" /locus_tag="b0082" /gene_synonym="ECK0083; JW0080; mraW; yabC" /EC_number="2.1.1.-" /experiment="N-terminus verified by Edman degradation: PMID 10572301" /GO_process="GO:0042158 - lipoprotein biosynthetic process" /note="putative apolipoprotein" /codon_start=1 /transl_table=11 /product="16S rRNA m(4)C1402 methyltranserfase, SAM-dependent" /protein_id="NP_414624.1" /db_xref="GI:16128075" /db_xref="ASAP:ABE-0000304" /db_xref="UniProtKB/Swiss-Prot:P60390" /db_xref="ECOCYC:EG11085" /db_xref="EcoGene:EG11085" /db_xref="GeneID:944806" /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA" gene 91032..91397 /gene="ftsL" /locus_tag="b0083" /gene_synonym="ECK0084; JW0081; mraR; yabD" /db_xref="ECOCYC:EG11086" /db_xref="EcoGene:EG11086" /db_xref="GeneID:944803" CDS 91032..91397 /gene="ftsL" /locus_tag="b0083" /gene_synonym="ECK0084; JW0081; mraR; yabD" /function="phenotype; Cell division" /note="cell division protein; ingrowth of wall at septum" /codon_start=1 /transl_table=11 /product="membrane bound cell division protein at septum containing leucine zipper motif" /protein_id="NP_414625.1" /db_xref="GI:16128076" /db_xref="ASAP:ABE-0000306" /db_xref="UniProtKB/Swiss-Prot:P0AEN4" /db_xref="ECOCYC:EG11086" /db_xref="EcoGene:EG11086" /db_xref="GeneID:944803" /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT EKLQMQHVDPSQENIVVQK" gene 91413..93179 /gene="ftsI" /locus_tag="b0084" /gene_synonym="ECK0085; JW0082; pbpB; sep" /db_xref="ECOCYC:EG10341" /db_xref="EcoGene:EG10341" /db_xref="GeneID:944799" CDS 91413..93179 /gene="ftsI" /locus_tag="b0084" /gene_synonym="ECK0085; JW0082; pbpB; sep" /function="enzyme; Cell division" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process; GO:0042493 - response to drug" /note="septum formation; penicillin-binding protein 3; peptidoglycan synthetase" /codon_start=1 /transl_table=11 /product="transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3)" /protein_id="NP_414626.1" /db_xref="GI:16128077" /db_xref="ASAP:ABE-0000309" /db_xref="UniProtKB/Swiss-Prot:P0AD68" /db_xref="ECOCYC:EG10341" /db_xref="EcoGene:EG10341" /db_xref="GeneID:944799" /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD ALTTGDKNEFVINQGEGTGGRS" gene 93166..94653 /gene="murE" /locus_tag="b0085" /gene_synonym="ECK0086; JW0083" /db_xref="ECOCYC:EG10621" /db_xref="EcoGene:EG10621" /db_xref="GeneID:944791" CDS 93166..94653 /gene="murE" /locus_tag="b0085" /gene_synonym="ECK0086; JW0083" /EC_number="6.3.2.13" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase" /protein_id="NP_414627.1" /db_xref="GI:16128078" /db_xref="ASAP:ABE-0000311" /db_xref="UniProtKB/Swiss-Prot:P22188" /db_xref="ECOCYC:EG10621" /db_xref="EcoGene:EG10621" /db_xref="GeneID:944791" /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTG SAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKA TEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAA RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA" mat_peptide 93169..94650 /gene="murE" /locus_tag="b0085" /gene_synonym="ECK0086; JW0083" /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase" /experiment="N-terminus verified by Edman degradation: PMID 2198024,2269304" gene 94650..96008 /gene="murF" /locus_tag="b0086" /gene_synonym="ECK0087; JW0084; mra" /db_xref="ECOCYC:EG10622" /db_xref="EcoGene:EG10622" /db_xref="GeneID:944813" CDS 94650..96008 /gene="murF" /locus_tag="b0086" /gene_synonym="ECK0087; JW0084; mra" /EC_number="6.3.2.10" /function="enzyme; Murein sacculus, peptidoglycan" /function="1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)" /function="1.7.34 metabolism; central intermediary metabolism; peptidoglycan (murein)" /function="1.7.34 metabolism; central intermediary metabolism; peptidoglycan (murein) turnover, recycling" /function="7.1 location of gene products; cytoplasm" /experiment="N-terminus verified by Edman degradation: PMID 2186811" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process; GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase" /protein_id="NP_414628.1" /db_xref="GI:16128079" /db_xref="ASAP:ABE-0000313" /db_xref="UniProtKB/Swiss-Prot:P11880" /db_xref="ECOCYC:EG10622" /db_xref="EcoGene:EG10622" /db_xref="GeneID:944813" /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK QSHAISTASGVGEHFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRALQENG TC" gene 96002..97084 /gene="mraY" /locus_tag="b0087" /gene_synonym="ECK0088; JW0085; murX" /db_xref="ECOCYC:EG10604" /db_xref="EcoGene:EG10604" /db_xref="GeneID:944814" CDS 96002..97084 /gene="mraY" /locus_tag="b0087" /gene_synonym="ECK0088; JW0085; murX" /EC_number="2.7.8.13" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /note="phospho-N-acetylmuramoyl-pentapeptide transferase?" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide transferase" /protein_id="NP_414629.1" /db_xref="GI:16128080" /db_xref="ASAP:ABE-0000316" /db_xref="UniProtKB/Swiss-Prot:P0A6W3" /db_xref="ECOCYC:EG10604" /db_xref="EcoGene:EG10604" /db_xref="GeneID:944814" /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP EPRVIVRFWIISLMLVLIGLATLKVR" gene 97087..98403 /gene="murD" /locus_tag="b0088" /gene_synonym="ECK0089; JW0086" /db_xref="ECOCYC:EG10620" /db_xref="EcoGene:EG10620" /db_xref="GeneID:944818" CDS 97087..98403 /gene="murD" /locus_tag="b0088" /gene_synonym="ECK0089; JW0086" /EC_number="6.3.2.9" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase" /protein_id="NP_414630.1" /db_xref="GI:16128081" /db_xref="ASAP:ABE-0000318" /db_xref="UniProtKB/Swiss-Prot:P14900" /db_xref="ECOCYC:EG10620" /db_xref="EcoGene:EG10620" /db_xref="GeneID:944818" /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELS SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL HVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG" mat_peptide 97090..98400 /gene="murD" /locus_tag="b0088" /gene_synonym="ECK0089; JW0086" /product="UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase" /experiment="N-terminus verified by Edman degradation: PMID 1765076" gene 98403..99647 /gene="ftsW" /locus_tag="b0089" /gene_synonym="ECK0090; JW0087" /db_xref="ECOCYC:EG10344" /db_xref="EcoGene:EG10344" /db_xref="GeneID:946322" CDS 98403..99647 /gene="ftsW" /locus_tag="b0089" /gene_synonym="ECK0090; JW0087" /function="membrane; Cell division" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="cell division; membrane protein involved in shape determination" /codon_start=1 /transl_table=11 /product="integral membrane protein involved in stabilizing FstZ ring during cell division" /protein_id="NP_414631.1" /db_xref="GI:16128082" /db_xref="ASAP:ABE-0000320" /db_xref="UniProtKB/Swiss-Prot:P0ABG4" /db_xref="ECOCYC:EG10344" /db_xref="EcoGene:EG10344" /db_xref="GeneID:946322" /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM MLLRIDYETRLEKAQAFVRGSR" gene 99644..100711 /gene="murG" /locus_tag="b0090" /gene_synonym="ECK0091; JW0088" /db_xref="ECOCYC:EG10623" /db_xref="EcoGene:EG10623" /db_xref="GeneID:946321" CDS 99644..100711 /gene="murG" /locus_tag="b0090" /gene_synonym="ECK0091; JW0088" /EC_number="2.4.1.227" /function="enzyme; Murein sacculus, peptidoglycan" /function="1.6.7 metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)" /function="7.3 location of gene products; inner membrane" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylglucosaminyl transferase" /protein_id="NP_414632.1" /db_xref="GI:16128083" /db_xref="ASAP:ABE-0000322" /db_xref="UniProtKB/Swiss-Prot:P17443" /db_xref="ECOCYC:EG10623" /db_xref="EcoGene:EG10623" /db_xref="GeneID:946321" /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR AASIPDATERVANEVSRVARA" mat_peptide 99647..100708 /gene="murG" /locus_tag="b0090" /gene_synonym="ECK0091; JW0088" /product="N-acetylglucosaminyl transferase" /experiment="N-terminus verified by Edman degradation: PMID 1649817" gene 100765..102240 /gene="murC" /locus_tag="b0091" /gene_synonym="ECK0092; JW0089" /db_xref="ECOCYC:EG10619" /db_xref="EcoGene:EG10619" /db_xref="GeneID:946153" CDS 100765..102240 /gene="murC" /locus_tag="b0091" /gene_synonym="ECK0092; JW0089" /EC_number="6.3.2.8" /function="enzyme; Murein sacculus, peptidoglycan" /experiment="N-terminus verified by Edman degradation: PMID 7601127" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate:L-alanine ligase" /protein_id="NP_414633.1" /db_xref="GI:16128084" /db_xref="ASAP:ABE-0000324" /db_xref="UniProtKB/Swiss-Prot:P17952" /db_xref="ECOCYC:EG10619" /db_xref="EcoGene:EG10619" /db_xref="GeneID:946153" /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEF PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPARVAEML APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD" gene 102233..103153 /gene="ddlB" /locus_tag="b0092" /gene_synonym="ddl; ECK0093; JW0090" /db_xref="ECOCYC:EG10214" /db_xref="EcoGene:EG10214" /db_xref="GeneID:946324" CDS 102233..103153 /gene="ddlB" /locus_tag="b0092" /gene_synonym="ddl; ECK0093; JW0090" /EC_number="6.3.2.4" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /note="D-alanine-D-alanine ligase B, affects cell division" /codon_start=1 /transl_table=11 /product="D-alanine:D-alanine ligase" /protein_id="NP_414634.1" /db_xref="GI:16128085" /db_xref="ASAP:ABE-0000326" /db_xref="UniProtKB/Swiss-Prot:P07862" /db_xref="ECOCYC:EG10214" /db_xref="EcoGene:EG10214" /db_xref="GeneID:946324" /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS DETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG MTSHSLVPMAARQAGMSFSQLVVRILELAD" mat_peptide 102236..103150 /gene="ddlB" /locus_tag="b0092" /gene_synonym="ddl; ECK0093; JW0090" /product="D-alanine:D-alanine ligase" /experiment="N-terminus verified by Edman degradation: PMID 1554356" gene 103155..103985 /gene="ftsQ" /locus_tag="b0093" /gene_synonym="ECK0094; JW0091" /db_xref="ECOCYC:EG10342" /db_xref="EcoGene:EG10342" /db_xref="GeneID:944823" CDS 103155..103985 /gene="ftsQ" /locus_tag="b0093" /gene_synonym="ECK0094; JW0091" /function="phenotype; Cell division" /GO_component="GO:0019866 - organelle inner membrane" /note="cell division protein; ingrowth of wall at septum" /codon_start=1 /transl_table=11 /product="Divisome assembly protein, membrane anchored protein involved in growth of wall at septum" /protein_id="NP_414635.1" /db_xref="GI:16128086" /db_xref="ASAP:ABE-0000329" /db_xref="UniProtKB/Swiss-Prot:P06136" /db_xref="ECOCYC:EG10342" /db_xref="EcoGene:EG10342" /db_xref="GeneID:944823" /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPERTSKQVLPML YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ" gene 103982..105244 /gene="ftsA" /locus_tag="b0094" /gene_synonym="divA; ECK0095; JW0092" /db_xref="ECOCYC:EG10339" /db_xref="EcoGene:EG10339" /db_xref="GeneID:944778" CDS 103982..105244 /gene="ftsA" /locus_tag="b0094" /gene_synonym="divA; ECK0095; JW0092" /function="phenotype; Cell division" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes" /codon_start=1 /transl_table=11 /product="ATP-binding cell division protein involved in recruitment of FtsK to Z ring" /protein_id="NP_414636.1" /db_xref="GI:16128087" /db_xref="ASAP:ABE-0000331" /db_xref="UniProtKB/Swiss-Prot:P0ABH0" /db_xref="ECOCYC:EG10339" /db_xref="EcoGene:EG10339" /db_xref="GeneID:944778" /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN GEAEVEKRVTASVGSWIKRLNSWLRKEF" gene 105305..106456 /gene="ftsZ" /locus_tag="b0095" /gene_synonym="ECK0096; JW0093; sfiB; sulB" /db_xref="ECOCYC:EG10347" /db_xref="EcoGene:EG10347" /db_xref="GeneID:944786" CDS 105305..106456 /gene="ftsZ" /locus_tag="b0095" /gene_synonym="ECK0096; JW0093; sfiB; sulB" /function="enzyme; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /GO_component="GO:0005737 - cytoplasm" /note="cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase" /codon_start=1 /transl_table=11 /product="GTP-binding tubulin-like cell division protein" /protein_id="NP_414637.1" /db_xref="GI:16128088" /db_xref="ASAP:ABE-0000333" /db_xref="UniProtKB/Swiss-Prot:P0A9A6" /db_xref="ECOCYC:EG10347" /db_xref="EcoGene:EG10347" /db_xref="GeneID:944786" /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD" gene 106557..107474 /gene="lpxC" /locus_tag="b0096" /gene_synonym="asmB; ECK0097; envA; JW0094" /db_xref="ECOCYC:EG10265" /db_xref="EcoGene:EG10265" /db_xref="GeneID:944816" CDS 106557..107474 /gene="lpxC" /locus_tag="b0096" /gene_synonym="asmB; ECK0097; envA; JW0094" /EC_number="3.5.1.-" /function="enzyme; Surface polysaccharides & antigens" /experiment="N-terminus verified by Edman degradation: PMID 8530464" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009245 - lipid A biosynthetic process" /note="UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis" /codon_start=1 /transl_table=11 /product="UDP-3-O-acyl N-acetylglucosamine deacetylase" /protein_id="NP_414638.1" /db_xref="GI:16128089" /db_xref="ASAP:ABE-0000336" /db_xref="UniProtKB/Swiss-Prot:P0A725" /db_xref="ECOCYC:EG10265" /db_xref="EcoGene:EG10265" /db_xref="GeneID:944816" /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL AKQEAWEYVTFQDDAELPLAFKAPSAVLA" gene 107705..108217 /gene="secM" /locus_tag="b0097" /gene_synonym="ECK0098; JW5007; srrA; yacA" /db_xref="ECOCYC:EG11087" /db_xref="EcoGene:EG11087" /db_xref="GeneID:944831" CDS 107705..108217 /gene="secM" /locus_tag="b0097" /gene_synonym="ECK0098; JW5007; srrA; yacA" /codon_start=1 /transl_table=11 /product="regulator of secA translation" /protein_id="NP_414639.2" /db_xref="GI:90111085" /db_xref="ASAP:ABE-0000340" /db_xref="UniProtKB/Swiss-Prot:P62395" /db_xref="ECOCYC:EG11087" /db_xref="EcoGene:EG11087" /db_xref="GeneID:944831" /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPA KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTL PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ GIRAGPQRLT" gene 108279..110984 /gene="secA" /locus_tag="b0098" /gene_synonym="azi; ECK0099; JW0096; pea; prlD" /db_xref="ECOCYC:EG10936" /db_xref="EcoGene:EG10936" /db_xref="GeneID:944821" CDS 108279..110984 /gene="secA" /locus_tag="b0098" /gene_synonym="azi; ECK0099; JW0096; pea; prlD" /function="transport; Protein, peptide secretion" /experiment="N-terminus verified by Edman degradation: PMID 2841285" /GO_component="GO:0005737 - cytoplasm" /note="preprotein translocase; secretion protein" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit, ATPase" /protein_id="NP_414640.1" /db_xref="GI:16128091" /db_xref="ASAP:ABE-0000343" /db_xref="UniProtKB/Swiss-Prot:P10408" /db_xref="ECOCYC:EG10936" /db_xref="EcoGene:EG10936" /db_xref="GeneID:944821" /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ" gene 111044..111433 /gene="mutT" /locus_tag="b0099" /gene_synonym="ECK0100; JW0097; nudA" /db_xref="ECOCYC:EG10626" /db_xref="EcoGene:EG10626" /db_xref="GeneID:944824" CDS 111044..111433 /gene="mutT" /locus_tag="b0099" /gene_synonym="ECK0100; JW0097; nudA" /EC_number="3.6.1.-" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /experiment="N-terminus verified by Edman degradation: PMID 3288626" /GO_component="GO:0005737 - cytoplasm" /note="7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions" /codon_start=1 /transl_table=11 /product="nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP" /protein_id="NP_414641.1" /db_xref="GI:16128092" /db_xref="ASAP:ABE-0000346" /db_xref="UniProtKB/Swiss-Prot:P08337" /db_xref="ECOCYC:EG10626" /db_xref="EcoGene:EG10626" /db_xref="GeneID:944824" /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERWEGEPWGKEGQPG EWMSLVGLNADDFPPANEPVIAKLKRL" repeat_region 111430..111629 /note="RIP8 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site" gene complement(111649..111846) /gene="yacG" /locus_tag="b0101" /gene_synonym="ECK0101; JW5008" /db_xref="ECOCYC:EG12314" /db_xref="EcoGene:EG12314" /db_xref="GeneID:945630" CDS complement(111649..111846) /gene="yacG" /locus_tag="b0101" /gene_synonym="ECK0101; JW5008" /codon_start=1 /transl_table=11 /product="DNA gyrase inhibitor" /protein_id="NP_414643.1" /db_xref="GI:16128094" /db_xref="ASAP:ABE-0000351" /db_xref="UniProtKB/Swiss-Prot:P0A8H8" /db_xref="ECOCYC:EG12314" /db_xref="EcoGene:EG12314" /db_xref="GeneID:945630" /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE KRIPSSGDLSESDDWSEEPKQ" gene complement(111856..112599) /gene="yacF" /locus_tag="b0102" /gene_synonym="ECK0102; JW0099" /db_xref="ECOCYC:EG12313" /db_xref="EcoGene:EG12313" /db_xref="GeneID:944873" CDS complement(111856..112599) /gene="yacF" /locus_tag="b0102" /gene_synonym="ECK0102; JW0099" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414644.1" /db_xref="GI:16128095" /db_xref="ASAP:ABE-0000355" /db_xref="UniProtKB/Swiss-Prot:P36680" /db_xref="ECOCYC:EG12313" /db_xref="EcoGene:EG12313" /db_xref="GeneID:944873" /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH KSRFAIRFMPLDTENGQVPERLDFELACC" gene complement(112599..113219) /gene="coaE" /locus_tag="b0103" /gene_synonym="ECK0103; JW0100; yacE" /db_xref="ECOCYC:EG12312" /db_xref="EcoGene:EG12312" /db_xref="GeneID:949060" CDS complement(112599..113219) /gene="coaE" /locus_tag="b0103" /gene_synonym="ECK0103; JW0100; yacE" /EC_number="2.7.1.24" /function="orf; Not classified" /note="putative DNA repair protein" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="NP_414645.1" /db_xref="GI:16128096" /db_xref="ASAP:ABE-0000357" /db_xref="UniProtKB/Swiss-Prot:P0A6I9" /db_xref="ECOCYC:EG12312" /db_xref="EcoGene:EG12312" /db_xref="GeneID:949060" /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP" gene 113444..114487 /gene="guaC" /locus_tag="b0104" /gene_synonym="ECK0104; JW0101" /db_xref="ECOCYC:EG10422" /db_xref="EcoGene:EG10422" /db_xref="GeneID:948986" CDS 113444..114487 /gene="guaC" /locus_tag="b0104" /gene_synonym="ECK0104; JW0101" /EC_number="1.7.1.7" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO:0009152 - purine ribonucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="GMP reductase" /protein_id="NP_414646.1" /db_xref="GI:16128097" /db_xref="ASAP:ABE-0000362" /db_xref="UniProtKB/Swiss-Prot:P60560" /db_xref="ECOCYC:EG10422" /db_xref="EcoGene:EG10422" /db_xref="GeneID:948986" /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSW SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI RVQEQENRIFNNL" gene complement(114522..115724) /gene="hofC" /locus_tag="b0106" /gene_synonym="ECK0105; hopC; JW0102; yacD" /db_xref="ECOCYC:EG11798" /db_xref="EcoGene:EG11798" /db_xref="GeneID:945806" CDS complement(114522..115724) /gene="hofC" /locus_tag="b0106" /gene_synonym="ECK0105; hopC; JW0102; yacD" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" /codon_start=1 /transl_table=11 /product="assembly protein in type IV pilin biogenesis, transmembrane protein" /protein_id="NP_414648.1" /db_xref="GI:16128099" /db_xref="ASAP:ABE-0000366" /db_xref="UniProtKB/Swiss-Prot:P36646" /db_xref="ECOCYC:EG11798" /db_xref="EcoGene:EG11798" /db_xref="GeneID:945806" /translation="MASKQLWRWHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLS LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGQPIWLALKNTGEFSPLCLQLVRTG EASGSLDLMLDNLAHHHRENTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL GDAMSGMG" gene complement(115714..117099) /gene="hofB" /locus_tag="b0107" /gene_synonym="ECK0106; hopB; JW0103" /db_xref="ECOCYC:EG12106" /db_xref="EcoGene:EG12106" /db_xref="GeneID:947481" CDS complement(115714..117099) /gene="hofB" /locus_tag="b0107" /gene_synonym="ECK0106; hopB; JW0103" /function="putative transport; Not classified" /GO_component="GO:0009289 - pilus" /note="putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" /codon_start=1 /transl_table=11 /product="conserved protein with nucleoside triphosphate hydrolase domain" /protein_id="NP_414649.1" /db_xref="GI:16128100" /db_xref="ASAP:ABE-0000370" /db_xref="UniProtKB/Swiss-Prot:P36645" /db_xref="ECOCYC:EG12106" /db_xref="EcoGene:EG12106" /db_xref="GeneID:947481" /translation="MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFA TTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHI EPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVEL AGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLV LVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGV LRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVA RWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGF YGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEE LIRVLGMPHGE" gene complement(117109..117549) /gene="ppdD" /locus_tag="b0108" /gene_synonym="ECK0107; JW0104" /db_xref="ECOCYC:EG12107" /db_xref="EcoGene:EG12107" /db_xref="GeneID:945817" CDS complement(117109..117549) /gene="ppdD" /locus_tag="b0108" /gene_synonym="ECK0107; JW0104" /function="putative enzyme; Not classified" /GO_component="GO:0009289 - pilus" /note="prelipin peptidase dependent protein" /codon_start=1 /transl_table=11 /product="predicted major pilin subunit" /protein_id="NP_414650.1" /db_xref="GI:16128101" /db_xref="ASAP:ABE-0000372" /db_xref="UniProtKB/Swiss-Prot:P36647" /db_xref="ECOCYC:EG12107" /db_xref="EcoGene:EG12107" /db_xref="GeneID:945817" /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ TFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNG LSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN" gene complement(117752..118645) /gene="nadC" /locus_tag="b0109" /gene_synonym="ECK0108; JW0105" /db_xref="ECOCYC:EG11546" /db_xref="EcoGene:EG11546" /db_xref="GeneID:948869" CDS complement(117752..118645) /gene="nadC" /locus_tag="b0109" /gene_synonym="ECK0108; JW0105" /EC_number="2.4.2.19" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /GO_process="GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="quinolinate phosphoribosyltransferase" /protein_id="NP_414651.1" /db_xref="GI:16128102" /db_xref="ASAP:ABE-0000374" /db_xref="UniProtKB/Swiss-Prot:P30011" /db_xref="ECOCYC:EG11546" /db_xref="EcoGene:EG11546" /db_xref="GeneID:948869" /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ SLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD FISVGALTKHVQALDLSMRFR" gene 118733..119284 /gene="ampD" /locus_tag="b0110" /gene_synonym="ECK0109; JW0106" /db_xref="ECOCYC:EG10041" /db_xref="EcoGene:EG10041" /db_xref="GeneID:948877" CDS 118733..119284 /gene="ampD" /locus_tag="b0110" /gene_synonym="ECK0109; JW0106" /EC_number="3.5.1.28" /function="regulator; Not classified" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0000270 - peptidoglycan metabolic process" /note="regulates ampC" /codon_start=1 /transl_table=11 /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase" /protein_id="NP_414652.1" /db_xref="GI:16128103" /db_xref="ASAP:ABE-0000380" /db_xref="UniProtKB/Swiss-Prot:P13016" /db_xref="ECOCYC:EG10041" /db_xref="EcoGene:EG10041" /db_xref="GeneID:948877" /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPD RKTDPGPAFDWARFRVLVSKETT" gene 119281..120135 /gene="ampE" /locus_tag="b0111" /gene_synonym="ECK0110; JW0107" /db_xref="ECOCYC:EG10042" /db_xref="EcoGene:EG10042" /db_xref="GeneID:946678" CDS 119281..120135 /gene="ampE" /locus_tag="b0111" /gene_synonym="ECK0110; JW0107" /function="regulator; Drug/analog sensitivity" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="regulates ampC" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein" /protein_id="NP_414653.1" /db_xref="GI:16128104" /db_xref="ASAP:ABE-0000382" /db_xref="UniProtKB/Swiss-Prot:P0AE14" /db_xref="ECOCYC:EG10042" /db_xref="EcoGene:EG10042" /db_xref="GeneID:946678" /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND SHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPV TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL LTIYGALV" gene complement(120178..121551) /gene="aroP" /locus_tag="b0112" /gene_synonym="ECK0111; JW0108" /db_xref="ECOCYC:EG10084" /db_xref="EcoGene:EG10084" /db_xref="GeneID:946018" CDS complement(120178..121551) /gene="aroP" /locus_tag="b0112" /gene_synonym="ECK0111; JW0108" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009094 - L-phenylalanine biosynthetic process; GO:0006571 - tyrosine biosynthetic process" /note="aromatic amino acid transport protein" /codon_start=1 /transl_table=11 /product="aromatic amino acid transporter" /protein_id="NP_414654.1" /db_xref="GI:16128105" /db_xref="ASAP:ABE-0000384" /db_xref="UniProtKB/Swiss-Prot:P15993" /db_xref="ECOCYC:EG10084" /db_xref="EcoGene:EG10084" /db_xref="GeneID:946018" /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK VIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT AKAVKAH" gene 122092..122856 /gene="pdhR" /locus_tag="b0113" /gene_synonym="aceC; ECK0112; genA; JW0109; yacB" /db_xref="ECOCYC:EG11088" /db_xref="EcoGene:EG11088" /db_xref="GeneID:944827" CDS 122092..122856 /gene="pdhR" /locus_tag="b0113" /gene_synonym="aceC; ECK0112; genA; JW0109; yacB" /function="regulator; Energy metabolism, carbon: Pyruvate dehydrogenase" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006096 - glycolysis; GO:0006350 - transcription" /note="transcriptional regulator for pyruvate dehydrogenase complex" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator" /protein_id="NP_414655.1" /db_xref="GI:16128106" /db_xref="ASAP:ABE-0000394" /db_xref="UniProtKB/Swiss-Prot:P0ACL9" /db_xref="ECOCYC:EG11088" /db_xref="EcoGene:EG11088" /db_xref="GeneID:944827" /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN" gene 123017..125680 /gene="aceE" /locus_tag="b0114" /gene_synonym="ECK0113; JW0110" /db_xref="ECOCYC:EG10024" /db_xref="EcoGene:EG10024" /db_xref="GeneID:944834" CDS 123017..125680 /gene="aceE" /locus_tag="b0114" /gene_synonym="ECK0113; JW0110" /EC_number="1.2.4.1" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /GO_process="GO:0006086 - acetyl-CoA biosynthetic process from pyruvate; GO:0009061 - anaerobic respiration; GO:0016052 - carbohydrate catabolic process; GO:0006096 - glycolysis; GO:0009436 - glyoxylate catabolic process" /note="pyruvate dehydrogenase (decarboxylase component)" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding" /protein_id="NP_414656.1" /db_xref="GI:16128107" /db_xref="ASAP:ABE-0000397" /db_xref="UniProtKB/Swiss-Prot:P0AFG8" /db_xref="ECOCYC:EG10024" /db_xref="EcoGene:EG10024" /db_xref="GeneID:944834" /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTI KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE LAKRGEIDKKVVADAIAKFNIDADKVNPRLA" mat_peptide 123020..125677 /gene="aceE" /locus_tag="b0114" /gene_synonym="ECK0113; JW0110" /product="pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene 125695..127587 /gene="aceF" /locus_tag="b0115" /gene_synonym="ECK0114; JW0111" /db_xref="ECOCYC:EG10025" /db_xref="EcoGene:EG10025" /db_xref="GeneID:944794" CDS 125695..127587 /gene="aceF" /locus_tag="b0115" /gene_synonym="ECK0114; JW0111" /EC_number="2.3.1.12" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /GO_process="GO:0006086 - acetyl-CoA biosynthetic process from pyruvate; GO:0009061 - anaerobic respiration; GO:0016052 - carbohydrate catabolic process; GO:0006096 - glycolysis; GO:0009436 - glyoxylate catabolic process" /note="pyruvate dehydrogenase (dihydrolipoyltransacetylase component)" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2" /protein_id="NP_414657.1" /db_xref="GI:16128108" /db_xref="ASAP:ABE-0000400" /db_xref="UniProtKB/Swiss-Prot:P06959" /db_xref="ECOCYC:EG10025" /db_xref="EcoGene:EG10025" /db_xref="GeneID:944794" /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD IRRLVM" mat_peptide 125698..127584 /gene="aceF" /locus_tag="b0115" /gene_synonym="ECK0114; JW0111" /product="pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene 127912..129336 /gene="lpd" /locus_tag="b0116" /gene_synonym="dhl; ECK0115; JW0112; lpdA" /db_xref="ECOCYC:EG10543" /db_xref="EcoGene:EG10543" /db_xref="GeneID:944854" CDS 127912..129336 /gene="lpd" /locus_tag="b0116" /gene_synonym="dhl; ECK0115; JW0112; lpdA" /EC_number="1.8.1.4" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006086 - acetyl-CoA biosynthetic process from pyruvate; GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration; GO:0016052 - carbohydrate catabolic process; GO:0009063 - cellular amino acid catabolic process; GO:0006096 - glycolysis; GO:0009436 - glyoxylate catabolic process; GO:0006099 - tricarboxylic acid cycle" /note="lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex" /codon_start=1 /transl_table=11 /product="lipoamide dehydrogenase, E3 component is part of three enzyme complexes" /protein_id="NP_414658.1" /db_xref="GI:16128109" /db_xref="ASAP:ABE-0000404" /db_xref="UniProtKB/Swiss-Prot:P0A9P0" /db_xref="ECOCYC:EG10543" /db_xref="EcoGene:EG10543" /db_xref="GeneID:944854" /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE SVGLAAEVFEGSITDLPNPKAKKK" mat_peptide 127915..129333 /gene="lpd" /locus_tag="b0116" /gene_synonym="dhl; ECK0115; JW0112; lpdA" /product="lipoamide dehydrogenase, E3 component is part of three enzyme complexes" /experiment="N-terminus verified by Edman degradation: PMID 6352260,9298646" repeat_region 129347..129361 /note="REP9 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(129407..131260) /gene="yacH" /locus_tag="b0117" /gene_synonym="ECK0116; JW0113" /db_xref="ECOCYC:EG12315" /db_xref="EcoGene:EG12315" /db_xref="GeneID:944868" CDS complement(129407..131260) /gene="yacH" /locus_tag="b0117" /gene_synonym="ECK0116; JW0113" /function="putative membrane; Not classified" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414659.1" /db_xref="GI:16128110" /db_xref="ASAP:ABE-0000406" /db_xref="UniProtKB/Swiss-Prot:P36682" /db_xref="ECOCYC:EG12315" /db_xref="EcoGene:EG12315" /db_xref="GeneID:944868" /translation="MKMTLPFKPHVLALICSAGLCAASTGLYIKSRTVEAPVEPQSTQ LAVSDAAAVTFPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY PTNVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKVITTTKKAVPVKQTVTAPVIPSN TVLTANPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP FVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDNDDYHHHDGGHRDGNGWQHN GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA TQLPAPTRDSQRQAAANQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFHDFS RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPKIQQRREAARERIQSASPEQRQ AVREKMQTNPQNQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA SPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVCERLSERGARRLER" gene 131615..134212 /gene="acnB" /locus_tag="b0118" /gene_synonym="ECK0117; JW0114; yacI; yacJ" /db_xref="ECOCYC:EG12316" /db_xref="EcoGene:EG12316" /db_xref="GeneID:944864" CDS 131615..134212 /gene="acnB" /locus_tag="b0118" /gene_synonym="ECK0117; JW0114; yacI; yacJ" /EC_number="4.2.1.3" /EC_number="4.2.1.99" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 8932712,9298646" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration; GO:0006099 - tricarboxylic acid cycle" /note="aconitate hydrase B" /codon_start=1 /transl_table=11 /product="bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase" /protein_id="NP_414660.1" /db_xref="GI:16128111" /db_xref="ASAP:ABE-0000411" /db_xref="UniProtKB/Swiss-Prot:P36683" /db_xref="ECOCYC:EG12316" /db_xref="EcoGene:EG12316" /db_xref="GeneID:944864" /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA DGVIFQTAV" gene 134388..134750 /gene="yacL" /locus_tag="b0119" /gene_synonym="ECK0118; JW0115" /db_xref="ECOCYC:EG12605" /db_xref="EcoGene:EG12605" /db_xref="GeneID:944809" CDS 134388..134750 /gene="yacL" /locus_tag="b0119" /gene_synonym="ECK0118; JW0115" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414661.2" /db_xref="GI:90111086" /db_xref="ASAP:ABE-0000414" /db_xref="UniProtKB/Swiss-Prot:P0A8E5" /db_xref="ECOCYC:EG12605" /db_xref="EcoGene:EG12605" /db_xref="GeneID:944809" /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG VEDFLQVVAAYRNFVQQK" gene complement(134788..135582) /gene="speD" /locus_tag="b0120" /gene_synonym="ECK0119; JW0116" /db_xref="ECOCYC:EG10962" /db_xref="EcoGene:EG10962" /db_xref="GeneID:947719" CDS complement(134788..135582) /gene="speD" /locus_tag="b0120" /gene_synonym="ECK0119; JW0116" /EC_number="4.1.1.50" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3546296" /GO_process="GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine decarboxylase" /protein_id="NP_414662.1" /db_xref="GI:16128113" /db_xref="ASAP:ABE-0000416" /db_xref="UniProtKB/Swiss-Prot:P0A7F6" /db_xref="ECOCYC:EG10962" /db_xref="EcoGene:EG10962" /db_xref="GeneID:947719" /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV" gene complement(135598..136464) /gene="speE" /locus_tag="b0121" /gene_synonym="ECK0120; JW0117" /db_xref="ECOCYC:EG10963" /db_xref="EcoGene:EG10963" /db_xref="GeneID:947726" CDS complement(135598..136464) /gene="speE" /locus_tag="b0121" /gene_synonym="ECK0120; JW0117" /EC_number="2.5.1.16" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /GO_process="GO:0006596 - polyamine biosynthetic process" /note="spermidine synthase = putrescine aminopropyltransferase" /codon_start=1 /transl_table=11 /product="spermidine synthase (putrescine aminopropyltransferase)" /protein_id="NP_414663.1" /db_xref="GI:16128114" /db_xref="ASAP:ABE-0000418" /db_xref="UniProtKB/Swiss-Prot:P09158" /db_xref="ECOCYC:EG10963" /db_xref="EcoGene:EG10963" /db_xref="GeneID:947726" /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP QYLQDALASQPS" mat_peptide complement(135601..136461) /gene="speE" /locus_tag="b0121" /gene_synonym="ECK0120; JW0117" /product="spermidine synthase (putrescine aminopropyltransferase)" /experiment="N-terminus verified by Edman degradation: PMID 3526348" gene complement(136570..136917) /gene="yacC" /locus_tag="b0122" /gene_synonym="ECK0121; gspS; JW0118" /db_xref="ECOCYC:EG11089" /db_xref="EcoGene:EG11089" /db_xref="GeneID:948472" CDS complement(136570..136917) /gene="yacC" /locus_tag="b0122" /gene_synonym="ECK0121; gspS; JW0118" /codon_start=1 /transl_table=11 /product="conserved protein, PulS_OutS family" /protein_id="NP_414664.4" /db_xref="GI:90111087" /db_xref="ASAP:ABE-0000423" /db_xref="UniProtKB/Swiss-Prot:P0AA95" /db_xref="ECOCYC:EG11089" /db_xref="EcoGene:EG11089" /db_xref="GeneID:948472" /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA LARDSLSLLAYVK" gene 137083..138633 /gene="cueO" /locus_tag="b0123" /gene_synonym="cuiD; ECK0122; JW0119; yacK" /db_xref="ECOCYC:EG12318" /db_xref="EcoGene:EG12318" /db_xref="GeneID:947736" CDS 137083..138633 /gene="cueO" /locus_tag="b0123" /gene_synonym="cuiD; ECK0122; JW0119; yacK" /codon_start=1 /transl_table=11 /product="multicopper oxidase (laccase)" /protein_id="NP_414665.1" /db_xref="GI:16128116" /db_xref="ASAP:ABE-0000430" /db_xref="UniProtKB/Swiss-Prot:P36649" /db_xref="ECOCYC:EG12318" /db_xref="EcoGene:EG12318" /db_xref="GeneID:947736" /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA RNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV VIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT GMMLGFTV" mat_peptide 137167..138630 /gene="cueO" /locus_tag="b0123" /gene_synonym="cuiD; ECK0122; JW0119; yacK" /product="multicopper oxidase (laccase)" /experiment="N-terminus verified by Edman degradation: PMID 9298646" repeat_region 138699..138796 /note="RIP10 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(138835..141225) /gene="gcd" /locus_tag="b0124" /gene_synonym="ECK0123; JW0120" /db_xref="ECOCYC:EG10369" /db_xref="EcoGene:EG10369" /db_xref="GeneID:944830" CDS complement(138835..141225) /gene="gcd" /locus_tag="b0124" /gene_synonym="ECK0123; JW0120" /EC_number="1.1.5.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8509415" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0006006 - glucose metabolic process" /codon_start=1 /transl_table=11 /product="glucose dehydrogenase" /protein_id="NP_414666.1" /db_xref="GI:16128117" /db_xref="ASAP:ABE-0000433" /db_xref="UniProtKB/Swiss-Prot:P15877" /db_xref="ECOCYC:EG10369" /db_xref="EcoGene:EG10369" /db_xref="GeneID:944830" /translation="MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYP IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI WLILPFVWRRLVIPASGAVAALVVALLISGGILTWAGFNDPQEINGTLSADATPAEAI SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAE TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQM RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK" gene 141431..141967 /gene="hpt" /locus_tag="b0125" /gene_synonym="ECK0124; JW5009" /db_xref="ECOCYC:EG20098" /db_xref="EcoGene:EG20098" /db_xref="GeneID:946624" CDS 141431..141967 /gene="hpt" /locus_tag="b0125" /gene_synonym="ECK0124; JW5009" /EC_number="2.4.2.8" /function="enzyme; Salvage of nucleosides and nucleotides" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /protein_id="NP_414667.4" /db_xref="GI:90111088" /db_xref="ASAP:ABE-0000440" /db_xref="UniProtKB/Swiss-Prot:P0A9M2" /db_xref="ECOCYC:EG20098" /db_xref="EcoGene:EG20098" /db_xref="GeneID:946624" /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY AQRYRHLPYIGKVILLDE" repeat_region 141978..141998 /note="REP11 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(142008..142670) /gene="can" /locus_tag="b0126" /gene_synonym="ECK0125; JW0122; yadF" /db_xref="ECOCYC:EG12319" /db_xref="EcoGene:EG12319" /db_xref="GeneID:944832" CDS complement(142008..142670) /gene="can" /locus_tag="b0126" /gene_synonym="ECK0125; JW0122; yadF" /EC_number="4.2.1.1" /function="putative enzyme; Not classified" /note="putative carbonic anhdrase" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="NP_414668.1" /db_xref="GI:16128119" /db_xref="ASAP:ABE-0000442" /db_xref="UniProtKB/Swiss-Prot:P61517" /db_xref="ECOCYC:EG12319" /db_xref="EcoGene:EG12319" /db_xref="GeneID:944832" /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN HK" gene 142779..143705 /gene="yadG" /locus_tag="b0127" /gene_synonym="ECK0126; JW0123" /db_xref="ECOCYC:EG12320" /db_xref="EcoGene:EG12320" /db_xref="GeneID:944833" CDS 142779..143705 /gene="yadG" /locus_tag="b0127" /gene_synonym="ECK0126; JW0123" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="predicted transporter subunit: ATP-binding component of ABC superfamily" /protein_id="NP_414669.1" /db_xref="GI:16128120" /db_xref="ASAP:ABE-0000447" /db_xref="UniProtKB/Swiss-Prot:P36879" /db_xref="ECOCYC:EG12320" /db_xref="EcoGene:EG12320" /db_xref="GeneID:944833" /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT SMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA" gene 143702..144472 /gene="yadH" /locus_tag="b0128" /gene_synonym="ECK0127; JW0124" /db_xref="ECOCYC:EG12321" /db_xref="EcoGene:EG12321" /db_xref="GeneID:944836" CDS 143702..144472 /gene="yadH" /locus_tag="b0128" /gene_synonym="ECK0127; JW0124" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted transporter subunit: membrane component of ABC superfamily" /protein_id="NP_414670.1" /db_xref="GI:16128121" /db_xref="ASAP:ABE-0000450" /db_xref="UniProtKB/Swiss-Prot:P0AFN6" /db_xref="ECOCYC:EG12321" /db_xref="EcoGene:EG12321" /db_xref="GeneID:944836" /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF LGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS" gene 144577..145017 /gene="yadI" /locus_tag="b0129" /gene_synonym="agaX; ECK0128; JW0125" /db_xref="ECOCYC:EG12322" /db_xref="EcoGene:EG12322" /db_xref="GeneID:947397" CDS 144577..145017 /gene="yadI" /locus_tag="b0129" /gene_synonym="agaX; ECK0128; JW0125" /function="putative transport; Not classified" /GO_process="GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system" /note="putative PTS enzyme II B component" /codon_start=1 /transl_table=11 /product="predicted PTS Enzyme IIA" /protein_id="NP_414671.1" /db_xref="GI:16128122" /db_xref="ASAP:ABE-0000453" /db_xref="UniProtKB/Swiss-Prot:P36881" /db_xref="ECOCYC:EG12322" /db_xref="EcoGene:EG12322" /db_xref="GeneID:947397" /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY" gene 145081..146310 /gene="yadE" /locus_tag="b0130" /gene_synonym="ECK0129; JW0126" /db_xref="ECOCYC:EG11749" /db_xref="EcoGene:EG11749" /db_xref="GeneID:946536" CDS 145081..146310 /gene="yadE" /locus_tag="b0130" /gene_synonym="ECK0129; JW0126" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="predicted polysaccharide deacetylase lipoprotein" /protein_id="NP_414672.1" /db_xref="GI:16128123" /db_xref="ASAP:ABE-0000457" /db_xref="UniProtKB/Swiss-Prot:P31666" /db_xref="ECOCYC:EG11749" /db_xref="EcoGene:EG11749" /db_xref="GeneID:946536" /translation="MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVT VGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSN QNLVTWKDTPVYNAPSAGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS ALDAQPDNGLSVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMVQ LEGYVKNKINLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKW NPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRA LAQFNPHVWYLSYPFGGFNDNAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILR TDSLETMSRLVSNQPQG" gene complement(146314..146694) /gene="panD" /locus_tag="b0131" /gene_synonym="ECK0130; JW0127" /db_xref="ECOCYC:EG11747" /db_xref="EcoGene:EG11747" /db_xref="GeneID:945686" CDS complement(146314..146694) /gene="panD" /locus_tag="b0131" /gene_synonym="ECK0130; JW0127" /EC_number="4.1.1.11" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /experiment="N-terminus verified by Edman degradation: PMID 9169598" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015937 - coenzyme A biosynthetic process" /codon_start=1 /transl_table=11 /product="aspartate 1-decarboxylase" /protein_id="NP_414673.1" /db_xref="GI:16128124" /db_xref="ASAP:ABE-0000459" /db_xref="UniProtKB/Swiss-Prot:P0A790" /db_xref="ECOCYC:EG11747" /db_xref="EcoGene:EG11747" /db_xref="GeneID:945686" /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR PNVAYFEGDNEMKRTAKAIPVQVA" gene 146968..147870 /gene="yadD" /locus_tag="b0132" /gene_synonym="ECK0131; JW5010" /db_xref="ECOCYC:EG11748" /db_xref="EcoGene:EG11748" /db_xref="GeneID:944781" CDS 146968..147870 /gene="yadD" /locus_tag="b0132" /gene_synonym="ECK0131; JW5010" /codon_start=1 /transl_table=11 /product="predicted transposase" /protein_id="NP_414674.1" /db_xref="GI:16128125" /db_xref="ASAP:ABE-0000463" /db_xref="UniProtKB/Swiss-Prot:P31665" /db_xref="ECOCYC:EG11748" /db_xref="EcoGene:EG11748" /db_xref="GeneID:944781" /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAM HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEVSQEFAQRLLSKG MSREDVAEMANLPLAEIDKVINLI" gene complement(147944..148795) /gene="panC" /locus_tag="b0133" /gene_synonym="ECK0132; JW0129" /db_xref="ECOCYC:EG11746" /db_xref="EcoGene:EG11746" /db_xref="GeneID:944958" CDS complement(147944..148795) /gene="panC" /locus_tag="b0133" /gene_synonym="ECK0132; JW0129" /EC_number="6.3.2.1" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015937 - coenzyme A biosynthetic process" /codon_start=1 /transl_table=11 /product="pantothenate synthetase" /protein_id="NP_414675.1" /db_xref="GI:16128126" /db_xref="ASAP:ABE-0000465" /db_xref="UniProtKB/Swiss-Prot:P31663" /db_xref="ECOCYC:EG11746" /db_xref="EcoGene:EG11746" /db_xref="GeneID:944958" /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG ERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID NKMVELA" gene complement(148807..149601) /gene="panB" /locus_tag="b0134" /gene_synonym="ECK0133; JW0130" /db_xref="ECOCYC:EG11675" /db_xref="EcoGene:EG11675" /db_xref="GeneID:944839" CDS complement(148807..149601) /gene="panB" /locus_tag="b0134" /gene_synonym="ECK0133; JW0130" /EC_number="2.1.2.11" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /experiment="N-terminus verified by Edman degradation: PMID 8096212,9298646" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015937 - coenzyme A biosynthetic process" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="NP_414676.1" /db_xref="GI:16128127" /db_xref="ASAP:ABE-0000467" /db_xref="UniProtKB/Swiss-Prot:P31057" /db_xref="ECOCYC:EG11675" /db_xref="EcoGene:EG11675" /db_xref="GeneID:944839" /translation="MKPTTISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVG DSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAAT VMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH" gene complement(149715..150953) /gene="yadC" /locus_tag="b0135" /gene_synonym="ECK0134; JW0131" /db_xref="ECOCYC:EG11678" /db_xref="EcoGene:EG11678" /db_xref="GeneID:944837" CDS complement(149715..150953) /gene="yadC" /locus_tag="b0135" /gene_synonym="ECK0134; JW0131" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_414677.1" /db_xref="GI:16128128" /db_xref="ASAP:ABE-0000470" /db_xref="UniProtKB/Swiss-Prot:P31058" /db_xref="ECOCYC:EG11678" /db_xref="EcoGene:EG11678" /db_xref="GeneID:944837" /translation="MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAA QMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIE NAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFF FSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNY LYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSS GTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVL IEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDG NIAIEPGEFKATSTFQVTYP" gene complement(151003..151599) /gene="yadK" /locus_tag="b0136" /gene_synonym="ECK0135; JW0132" /db_xref="ECOCYC:EG12325" /db_xref="EcoGene:EG12325" /db_xref="GeneID:944835" CDS complement(151003..151599) /gene="yadK" /locus_tag="b0136" /gene_synonym="ECK0135; JW0132" /function="orf; Not classified" /note="putative fimbrial protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_414678.1" /db_xref="GI:16128129" /db_xref="ASAP:ABE-0000472" /db_xref="UniProtKB/Swiss-Prot:P37016" /db_xref="ECOCYC:EG12325" /db_xref="EcoGene:EG12325" /db_xref="GeneID:944835" /translation="MHPTQRKLMKRIILFLSLLFCIACPAIAGQDIDLVANVKNSTCK SGISNQGNIDLGVVGVGYFSGNVTPESYQPGGKEFTITVSDCALQGTGDVLNQLHIDF RALSGVMAAGSRQIFANEISSGASNVGVVIFSTQDSANTFNVLNASGGSRSVYPVMSD DMNGSSWKFSTRMQKIDPALSVTSGQLMSHVLVDIYYE" gene complement(151626..152231) /gene="yadL" /locus_tag="b0137" /gene_synonym="ECK0136; JW0133" /db_xref="ECOCYC:EG12326" /db_xref="EcoGene:EG12326" /db_xref="GeneID:944829" CDS complement(151626..152231) /gene="yadL" /locus_tag="b0137" /gene_synonym="ECK0136; JW0133" /function="orf; Not classified" /note="putative fimbrial protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_414679.1" /db_xref="GI:16128130" /db_xref="ASAP:ABE-0000475" /db_xref="UniProtKB/Swiss-Prot:P37017" /db_xref="ECOCYC:EG12326" /db_xref="EcoGene:EG12326" /db_xref="GeneID:944829" /translation="MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMG TCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKR ATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTIST AANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN" gene complement(152243..152812) /gene="yadM" /locus_tag="b0138" /gene_synonym="ECK0137; JW0134" /db_xref="ECOCYC:EG12327" /db_xref="EcoGene:EG12327" /db_xref="GeneID:944828" CDS complement(152243..152812) /gene="yadM" /locus_tag="b0138" /gene_synonym="ECK0137; JW0134" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_414680.4" /db_xref="GI:90111089" /db_xref="ASAP:ABE-0000477" /db_xref="UniProtKB/Swiss-Prot:P37018" /db_xref="ECOCYC:EG12327" /db_xref="EcoGene:EG12327" /db_xref="GeneID:944828" /translation="MIKTTPHKIVILMGILLSPSVFATDINVEFTATVKATTCNITLT GNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNAS SSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLE MTVALRETDAGQGVPGNFRALATFNFIYQ" gene complement(152829..155426) /gene="htrE" /locus_tag="b0139" /gene_synonym="ECK0138; JW0135" /db_xref="ECOCYC:EG11972" /db_xref="EcoGene:EG11972" /db_xref="GeneID:944819" CDS complement(152829..155426) /gene="htrE" /locus_tag="b0139" /gene_synonym="ECK0138; JW0135" /function="putative membrane; Surface structures" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="probable outer membrane porin protein involved in fimbrial assembly" /codon_start=1 /transl_table=11 /product="predicted outer membrane usher protein" /protein_id="NP_414681.1" /db_xref="GI:16128132" /db_xref="ASAP:ABE-0000479" /db_xref="UniProtKB/Swiss-Prot:P33129" /db_xref="ECOCYC:EG11972" /db_xref="EcoGene:EG11972" /db_xref="GeneID:944819" /translation="MTIEYTKNYHHLTRIATFCALLYCNTAFSAELVEYDHTFLMGQN ASNIDLSRYSEGNPAIPGVYDVSVYVNDQPIINQSITFVAIEGKKNAQACITLKNLLQ FHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNDQRLDIDVPQAWVMKN YQNYVDPSLWENGINAAMLSYNLNGYHSETPGRKNESIYAAFNGGMNLGAWRLRASGN YNWMTDSGSNYDFKNRYVQRDIASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRML PPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTI EESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNY LTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNK LFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNYSRMKNQVTV SINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSTSWGSYSVSAQRSWNE DGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQISSDFKGNNQLNVSSSGYSDNAR VSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLAGSISANSDNSRQVSLSTDGGFVL HSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTIDRWGYGVTSALSPYHENRIA LDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIY DEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEQSKPVSCLAHYQQSPEAEKIAQSII LNGIRCQIQ" gene complement(155461..156201) /gene="ecpD" /locus_tag="b0140" /gene_synonym="ECK0139; JW0136" /db_xref="ECOCYC:EG11973" /db_xref="EcoGene:EG11973" /db_xref="GeneID:944859" CDS complement(155461..156201) /gene="ecpD" /locus_tag="b0140" /gene_synonym="ECK0139; JW0136" /function="putative factor; Surface structures" /GO_component="GO:0019866 - organelle inner membrane" /GO_process="GO:0006457 - protein folding" /note="probable pilin chaperone similar to PapD" /codon_start=1 /transl_table=11 /product="predicted periplasmic pilin chaperone" /protein_id="NP_414682.1" /db_xref="GI:16128133" /db_xref="ASAP:ABE-0000482" /db_xref="UniProtKB/Swiss-Prot:P33128" /db_xref="ECOCYC:EG11973" /db_xref="EcoGene:EG11973" /db_xref="GeneID:944859" /translation="MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVN VRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST SLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVNG LNGKANSAKVHFYAINDFGGAIEGNARL" gene complement(156299..156883) /gene="yadN" /locus_tag="b0141" /gene_synonym="ECK0140; JW0137" /db_xref="ECOCYC:EG12328" /db_xref="EcoGene:EG12328" /db_xref="GeneID:944841" CDS complement(156299..156883) /gene="yadN" /locus_tag="b0141" /gene_synonym="ECK0140; JW0137" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_414683.1" /db_xref="GI:16128134" /db_xref="ASAP:ABE-0000487" /db_xref="UniProtKB/Swiss-Prot:P37050" /db_xref="ECOCYC:EG12328" /db_xref="EcoGene:EG12328" /db_xref="GeneID:944841" /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFG SVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ" gene complement(157253..157732) /gene="folK" /locus_tag="b0142" /gene_synonym="ECK0141; JW0138" /db_xref="ECOCYC:EG11374" /db_xref="EcoGene:EG11374" /db_xref="GeneID:948792" CDS complement(157253..157732) /gene="folK" /locus_tag="b0142" /gene_synonym="ECK0141; JW0138" /EC_number="2.7.6.3" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /GO_process="GO:0046656 - folic acid biosynthetic process" /note="7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase" /codon_start=1 /transl_table=11 /product="2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase" /protein_id="NP_414684.1" /db_xref="GI:16128135" /db_xref="ASAP:ABE-0000491" /db_xref="UniProtKB/Swiss-Prot:P26281" /db_xref="ECOCYC:EG11374" /db_xref="EcoGene:EG11374" /db_xref="GeneID:948792" /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTP PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLF GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW" mat_peptide complement(157256..157729) /gene="folK" /locus_tag="b0142" /gene_synonym="ECK0141; JW0138" /product="2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase" /experiment="N-terminus verified by Edman degradation: PMID 1325970,1657875" gene complement(157729..159126) /gene="pcnB" /locus_tag="b0143" /gene_synonym="ECK0142; JW5808" /db_xref="ECOCYC:EG10690" /db_xref="EcoGene:EG10690" /db_xref="GeneID:947318" CDS complement(157729..159126) /gene="pcnB" /locus_tag="b0143" /gene_synonym="ECK0142; JW5808" /EC_number="2.7.7.19" /function="enzyme; RNA synthesis, modification, DNA transcription" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="poly(A) polymerase I" /protein_id="NP_414685.4" /db_xref="GI:162135892" /db_xref="ASAP:ABE-0000493" /db_xref="UniProtKB/Swiss-Prot:P0ABF1" /db_xref="ECOCYC:EG10690" /db_xref="EcoGene:EG10690" /db_xref="GeneID:947318" /translation="MFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDI SENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLV GRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQR RDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAK LGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLF PTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIA QESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLL EHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRR TRRPRKRAPRREGTA" mat_peptide complement(157732..159096) /gene="pcnB" /locus_tag="b0143" /gene_synonym="ECK0142; JW5808" /product="poly(A) polymerase I" /experiment="N-terminus verified by Edman degradation: PMID 1438224" gene complement(159186..160112) /gene="yadB" /locus_tag="b0144" /gene_synonym="ECK0143; JW5892" /db_xref="ECOCYC:EG11362" /db_xref="EcoGene:EG11362" /db_xref="GeneID:944846" CDS complement(159186..160112) /gene="yadB" /locus_tag="b0144" /gene_synonym="ECK0143; JW5892" /EC_number="6.1.1.-" /function="putative enzyme; Aminoacyl tRNA synthetases, tRNA modification" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="putative tRNA synthetase" /codon_start=1 /transl_table=11 /product="glutamyl-Q tRNA(Asp) synthetase" /protein_id="NP_414686.3" /db_xref="GI:226524698" /db_xref="ASAP:ABE-0000497" /db_xref="UniProtKB/Swiss-Prot:P27305" /db_xref="ECOCYC:EG11362" /db_xref="EcoGene:EG11362" /db_xref="GeneID:944846" /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL HEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFS VEQILQSAVKNWRLTAVPESAIVNSTFSNASC" gene complement(160149..160604) /gene="dksA" /locus_tag="b0145" /gene_synonym="ECK0144; JW0141; msmA" /db_xref="ECOCYC:EG10230" /db_xref="EcoGene:EG10230" /db_xref="GeneID:944850" CDS complement(160149..160604) /gene="dksA" /locus_tag="b0145" /gene_synonym="ECK0144; JW0141; msmA" /function="phenotype; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /note="dnaK suppressor protein" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein" /protein_id="NP_414687.1" /db_xref="GI:16128138" /db_xref="ASAP:ABE-0000499" /db_xref="UniProtKB/Swiss-Prot:P0ABS1" /db_xref="ECOCYC:EG10230" /db_xref="EcoGene:EG10230" /db_xref="GeneID:944850" /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG" gene complement(160782..161486) /gene="sfsA" /locus_tag="b0146" /gene_synonym="ECK0145; JW0142; sfs; sfs1" /db_xref="ECOCYC:EG10949" /db_xref="EcoGene:EG10949" /db_xref="GeneID:944855" CDS complement(160782..161486) /gene="sfsA" /locus_tag="b0146" /gene_synonym="ECK0145; JW0142; sfs; sfs1" /function="putative regulator; Degradation of small molecules: Carbon compounds" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="probable regulator for maltose metabolism" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_414688.1" /db_xref="GI:16128139" /db_xref="ASAP:ABE-0000503" /db_xref="UniProtKB/Swiss-Prot:P0A823" /db_xref="ECOCYC:EG10949" /db_xref="EcoGene:EG10949" /db_xref="GeneID:944855" /translation="MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC ATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE ISAEGMALKKSLPVTL" gene complement(161501..162031) /gene="ligT" /locus_tag="b0147" /gene_synonym="ECK0146; JW5011; yadP" /db_xref="ECOCYC:EG12330" /db_xref="EcoGene:EG12330" /db_xref="GeneID:944848" CDS complement(161501..162031) /gene="ligT" /locus_tag="b0147" /gene_synonym="ECK0146; JW5011; yadP" /EC_number="6.5.1.-" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="2'-5' RNA ligase" /protein_id="NP_414689.4" /db_xref="GI:90111091" /db_xref="ASAP:ABE-0000505" /db_xref="UniProtKB/Swiss-Prot:P37025" /db_xref="ECOCYC:EG12330" /db_xref="EcoGene:EG12330" /db_xref="GeneID:944848" /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA RGRTRYTPLKRWALTQ" mat_peptide complement(161504..162028) /gene="ligT" /locus_tag="b0147" /gene_synonym="ECK0146; JW5011; yadP" /product="2'-5' RNA ligase" /experiment="N-terminus verified by Edman degradation: PMID 8940112" gene 162105..164534 /gene="hrpB" /locus_tag="b0148" /gene_synonym="ECK0147; JW0144; yadO" /db_xref="ECOCYC:EG12329" /db_xref="EcoGene:EG12329" /db_xref="GeneID:944845" CDS 162105..164534 /gene="hrpB" /locus_tag="b0148" /gene_synonym="ECK0147; JW0144; yadO" /function="enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /note="helicase, ATP-dependent" /codon_start=1 /transl_table=11 /product="predicted ATP-dependent helicase" /protein_id="NP_414690.4" /db_xref="GI:162135893" /db_xref="ASAP:ABE-0000510" /db_xref="UniProtKB/Swiss-Prot:P37024" /db_xref="ECOCYC:EG12329" /db_xref="EcoGene:EG12329" /db_xref="GeneID:944845" /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH PGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD NDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLF LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLH LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRL LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG RYQLANGMGAMLDANDALSRHEWLIAPLLLQGSASPDARILLALLVDIDELVQRCPQL VQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLAALETWLLPHMTGVHSLRGLKSLD IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN PTIAQGRVPLVLELLSPAQRPLQITRDLSDFWKGAYREVQKEMKGRYPKHVWPDDPAN TAPTRRTKKYS" gene 164730..167264 /gene="mrcB" /locus_tag="b0149" /gene_synonym="ECK0148; JW0145; pbpF; ponB" /db_xref="ECOCYC:EG10605" /db_xref="EcoGene:EG10605" /db_xref="GeneID:944843" CDS 164730..167264 /gene="mrcB" /locus_tag="b0149" /gene_synonym="ECK0148; JW0145; pbpF; ponB" /EC_number="2.4.1.129" /EC_number="3.4.-.-" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0046349 - amino sugar biosynthetic process; GO:0009252 - peptidoglycan biosynthetic process; GO:0042493 - response to drug" /note="peptidoglycan synthetase; penicillin-binding protein 1B" /codon_start=1 /transl_table=11 /product="fused glycosyl transferase and transpeptidase" /protein_id="NP_414691.1" /db_xref="GI:16128142" /db_xref="ASAP:ABE-0000516" /db_xref="UniProtKB/Swiss-Prot:P02919" /db_xref="ECOCYC:EG10605" /db_xref="EcoGene:EG10605" /db_xref="GeneID:944843" /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD FPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLV DALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAM SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRILPVWTSDPQSLCQQSE MQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN" repeat_region 167281..167305 /note="REP12 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 167484..169727 /gene="fhuA" /locus_tag="b0150" /gene_synonym="ECK0149; JW0146; T1; tonA" /db_xref="ECOCYC:EG10302" /db_xref="EcoGene:EG10302" /db_xref="GeneID:944856" CDS 167484..169727 /gene="fhuA" /locus_tag="b0150" /gene_synonym="ECK0149; JW0146; T1; tonA" /function="membrane; Outer membrane constituents" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80" /codon_start=1 /transl_table=11 /product="ferrichrome outer membrane transporter" /protein_id="NP_414692.1" /db_xref="GI:16128143" /db_xref="ASAP:ABE-0000520" /db_xref="UniProtKB/Swiss-Prot:P06971" /db_xref="ECOCYC:EG10302" /db_xref="EcoGene:EG10302" /db_xref="GeneID:944856" /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV TAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEA LSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLD DDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGY YGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLR FAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDT QLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDP ANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQ FTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRP IVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYT DAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS FKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVV ATATFRF" mat_peptide 167583..169724 /gene="fhuA" /locus_tag="b0150" /gene_synonym="ECK0149; JW0146; T1; tonA" /product="ferrichrome outer membrane transporter" /experiment="N-terminus verified by Edman degradation: PMID 3079747" gene 169778..170575 /gene="fhuC" /locus_tag="b0151" /gene_synonym="ECK0150; JW0147" /db_xref="ECOCYC:EG10304" /db_xref="EcoGene:EG10304" /db_xref="GeneID:945250" CDS 169778..170575 /gene="fhuC" /locus_tag="b0151" /gene_synonym="ECK0150; JW0147" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0005737 - cytoplasm" /note="ATP-binding component of hydroxymate-dependent iron transport" /codon_start=1 /transl_table=11 /product="iron-hydroxamate transporter subunit" /protein_id="NP_414693.1" /db_xref="GI:16128144" /db_xref="ASAP:ABE-0000522" /db_xref="UniProtKB/Swiss-Prot:P07821" /db_xref="ECOCYC:EG10304" /db_xref="EcoGene:EG10304" /db_xref="GeneID:945250" /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG HNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM LVAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYL VALRGGEMIAQGTPAEIMRGETLEMIYGIPMGILPHPAGAAPVSFVY" gene 170575..171465 /gene="fhuD" /locus_tag="b0152" /gene_synonym="ECK0151; JW0148" /db_xref="ECOCYC:EG10305" /db_xref="EcoGene:EG10305" /db_xref="GeneID:947510" CDS 170575..171465 /gene="fhuD" /locus_tag="b0152" /gene_synonym="ECK0151; JW0148" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006826 - iron ion transport" /note="hydroxamate-dependent iron uptake, cytoplasmic membrane component; periplasmic-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="iron-hydroxamate transporter subunit" /protein_id="NP_414694.1" /db_xref="GI:16128145" /db_xref="ASAP:ABE-0000524" /db_xref="UniProtKB/Swiss-Prot:P07822" /db_xref="ECOCYC:EG10305" /db_xref="EcoGene:EG10305" /db_xref="GeneID:947510" /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW SAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG ATLSAMHFVRVLDNAIGGKA" gene 171462..173444 /gene="fhuB" /locus_tag="b0153" /gene_synonym="ECK0152; JW0149" /db_xref="ECOCYC:EG10303" /db_xref="EcoGene:EG10303" /db_xref="GeneID:946890" CDS 171462..173444 /gene="fhuB" /locus_tag="b0153" /gene_synonym="ECK0152; JW0149" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components" /protein_id="NP_414695.1" /db_xref="GI:16128146" /db_xref="ASAP:ABE-0000526" /db_xref="UniProtKB/Swiss-Prot:P06972" /db_xref="ECOCYC:EG10303" /db_xref="EcoGene:EG10303" /db_xref="GeneID:946890" /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG ITVTTLWAIPGAMASQFAAQAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDLMPWRWP RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL LPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV LTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTR IALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR" repeat_region 173504..173588 /note="REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(173602..174882) /gene="hemL" /locus_tag="b0154" /gene_synonym="ECK0153; gsa?; JW0150; popC" /db_xref="ECOCYC:EG10432" /db_xref="EcoGene:EG10432" /db_xref="GeneID:946892" CDS complement(173602..174882) /gene="hemL" /locus_tag="b0154" /gene_synonym="ECK0153; gsa?; JW0150; popC" /EC_number="5.4.3.8" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde aminotransferase (aminomutase)" /protein_id="NP_414696.1" /db_xref="GI:16128147" /db_xref="ASAP:ABE-0000529" /db_xref="UniProtKB/Swiss-Prot:P23893" /db_xref="ECOCYC:EG10432" /db_xref="EcoGene:EG10432" /db_xref="GeneID:946892" /translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYL YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL GQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPE FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG LLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL" gene 175107..176528 /gene="clcA" /locus_tag="b0155" /gene_synonym="ECK0154; eriC; JW5012; yadQ" /db_xref="ECOCYC:EG12331" /db_xref="EcoGene:EG12331" /db_xref="GeneID:946715" CDS 175107..176528 /gene="clcA" /locus_tag="b0155" /gene_synonym="ECK0154; eriC; JW5012; yadQ" /function="putative transport; Not classified" /note="putative channel transporter" /codon_start=1 /transl_table=11 /product="chloride channel, voltage-gated" /protein_id="NP_414697.1" /db_xref="GI:16128148" /db_xref="ASAP:ABE-0000533" /db_xref="UniProtKB/Swiss-Prot:P37019" /db_xref="ECOCYC:EG12331" /db_xref="EcoGene:EG12331" /db_xref="GeneID:946715" /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIA GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILA RTLAKQEAEQLARSKAASASENT" gene 176610..176954 /gene="erpA" /locus_tag="b0156" /gene_synonym="ECK0155; JW0152; yadR" /db_xref="ECOCYC:EG12332" /db_xref="EcoGene:EG12332" /db_xref="GeneID:944857" CDS 176610..176954 /gene="erpA" /locus_tag="b0156" /gene_synonym="ECK0155; JW0152; yadR" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster insertion protein" /protein_id="NP_414698.1" /db_xref="GI:16128149" /db_xref="ASAP:ABE-0000538" /db_xref="UniProtKB/Swiss-Prot:P0ACC3" /db_xref="ECOCYC:EG12332" /db_xref="EcoGene:EG12332" /db_xref="GeneID:944857" /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA KSTCGCGSSFSI" repeat_region 176969..176987 /note="REP14 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(177001..177624) /gene="yadS" /locus_tag="b0157" /gene_synonym="ECK0156; JW0153" /db_xref="ECOCYC:EG12333" /db_xref="EcoGene:EG12333" /db_xref="GeneID:949062" CDS complement(177001..177624) /gene="yadS" /locus_tag="b0157" /gene_synonym="ECK0156; JW0153" /codon_start=1 /transl_table=11 /product="inner membrane protein, UPF0126 family" /protein_id="NP_414699.1" /db_xref="GI:16128150" /db_xref="ASAP:ABE-0000540" /db_xref="UniProtKB/Swiss-Prot:P0AFP0" /db_xref="ECOCYC:EG12333" /db_xref="EcoGene:EG12333" /db_xref="GeneID:949062" /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR" gene complement(177662..178462) /gene="btuF" /locus_tag="b0158" /gene_synonym="ECK0157; JW0154; yadT" /db_xref="ECOCYC:EG12334" /db_xref="EcoGene:EG12334" /db_xref="GeneID:947574" CDS complement(177662..178462) /gene="btuF" /locus_tag="b0158" /gene_synonym="ECK0157; JW0154; yadT" /GO_component="GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily" /protein_id="NP_414700.1" /db_xref="GI:16128151" /db_xref="ASAP:ABE-0000542" /db_xref="UniProtKB/Swiss-Prot:P37028" /db_xref="ECOCYC:EG12334" /db_xref="EcoGene:EG12334" /db_xref="GeneID:947574" /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGI KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP DQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD" mat_peptide complement(177665..178396) /gene="btuF" /locus_tag="b0158" /gene_synonym="ECK0157; JW0154; yadT" /product="vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily" /experiment="N-terminus verified by Edman degradation: PMID 11790740" gene complement(178455..179153) /gene="mtn" /locus_tag="b0159" /gene_synonym="ECK0158; JW0155; mtnN; pfs; yadA" /db_xref="ECOCYC:EG11090" /db_xref="EcoGene:EG11090" /db_xref="GeneID:948542" CDS complement(178455..179153) /gene="mtn" /locus_tag="b0159" /gene_synonym="ECK0158; JW0155; mtnN; pfs; yadA" /EC_number="3.2.2.9" /EC_number="3.2.2.16" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" /protein_id="NP_414701.1" /db_xref="GI:16128152" /db_xref="ASAP:ABE-0000545" /db_xref="UniProtKB/Swiss-Prot:P0AF12" /db_xref="ECOCYC:EG11090" /db_xref="EcoGene:EG11090" /db_xref="GeneID:948542" /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS SLMVESLVQKLAHG" gene 179237..180754 /gene="dgt" /locus_tag="b0160" /gene_synonym="ECK0159; JW0156; optA" /db_xref="ECOCYC:EG10225" /db_xref="EcoGene:EG10225" /db_xref="GeneID:947177" CDS 179237..180754 /gene="dgt" /locus_tag="b0160" /gene_synonym="ECK0159; JW0156; optA" /EC_number="3.1.5.1" /function="enzyme; Central intermediary metabolism: Nucleotide hydrolysis" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="deoxyguanosine triphosphate triphosphohydrolase" /protein_id="NP_414702.1" /db_xref="GI:16128153" /db_xref="ASAP:ABE-0000548" /db_xref="UniProtKB/Swiss-Prot:P15723" /db_xref="ECOCYC:EG10225" /db_xref="EcoGene:EG10225" /db_xref="GeneID:947177" /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDEL TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS HPDVERLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ" mat_peptide 179240..180751 /gene="dgt" /locus_tag="b0160" /gene_synonym="ECK0159; JW0156; optA" /product="deoxyguanosine triphosphate triphosphohydrolase" /experiment="N-terminus verified by Edman degradation: PMID 2826481,2833745" gene 180884..182308 /gene="degP" /locus_tag="b0161" /gene_synonym="ECK0160; htrA; JW0157; ptd" /db_xref="ECOCYC:EG10463" /db_xref="EcoGene:EG10463" /db_xref="GeneID:947139" CDS 180884..182308 /gene="degP" /locus_tag="b0161" /gene_synonym="ECK0160; htrA; JW0157; ptd" /EC_number="3.4.21.-" /function="enzyme; Degradation of proteins, peptides, glycopeptides" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009266 - response to temperature stimulus" /note="periplasmic serine protease Do; heat shock protein HtrA" /codon_start=1 /transl_table=11 /product="serine endoprotease (protease Do), membrane-associated" /protein_id="NP_414703.1" /db_xref="GI:16128154" /db_xref="ASAP:ABE-0000551" /db_xref="UniProtKB/Swiss-Prot:P0C0V0" /db_xref="ECOCYC:EG10463" /db_xref="EcoGene:EG10463" /db_xref="GeneID:947139" /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV LDSKPSVLALNIQRGDSTIYLLMQ" mat_peptide 180962..182305 /gene="degP" /locus_tag="b0161" /gene_synonym="ECK0160; htrA; JW0157; ptd" /product="serine endoprotease (protease Do), membrane-associated" /experiment="N-terminus verified by Edman degradation: PMID 2180903,9600841" gene 182463..183620 /gene="cdaR" /locus_tag="b0162" /gene_synonym="ECK0161; JW5013; sdaR; yaeG" /db_xref="ECOCYC:EG12335" /db_xref="EcoGene:EG12335" /db_xref="GeneID:944860" CDS 182463..183620 /gene="cdaR" /locus_tag="b0162" /gene_synonym="ECK0161; JW5013; sdaR; yaeG" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator for gar and gud operons; carbohydrate diacid regulator" /protein_id="NP_414704.4" /db_xref="GI:90111093" /db_xref="ASAP:ABE-0000554" /db_xref="UniProtKB/Swiss-Prot:P37047" /db_xref="ECOCYC:EG12335" /db_xref="EcoGene:EG12335" /db_xref="GeneID:944860" /translation="MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDL NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHN VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER" gene complement(183709..184095) /gene="yaeH" /locus_tag="b0163" /gene_synonym="ECK0162; JW0159" /db_xref="ECOCYC:EG12336" /db_xref="EcoGene:EG12336" /db_xref="GeneID:947044" CDS complement(183709..184095) /gene="yaeH" /locus_tag="b0163" /gene_synonym="ECK0162; JW0159" /function="putative structure; Not classified" /note="putative structural protein" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0325 family" /protein_id="NP_414705.1" /db_xref="GI:16128156" /db_xref="ASAP:ABE-0000556" /db_xref="UniProtKB/Swiss-Prot:P62768" /db_xref="ECOCYC:EG12336" /db_xref="EcoGene:EG12336" /db_xref="GeneID:947044" /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD DLRHLESVVTNKISEIEADLEKLTRK" gene complement(184257..185069) /gene="yaeI" /locus_tag="b0164" /gene_synonym="ECK0163; JW5014" /db_xref="ECOCYC:EG12337" /db_xref="EcoGene:EG12337" /db_xref="GeneID:945002" CDS complement(184257..185069) /gene="yaeI" /locus_tag="b0164" /gene_synonym="ECK0163; JW5014" /codon_start=1 /transl_table=11 /product="phosphodiesterase with model substrate bis-pNPP" /protein_id="NP_414706.2" /db_xref="GI:90111094" /db_xref="ASAP:ABE-0000559" /db_xref="UniProtKB/Swiss-Prot:P37049" /db_xref="ECOCYC:EG12337" /db_xref="EcoGene:EG12337" /db_xref="GeneID:945002" /translation="MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKD NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFS DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFE LVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVP LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV" gene complement(185123..185947) /gene="dapD" /locus_tag="b0166" /gene_synonym="ECK0164; JW0161; ssa" /db_xref="ECOCYC:EG10207" /db_xref="EcoGene:EG10207" /db_xref="GeneID:944862" CDS complement(185123..185947) /gene="dapD" /locus_tag="b0166" /gene_synonym="ECK0164; JW0161; ssa" /EC_number="2.3.1.117" /function="enzyme; Amino acid biosynthesis: Lysine" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9298646" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" /protein_id="NP_414708.1" /db_xref="GI:16128159" /db_xref="ASAP:ABE-0000565" /db_xref="UniProtKB/Swiss-Prot:P0A9D8" /db_xref="ECOCYC:EG10207" /db_xref="EcoGene:EG10207" /db_xref="GeneID:944862" /translation="MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALR VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE TGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID" gene complement(185978..188650) /gene="glnD" /locus_tag="b0167" /gene_synonym="ECK0165; JW0162" /db_xref="ECOCYC:EG11411" /db_xref="EcoGene:EG11411" /db_xref="GeneID:944863" CDS complement(185978..188650) /gene="glnD" /locus_tag="b0167" /gene_synonym="ECK0165; JW0162" /EC_number="2.7.7.59" /function="enzyme; Amino acid biosynthesis: Glutamine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006542 - glutamine biosynthetic process; GO:0006807 - nitrogen compound metabolic process; GO:0006464 - protein modification process" /note="protein PII; uridylyltransferase acts on regulator of glnA" /codon_start=1 /transl_table=11 /product="uridylyltransferase" /protein_id="NP_414709.1" /db_xref="GI:16128160" /db_xref="ASAP:ABE-0000568" /db_xref="UniProtKB/Swiss-Prot:P27249" /db_xref="ECOCYC:EG11411" /db_xref="EcoGene:EG11411" /db_xref="GeneID:944863" /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP LSDVDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVHNSAITGI YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI FTTRDGMAMDTFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED LFIIATADRRALNNELQQEVHQRLTEALNPNDKG" gene complement(188712..189506) /gene="map" /locus_tag="b0168" /gene_synonym="ECK0166; JW0163; pepM" /db_xref="ECOCYC:EG10570" /db_xref="EcoGene:EG10570" /db_xref="GeneID:947882" CDS complement(188712..189506) /gene="map" /locus_tag="b0168" /gene_synonym="ECK0166; JW0163; pepM" /EC_number="3.4.11.18" /function="enzyme; Proteins - translation and modification" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="NP_414710.1" /db_xref="GI:16128161" /db_xref="ASAP:ABE-0000571" /db_xref="UniProtKB/Swiss-Prot:P0AE18" /db_xref="ECOCYC:EG10570" /db_xref="EcoGene:EG10570" /db_xref="GeneID:947882" /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE" mat_peptide complement(188715..189503) /gene="map" /locus_tag="b0168" /gene_synonym="ECK0166; JW0163; pepM" /product="methionine aminopeptidase" /experiment="N-terminus verified by Edman degradation: PMID 3027045" gene 189712..189847 /gene="tff" /locus_tag="b4414" /gene_synonym="ECK0167; JWR0225; t44" /db_xref="ECOCYC:G0-8895" /db_xref="EcoGene:EG31135" /db_xref="GeneID:2847773" ncRNA 189712..189847 /gene="tff" /locus_tag="b4414" /gene_synonym="ECK0167; JWR0225; t44" /ncRNA_class="other" /product="novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047239" /db_xref="ECOCYC:G0-8895" /db_xref="EcoGene:EG31135" /db_xref="GeneID:2847773" gene 189874..190599 /gene="rpsB" /locus_tag="b0169" /gene_synonym="ECK0168; JW0164" /db_xref="ECOCYC:EG10901" /db_xref="EcoGene:EG10901" /db_xref="GeneID:947874" CDS 189874..190599 /gene="rpsB" /locus_tag="b0169" /gene_synonym="ECK0168; JW0164" /function="structural component; Ribosomal proteins - synthesis, modification" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0003735 - structural constituent of ribosome" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S2" /protein_id="NP_414711.1" /db_xref="GI:16128162" /db_xref="ASAP:ABE-0000575" /db_xref="UniProtKB/Swiss-Prot:P0A7V0" /db_xref="ECOCYC:EG10901" /db_xref="EcoGene:EG10901" /db_xref="GeneID:947874" /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT NWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA ATVREGRSQDLASQAEESFVEAE" mat_peptide 189877..190596 /gene="rpsB" /locus_tag="b0169" /gene_synonym="ECK0168; JW0164" /product="30S ribosomal subunit protein S2" /experiment="N-terminus verified by Edman degradation: PMID 1575737,7023985,9298646,10739205" gene 190857..191708 /gene="tsf" /locus_tag="b0170" /gene_synonym="ECK0169; JW0165" /db_xref="ECOCYC:EG11033" /db_xref="EcoGene:EG11033" /db_xref="GeneID:944866" CDS 190857..191708 /gene="tsf" /locus_tag="b0170" /gene_synonym="ECK0169; JW0165" /function="factor; Proteins - translation and modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="protein chain elongation factor EF-Ts" /protein_id="NP_414712.1" /db_xref="GI:16128163" /db_xref="ASAP:ABE-0000579" /db_xref="UniProtKB/Swiss-Prot:P0A6P1" /db_xref="ECOCYC:EG11033" /db_xref="EcoGene:EG11033" /db_xref="GeneID:944866" /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV AAMSKQS" mat_peptide 190860..191705 /gene="tsf" /locus_tag="b0170" /gene_synonym="ECK0169; JW0165" /product="protein chain elongation factor EF-Ts" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9298646,9600841,9740056" gene 191855..192580 /gene="pyrH" /locus_tag="b0171" /gene_synonym="ECK0170; JW0166; smbA; umk" /db_xref="ECOCYC:EG11539" /db_xref="EcoGene:EG11539" /db_xref="GeneID:944989" CDS 191855..192580 /gene="pyrH" /locus_tag="b0171" /gene_synonym="ECK0170; JW0166; smbA; umk" /EC_number="2.7.4.-" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="uridylate kinase" /protein_id="NP_414713.1" /db_xref="GI:16128164" /db_xref="ASAP:ABE-0000582" /db_xref="UniProtKB/Swiss-Prot:P0A7E9" /db_xref="ECOCYC:EG11539" /db_xref="EcoGene:EG11539" /db_xref="GeneID:944989" /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF NMNKPGALRRVVMGEKEGTLITE" mat_peptide 191858..192577 /gene="pyrH" /locus_tag="b0171" /gene_synonym="ECK0170; JW0166; smbA; umk" /product="uridylate kinase" /experiment="N-terminus verified by Edman degradation: PMID 7711027" gene 192872..193429 /gene="frr" /locus_tag="b0172" /gene_synonym="ECK0171; JW0167; rrf" /db_xref="ECOCYC:EG10335" /db_xref="EcoGene:EG10335" /db_xref="GeneID:946122" CDS 192872..193429 /gene="frr" /locus_tag="b0172" /gene_synonym="ECK0171; JW0167; rrf" /function="factor; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 2684966,8740179,9298646" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006412 - translation; GO:0009386 - translational attenuation" /note="ribosome releasing factor" /codon_start=1 /transl_table=11 /product="ribosome recycling factor" /protein_id="NP_414714.1" /db_xref="GI:16128165" /db_xref="ASAP:ABE-0000588" /db_xref="UniProtKB/Swiss-Prot:P0A805" /db_xref="ECOCYC:EG10335" /db_xref="EcoGene:EG10335" /db_xref="GeneID:946122" /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV QKLTDAAIKKIEAALADKEAELMQF" gene 193521..194717 /gene="dxr" /locus_tag="b0173" /gene_synonym="ECK0172; ispC; JW0168; yaeM" /db_xref="ECOCYC:EG12715" /db_xref="EcoGene:EG12715" /db_xref="GeneID:945019" CDS 193521..194717 /gene="dxr" /locus_tag="b0173" /gene_synonym="ECK0172; ispC; JW0168; yaeM" /EC_number="1.1.1.267" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /protein_id="NP_414715.1" /db_xref="GI:16128166" /db_xref="ASAP:ABE-0000592" /db_xref="UniProtKB/Swiss-Prot:P45568" /db_xref="ECOCYC:EG12715" /db_xref="EcoGene:EG12715" /db_xref="GeneID:945019" /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE VMRLAS" gene 194903..195664 /gene="ispU" /locus_tag="b0174" /gene_synonym="ECK0173; JW0169; rth; uppS; yaeS" /db_xref="ECOCYC:G6092" /db_xref="EcoGene:EG13329" /db_xref="GeneID:944874" CDS 194903..195664 /gene="ispU" /locus_tag="b0174" /gene_synonym="ECK0173; JW0169; rth; uppS; yaeS" /EC_number="2.5.1.31" /experiment="N-terminus verified by Edman degradation: PMID 9882662" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /note="undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase)" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate synthase" /protein_id="NP_414716.1" /db_xref="GI:16128167" /db_xref="ASAP:ABE-0000595" /db_xref="UniProtKB/Swiss-Prot:P60472" /db_xref="ECOCYC:G6092" /db_xref="EcoGene:EG13329" /db_xref="GeneID:944874" /translation="MMLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHK AGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHR HNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAE KVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTD VLWPDFDEQDFEGALNAFANRERRFGGTEPGDETA" gene 195677..196534 /gene="cdsA" /locus_tag="b0175" /gene_synonym="ECK0174; JW5810" /db_xref="ECOCYC:EG10139" /db_xref="EcoGene:EG10139" /db_xref="GeneID:944876" CDS 195677..196534 /gene="cdsA" /locus_tag="b0175" /gene_synonym="ECK0174; JW5810" /EC_number="2.7.7.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0008654 - phospholipid biosynthetic process" /note="CDP-diglyceride synthetase" /codon_start=1 /transl_table=11 /product="CDP-diglyceride synthase" /protein_id="NP_414717.2" /db_xref="GI:90111095" /db_xref="ASAP:ABE-0000600" /db_xref="UniProtKB/Swiss-Prot:P0ABG1" /db_xref="ECOCYC:EG10139" /db_xref="EcoGene:EG10139" /db_xref="GeneID:944876" /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVALLL VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC LLLLVFRTL" gene 196546..197898 /gene="rseP" /locus_tag="b0176" /gene_synonym="ecfE; ECK0175; JW0171; yaeL" /db_xref="ECOCYC:EG12436" /db_xref="EcoGene:EG12436" /db_xref="GeneID:944871" CDS 196546..197898 /gene="rseP" /locus_tag="b0176" /gene_synonym="ecfE; ECK0175; JW0171; yaeL" /EC_number="3.4.24.-" /codon_start=1 /transl_table=11 /product="inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA" /protein_id="NP_414718.1" /db_xref="GI:16128169" /db_xref="ASAP:ABE-0000603" /db_xref="UniProtKB/Swiss-Prot:P0AEH1" /db_xref="ECOCYC:EG12436" /db_xref="EcoGene:EG12436" /db_xref="GeneID:944871" /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR GPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI INLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL" gene 197928..200360 /gene="bamA" /locus_tag="b0177" /gene_synonym="ecfK; ECK0176; JW0172; omp85; yaeT; yzzN; yzzY" /db_xref="ECOCYC:G6093" /db_xref="EcoGene:EG12676" /db_xref="GeneID:944870" CDS 197928..200360 /gene="bamA" /locus_tag="b0177" /gene_synonym="ecfK; ECK0176; JW0172; omp85; yaeT; yzzN; yzzY" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative outer membrane antigen" /codon_start=1 /transl_table=11 /product="outer membrane protein assembly factor, forms pores; required for OM biogenesis; in BamABCD OM protein complex" /protein_id="NP_414719.1" /db_xref="GI:16128170" /db_xref="ASAP:ABE-0000605" /db_xref="UniProtKB/Swiss-Prot:P0A940" /db_xref="ECOCYC:G6093" /db_xref="EcoGene:EG12676" /db_xref="GeneID:944870" /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK AEQFQFNIGKTW" mat_peptide 197988..200357 /gene="bamA" /locus_tag="b0177" /gene_synonym="ecfK; ECK0176; JW0172; omp85; yaeT; yzzN; yzzY" /product="outer membrane protein assembly factor, forms pores; required for OM biogenesis; in BamABCD OM protein complex" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene 200482..200967 /gene="skp" /locus_tag="b0178" /gene_synonym="ECK0177; hlpA; JW0173; ompH" /db_xref="ECOCYC:EG10455" /db_xref="EcoGene:EG10455" /db_xref="GeneID:944861" CDS 200482..200967 /gene="skp" /locus_tag="b0178" /gene_synonym="ECK0177; hlpA; JW0173; ompH" /function="factor; Basic proteins - synthesis, modification" /GO_component="GO:0009274 - peptidoglycan-based cell wall; GO:0042597 - periplasmic space" /GO_process="GO:0006457 - protein folding" /note="periplasmic molecular chaperone for outer membrane proteins" /codon_start=1 /transl_table=11 /product="periplasmic chaperone" /protein_id="NP_414720.1" /db_xref="GI:16128171" /db_xref="ASAP:ABE-0000608" /db_xref="UniProtKB/Swiss-Prot:P0AEU7" /db_xref="ECOCYC:EG10455" /db_xref="EcoGene:EG10455" /db_xref="GeneID:944861" /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV K" mat_peptide 200542..200964 /gene="skp" /locus_tag="b0178" /gene_synonym="ECK0177; hlpA; JW0173; ompH" /product="periplasmic chaperone" /experiment="N-terminus verified by Edman degradation: PMID 2167239,2843433,9298646" gene 200971..201996 /gene="lpxD" /locus_tag="b0179" /gene_synonym="ECK0178; firA; JW0174; omsA; ssc" /db_xref="ECOCYC:EG10316" /db_xref="EcoGene:EG10316" /db_xref="GeneID:944882" CDS 200971..201996 /gene="lpxD" /locus_tag="b0179" /gene_synonym="ECK0178; firA; JW0174; omsA; ssc" /EC_number="2.3.1.-" /function="enzyme; Surface polysaccharides & antigens" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase" /protein_id="NP_414721.1" /db_xref="GI:16128172" /db_xref="ASAP:ABE-0000610" /db_xref="UniProtKB/Swiss-Prot:P21645" /db_xref="ECOCYC:EG10316" /db_xref="EcoGene:EG10316" /db_xref="GeneID:944882" /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG ALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE RKVNQQD" mat_peptide 200974..201993 /gene="lpxD" /locus_tag="b0179" /gene_synonym="ECK0178; firA; JW0174; omsA; ssc" /product="UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase" /experiment="N-terminus verified by Edman degradation: PMID 2115869" gene 202101..202556 /gene="fabZ" /locus_tag="b0180" /gene_synonym="ECK0179; JW0175; sabA; sefA; sfhC; yaeA" /db_xref="ECOCYC:EG11284" /db_xref="EcoGene:EG11284" /db_xref="GeneID:944888" CDS 202101..202556 /gene="fabZ" /locus_tag="b0180" /gene_synonym="ECK0179; JW0175; sabA; sefA; sfhC; yaeA" /EC_number="4.2.1.-" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 8354462" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="(3R)-hydroxymyristol acyl carrier protein dehydratase" /protein_id="NP_414722.1" /db_xref="GI:16128173" /db_xref="ASAP:ABE-0000613" /db_xref="UniProtKB/Swiss-Prot:P0A6Q6" /db_xref="ECOCYC:EG11284" /db_xref="EcoGene:EG11284" /db_xref="GeneID:944888" /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA" gene 202560..203348 /gene="lpxA" /locus_tag="b0181" /gene_synonym="ECK0180; JW0176" /db_xref="ECOCYC:EG10545" /db_xref="EcoGene:EG10545" /db_xref="GeneID:944849" CDS 202560..203348 /gene="lpxA" /locus_tag="b0181" /gene_synonym="ECK0180; JW0176" /EC_number="2.3.1.129" /function="enzyme; Surface polysaccharides & antigens" /experiment="N-terminus verified by Edman degradation: PMID 8366124" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009245 - lipid A biosynthetic process" /note="UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine acetyltransferase" /protein_id="NP_414723.1" /db_xref="GI:16128174" /db_xref="ASAP:ABE-0000618" /db_xref="UniProtKB/Swiss-Prot:P0A722" /db_xref="ECOCYC:EG10545" /db_xref="EcoGene:EG10545" /db_xref="GeneID:944849" /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR" gene 203348..204496 /gene="lpxB" /locus_tag="b0182" /gene_synonym="ECK0181; JW0177; pgsB" /db_xref="ECOCYC:EG10546" /db_xref="EcoGene:EG10546" /db_xref="GeneID:944838" CDS 203348..204496 /gene="lpxB" /locus_tag="b0182" /gene_synonym="ECK0181; JW0177; pgsB" /EC_number="2.4.1.182" /function="enzyme; Macromolecule metabolism: Lipopolysaccharide" /experiment="N-terminus verified by Edman degradation: PMID 3049593" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009245 - lipid A biosynthetic process" /note="tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step" /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide-1-P synthase" /protein_id="NP_414724.1" /db_xref="GI:16128175" /db_xref="ASAP:ABE-0000620" /db_xref="UniProtKB/Swiss-Prot:P10441" /db_xref="ECOCYC:EG10546" /db_xref="EcoGene:EG10546" /db_xref="GeneID:944838" /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKEHVPNARFVGVAGP RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLASG TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP QKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLELAQ" gene 204493..205089 /gene="rnhB" /locus_tag="b0183" /gene_synonym="ECK0182; JW0178" /db_xref="ECOCYC:EG10861" /db_xref="EcoGene:EG10861" /db_xref="GeneID:944852" CDS 204493..205089 /gene="rnhB" /locus_tag="b0183" /gene_synonym="ECK0182; JW0178" /EC_number="3.1.26.4" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 2172991" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006401 - RNA catabolic process" /note="RNAse HII, degrades RNA of DNA-RNA hybrids" /codon_start=1 /transl_table=11 /product="ribonuclease HII, degrades RNA of DNA-RNA hybrids" /protein_id="NP_414725.1" /db_xref="GI:16128176" /db_xref="ASAP:ABE-0000622" /db_xref="UniProtKB/Swiss-Prot:P10442" /db_xref="ECOCYC:EG10861" /db_xref="EcoGene:EG10861" /db_xref="GeneID:944852" /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN DSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS" gene 205126..208608 /gene="dnaE" /locus_tag="b0184" /gene_synonym="ECK0183; JW0179; polC; sdgC" /db_xref="ECOCYC:EG10238" /db_xref="EcoGene:EG10238" /db_xref="GeneID:944877" CDS 205126..208608 /gene="dnaE" /locus_tag="b0184" /gene_synonym="ECK0183; JW0179; polC; sdgC" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /note="DNA polymerase III, alpha subunit" /codon_start=1 /transl_table=11 /product="DNA polymerase III alpha subunit" /protein_id="NP_414726.1" /db_xref="GI:16128177" /db_xref="ASAP:ABE-0000624" /db_xref="UniProtKB/Swiss-Prot:P10443" /db_xref="ECOCYC:EG10238" /db_xref="EcoGene:EG10238" /db_xref="GeneID:944877" /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQ MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAEL AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISL TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL RGLIGSEQVELEFD" gene 208621..209580 /gene="accA" /locus_tag="b0185" /gene_synonym="ECK0184; JW0180" /db_xref="ECOCYC:EG11647" /db_xref="EcoGene:EG11647" /db_xref="GeneID:944895" CDS 208621..209580 /gene="accA" /locus_tag="b0185" /gene_synonym="ECK0184; JW0180" /EC_number="6.4.1.2" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /GO_component="GO:0005737 - cytoplasm" /note="acetylCoA carboxylase, carboxytransferase component, alpha subunit" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, carboxytransferase, alpha subunit" /protein_id="NP_414727.1" /db_xref="GI:16128178" /db_xref="ASAP:ABE-0000630" /db_xref="UniProtKB/Swiss-Prot:P0ABD5" /db_xref="ECOCYC:EG11647" /db_xref="EcoGene:EG11647" /db_xref="GeneID:944895" /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA" mat_peptide 208624..209577 /gene="accA" /locus_tag="b0185" /gene_synonym="ECK0184; JW0180" /product="acetyl-CoA carboxylase, carboxytransferase, alpha subunit" /experiment="N-terminus verified by Edman degradation: PMID 1355089,9298646" gene 209679..211820 /gene="ldcC" /locus_tag="b0186" /gene_synonym="ECK0185; JW0181; ldc; ldcH" /db_xref="ECOCYC:G6094" /db_xref="EcoGene:EG13219" /db_xref="GeneID:944887" CDS 209679..211820 /gene="ldcC" /locus_tag="b0186" /gene_synonym="ECK0185; JW0181; ldc; ldcH" /EC_number="4.1.1.18" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /experiment="N-terminus verified by Edman degradation: PMID 9226257,9339543" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0006096 - glycolysis" /codon_start=1 /transl_table=11 /product="lysine decarboxylase 2, constitutive" /protein_id="NP_414728.1" /db_xref="GI:16128179" /db_xref="ASAP:ABE-0000633" /db_xref="UniProtKB/Swiss-Prot:P52095" /db_xref="ECOCYC:G6094" /db_xref="EcoGene:EG13219" /db_xref="GeneID:944887" /translation="MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLK FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWF FEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQK SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTN GTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIP RREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWV PYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEA FMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWF FDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG IPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRI KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAW QRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSV GQHYPGFETDIHGAKQDEDGVYRVRVLKMAG" gene 211877..212266 /gene="yaeR" /locus_tag="b0187" /gene_synonym="ECK0186; JW0182" /db_xref="ECOCYC:G6095" /db_xref="EcoGene:EG13224" /db_xref="GeneID:944875" CDS 211877..212266 /gene="yaeR" /locus_tag="b0187" /gene_synonym="ECK0186; JW0182" /codon_start=1 /transl_table=11 /product="predicted lyase" /protein_id="NP_414729.4" /db_xref="GI:90111096" /db_xref="ASAP:ABE-0000635" /db_xref="UniProtKB/Swiss-Prot:P52096" /db_xref="ECOCYC:G6095" /db_xref="EcoGene:EG13224" /db_xref="GeneID:944875" /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCET IRVDPYTQKRFTFFNDPDGLPLELYEQ" gene 212331..213629 /gene="tilS" /locus_tag="b0188" /gene_synonym="ECK0187; JW0183; mesJ; yaeN" /db_xref="ECOCYC:G6096" /db_xref="EcoGene:EG13220" /db_xref="GeneID:944889" CDS 212331..213629 /gene="tilS" /locus_tag="b0188" /gene_synonym="ECK0187; JW0183; mesJ; yaeN" /EC_number="6.1.1.5" /function="responsible for lysidine formation in tRNA-Ile anticodon (C34 to L34)" /codon_start=1 /transl_table=11 /product="tRNA(Ile)-lysidine synthetase" /protein_id="NP_414730.1" /db_xref="GI:16128181" /db_xref="ASAP:ABE-0000638" /db_xref="UniProtKB/Swiss-Prot:P52097" /db_xref="ECOCYC:G6096" /db_xref="EcoGene:EG13220" /db_xref="GeneID:944889" /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVAL RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR GELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE QESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSENIVPWQTWLQPLELPA GLGSVQLNAGGDIRPPRADEAVSVRFKAPGLLHIVGRNGGRKLKKIWQELGVPPWLRD TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS" repeat_region 213632..213668 /note="REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(213678..213932) /gene="rof" /locus_tag="b0189" /gene_synonym="ECK0188; JW0184; mesJ; yaeO" /db_xref="ECOCYC:G6097" /db_xref="EcoGene:EG13221" /db_xref="GeneID:944891" CDS complement(213678..213932) /gene="rof" /locus_tag="b0189" /gene_synonym="ECK0188; JW0184; mesJ; yaeO" /experiment="N-terminus verified by Edman degradation: PMID 10739205" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="modulator of Rho-dependent transcription termination" /protein_id="NP_414731.2" /db_xref="GI:90111097" /db_xref="ASAP:ABE-0000641" /db_xref="UniProtKB/Swiss-Prot:P0AFW8" /db_xref="ECOCYC:G6097" /db_xref="EcoGene:EG13221" /db_xref="GeneID:944891" /translation="MNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLV SRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES" gene complement(213925..214125) /gene="yaeP" /locus_tag="b4406" /gene_synonym="ECK0189; JW0185" /db_xref="ECOCYC:G372" /db_xref="EcoGene:EG13222" /db_xref="GeneID:1450233" CDS complement(213925..214125) /gene="yaeP" /locus_tag="b4406" /gene_synonym="ECK0189; JW0185" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="YP_026160.1" /db_xref="GI:49176004" /db_xref="ASAP:ABE-0047214" /db_xref="UniProtKB/Swiss-Prot:P0A8K5" /db_xref="ECOCYC:G372" /db_xref="EcoGene:EG13222" /db_xref="GeneID:1450233" /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS EAVREKAAYAAANLLVSDYVNE" gene 214291..214836 /gene="yaeQ" /locus_tag="b0190" /gene_synonym="ECK0190; JW0186" /db_xref="ECOCYC:G6098" /db_xref="EcoGene:EG13223" /db_xref="GeneID:946809" CDS 214291..214836 /gene="yaeQ" /locus_tag="b0190" /gene_synonym="ECK0190; JW0186" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414732.1" /db_xref="GI:16128183" /db_xref="ASAP:ABE-0000648" /db_xref="UniProtKB/Swiss-Prot:P0AA97" /db_xref="ECOCYC:G6098" /db_xref="EcoGene:EG13223" /db_xref="GeneID:946809" /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV IWLSDDKNNLEVNLTAWQQPS" gene 214833..215255 /gene="yaeJ" /locus_tag="b0191" /gene_synonym="ECK0191; JW0187" /db_xref="ECOCYC:EG12354" /db_xref="EcoGene:EG12354" /db_xref="GeneID:946046" CDS 214833..215255 /gene="yaeJ" /locus_tag="b0191" /gene_synonym="ECK0191; JW0187" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414733.1" /db_xref="GI:16128184" /db_xref="ASAP:ABE-0000650" /db_xref="UniProtKB/Swiss-Prot:P40711" /db_xref="ECOCYC:EG12354" /db_xref="EcoGene:EG12354" /db_xref="GeneID:946046" /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEK KARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE" gene 215269..215979 /gene="nlpE" /locus_tag="b0192" /gene_synonym="cutF; ECK0192; JW0188" /db_xref="ECOCYC:EG12137" /db_xref="EcoGene:EG12137" /db_xref="GeneID:946782" CDS 215269..215979 /gene="nlpE" /locus_tag="b0192" /gene_synonym="cutF; ECK0192; JW0188" /function="putative transport; Detoxification" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006805 - xenobiotic metabolic process" /note="copper homeostasis protein (lipoprotein)" /codon_start=1 /transl_table=11 /product="lipoprotein involved with copper homeostasis and adhesion" /protein_id="NP_414734.1" /db_xref="GI:16128185" /db_xref="ASAP:ABE-0000652" /db_xref="UniProtKB/Swiss-Prot:P40710" /db_xref="ECOCYC:EG12137" /db_xref="EcoGene:EG12137" /db_xref="GeneID:946782" /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAA TFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLA PDTAGKFYPNQDCSSLGQ" repeat_region 216027..216137 /note="RIP16 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(216179..217003) /gene="yaeF" /locus_tag="b0193" /gene_synonym="ECK0193; JW5016; yaeK" /db_xref="ECOCYC:EG12138" /db_xref="EcoGene:EG12138" /db_xref="GeneID:944892" CDS complement(216179..217003) /gene="yaeF" /locus_tag="b0193" /gene_synonym="ECK0193; JW5016; yaeK" /codon_start=1 /transl_table=11 /product="predicted lipoprotein" /protein_id="NP_414735.4" /db_xref="GI:90111098" /db_xref="ASAP:ABE-0000655" /db_xref="UniProtKB/Swiss-Prot:P37056" /db_xref="ECOCYC:EG12138" /db_xref="EcoGene:EG12138" /db_xref="GeneID:944892" /translation="MDKPKAYCRLFLPSFLLLSACTVDISQPDPSATAVDAEAKTWAV KFQHQSSFTEQSIKEITAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNN VAEATGAGVQIVSLKKAMKHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIV EFIPFMVTRQMCSLNPFSEDFRQQCVSGLAKAQLSSVGEGDKKSWFCSEFVTDAFAKA GHPLTLAQSGWISPADLMHMRIGDVSAFKPETQLQYVGHLKPGIYIKAGRFVGLTR" gene complement(217057..218775) /gene="proS" /locus_tag="b0194" /gene_synonym="drpA; ECK0194; JW0190" /db_xref="ECOCYC:EG10770" /db_xref="EcoGene:EG10770" /db_xref="GeneID:949116" CDS complement(217057..218775) /gene="proS" /locus_tag="b0194" /gene_synonym="drpA; ECK0194; JW0190" /EC_number="6.1.1.15" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 2203971,9298646" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="proline tRNA synthetase" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /protein_id="NP_414736.1" /db_xref="GI:16128187" /db_xref="ASAP:ABE-0000657" /db_xref="UniProtKB/Swiss-Prot:P16659" /db_xref="ECOCYC:EG10770" /db_xref="EcoGene:EG10770" /db_xref="GeneID:949116" /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK TVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA GDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL VKQIKG" gene complement(218887..219594) /gene="yaeB" /locus_tag="b0195" /gene_synonym="ECK0195; JW0191" /db_xref="ECOCYC:EG11503" /db_xref="EcoGene:EG11503" /db_xref="GeneID:949112" CDS complement(218887..219594) /gene="yaeB" /locus_tag="b0195" /gene_synonym="ECK0195; JW0191" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0066 family" /protein_id="NP_414737.1" /db_xref="GI:16128188" /db_xref="ASAP:ABE-0000661" /db_xref="UniProtKB/Swiss-Prot:P28634" /db_xref="ECOCYC:EG11503" /db_xref="EcoGene:EG11503" /db_xref="GeneID:949112" /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNV RWRVTDAGFEVFALEPR" gene complement(219591..219995) /gene="rcsF" /locus_tag="b0196" /gene_synonym="ECK0196; JW0192" /db_xref="ECOCYC:EG11502" /db_xref="EcoGene:EG11502" /db_xref="GeneID:949113" CDS complement(219591..219995) /gene="rcsF" /locus_tag="b0196" /gene_synonym="ECK0196; JW0192" /function="regulator; Surface polysaccharides & antigens" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009242 - colanic acid biosynthetic process" /note="regulator in colanic acid synthesis; interacts with RcsB" /codon_start=1 /transl_table=11 /product="predicted outer membrane protein, signal" /protein_id="NP_414738.1" /db_xref="GI:16128189" /db_xref="ASAP:ABE-0000663" /db_xref="UniProtKB/Swiss-Prot:P69411" /db_xref="ECOCYC:EG11502" /db_xref="EcoGene:EG11502" /db_xref="GeneID:949113" /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK" gene complement(220113..220928) /gene="metQ" /locus_tag="b0197" /gene_synonym="ECK0197; JW0193; metD; yaeC" /db_xref="ECOCYC:EG11504" /db_xref="EcoGene:EG11504" /db_xref="GeneID:944893" CDS complement(220113..220928) /gene="metQ" /locus_tag="b0197" /gene_synonym="ECK0197; JW0193; metD; yaeC" /function="Transport of small molecules: Amino acids, amines" /function="4.3.A.1.p transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component" /function="6.1 cell structure; membrane" /function="7.2 location of gene products; periplasmic space" /GO_component="GO:0009274 - peptidoglycan-based cell wall; GO:0042597 - periplasmic space" /note="D-methionine transport protein (ABC superfamily, peri_bind)" /codon_start=1 /transl_table=11 /product="DL-methionine transporter subunit" /protein_id="NP_414739.1" /db_xref="GI:16128190" /db_xref="ASAP:ABE-0000666" /db_xref="UniProtKB/Swiss-Prot:P28635" /db_xref="ECOCYC:EG11504" /db_xref="EcoGene:EG11504" /db_xref="GeneID:944893" /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI FVEDKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW" gene complement(220968..221621) /gene="metI" /locus_tag="b0198" /gene_synonym="ECK0198; JW0194; metD; yaeE" /db_xref="ECOCYC:EG11737" /db_xref="EcoGene:EG11737" /db_xref="GeneID:944894" CDS complement(220968..221621) /gene="metI" /locus_tag="b0198" /gene_synonym="ECK0198; JW0194; metD; yaeE" /function="Transport of small molecules: Amino acids, amines" /function="4.3.A.1.m transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component" /function="6.1 cell structure; membrane" /function="7.3 location of gene products; inner membrane" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="D- and L-methionine transport protein (ABC superfamily, membrane)" /codon_start=1 /transl_table=11 /product="DL-methionine transporter subunit" /protein_id="NP_414740.1" /db_xref="GI:16128191" /db_xref="ASAP:ABE-0000668" /db_xref="UniProtKB/Swiss-Prot:P31547" /db_xref="ECOCYC:EG11737" /db_xref="EcoGene:EG11737" /db_xref="GeneID:944894" /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK" gene complement(221614..222645) /gene="metN" /locus_tag="b0199" /gene_synonym="abc; ECK0199; JW0195; metD" /db_xref="ECOCYC:EG11621" /db_xref="EcoGene:EG11621" /db_xref="GeneID:944896" CDS complement(221614..222645) /gene="metN" /locus_tag="b0199" /gene_synonym="abc; ECK0199; JW0195; metD" /function="Transport of small molecules: Amino acids, amines" /function="4.3.A.1.a transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component" /function="7.1 location of gene products; cytoplasm" /GO_component="GO:0005737 - cytoplasm" /note="D- and L-methionine transport protein (ABC superfamily, atp_bind)" /codon_start=1 /transl_table=11 /product="DL-methionine transporter subunit" /protein_id="NP_414741.1" /db_xref="GI:16128192" /db_xref="ASAP:ABE-0000671" /db_xref="UniProtKB/Swiss-Prot:P30750" /db_xref="ECOCYC:EG11621" /db_xref="EcoGene:EG11621" /db_xref="GeneID:944896" /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN VALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH VKVEVLGYV" gene 222833..223408 /gene="gmhB" /locus_tag="b0200" /gene_synonym="ECK0200; gmbC; gmbX; JW0196; wcbN; yaeD" /db_xref="ECOCYC:EG11736" /db_xref="EcoGene:EG11736" /db_xref="GeneID:944879" CDS 222833..223408 /gene="gmhB" /locus_tag="b0200" /gene_synonym="ECK0200; gmbC; gmbX; JW0196; wcbN; yaeD" /function="enzyme; Surface polysaccharides and antigens" /codon_start=1 /transl_table=11 /product="D,D-heptose 1,7-bisphosphate phosphatase" /protein_id="NP_414742.1" /db_xref="GI:16128193" /db_xref="ASAP:ABE-0000675" /db_xref="UniProtKB/Swiss-Prot:P63228" /db_xref="ECOCYC:EG11736" /db_xref="EcoGene:EG11736" /db_xref="GeneID:944879" /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK MGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKP ITPEAENAADWVLNSLADLPQAIKKQQKPAQ" gene 223771..225312 /gene="rrsH" /locus_tag="b0201" /gene_synonym="ECK0201; JWR0001" /db_xref="ECOCYC:EG30090" /db_xref="EcoGene:EG30090" /db_xref="GeneID:944897" rRNA 223771..225312 /gene="rrsH" /locus_tag="b0201" /gene_synonym="ECK0201; JWR0001" /product="16S ribosomal RNA of rrnH operon" /db_xref="ASAP:ABE-0000677" /db_xref="ECOCYC:EG30090" /db_xref="EcoGene:EG30090" /db_xref="GeneID:944897" gene 225381..225457 /gene="ileV" /locus_tag="b0202" /gene_synonym="ECK0202; JWR0002" /db_xref="ECOCYC:EG30045" /db_xref="EcoGene:EG30045" /db_xref="GeneID:944884" tRNA 225381..225457 /gene="ileV" /locus_tag="b0202" /gene_synonym="ECK0202; JWR0002" /product="tRNA-Ile" /note="anticodon: GAU" /db_xref="ASAP:ABE-0000679" /db_xref="ECOCYC:EG30045" /db_xref="EcoGene:EG30045" /db_xref="GeneID:944884" gene 225500..225575 /gene="alaV" /locus_tag="b0203" /gene_synonym="ECK0203; JWR0003" /db_xref="ECOCYC:EG30010" /db_xref="EcoGene:EG30010" /db_xref="GeneID:944890" tRNA 225500..225575 /gene="alaV" /locus_tag="b0203" /gene_synonym="ECK0203; JWR0003" /product="tRNA-Ala" /note="anticodon: UGC" /db_xref="ASAP:ABE-0000682" /db_xref="ECOCYC:EG30010" /db_xref="EcoGene:EG30010" /db_xref="GeneID:944890" gene 225759..228662 /gene="rrlH" /locus_tag="b0204" /gene_synonym="ECK0204; JWR0004" /db_xref="ECOCYC:EG30083" /db_xref="EcoGene:EG30083" /db_xref="GeneID:944900" rRNA 225759..228662 /gene="rrlH" /locus_tag="b0204" /gene_synonym="ECK0204; JWR0004" /product="23S ribosomal RNA of rrnH operon" /db_xref="ASAP:ABE-0000684" /db_xref="ECOCYC:EG30083" /db_xref="EcoGene:EG30083" /db_xref="GeneID:944900" gene 228756..228875 /gene="rrfH" /locus_tag="b0205" /gene_synonym="ECK0205; JWR0005" /db_xref="ECOCYC:EG30076" /db_xref="EcoGene:EG30076" /db_xref="GeneID:944898" rRNA 228756..228875 /gene="rrfH" /locus_tag="b0205" /gene_synonym="ECK0205; JWR0005" /product="5S ribosomal RNA of rrnH operon" /db_xref="ASAP:ABE-0000686" /db_xref="ECOCYC:EG30076" /db_xref="EcoGene:EG30076" /db_xref="GeneID:944898" gene 228928..229004 /gene="aspU" /locus_tag="b0206" /gene_synonym="ECK0206; JWR0006" /db_xref="ECOCYC:EG30024" /db_xref="EcoGene:EG30024" /db_xref="GeneID:944880" tRNA 228928..229004 /gene="aspU" /locus_tag="b0206" /gene_synonym="ECK0206; JWR0006" /product="tRNA-Asp" /note="anticodon: GUC" /db_xref="ASAP:ABE-0000688" /db_xref="ECOCYC:EG30024" /db_xref="EcoGene:EG30024" /db_xref="GeneID:944880" gene 229167..229970 /gene="dkgB" /locus_tag="b0207" /gene_synonym="ECK0207; JW0197; yafB" /db_xref="ECOCYC:EG11648" /db_xref="EcoGene:EG11648" /db_xref="GeneID:944901" CDS 229167..229970 /gene="dkgB" /locus_tag="b0207" /gene_synonym="ECK0207; JW0197; yafB" /EC_number="1.1.1.274" /function="putative enzyme; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconate reductase B" /protein_id="NP_414743.1" /db_xref="GI:16128194" /db_xref="ASAP:ABE-0000692" /db_xref="UniProtKB/Swiss-Prot:P30863" /db_xref="ECOCYC:EG11648" /db_xref="EcoGene:EG11648" /db_xref="GeneID:944901" /translation="MAIPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAA VGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPN DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQ NRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSV IPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD" gene complement(229967..230881) /gene="yafC" /locus_tag="b0208" /gene_synonym="ECK0208; JW0198" /db_xref="ECOCYC:EG11649" /db_xref="EcoGene:EG11649" /db_xref="GeneID:947507" CDS complement(229967..230881) /gene="yafC" /locus_tag="b0208" /gene_synonym="ECK0208; JW0198" /function="putative transport; Not classified" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator LYSR-type" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_414744.1" /db_xref="GI:16128195" /db_xref="ASAP:ABE-0000694" /db_xref="UniProtKB/Swiss-Prot:P30864" /db_xref="ECOCYC:EG11649" /db_xref="EcoGene:EG11649" /db_xref="GeneID:947507" /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF NSYRKIIASPDYISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGL SSNSGETLKQLCLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDR AVSTRIRAFIDFLSEHVKTAPGGAVREA" gene 231122..231922 /gene="yafD" /locus_tag="b0209" /gene_synonym="ECK0209; JW5017" /db_xref="ECOCYC:EG11650" /db_xref="EcoGene:EG11650" /db_xref="GeneID:946286" CDS 231122..231922 /gene="yafD" /locus_tag="b0209" /gene_synonym="ECK0209; JW5017" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414745.1" /db_xref="GI:16128196" /db_xref="ASAP:ABE-0000700" /db_xref="UniProtKB/Swiss-Prot:P0A8U2" /db_xref="ECOCYC:EG11650" /db_xref="EcoGene:EG11650" /db_xref="GeneID:946286" /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK" gene 231926..232549 /gene="yafE" /locus_tag="b0210" /gene_synonym="ECK0210; JW0200" /db_xref="ECOCYC:EG11651" /db_xref="EcoGene:EG11651" /db_xref="GeneID:946197" CDS 231926..232549 /gene="yafE" /locus_tag="b0210" /gene_synonym="ECK0210; JW0200" /function="putative enzyme; Not classified" /GO_process="GO:0009102 - biotin biosynthetic process" /note="putative biotin synthesis protein" /codon_start=1 /transl_table=11 /product="predicted S-adenosyl-L-methionine-dependent methyltransferase" /protein_id="NP_414746.1" /db_xref="GI:16128197" /db_xref="ASAP:ABE-0000702" /db_xref="UniProtKB/Swiss-Prot:P30866" /db_xref="ECOCYC:EG11651" /db_xref="EcoGene:EG11651" /db_xref="GeneID:946197" /translation="MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKN ITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP GHPVRDIWLQTVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVAR MRTPEALVDAIRIYQQSASTEVRTYFALQNDGFFTSDIIMVDAHKAA" gene complement(232597..233955) /gene="mltD" /locus_tag="b0211" /gene_synonym="dniR; ECK0211; JW5018; yafG" /db_xref="ECOCYC:EG10246" /db_xref="EcoGene:EG10246" /db_xref="GeneID:945694" CDS complement(232597..233955) /gene="mltD" /locus_tag="b0211" /gene_synonym="dniR; ECK0211; JW5018; yafG" /EC_number="3.2.1.-" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0009061 - anaerobic respiration; GO:0017004 - cytochrome complex assembly; GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="predicted membrane-bound lytic murein transglycosylase D" /protein_id="NP_414747.1" /db_xref="GI:16128198" /db_xref="ASAP:ABE-0000704" /db_xref="UniProtKB/Swiss-Prot:P0AEZ7" /db_xref="ECOCYC:EG10246" /db_xref="EcoGene:EG10246" /db_xref="GeneID:945694" /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVAD NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP DS" gene complement(234027..234782) /gene="gloB" /locus_tag="b0212" /gene_synonym="ECK0212; JW0202; yafR" /db_xref="ECOCYC:G6099" /db_xref="EcoGene:EG13330" /db_xref="GeneID:944902" CDS complement(234027..234782) /gene="gloB" /locus_tag="b0212" /gene_synonym="ECK0212; JW0202; yafR" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_process="GO:0009438 - methylglyoxal metabolic process" /note="probable hydroxyacylglutathione hydrolase" /codon_start=1 /transl_table=11 /product="hydroxyacylglutathione hydrolase" /protein_id="NP_414748.1" /db_xref="GI:16128199" /db_xref="ASAP:ABE-0000707" /db_xref="UniProtKB/Swiss-Prot:P0AC84" /db_xref="ECOCYC:G6099" /db_xref="EcoGene:EG13330" /db_xref="GeneID:944902" /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR TEDIDLINVINEETLLQQPEERFAWLRSKKDRF" gene 234816..235538 /gene="yafS" /locus_tag="b0213" /gene_synonym="ECK0213; JW0203" /db_xref="ECOCYC:G6100" /db_xref="EcoGene:EG13331" /db_xref="GeneID:944903" CDS 234816..235538 /gene="yafS" /locus_tag="b0213" /gene_synonym="ECK0213; JW0203" /codon_start=1 /transl_table=11 /product="predicted S-adenosyl-L-methionine-dependent methyltransferase" /protein_id="NP_414749.2" /db_xref="GI:90111099" /db_xref="ASAP:ABE-0000713" /db_xref="UniProtKB/Swiss-Prot:P75672" /db_xref="ECOCYC:G6100" /db_xref="EcoGene:EG13331" /db_xref="GeneID:944903" /translation="MKPARVPQTVVAPDCWGDLPWGKLYRKALERQLNPWFTKMYGFH LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW CTDPHRLLREADRVLIDDGWLVISGFNPISFMGLRKLVPVLRKTSPYNSRMFTLMRQL DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ SKNKPRIRQAVGATRQCRKPQA" gene complement(235535..236002) /gene="rnhA" /locus_tag="b0214" /gene_synonym="cer; dasF; ECK0214; herA; JW0204; rnh; sdrA; sin" /db_xref="ECOCYC:EG10860" /db_xref="EcoGene:EG10860" /db_xref="GeneID:946955" CDS complement(235535..236002) /gene="rnhA" /locus_tag="b0214" /gene_synonym="cer; dasF; ECK0214; herA; JW0204; rnh; sdrA; sin" /EC_number="3.1.26.4" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 2171503" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication; GO:0006508 - proteolysis; GO:0006401 - RNA catabolic process" /note="RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication" /codon_start=1 /transl_table=11 /product="ribonuclease HI, degrades RNA of DNA-RNA hybrids" /protein_id="NP_414750.1" /db_xref="GI:16128201" /db_xref="ASAP:ABE-0000717" /db_xref="UniProtKB/Swiss-Prot:P0A7Y4" /db_xref="ECOCYC:EG10860" /db_xref="EcoGene:EG10860" /db_xref="GeneID:946955" /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV" gene 236067..236798 /gene="dnaQ" /locus_tag="b0215" /gene_synonym="ECK0215; JW0205; mutD" /db_xref="ECOCYC:EG10243" /db_xref="EcoGene:EG10243" /db_xref="GeneID:946441" CDS 236067..236798 /gene="dnaQ" /locus_tag="b0215" /gene_synonym="ECK0215; JW0205; mutD" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication; GO:0006457 - protein folding" /note="DNA polymerase III, epsilon subunit" /codon_start=1 /transl_table=11 /product="DNA polymerase III epsilon subunit" /protein_id="NP_414751.1" /db_xref="GI:16128202" /db_xref="ASAP:ABE-0000722" /db_xref="UniProtKB/Swiss-Prot:P03007" /db_xref="ECOCYC:EG10243" /db_xref="EcoGene:EG10243" /db_xref="GeneID:946441" /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT DEEIAAHEARLDLVQKKGGSCLWRA" gene 236931..237007 /gene="aspV" /locus_tag="b0216" /gene_synonym="ECK0216; JWR0007" /db_xref="ECOCYC:EG30025" /db_xref="EcoGene:EG30025" /db_xref="GeneID:947541" tRNA 236931..237007 /gene="aspV" /locus_tag="b0216" /gene_synonym="ECK0216; JWR0007" /product="tRNA-Asp" /note="anticodon: GUC" /db_xref="ASAP:ABE-0000724" /db_xref="ECOCYC:EG30025" /db_xref="EcoGene:EG30025" /db_xref="GeneID:947541" gene 237335..238120 /gene="yafT" /locus_tag="b0217" /gene_synonym="ECK0217; JW0206" /db_xref="ECOCYC:G6101" /db_xref="EcoGene:EG13332" /db_xref="GeneID:949009" CDS 237335..238120 /gene="yafT" /locus_tag="b0217" /gene_synonym="ECK0217; JW0206" /function="putative enzyme; Not classified" /note="putative aminopeptidase" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="NP_414752.1" /db_xref="GI:16128203" /db_xref="ASAP:ABE-0000727" /db_xref="UniProtKB/Swiss-Prot:P77339" /db_xref="ECOCYC:G6101" /db_xref="EcoGene:EG13332" /db_xref="GeneID:949009" /translation="MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTP QQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMR KYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV YQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYE YKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ" gene complement(238257..238736) /gene="ykfM" /locus_tag="b4586" /gene_synonym="ECK4397" /db_xref="ECOCYC:G0-10583" /db_xref="EcoGene:EG14451" /db_xref="GeneID:5061498" CDS complement(238257..238736) /gene="ykfM" /locus_tag="b4586" /gene_synonym="ECK4397" /codon_start=1 /transl_table=11 /product="hypothetical protein, no homologs" /protein_id="YP_001165307.1" /db_xref="GI:145698220" /db_xref="UniProtKB/Swiss-Prot:P71282" /db_xref="ECOCYC:G0-10583" /db_xref="EcoGene:EG14451" /db_xref="GeneID:5061498" /translation="MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCST EIFYDWRMLILCFGFMSFSFLNIHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLL IAIVIAPLIAPFVTGYVNTNYHPCGNNTGIFPGAIYIKNGMKCNNGYISRKEDSAVK" gene complement(238746..239102) /gene="yafU" /locus_tag="b0218" /gene_synonym="ECK0218; JW0207" /pseudo /db_xref="ECOCYC:G6102" /db_xref="EcoGene:EG13333" /db_xref="GeneID:946644" CDS complement(238746..239102) /gene="yafU" /locus_tag="b0218" /gene_synonym="ECK0218; JW0207" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000729" /db_xref="UniProtKB/Swiss-Prot:P77354" /db_xref="ECOCYC:G6102" /db_xref="EcoGene:EG13333" /db_xref="GeneID:946644" gene 239106..239378 /gene="yafF" /locus_tag="b4503" /gene_synonym="ECK0219; JW0208" /pseudo /db_xref="EcoGene:EG11772" /db_xref="GeneID:1450235" CDS 239106..239378 /gene="yafF" /locus_tag="b4503" /gene_synonym="ECK0219; JW0208" /GO_component="GO:0005737 - cytoplasm" /note="pseudogene, H repeat-associated protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285024" /db_xref="UniProtKB/Swiss-Prot:Q2EEP9" /db_xref="EcoGene:EG11772" /db_xref="GeneID:1450235" gene complement(239419..240189) /gene="yafV" /locus_tag="b0219" /gene_synonym="ECK0220; JW5019" /db_xref="ECOCYC:G6103" /db_xref="EcoGene:EG13334" /db_xref="GeneID:946585" CDS complement(239419..240189) /gene="yafV" /locus_tag="b0219" /gene_synonym="ECK0220; JW5019" /function="putative enzyme; Not classified" /note="putative EC 3.5. amidase-type enzyme" /codon_start=1 /transl_table=11 /product="predicted C-N hydrolase family amidase, NAD(P)-binding" /protein_id="NP_414754.1" /db_xref="GI:16128205" /db_xref="ASAP:ABE-0000734" /db_xref="UniProtKB/Swiss-Prot:Q47679" /db_xref="ECOCYC:G6103" /db_xref="EcoGene:EG13334" /db_xref="GeneID:946585" /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAL YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA TADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW" gene 240343..240816 /gene="ivy" /locus_tag="b0220" /gene_synonym="ECK0221; JW0210; ykfE" /db_xref="ECOCYC:G6104" /db_xref="EcoGene:EG13547" /db_xref="GeneID:946530" CDS 240343..240816 /gene="ivy" /locus_tag="b0220" /gene_synonym="ECK0221; JW0210; ykfE" /note="inhibitor of vertebrate C-type lysozyme, periplasmic" /codon_start=1 /transl_table=11 /product="inhibitor of vertebrate C-lysozyme" /protein_id="NP_414755.1" /db_xref="GI:16128206" /db_xref="ASAP:ABE-0000740" /db_xref="UniProtKB/Swiss-Prot:P0AD59" /db_xref="ECOCYC:G6104" /db_xref="EcoGene:EG13547" /db_xref="GeneID:946530" /translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK SNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK" mat_peptide 240427..240813 /gene="ivy" /locus_tag="b0220" /gene_synonym="ECK0221; JW0210; ykfE" /product="inhibitor of vertebrate C-lysozyme" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9868784,11278658" gene complement(240859..243303) /gene="fadE" /locus_tag="b0221" /gene_synonym="ECK0222; fadF; JW5020; yafH" /db_xref="ECOCYC:G6105" /db_xref="EcoGene:EG13145" /db_xref="GeneID:949007" CDS complement(240859..243303) /gene="fadE" /locus_tag="b0221" /gene_synonym="ECK0222; fadF; JW5020; yafH" /EC_number="1.3.99.3" /function="putative enzyme; Not classified" /GO_process="GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="acyl coenzyme A dehydrogenase" /protein_id="NP_414756.2" /db_xref="GI:90111100" /db_xref="ASAP:ABE-0000743" /db_xref="UniProtKB/Swiss-Prot:Q47146" /db_xref="ECOCYC:G6105" /db_xref="EcoGene:EG13145" /db_xref="GeneID:949007" /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK EHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT DEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWN KRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVP FQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI VKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMI FGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSST PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAV LKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRH YLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQ RICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRSINVDDFDPEELA TKPVKLPEKVRKVEAA" gene 243543..244121 /gene="lpcA" /locus_tag="b0222" /gene_synonym="ECK0223; gmhA; isn; JW0212; tfrA; yafI" /db_xref="ECOCYC:G6106" /db_xref="EcoGene:EG13146" /db_xref="GeneID:949134" CDS 243543..244121 /gene="lpcA" /locus_tag="b0222" /gene_synonym="ECK0223; gmhA; isn; JW0212; tfrA; yafI" /EC_number="5.-.-.-" /function="enzyme; Surface polysaccharides & antigens" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009244 - lipopolysaccharide core region biosynthetic process" /note="phosphoheptose isomerase" /codon_start=1 /transl_table=11 /product="D-sedoheptulose 7-phosphate isomerase" /protein_id="NP_414757.1" /db_xref="GI:16128208" /db_xref="ASAP:ABE-0000751" /db_xref="UniProtKB/Swiss-Prot:P63224" /db_xref="ECOCYC:G6106" /db_xref="EcoGene:EG13146" /db_xref="GeneID:949134" /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK" repeat_region 244129..244263 /note="REP17 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene 244327..245094 /gene="yafJ" /locus_tag="b0223" /gene_synonym="ECK0224; JW0213" /db_xref="ECOCYC:G6107" /db_xref="EcoGene:EG13147" /db_xref="GeneID:944906" CDS 244327..245094 /gene="yafJ" /locus_tag="b0223" /gene_synonym="ECK0224; JW0213" /function="putative enzyme; Not classified" /note="putative amidotransferase" /codon_start=1 /transl_table=11 /product="predicted amidotransfease" /protein_id="NP_414758.1" /db_xref="GI:16128209" /db_xref="ASAP:ABE-0000755" /db_xref="UniProtKB/Swiss-Prot:Q47147" /db_xref="ECOCYC:G6107" /db_xref="EcoGene:EG13147" /db_xref="GeneID:944906" /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV" gene complement(245065..245805) /gene="yafK" /locus_tag="b0224" /gene_synonym="ECK0225; JW0214" /db_xref="ECOCYC:G6108" /db_xref="EcoGene:EG13148" /db_xref="GeneID:944910" CDS complement(245065..245805) /gene="yafK" /locus_tag="b0224" /gene_synonym="ECK0225; JW0214" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414759.1" /db_xref="GI:16128210" /db_xref="ASAP:ABE-0000757" /db_xref="UniProtKB/Swiss-Prot:P0AA99" /db_xref="ECOCYC:G6108" /db_xref="EcoGene:EG13148" /db_xref="GeneID:944910" /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN GRYVVSKPLSHEVVQPQLASNYTLPEAK" gene complement(245961..246239) /gene="yafQ" /locus_tag="b0225" /gene_synonym="ECK0226; JW0215" /db_xref="ECOCYC:G6109" /db_xref="EcoGene:EG13154" /db_xref="GeneID:944911" CDS complement(245961..246239) /gene="yafQ" /locus_tag="b0225" /gene_synonym="ECK0226; JW0215" /codon_start=1 /transl_table=11 /product="translation inhibitor toxin of toxin-antitoxin pair YafQ/DinJ" /protein_id="NP_414760.1" /db_xref="GI:16128211" /db_xref="ASAP:ABE-0000761" /db_xref="UniProtKB/Swiss-Prot:Q47149" /db_xref="ECOCYC:G6109" /db_xref="EcoGene:EG13154" /db_xref="GeneID:944911" /translation="MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLP AVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG" gene complement(246242..246502) /gene="dinJ" /locus_tag="b0226" /gene_synonym="ECK0227; JW0216; sosA" /db_xref="ECOCYC:G6110" /db_xref="EcoGene:EG13142" /db_xref="GeneID:944914" CDS complement(246242..246502) /gene="dinJ" /locus_tag="b0226" /gene_synonym="ECK0227; JW0216; sosA" /function="phenotype; Not classified" /GO_process="GO:0006281 - DNA repair" /note="damage-inducible protein J" /codon_start=1 /transl_table=11 /product="antitoxin of YafQ-DinJ toxin-antitoxin system" /protein_id="NP_414761.1" /db_xref="GI:16128212" /db_xref="ASAP:ABE-0000764" /db_xref="UniProtKB/Swiss-Prot:Q47150" /db_xref="ECOCYC:G6110" /db_xref="EcoGene:EG13142" /db_xref="GeneID:944914" /translation="MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVARE KALPFDLREPNQLTIQSIKNSEAGIDVHKAKDADDLFDKLGI" gene 246712..247461 /gene="yafL" /locus_tag="b0227" /gene_synonym="ECK0228; JW0217" /db_xref="ECOCYC:G6111" /db_xref="EcoGene:EG13149" /db_xref="GeneID:944899" CDS 246712..247461 /gene="yafL" /locus_tag="b0227" /gene_synonym="ECK0228; JW0217" /function="putative membrane; Not classified" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /note="putative lipoprotein" /codon_start=1 /transl_table=11 /product="predicted lipoprotein and C40 family peptidase" /protein_id="NP_414762.1" /db_xref="GI:16128213" /db_xref="ASAP:ABE-0000775" /db_xref="UniProtKB/Swiss-Prot:Q47151" /db_xref="ECOCYC:G6111" /db_xref="EcoGene:EG13149" /db_xref="GeneID:944899" /translation="MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQN RARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQA LAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILE AKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRT GETIRISRLAEPFWQDHFLGARRILTEETIL" repeat_region 247458..247541 /note="REP18 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 247637..248134 /gene="yafM" /locus_tag="b0228" /gene_synonym="ECK0229; JW0218" /db_xref="ECOCYC:G6112" /db_xref="EcoGene:EG13150" /db_xref="GeneID:944913" CDS 247637..248134 /gene="yafM" /locus_tag="b0228" /gene_synonym="ECK0229; JW0218" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414763.1" /db_xref="GI:16128214" /db_xref="ASAP:ABE-0000779" /db_xref="UniProtKB/Swiss-Prot:Q47152" /db_xref="ECOCYC:G6112" /db_xref="EcoGene:EG13150" /db_xref="GeneID:944913" /translation="MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKR DRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHA IRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAG ERIIS" repeat_region 248147..248334 /note="REP19 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(248358..250070) /gene="lfhA" /locus_tag="b0229" /gene_synonym="ECK0230; fhiA; JW5811" /pseudo /db_xref="EcoGene:EG13144" /db_xref="GeneID:944908" CDS complement(248358..250070) /gene="lfhA" /locus_tag="b0229" /gene_synonym="ECK0230; fhiA; JW5811" /GO_component="GO:0019861 - flagellum; GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000782" /db_xref="UniProtKB/Swiss-Prot:Q47153" /db_xref="EcoGene:EG13144" /db_xref="GeneID:944908" gene 250072..250827 /gene="lafU" /locus_tag="b0230" /gene_synonym="ECK0231; JW5812; mbhA" /pseudo /db_xref="EcoGene:EG13143" /db_xref="GeneID:944921" CDS 250072..250827 /gene="lafU" /locus_tag="b0230" /gene_synonym="ECK0231; JW5812; mbhA" /GO_process="GO:0042330 - taxis" /note="pseudogene, lateral flagellar motor protein fragment" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000785" /db_xref="UniProtKB/Swiss-Prot:Q47154" /db_xref="EcoGene:EG13143" /db_xref="GeneID:944921" gene 250898..251953 /gene="dinB" /locus_tag="b0231" /gene_synonym="dinP; ECK0232; JW0221" /db_xref="ECOCYC:G6115" /db_xref="EcoGene:EG13141" /db_xref="GeneID:944922" CDS 250898..251953 /gene="dinB" /locus_tag="b0231" /gene_synonym="dinP; ECK0232; JW0221" /EC_number="2.7.7.7" /function="2.1.1 information transfer; DNA related; DNA replication" /function="5.8 cell processes; SOS response" /function="7.1 location of gene products; cytoplasm" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication; GO:0009432 - SOS response" /note="DNA polymerase IV; DNA polymerase IV, devoid of proofreading, damage-inducible protein P" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /protein_id="NP_414766.1" /db_xref="GI:16128217" /db_xref="ASAP:ABE-0000789" /db_xref="UniProtKB/Swiss-Prot:Q47155" /db_xref="ECOCYC:G6115" /db_xref="EcoGene:EG13141" /db_xref="GeneID:944922" /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA NYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSL DEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNG QFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKF GRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAK VKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGL HVTLLDPQMERQLVLGL" gene 252005..252298 /gene="yafN" /locus_tag="b0232" /gene_synonym="ECK0233; JW0222" /db_xref="ECOCYC:G6116" /db_xref="EcoGene:EG13151" /db_xref="GeneID:944920" CDS 252005..252298 /gene="yafN" /locus_tag="b0232" /gene_synonym="ECK0233; JW0222" /codon_start=1 /transl_table=11 /product="antitoxin of the YafO-YafN toxin-antitoxin system" /protein_id="NP_414767.1" /db_xref="GI:16128218" /db_xref="ASAP:ABE-0000793" /db_xref="UniProtKB/Swiss-Prot:Q47156" /db_xref="ECOCYC:G6116" /db_xref="EcoGene:EG13151" /db_xref="GeneID:944920" /translation="MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSAS AFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE" gene 252301..252699 /gene="yafO" /locus_tag="b0233" /gene_synonym="ECK0234; JW0223" /db_xref="ECOCYC:G6117" /db_xref="EcoGene:EG13152" /db_xref="GeneID:944916" CDS 252301..252699 /gene="yafO" /locus_tag="b0233" /gene_synonym="ECK0234; JW0223" /codon_start=1 /transl_table=11 /product="mRNA interferase toxin of the YafO-YafN toxin-antitoxin system" /protein_id="NP_414768.1" /db_xref="GI:16128219" /db_xref="ASAP:ABE-0000795" /db_xref="UniProtKB/Swiss-Prot:Q47157" /db_xref="ECOCYC:G6117" /db_xref="EcoGene:EG13152" /db_xref="GeneID:944916" /translation="MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALY DDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIA ILKPEPHKLARDNNQMHKIGKMAEAFRMRF" gene 252709..253161 /gene="yafP" /locus_tag="b0234" /gene_synonym="ECK0235; JW0224" /db_xref="ECOCYC:G6118" /db_xref="EcoGene:EG13153" /db_xref="GeneID:944912" CDS 252709..253161 /gene="yafP" /locus_tag="b0234" /gene_synonym="ECK0235; JW0224" /codon_start=1 /transl_table=11 /product="predicted acyltransferase with acyl-CoA N-acyltransferase domain" /protein_id="NP_414769.1" /db_xref="GI:16128220" /db_xref="ASAP:ABE-0000801" /db_xref="UniProtKB/Swiss-Prot:Q47158" /db_xref="ECOCYC:G6118" /db_xref="EcoGene:EG13153" /db_xref="GeneID:944912" /translation="MNNIQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQISAWAQI DESRWKEKLAKSQVWVAIINAQPVGFISRIEHYIDMLFVDPEYTRRGVASALLKPLIK SESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFTNFYMRYKPQH" gene 253479..253685 /gene="ykfJ" /locus_tag="b0235" /gene_synonym="ECK0236; JW0225" /pseudo /db_xref="EcoGene:EG14368" /db_xref="GeneID:944924" CDS 253479..253685 /gene="ykfJ" /locus_tag="b0235" /gene_synonym="ECK0236; JW0225" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000805" /db_xref="UniProtKB/Swiss-Prot:P75675" /db_xref="EcoGene:EG14368" /db_xref="GeneID:944924" gene 253702..254202 /gene="prfH" /locus_tag="b0236" /gene_synonym="ECK0237; JW0226" /pseudo /db_xref="EcoGene:EG11496" /db_xref="GeneID:947374" CDS 253702..254202 /gene="prfH" /locus_tag="b0236" /gene_synonym="ECK0237; JW0226" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006412 - translation" /note="pseudogene, predicted peptide chain release factor homolog; probable peptide chain release factor" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000807" /db_xref="UniProtKB/Swiss-Prot:P28369" /db_xref="EcoGene:EG11496" /db_xref="GeneID:947374" repeat_region 254217..254244 /note="REP20 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(254259..255716) /gene="pepD" /locus_tag="b0237" /gene_synonym="ECK0238; JW0227; pepH" /db_xref="ECOCYC:EG10695" /db_xref="EcoGene:EG10695" /db_xref="GeneID:945013" CDS complement(254259..255716) /gene="pepD" /locus_tag="b0237" /gene_synonym="ECK0238; JW0227; pepH" /EC_number="3.4.13.3" /function="enzyme; Degradation of proteins, peptides, glyco" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="aminoacyl-histidine dipeptidase (peptidase D)" /protein_id="NP_414772.1" /db_xref="GI:16128223" /db_xref="ASAP:ABE-0000809" /db_xref="UniProtKB/Swiss-Prot:P15288" /db_xref="ECOCYC:EG10695" /db_xref="EcoGene:EG10695" /db_xref="GeneID:945013" /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWL QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVL KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK" mat_peptide complement(254262..255713) /gene="pepD" /locus_tag="b0237" /gene_synonym="ECK0238; JW0227; pepH" /product="aminoacyl-histidine dipeptidase (peptidase D)" /experiment="N-terminus verified by Edman degradation: PMID 2651887,7988883" gene 255977..256435 /gene="gpt" /locus_tag="b0238" /gene_synonym="ECK0239; gpp; gxu; JW0228" /db_xref="ECOCYC:EG10414" /db_xref="EcoGene:EG10414" /db_xref="GeneID:944817" CDS 255977..256435 /gene="gpt" /locus_tag="b0238" /gene_synonym="ECK0239; gpp; gxu; JW0228" /EC_number="2.4.2.22" /function="enzyme; Salvage of nucleosides and nucleotides" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="guanine-hypoxanthine phosphoribosyltransferase" /protein_id="NP_414773.1" /db_xref="GI:16128224" /db_xref="ASAP:ABE-0000814" /db_xref="UniProtKB/Swiss-Prot:P0A9M5" /db_xref="ECOCYC:EG10414" /db_xref="EcoGene:EG10414" /db_xref="GeneID:944817" /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR" gene 256527..257771 /gene="frsA" /locus_tag="b0239" /gene_synonym="ECK0240; JW0229; yafA" /db_xref="ECOCYC:EG11091" /db_xref="EcoGene:EG11091" /db_xref="GeneID:946039" CDS 256527..257771 /gene="frsA" /locus_tag="b0239" /gene_synonym="ECK0240; JW0229; yafA" /codon_start=1 /transl_table=11 /product="fermentation-respiration switch protein; PTS Enzyme IIA(Glc)-binding protein; pNP-butyrate esterase activity" /protein_id="NP_414774.1" /db_xref="GI:16128225" /db_xref="ASAP:ABE-0000817" /db_xref="UniProtKB/Swiss-Prot:P04335" /db_xref="ECOCYC:EG11091" /db_xref="EcoGene:EG11091" /db_xref="GeneID:946039" /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA TQAMVWQQKACAEDDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN PVYRNFDKGLQEITDWIEKRLC" gene 257829..258230 /gene="crl" /locus_tag="b0240" /gene_synonym="ECK0241; JW0230" /db_xref="ECOCYC:EG11092" /db_xref="EcoGene:EG11092" /db_xref="GeneID:945077" CDS 257829..258230 /gene="crl" /locus_tag="b0240" /gene_synonym="ECK0241; JW0230" /function="regulator; Surface structures" /GO_component="GO:0005737 - cytoplasm; GO:0009289 - pilus" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="transcriptional regulator of cryptic csgA gene for curli surface fibers" /codon_start=1 /transl_table=11 /product="sigma factor-binding protein, stimulates RNA polymerase holoenzyme formation" /protein_id="NP_414775.1" /db_xref="GI:16128226" /db_xref="ASAP:ABE-0000821" /db_xref="UniProtKB/Swiss-Prot:P24251" /db_xref="ECOCYC:EG11092" /db_xref="EcoGene:EG11092" /db_xref="GeneID:945077" /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCKDNRFFFDCLAVCVNV KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE FHEKLRELLTTLNLKLEPADDFRDEPVKLTA" mat_peptide 257832..258227 /gene="crl" /locus_tag="b0240" /gene_synonym="ECK0241; JW0230" /product="sigma factor-binding protein, stimulates RNA polymerase holoenzyme formation" /experiment="N-terminus verified by Edman degradation: PMID 2649795" repeat_region 258240..258260 /note="REP21 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(258269..259324) /gene="phoE" /locus_tag="b0241" /gene_synonym="ECK0242; JW0231; ompE" /db_xref="ECOCYC:EG10729" /db_xref="EcoGene:EG10729" /db_xref="GeneID:944926" CDS complement(258269..259324) /gene="phoE" /locus_tag="b0241" /gene_synonym="ECK0242; JW0231; ompE" /function="membrane; Outer membrane constituents" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="outer membrane pore protein E (E,Ic,NmpAB)" /codon_start=1 /transl_table=11 /product="outer membrane phosphoporin protein E" /protein_id="NP_414776.1" /db_xref="GI:16128227" /db_xref="ASAP:ABE-0000823" /db_xref="UniProtKB/Swiss-Prot:P02932" /db_xref="ECOCYC:EG10729" /db_xref="EcoGene:EG10729" /db_xref="GeneID:944926" /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM SDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF DFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK LNINNDDIVAVGMTYQF" mat_peptide complement(258272..259261) /gene="phoE" /locus_tag="b0241" /gene_synonym="ECK0242; JW0231; ompE" /product="outer membrane phosphoporin protein E" /experiment="N-terminus verified by Edman degradation: PMID 337109" gene 259612..260715 /gene="proB" /locus_tag="b0242" /gene_synonym="ECK0243; JW0232; pro" /db_xref="ECOCYC:EG10768" /db_xref="EcoGene:EG10768" /db_xref="GeneID:946425" CDS 259612..260715 /gene="proB" /locus_tag="b0242" /gene_synonym="ECK0243; JW0232; pro" /EC_number="2.7.2.11" /function="enzyme; Amino acid biosynthesis: Proline" /experiment="N-terminus verified by Edman degradation: PMID 6089111" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006561 - proline biosynthetic process" /codon_start=1 /transl_table=11 /product="gamma-glutamate kinase" /protein_id="NP_414777.1" /db_xref="GI:16128228" /db_xref="ASAP:ABE-0000830" /db_xref="UniProtKB/Swiss-Prot:P0A7B5" /db_xref="ECOCYC:EG10768" /db_xref="EcoGene:EG10768" /db_xref="GeneID:946425" /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR" gene 260727..261980 /gene="proA" /locus_tag="b0243" /gene_synonym="ECK0244; JW0233; pro" /db_xref="ECOCYC:EG10767" /db_xref="EcoGene:EG10767" /db_xref="GeneID:946680" CDS 260727..261980 /gene="proA" /locus_tag="b0243" /gene_synonym="ECK0244; JW0233; pro" /EC_number="1.2.1.41" /function="enzyme; Amino acid biosynthesis: Proline" /experiment="N-terminus verified by Edman degradation: PMID 6089111" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006561 - proline biosynthetic process" /codon_start=1 /transl_table=11 /product="gamma-glutamylphosphate reductase" /protein_id="NP_414778.1" /db_xref="GI:16128229" /db_xref="ASAP:ABE-0000832" /db_xref="UniProtKB/Swiss-Prot:P07004" /db_xref="ECOCYC:EG10767" /db_xref="EcoGene:EG10767" /db_xref="GeneID:946680" /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR EHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH ARGPMGLEALTTYKWIGIGDYTIRA" gene 262095..262170 /gene="thrW" /locus_tag="b0244" /gene_synonym="ECK0245; JWR0008" /db_xref="ECOCYC:EG30104" /db_xref="EcoGene:EG30104" /db_xref="GeneID:947202" tRNA 262095..262170 /gene="thrW" /locus_tag="b0244" /gene_synonym="ECK0245; JWR0008" /product="tRNA-Thr" /note="anticodon: CGU" /db_xref="ASAP:ABE-0000834" /db_xref="ECOCYC:EG30104" /db_xref="EcoGene:EG30104" /db_xref="GeneID:947202" misc_feature 262182..296489 /note="cryptic prophage CP4-6" gene complement(262374..262436) /gene="ykfN" /locus_tag="b4626" /gene_synonym="ECK4458" /pseudo /db_xref="EcoGene:EG14454" /db_xref="GeneID:5625552" CDS complement(262374..262436) /gene="ykfN" /locus_tag="b4626" /gene_synonym="ECK4458" /note="pseudogene, YdiA family" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14454" /db_xref="GeneID:5625552" gene complement(262552..262893) /gene="ykfI" /locus_tag="b0245" /gene_synonym="ECK0246; JW0234" /db_xref="ECOCYC:G6120" /db_xref="EcoGene:EG14333" /db_xref="GeneID:946726" CDS complement(262552..262893) /gene="ykfI" /locus_tag="b0245" /gene_synonym="ECK0246; JW0234" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system" /protein_id="NP_414779.1" /db_xref="GI:16128230" /db_xref="ASAP:ABE-0000836" /db_xref="UniProtKB/Swiss-Prot:P77692" /db_xref="ECOCYC:G6120" /db_xref="EcoGene:EG14333" /db_xref="GeneID:946726" /translation="MKTLPAITQRAVKPCLSPVAVWQMLLTRLLEQHYGLTINDTPFC NEAVIKEHIDAGITLADAVNFLVEKYELVRIDRKGFSWQEQSPYLRAADILRARQATG LLRQSRNNVVR" gene complement(262914..263231) /gene="yafW" /locus_tag="b0246" /gene_synonym="ECK0247; JW0235" /db_xref="ECOCYC:G6121" /db_xref="EcoGene:EG13335" /db_xref="GeneID:944929" CDS complement(262914..263231) /gene="yafW" /locus_tag="b0246" /gene_synonym="ECK0247; JW0235" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system" /protein_id="NP_414780.1" /db_xref="GI:16128231" /db_xref="ASAP:ABE-0000838" /db_xref="UniProtKB/Swiss-Prot:Q47684" /db_xref="ECOCYC:G6121" /db_xref="EcoGene:EG13335" /db_xref="GeneID:944929" /translation="MSNPTRGLQREITLRLGARLVQEGNRLHYLADRASITGKFSDIE CRKLDETFPHFILQMESMLTTGELSPHHAHCVTLYHNDLTCEADTLGSCGYVYIAIYP TQR" gene complement(263250..263471) /gene="ykfH" /locus_tag="b4504" /gene_synonym="ECK0248; JW5956" /db_xref="ECOCYC:G0-10432" /db_xref="EcoGene:EG14332" /db_xref="GeneID:1450236" CDS complement(263250..263471) /gene="ykfH" /locus_tag="b4504" /gene_synonym="ECK0248; JW5956" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="YP_588435.1" /db_xref="GI:94541094" /db_xref="ASAP:ABE-0285025" /db_xref="UniProtKB/Swiss-Prot:Q9XB42" /db_xref="ECOCYC:G0-10432" /db_xref="EcoGene:EG14332" /db_xref="GeneID:1450236" /translation="MKIISKRRAMTIYRQHPESRIFRYCTGKYQWHGSVCHYTGRDVP DIAGVLAVYAERRQDRNGPYTCLMSITLN" gene complement(263480..263956) /gene="ykfG" /locus_tag="b0247" /gene_synonym="ECK0249; JW0236" /db_xref="ECOCYC:G6122" /db_xref="EcoGene:EG14331" /db_xref="GeneID:944930" CDS complement(263480..263956) /gene="ykfG" /locus_tag="b0247" /gene_synonym="ECK0249; JW0236" /function="Phage or Prophage Related" /note="putative DNA repair protein" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted DNA repair protein" /protein_id="NP_414781.1" /db_xref="GI:16128232" /db_xref="ASAP:ABE-0000841" /db_xref="UniProtKB/Swiss-Prot:Q47685" /db_xref="ECOCYC:G6122" /db_xref="EcoGene:EG14331" /db_xref="GeneID:944930" /translation="MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVR EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL" gene complement(263972..264430) /gene="yafX" /locus_tag="b0248" /gene_synonym="ECK0250; JW5022" /db_xref="ECOCYC:G6123" /db_xref="EcoGene:EG13336" /db_xref="GeneID:944931" CDS complement(263972..264430) /gene="yafX" /locus_tag="b0248" /gene_synonym="ECK0250; JW5022" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted protein" /protein_id="NP_414782.1" /db_xref="GI:16128233" /db_xref="ASAP:ABE-0000843" /db_xref="UniProtKB/Swiss-Prot:P75676" /db_xref="ECOCYC:G6123" /db_xref="EcoGene:EG13336" /db_xref="GeneID:944931" /translation="MTTQTQHDLAPANQPEFELTVTPVPDEQRIDFWPQYFGAIPQWL LLEPHIFAWMDRFCEGYSGGIWSFYTLSNGGAFMSPEPDNDETWRLFNCLNGNDAQMS AEAAGIAVCLIAYSHHACRTECDAMTAHYYRLREYAMQHPEAHAILRIID" gene complement(264528..264767) /gene="ykfF" /locus_tag="b0249" /gene_synonym="ECK0251; JW5023" /db_xref="ECOCYC:G6124" /db_xref="EcoGene:EG14283" /db_xref="GeneID:948839" CDS complement(264528..264767) /gene="ykfF" /locus_tag="b0249" /gene_synonym="ECK0251; JW5023" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted protein" /protein_id="NP_414783.1" /db_xref="GI:16128234" /db_xref="ASAP:ABE-0000846" /db_xref="UniProtKB/Swiss-Prot:P75677" /db_xref="ECOCYC:G6124" /db_xref="EcoGene:EG14283" /db_xref="GeneID:948839" /translation="MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDT EGRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATR" gene complement(264844..265311) /gene="ykfB" /locus_tag="b0250" /gene_synonym="ECK0252; JW0239" /db_xref="ECOCYC:G6125" /db_xref="EcoGene:EG13548" /db_xref="GeneID:946846" CDS complement(264844..265311) /gene="ykfB" /locus_tag="b0250" /gene_synonym="ECK0252; JW0239" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted protein" /protein_id="NP_414784.1" /db_xref="GI:16128235" /db_xref="ASAP:ABE-0000851" /db_xref="UniProtKB/Swiss-Prot:P77162" /db_xref="ECOCYC:G6125" /db_xref="EcoGene:EG13548" /db_xref="GeneID:946846" /translation="MTILSLSRFMLAGVLLASFNASAIPGFWQQGYGQGNTEYSVTEA SGKTFTINCTGNPDQNGFYQHSVFLTLADDKMVSSHDDDTTITVVMDHQQYIIPSSLG WRNGDNAWFDFISNISEAGQFDVYVNDHKAGTFTADRKNAEKVLSTLGDCSND" gene complement(265334..265777) /gene="yafY" /locus_tag="b0251" /gene_synonym="ECK0253; JW0240" /db_xref="ECOCYC:G6126" /db_xref="EcoGene:EG13337" /db_xref="GeneID:944934" CDS complement(265334..265777) /gene="yafY" /locus_tag="b0251" /gene_synonym="ECK0253; JW0240" /function="Phage or Prophage Related" /note="hypothetical transcriptional regulator" /codon_start=1 /transl_table=11 /product="lipoprotein, inner membrane; overproduction stimulates degP expression; CP4-6 prophage" /protein_id="NP_414785.4" /db_xref="GI:145698221" /db_xref="ASAP:ABE-0000853" /db_xref="UniProtKB/Swiss-Prot:P77365" /db_xref="ECOCYC:G6126" /db_xref="EcoGene:EG13337" /db_xref="GeneID:944934" /translation="MKRKTLPLLALVATTLFLIACDDRSDDLKAISKFKDLTPPRFSD VVSHQDDVSEEWSQVDYLSGPTLQVLRTRQSPDGCEDGSYYYLVDMQEKTVQPLMNAL CIADNIKLEYQEVTDPYTKEKYFEYAHDGKLMGQLLIPSNPDNQE" gene complement(265777..265998) /gene="ykfL" /locus_tag="b4627" /gene_synonym="ECK4445" /pseudo /db_xref="EcoGene:EG14378" /db_xref="GeneID:5625553" CDS complement(265777..265998) /gene="ykfL" /locus_tag="b4627" /gene_synonym="ECK4445" /note="pseudogene, CP4-6 putative prophage remnant;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14378" /db_xref="GeneID:5625553" gene complement(266000..266191) /gene="ykfK" /locus_tag="b4628" /gene_synonym="ECK4444; yafY" /pseudo /db_xref="EcoGene:EG14377" /db_xref="GeneID:5625554" CDS complement(266000..266191) /gene="ykfK" /locus_tag="b4628" /gene_synonym="ECK4444; yafY" /note="CP4-6 prophage; predicted DNA-binding transcriptional regulator;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14377" /db_xref="GeneID:5625554" gene complement(266408..267229) /gene="yafZ" /locus_tag="b0252" /gene_synonym="ECK0254; JW0242" /db_xref="ECOCYC:G6127" /db_xref="EcoGene:EG13338" /db_xref="GeneID:945373" CDS complement(266408..267229) /gene="yafZ" /locus_tag="b0252" /gene_synonym="ECK0254; JW0242" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; conserved protein" /protein_id="NP_414786.4" /db_xref="GI:90111102" /db_xref="ASAP:ABE-0000856" /db_xref="UniProtKB/Swiss-Prot:P77206" /db_xref="ECOCYC:G6127" /db_xref="EcoGene:EG13338" /db_xref="GeneID:945373" /translation="MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSER YTYIPTISLLDSLQREGFQPFFACQTRVRDPGRREHTKHMLRLRREGQITGKQVPEII LLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIF DRVEEKRDAMQSLLLPPPAQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLW TTYQRIQENLIKGGLSGRNAKGGRSHTRAVRGIDGDVKLNRALWVMAEALLTQLQ" gene complement(267321..268184) /gene="ykfA" /locus_tag="b0253" /gene_synonym="ECK0255; JW0243" /db_xref="ECOCYC:G6128" /db_xref="EcoGene:EG13339" /db_xref="GeneID:949004" CDS complement(267321..268184) /gene="ykfA" /locus_tag="b0253" /gene_synonym="ECK0255; JW0243" /function="Phage or Prophage Related" /note="putative GTP-binding protein" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted GTP-binding protein" /protein_id="NP_414787.4" /db_xref="GI:90111103" /db_xref="ASAP:ABE-0000858" /db_xref="UniProtKB/Swiss-Prot:P75678" /db_xref="ECOCYC:G6128" /db_xref="EcoGene:EG13339" /db_xref="GeneID:949004" /translation="MNNSEGLKSFQQSLADLPQWVSERLLQQINQLTNYEPVIGIMGK TGVGKSSLCNALFAGDISPVSDVAACTREPLRFRLQVGDRYITLMDLPGVGESGARDT EYAALYREQLPRLDLVLWLIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSDKAEP TSGGGQLSTAQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCLPREA TSPVVSQLHPSFRTTVVREQARSDFGETVGAVLDSISAFPLIPAPVRAVIQAVRTTVV SVARAVWDFFF" gene complement(268513..269406) /gene="perR" /locus_tag="b0254" /gene_synonym="ECK0256; JW0244" /db_xref="ECOCYC:G6129" /db_xref="EcoGene:EG13340" /db_xref="GeneID:945417" CDS complement(268513..269406) /gene="perR" /locus_tag="b0254" /gene_synonym="ECK0256; JW0244" /function="Phage or Prophage Related" /note="peroxide resistance protein" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted DNA-binding transcriptional regulator" /protein_id="NP_414788.1" /db_xref="GI:16128239" /db_xref="ASAP:ABE-0000862" /db_xref="UniProtKB/Swiss-Prot:Q57083" /db_xref="ECOCYC:G6129" /db_xref="EcoGene:EG13340" /db_xref="GeneID:945417" /translation="MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRK LENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAP SFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPL AVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFD RSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHM HSALDVFKTWLLNELNLGKIR" repeat_region 269430..269764 /mobile_element="insertion sequence:IS911A" gene join(269502..269759,270988..271413) /gene="insN" /locus_tag="b4587" /old_locus_tag="b0255" /old_locus_tag="b0257" /gene_synonym="ECK0257; insO; ORFAB" /pseudo /db_xref="EcoGene:EG40014" /db_xref="GeneID:5061501" CDS join(269502..269759,270988..271413) /gene="insN" /locus_tag="b4587" /old_locus_tag="b0255" /old_locus_tag="b0257" /gene_synonym="ECK0257; insO; ORFAB" /experiment="N-terminus verified by Edman degradation: PMID 1660923" /note="pseudogene, IS911 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000867" /db_xref="ASAP:ABE-0000880" /db_xref="UniProtKB/Swiss-Prot:P75679" /db_xref="EcoGene:EG40014" /db_xref="GeneID:5061501" repeat_region 269765..270985 /mobile_element="insertion sequence:IS30A" gene 269827..270978 /gene="insI" /locus_tag="b0256" /gene_synonym="ECK0258" /db_xref="ECOCYC:G6131" /db_xref="EcoGene:EG40009" /db_xref="GeneID:949005" CDS 269827..270978 /gene="insI" /locus_tag="b0256" /gene_synonym="ECK0258" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS30 transposase" /protein_id="NP_414790.1" /db_xref="GI:16128241" /db_xref="ASAP:ABE-0000871" /db_xref="ECOCYC:G6131" /db_xref="EcoGene:EG40009" /db_xref="GeneID:949005" /translation="MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDT GGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRR YYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQK TLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPI HERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIIVRLRGKDSVSVNQALT DKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIR QYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD" repeat_region 270986..271414 /mobile_element="insertion sequence:IS911A" gene 271804..271878 /gene="eyeA" /locus_tag="b4690" /gene_synonym="ECK4506; I001" /db_xref="EcoGene:EG31183" /db_xref="GeneID:7751631" ncRNA 271804..271878 /gene="eyeA" /locus_tag="b4690" /gene_synonym="ECK4506; I001" /ncRNA_class="other" /product="novel sRNA, function unknown, CP4-6 propahge" /db_xref="EcoGene:EG31183" /db_xref="GeneID:7751631" gene 272071..273178 /gene="ykfC" /locus_tag="b0258" /gene_synonym="ECK0260; JW5813" /pseudo /db_xref="ECOCYC:G6133" /db_xref="EcoGene:EG13341" /db_xref="GeneID:944940" CDS 272071..273178 /gene="ykfC" /locus_tag="b0258" /gene_synonym="ECK0260; JW5813" /note="CP4-6 prophage; conserved protein;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000885" /db_xref="UniProtKB/Swiss-Prot:Q47688" /db_xref="ECOCYC:G6133" /db_xref="EcoGene:EG13341" /db_xref="GeneID:944940" repeat_region complement(273179..274373) /mobile_element="insertion sequence:IS5A" gene complement(273325..274341) /gene="insH" /locus_tag="b0259" /gene_synonym="ECK0261" /db_xref="ECOCYC:G6134" /db_xref="EcoGene:EG40008" /db_xref="GeneID:944941" CDS complement(273325..274341) /gene="insH" /locus_tag="b0259" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="NP_414793.1" /db_xref="GI:16128244" /db_xref="ASAP:ABE-0000888" /db_xref="ECOCYC:G6134" /db_xref="EcoGene:EG40008" /db_xref="GeneID:944941" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene 274549..275952 /gene="mmuP" /locus_tag="b0260" /gene_synonym="ECK0262; JW5027; ykfD" /db_xref="ECOCYC:G6135" /db_xref="EcoGene:EG13342" /db_xref="GeneID:946284" CDS 274549..275952 /gene="mmuP" /locus_tag="b0260" /gene_synonym="ECK0262; JW5027; ykfD" /function="Phage or Prophage Related" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009086 - methionine biosynthetic process" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted S-methylmethionine transporter" /protein_id="NP_414794.4" /db_xref="GI:90111105" /db_xref="ASAP:ABE-0000893" /db_xref="UniProtKB/Swiss-Prot:Q47689" /db_xref="ECOCYC:G6135" /db_xref="EcoGene:EG13342" /db_xref="GeneID:946284" /translation="MQTTQQNAPLKRTMKTRHLIMLSLGGVIGTGLFFNTGYIISTTG AAGTLLAYLIGALVVWLVMQCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLT WTVALGSSFTAAGFCMQYWFPQVPVWVWCVVFCAIIFGLNVISTRFFAEGEFWFSLVK VVTIIAFIILGGAAIFGFIPMQDGSPAPGLSNITAEGWFPHGGLPILMTMVAVNFAFS GTELIGIAAGETENPRKVIPVAIRTTIARLIIFFIGTVFVLAALIPMQQVGVEKSPFV LVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNERTLPACFARVTKNG VPLTALSVSMLGGVLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFVFRRRHL QQGKALSELHYRAPWYPLVPVLGFVLCLVACVGLAFDPAQRIALWCGLPFVALCYGAY FLTQPRNAKQEPEHVAE" gene 275939..276871 /gene="mmuM" /locus_tag="b0261" /gene_synonym="ECK0263; JW0253; yagD" /db_xref="ECOCYC:G6136" /db_xref="EcoGene:EG13343" /db_xref="GeneID:946143" CDS 275939..276871 /gene="mmuM" /locus_tag="b0261" /gene_synonym="ECK0263; JW0253; yagD" /EC_number="2.1.1.10" /function="Phage or Prophage Related" /GO_process="GO:0006071 - glycerol metabolic process; GO:0009086 - methionine biosynthetic process" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase" /protein_id="NP_414795.1" /db_xref="GI:16128246" /db_xref="ASAP:ABE-0000895" /db_xref="UniProtKB/Swiss-Prot:Q47690" /db_xref="ECOCYC:G6136" /db_xref="EcoGene:EG13343" /db_xref="GeneID:946143" /translation="MSQNNPLRALLDKQDILLLDGAMATELEARGCNLADSLWSAKVL VENPELIREVHLDYYRAGAQCAITASYQATPAGFAARGLDEAQSKALIGKSVELARKA REAYLAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYHCSVEAFQAFHRPRVEALLDA GADLLACETLPNFSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVALLAG YPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQ LADYLPQWQAAGARLIGGCCRTTPADIAALKARS" repeat_region 276899..276965 /note="REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(276980..278026) /gene="afuC" /locus_tag="b0262" /gene_synonym="ECK0264; fbpC; JW0254; yagC" /db_xref="ECOCYC:EG12340" /db_xref="EcoGene:EG12340" /db_xref="GeneID:947676" CDS complement(276980..278026) /gene="afuC" /locus_tag="b0262" /gene_synonym="ECK0264; fbpC; JW0254; yagC" /function="putative transport; Not classified; Phage or Prophage Related" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted ferric transporter subunit" /protein_id="NP_414796.2" /db_xref="GI:90111106" /db_xref="ASAP:ABE-0000898" /db_xref="UniProtKB/Swiss-Prot:P37009" /db_xref="ECOCYC:EG12340" /db_xref="EcoGene:EG12340" /db_xref="GeneID:947676" /translation="MTQKNFVELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCG KTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYG LKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLF DEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQI GSPQDLYRQPASRFMASFMGDANLFPATFSDGYVDIYGYHLPRPLHFGTQGEGMVGVR PEAITLSDRGEESQRCVIRHVAYMGPQYEVTVEWHGQEILLQVNATRLQPDVGEQYYL EIHPYGMFVLADAA" gene complement(278038..278385) /gene="afuB" /locus_tag="b0263" /gene_synonym="ECK0265; fbpB; JW0255" /pseudo /db_xref="ECOCYC:G6137" /db_xref="EcoGene:EG14277" /db_xref="GeneID:947073" CDS complement(278038..278385) /gene="afuB" /locus_tag="b0263" /gene_synonym="ECK0265; fbpB; JW0255" /note="pseudogene, CP4-6 prophage; predicted ferric transporter subunit;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000900" /db_xref="UniProtKB/Swiss-Prot:P75681" /db_xref="ECOCYC:G6137" /db_xref="EcoGene:EG14277" /db_xref="GeneID:947073" repeat_region complement(278387..279154) /mobile_element="insertion sequence:IS1B" gene complement(278402..278905) /gene="insB" /locus_tag="b0264" /gene_synonym="ECK0022" /db_xref="ECOCYC:G6138" /db_xref="EcoGene:EG40002" /db_xref="GeneID:947698" CDS complement(278402..278905) /gene="insB" /locus_tag="b0264" /gene_synonym="ECK0022" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 transposase B" /protein_id="NP_414798.1" /db_xref="GI:16128249" /db_xref="ASAP:ABE-0000906" /db_xref="ECOCYC:G6138" /db_xref="EcoGene:EG40002" /db_xref="GeneID:947698" /translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHY LNIKHYQ" gene complement(278824..279099) /gene="insA" /locus_tag="b0265" /gene_synonym="ECK0023" /db_xref="ECOCYC:G6139" /db_xref="EcoGene:EG40001" /db_xref="GeneID:944946" CDS complement(278824..279099) /gene="insA" /locus_tag="b0265" /gene_synonym="ECK0023" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 repressor TnpA" /protein_id="NP_414799.1" /db_xref="GI:16128250" /db_xref="ASAP:ABE-0000909" /db_xref="ECOCYC:G6139" /db_xref="EcoGene:EG40001" /db_xref="GeneID:944946" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" repeat_region 279155..279335 /mobile_element="insertion sequence:IS30B" repeat_region complement(279338..279649) /mobile_element="insertion sequence:ISX" gene complement(279338..279586) /gene="insX" /locus_tag="b4505" /gene_synonym="ECK4473; ykgN" /pseudo /db_xref="ECOCYC:G0-10433" /db_xref="EcoGene:EG14418" /db_xref="GeneID:1450237" CDS complement(279338..279586) /gene="insX" /locus_tag="b4505" /gene_synonym="ECK4473; ykgN" /note="pseudogene, predicted IS3 family transposase" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285026" /db_xref="ECOCYC:G0-10433" /db_xref="EcoGene:EG14418" /db_xref="GeneID:1450237" gene complement(279651..279959) /gene="yagB" /locus_tag="b0266" /gene_synonym="ECK0267; JW0259" /pseudo /db_xref="ECOCYC:EG12339" /db_xref="EcoGene:EG12339" /db_xref="GeneID:944944" CDS complement(279651..279959) /gene="yagB" /locus_tag="b0266" /gene_synonym="ECK0267; JW0259" /note="pseudogene, CP4-6 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000912" /db_xref="UniProtKB/Swiss-Prot:P37008" /db_xref="ECOCYC:EG12339" /db_xref="EcoGene:EG12339" /db_xref="GeneID:944944" gene complement(280053..281207) /gene="yagA" /locus_tag="b0267" /gene_synonym="ECK0268; JW0260" /db_xref="ECOCYC:EG12338" /db_xref="EcoGene:EG12338" /db_xref="GeneID:944937" CDS complement(280053..281207) /gene="yagA" /locus_tag="b0267" /gene_synonym="ECK0268; JW0260" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted DNA-binding transcriptional regulator" /protein_id="NP_414801.1" /db_xref="GI:16128252" /db_xref="ASAP:ABE-0000915" /db_xref="UniProtKB/Swiss-Prot:P37007" /db_xref="ECOCYC:EG12338" /db_xref="EcoGene:EG12338" /db_xref="GeneID:944937" /translation="MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATG YKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLED QGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRC HPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGT WTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDH WRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKG VSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC" gene 281481..282410 /gene="yagE" /locus_tag="b0268" /gene_synonym="ECK0269; JW0261" /db_xref="ECOCYC:G6140" /db_xref="EcoGene:EG13344" /db_xref="GeneID:944925" CDS 281481..282410 /gene="yagE" /locus_tag="b0268" /gene_synonym="ECK0269; JW0261" /function="Phage or Prophage Related" /note="putative lyase/synthase" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted lyase/synthase" /protein_id="NP_414802.1" /db_xref="GI:16128253" /db_xref="ASAP:ABE-0000921" /db_xref="UniProtKB/Swiss-Prot:P75682" /db_xref="ECOCYC:G6140" /db_xref="EcoGene:EG13344" /db_xref="GeneID:944925" /translation="MIQQGDLMPQSALFTGIIPPVSTIFTADGQLDKPGTAALIDDLI KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQ HAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALV KTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGA ISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQIPQMYQLDTPFVNVIKEAIVLC GRPVSTHVLPPASPLDEPRKAQLKTLLQQLKLC" gene 282425..284392 /gene="yagF" /locus_tag="b0269" /gene_synonym="ECK0270; JW0262" /db_xref="ECOCYC:G6141" /db_xref="EcoGene:EG13345" /db_xref="GeneID:944928" CDS 282425..284392 /gene="yagF" /locus_tag="b0269" /gene_synonym="ECK0270; JW0262" /function="Phage or Prophage Related" /note="putative dehydratase" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted dehydratase" /protein_id="NP_414803.1" /db_xref="GI:16128254" /db_xref="ASAP:ABE-0000923" /db_xref="UniProtKB/Swiss-Prot:P77596" /db_xref="ECOCYC:G6141" /db_xref="EcoGene:EG13345" /db_xref="GeneID:944928" /translation="MTIEKIFTPQDDAFYAVITHAAGPQGALPLTPQMLMESPSGNLF GMTQNAGMGWDANKLTGKEVLIIGTQGGIRAGDGRPIALGYHTGHWEIGMQMQAAAKE ITRNGGIPFAAFVSDPCDGRSQGTHGMFDSLPYRNDAAIVFRRLIRSLPTRRAVIGVA TCDKGLPATMIALAAMHDLPTILVPGGATLPPTVGEDAGKVQTIGARFANHELSLQEA AELGCRACASPGGGCQFLGTAGTSQVVAEALGLALPHSALAPSGQAVWLEIARQSARA VSELDSRGITTRDILSDKAIENAMVIHAAFGGSTNLLLHIPAIAHAAGCTIPDVEHWT RINRKVPRLVSVLPNGPDYHPTVRAFLAGGVPEVMLHLRDLGLLHLDAMTVTGQTVGE NLEWWQASERRARFRQCLREQDGVEPDDVILPPEKAKAKGLTSTVCFPTGNIAPEGSV IKATAIDPSVVGEDGVYHHTGRVRVFVSEAQAIKAIKREEIVQGDIMVVIGGGPSGTG MEETYQLTSALKHISWGKTVSLITDARFSGVSTGACFGHVSPEALAGGPIGKLRDNDI IEIAVDRLTLTGSVNFIGTADNPLTPEEGARELARRQTHPDLHAHDFLPDDTRLWAAL QSVSGGTWKGCIYDTDKIIEVINAGKKALGI" gene 284619..286001 /gene="yagG" /locus_tag="b0270" /gene_synonym="ECK0271; JW0263" /db_xref="ECOCYC:G6142" /db_xref="EcoGene:EG13346" /db_xref="GeneID:944947" CDS 284619..286001 /gene="yagG" /locus_tag="b0270" /gene_synonym="ECK0271; JW0263" /function="Phage or Prophage Related" /note="putative permease" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted sugar transporter" /protein_id="NP_414804.1" /db_xref="GI:16128255" /db_xref="ASAP:ABE-0000929" /db_xref="UniProtKB/Swiss-Prot:P75683" /db_xref="ECOCYC:G6142" /db_xref="EcoGene:EG13346" /db_xref="GeneID:944947" /translation="MTQLTMKDKIGYGLGDTACGFVWQATMFLLAYFYTDVFGLSAGI MGTLFLVSRVLDAVTDPLMGLLVDRTRTRHGQFRPFLLWGAIPFGIVCVLTFYTPDFS AQGKIIYACVTYILLTLVYTFVNVPYCAMPGVITADPKERHALQSWRFFLAAAGSLAI SGIALPLVSIIGKGDEQVGYFGAMCVLGLSGVVLLYVCFFTTKERYTFEVQPGSSVAK DLKLLLGNSQWRIMCAFKMMATCSNVVRGGATLYFVKYVMDHPELATQFLLYGSLATM FGSLCSSRLLGRFDRVTAFKWIIVAYSLISLLIFVTPAEHIALIFALNILFLFVFNTT TPLQWLMASDVVDYEESRSGRRLDGLVFSTYLFSLKIGLAIGGAVVGWILAYVNYSAS SSVQPVEVLTTIKILFCVVPVVLYAGMFIMLSLYKLTDARVEAISRQLIKHRAAQGEA VPDAATAASH" gene 286013..287623 /gene="yagH" /locus_tag="b0271" /gene_synonym="ECK0272; JW0264" /db_xref="ECOCYC:G6143" /db_xref="EcoGene:EG13347" /db_xref="GeneID:944949" CDS 286013..287623 /gene="yagH" /locus_tag="b0271" /gene_synonym="ECK0272; JW0264" /function="Phage or Prophage Related" /note="putative beta-xylosidase" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted xylosidase/arabinosidase" /protein_id="NP_414805.1" /db_xref="GI:16128256" /db_xref="ASAP:ABE-0000931" /db_xref="UniProtKB/Swiss-Prot:P77713" /db_xref="ECOCYC:G6143" /db_xref="EcoGene:EG13347" /db_xref="GeneID:944949" /translation="MEITNPILTGFNPDPSLCRQGEDYYIATSTFEWFPGVRIYHSRD LKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYADGKFWLLYTDVKIVDSPWKNGR NFLVTAPSIEGPWSEPIPMGNGGFDPSLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQ AFDPQTGTLSPERKTLFTGTPLCYTEGAHLYRHAGWYYLMAAEGGTSYEHAVVVLRSK NIDGPYELHPDVTMMTSWHLPENPLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGVPL LASGGRGYCPLGRETGIARIEWRDGWPYVEGGKHAQLTVKGPQVAEQPAAVPGNWRDD FDASSLDPELQTLRIPFDDTLGSLTARPGFLRLYGNDSLNSTFTQSTVARRWQHFAFR AETRMEFSPVHFQQSAGLTCYYNSKNWSYCFVDYEEGQGRTIKVIQLDHNVPSWPLHE QPIPVPEHAESVWLRVDVDTLVYRYSYSFDGETWHTVPVTYEAWKLSDDYIGGRGFFT GAFVGLHCEDISGDGCYADFDYFTYEPV" gene complement(287628..288386) /gene="yagI" /locus_tag="b0272" /gene_synonym="ECK0273; JW0265" /db_xref="ECOCYC:G6144" /db_xref="EcoGene:EG13349" /db_xref="GeneID:945016" CDS complement(287628..288386) /gene="yagI" /locus_tag="b0272" /gene_synonym="ECK0273; JW0265" /function="Phage or Prophage Related" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative regulator" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted DNA-binding transcriptional regulator" /protein_id="NP_414806.1" /db_xref="GI:16128257" /db_xref="ASAP:ABE-0000933" /db_xref="UniProtKB/Swiss-Prot:P77300" /db_xref="ECOCYC:G6144" /db_xref="EcoGene:EG13349" /db_xref="GeneID:945016" /translation="MPIIQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLL KTLQLHGYIDQNPENGKYRLGMKLVERGHFVVGSIDIRQKAKGWLTELSRRTGQTTHL GILDGREGVYIEKIEGKLAAIAYSRIGRRLPVHATAIGKVLIAWLGEAELNALLEGYQ YTTFTPATLASREALMSALAQTREQGYALDSEENEQGVRCVAVPVWNHESRVIAALSL STLTSRVDDAELANFREQLQQAGLALSRALGYPA" gene complement(288525..289529) /gene="argF" /locus_tag="b0273" /gene_synonym="Arg5; argD; ECK0274; JW0266" /db_xref="ECOCYC:EG10067" /db_xref="EcoGene:EG10067" /db_xref="GeneID:944844" CDS complement(288525..289529) /gene="argF" /locus_tag="b0273" /gene_synonym="Arg5; argD; ECK0274; JW0266" /EC_number="2.1.3.3" /function="enzyme; Amino acid biosynthesis: Arginine; Phage or Prophage Related" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006526 - arginine biosynthetic process" /note="ornithine carbamoyltransferase 2, chain F" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase 2, chain F; CP4-6 prophage" /protein_id="NP_414807.1" /db_xref="GI:16128258" /db_xref="ASAP:ABE-0000939" /db_xref="UniProtKB/Swiss-Prot:P06960" /db_xref="ECOCYC:EG10067" /db_xref="EcoGene:EG10067" /db_xref="GeneID:944844" /translation="MSDLYKKHFLKLLDFTPAQFTSLLTLAAQLKADKKNGKEVQKLT GKNIALIFEKDSTRTRCSFEVAAFDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD GIQYRGHGQEVVETLAQYAGVPVWNGLTNEFHPTQLLADLMTMQEHLPGKAFNEMTLV YAGDARNNMGNSMLEAAALTGLDLRLLAPKACWPEESLVAECSALAEKHGGKITLTED VAAGVKGADFIYTDVWVSMGEAKEKWAERIALLRGYQVNAQMMALTDNPNVKFLHCLP AFHDDQTTLGKQMAKEFDLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMMATLGE" mat_peptide complement(288528..289526) /gene="argF" /locus_tag="b0273" /gene_synonym="Arg5; argD; ECK0274; JW0266" /product="ornithine carbamoyltransferase 2, chain F; CP4-6 prophage" /experiment="N-terminus verified by Edman degradation: PMID 3968036" gene 289653..289857 /gene="ykgS" /locus_tag="b4688" /gene_synonym="ECK4504" /pseudo /db_xref="EcoGene:EG14492" /db_xref="GeneID:7751632" CDS 289653..289857 /gene="ykgS" /locus_tag="b4688" /gene_synonym="ECK4504" /note="pseudogene fragment" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14492" /db_xref="GeneID:7751632" repeat_region complement(289858..290625) /mobile_element="insertion sequence:IS1C" gene complement(289873..290376) /gene="insB" /locus_tag="b0274" /gene_synonym="ECK0022" /db_xref="ECOCYC:G6145" /db_xref="EcoGene:EG40002" /db_xref="GeneID:944950" CDS complement(289873..290376) /gene="insB" /locus_tag="b0274" /gene_synonym="ECK0022" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 transposase B" /protein_id="NP_414808.1" /db_xref="GI:16128259" /db_xref="ASAP:ABE-0000948" /db_xref="ECOCYC:G6145" /db_xref="EcoGene:EG40002" /db_xref="GeneID:944950" /translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHY LNIKHYQ" gene complement(290295..290570) /gene="insA" /locus_tag="b0275" /gene_synonym="ECK0023" /db_xref="ECOCYC:G6146" /db_xref="EcoGene:EG40001" /db_xref="GeneID:944951" CDS complement(290295..290570) /gene="insA" /locus_tag="b0275" /gene_synonym="ECK0023" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 repressor TnpA" /protein_id="NP_414809.1" /db_xref="GI:16128260" /db_xref="ASAP:ABE-0000951" /db_xref="ECOCYC:G6146" /db_xref="EcoGene:EG40001" /db_xref="GeneID:944951" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" gene 290628..291455 /gene="yagJ" /locus_tag="b0276" /gene_synonym="ECK0275; JW0270" /pseudo /db_xref="ECOCYC:G6147" /db_xref="EcoGene:EG13549" /db_xref="GeneID:949094" CDS 290628..291455 /gene="yagJ" /locus_tag="b0276" /gene_synonym="ECK0275; JW0270" /note="CP4-6 prophage; predicted protein;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000963" /db_xref="UniProtKB/Swiss-Prot:P77169" /db_xref="ECOCYC:G6147" /db_xref="EcoGene:EG13549" /db_xref="GeneID:949094" gene complement(291546..292172) /gene="yagK" /locus_tag="b0277" /gene_synonym="ECK0276; JW0271" /db_xref="ECOCYC:G6148" /db_xref="EcoGene:EG13550" /db_xref="GeneID:945847" CDS complement(291546..292172) /gene="yagK" /locus_tag="b0277" /gene_synonym="ECK0276; JW0271" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; conserved protein" /protein_id="NP_414811.1" /db_xref="GI:16128262" /db_xref="ASAP:ABE-0000965" /db_xref="UniProtKB/Swiss-Prot:P77657" /db_xref="ECOCYC:G6148" /db_xref="EcoGene:EG13550" /db_xref="GeneID:945847" /translation="MKTYQGTHGVHILEYQSKINKLLCYLTNRYPRLIAVRVDLHYPK IVDNGDNICCFPNLEPGVISRMRESLRAKLEADRTRKVREDKRIYRCPLFIIWAKEYS ESGKCHYHICLLFNKDAYYHLGDYDQDDNLRGMITGAWYSALRLERDDHPGLVHFPEN CKYVLDTNSTDFQQNYQALLTRLDYLTKVESKVFGEGDRNFGCSQIEL" gene complement(292444..293142) /gene="yagL" /locus_tag="b0278" /gene_synonym="ECK0277; JW0272" /db_xref="ECOCYC:G6149" /db_xref="EcoGene:EG13551" /db_xref="GeneID:945845" CDS complement(292444..293142) /gene="yagL" /locus_tag="b0278" /gene_synonym="ECK0277; JW0272" /function="Phage or Prophage Related" /note="DNA-binding protein" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; DNA-binding protein" /protein_id="NP_414812.1" /db_xref="GI:16128263" /db_xref="ASAP:ABE-0000970" /db_xref="UniProtKB/Swiss-Prot:P77607" /db_xref="ECOCYC:G6149" /db_xref="EcoGene:EG13551" /db_xref="GeneID:945845" /translation="MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQM RSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIH HEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFL IARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSIS LSTVKRHWNNGIIG" gene complement(293169..294023) /gene="yagM" /locus_tag="b0279" /gene_synonym="ECK0278; JW0273" /db_xref="ECOCYC:G6150" /db_xref="EcoGene:EG13552" /db_xref="GeneID:944959" CDS complement(293169..294023) /gene="yagM" /locus_tag="b0279" /gene_synonym="ECK0278; JW0273" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted protein" /protein_id="NP_414813.1" /db_xref="GI:16128264" /db_xref="ASAP:ABE-0000972" /db_xref="UniProtKB/Swiss-Prot:P71296" /db_xref="ECOCYC:G6150" /db_xref="EcoGene:EG13552" /db_xref="GeneID:944959" /translation="MSNSVTNFEMSSVLPGKKPCQGKNNESQVVQTTPIKKHSVTFKN QSSLGVIDHYARLTNKSHSSVIAEVVDLAIPILEKCNRHNWSINEIKNDLLKFSIKES INRSRGKTEVTLEEYCSLIWKTNIMSPLKIPIADYFQLNANDEFMGKDEKTVIRERLS SLRENYDMEKAIYIYNQRHFDVKHQSVSGYSNIILIHRTTFEGYYFDAGQALLLSTSQ LIIFGINEVLRRKGIVMPYPVVCWIDIYHVNEMVVMLPVLRKTDVSNRVNVPDDIIIN PYSQESRT" gene complement(294363..294803) /gene="yagN" /locus_tag="b0280" /gene_synonym="ECK0279; JW0274" /db_xref="ECOCYC:G6151" /db_xref="EcoGene:EG13553" /db_xref="GeneID:945349" CDS complement(294363..294803) /gene="yagN" /locus_tag="b0280" /gene_synonym="ECK0279; JW0274" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted protein" /protein_id="NP_414814.1" /db_xref="GI:16128265" /db_xref="ASAP:ABE-0000976" /db_xref="UniProtKB/Swiss-Prot:P71297" /db_xref="ECOCYC:G6151" /db_xref="EcoGene:EG13553" /db_xref="GeneID:945349" /translation="MATPATVSIEPTLAAIRARWCINSSKTTQSFNDPASMEEVVEYL KGTYSALRKSVACAKLKILHLKQRMQNATNFLARLMSCKNQASRSHHSTAKSAKSALS SDSGDGSDPDPEPETFPSAFITTPTNSIMLKAFFANISITEVAK" gene complement(294920..296320) /gene="intF" /locus_tag="b0281" /gene_synonym="ECK0280; JW0275; yagO" /db_xref="ECOCYC:G6152" /db_xref="EcoGene:EG13554" /db_xref="GeneID:947351" CDS complement(294920..296320) /gene="intF" /locus_tag="b0281" /gene_synonym="ECK0280; JW0275; yagO" /function="Phage or Prophage Related" /note="putative phage integrase" /codon_start=1 /transl_table=11 /product="CP4-6 prophage; predicted phage integrase" /protein_id="NP_414815.1" /db_xref="GI:16128266" /db_xref="ASAP:ABE-0000979" /db_xref="UniProtKB/Swiss-Prot:P71298" /db_xref="ECOCYC:G6152" /db_xref="EcoGene:EG13554" /db_xref="GeneID:947351" /translation="MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLP EGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEAR RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKR PYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKE QLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW ILNEAGITIKNNVDMR" gene 296430..296478 /gene="ptwF" /locus_tag="b4629" /gene_synonym="ECK4462" /pseudo /db_xref="EcoGene:EG31171" /db_xref="GeneID:5625555" tRNA 296430..296478 /gene="ptwF" /locus_tag="b4629" /gene_synonym="ECK4462" /product="tRNA-OTHER" /pseudo /db_xref="EcoGene:EG31171" /db_xref="GeneID:5625555" gene complement(296605..296943) /gene="yagP" /locus_tag="b4694" /old_locus_tag="b0282" /gene_synonym="ECK0281; JW0276" /pseudo /db_xref="EcoGene:EG13555" /db_xref="GeneID:7751633" CDS complement(296605..296943) /gene="yagP" /locus_tag="b4694" /old_locus_tag="b0282" /gene_synonym="ECK0281; JW0276" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /note="pseudogene, LysR family, fragment;putative regulator; Not classified; putative transcriptional regulator LYSR-type" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000982" /db_xref="UniProtKB/Swiss-Prot:P75684" /db_xref="EcoGene:EG13555" /db_xref="GeneID:7751633" gene complement(296938..297015) /gene="ykgT" /locus_tag="b4695" /old_locus_tag="b0282" /gene_synonym="ECK4508; yagP" /pseudo /db_xref="EcoGene:EG14496" /db_xref="GeneID:7751634" CDS complement(296938..297015) /gene="ykgT" /locus_tag="b4695" /old_locus_tag="b0282" /gene_synonym="ECK4508; yagP" /note="Pseudogene, MobA-related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14496" /db_xref="GeneID:7751634" gene complement(296994..297950) /gene="paoD" /locus_tag="b0283" /gene_synonym="ECK0282; JW0277; yagQ" /db_xref="ECOCYC:G6154" /db_xref="EcoGene:EG13556" /db_xref="GeneID:945010" CDS complement(296994..297950) /gene="paoD" /locus_tag="b0283" /gene_synonym="ECK0282; JW0277; yagQ" /codon_start=1 /transl_table=11 /product="moco insertion factor for PaoABC aldehyde oxidoreductase" /protein_id="NP_414817.1" /db_xref="GI:16128268" /db_xref="ASAP:ABE-0000984" /db_xref="UniProtKB/Swiss-Prot:P77183" /db_xref="ECOCYC:G6154" /db_xref="EcoGene:EG13556" /db_xref="GeneID:945010" /translation="MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLV TLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGE GSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQ TRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQID TDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQ IRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS" gene complement(297960..300158) /gene="paoC" /locus_tag="b0284" /gene_synonym="ECK0283; JW0278; yagR" /db_xref="ECOCYC:G6155" /db_xref="EcoGene:EG13557" /db_xref="GeneID:944961" CDS complement(297960..300158) /gene="paoC" /locus_tag="b0284" /gene_synonym="ECK0283; JW0278; yagR" /codon_start=1 /transl_table=11 /product="PaoABC aldehyde oxidoreductase, Moco-containing subunit" /protein_id="NP_414818.1" /db_xref="GI:16128269" /db_xref="ASAP:ABE-0000988" /db_xref="UniProtKB/Swiss-Prot:P77489" /db_xref="ECOCYC:G6155" /db_xref="EcoGene:EG13557" /db_xref="GeneID:944961" /translation="MKFDKPAGENPIDQLKVVGRPHDRIDGPLKTTGTARYAYEWHEE APNAAYGYIVGSAIAKGRLTALDTDAAQKAPGVLAVITASNAGALGKGDKNTARLLGG PTIEHYHQAIALVVAETFEQARAAASLVQAHYRRNKGAYSLADEKQAVNQPPEDTPDK NVGDFDGAFTSAAVKIDATYTTPDQSHMAMEPHASMAVWDGNKLTLWTSNQMIDWCRT DLAKTLKVPVENVRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIP NNTTHRPATLQHLRIGADQSGKITAISHESWSGNLPGGTPETAVQQSELLYAGANRHT GLRLATLDLPEGNAMRAPGEAPGLMALEIAIDELAEKAGIDPVEFRILNDTQVDPADP TRCFSRRQLIECLRTGADKFGWKQRNATPGQVRDGEWLVGHGVAAGFRNNLLEKSGAR VHLEQNGTVTVETDMTDIGTGSYTILAQTAAEMLGVPLEQVAVHLGDSSFPVSAGSGG QWGANTSTSGVYAACMKLREMIASAVGFDPEQSQFADGKITNGTRSATLHEATAGGRL TAEESIEFGTLSKEYQQSTFAGHFVEVGVHSATGEVRVRRMLAVCAAGRILNPKTARS QVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYEVPVHADIPKQEVIFLDDTDPIS SPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPITLDKLLDKLPDVV" gene complement(300155..301111) /gene="paoB" /locus_tag="b0285" /gene_synonym="ECK0284; JW0279; yagS" /db_xref="ECOCYC:G6156" /db_xref="EcoGene:EG13558" /db_xref="GeneID:945710" CDS complement(300155..301111) /gene="paoB" /locus_tag="b0285" /gene_synonym="ECK0284; JW0279; yagS" /codon_start=1 /transl_table=11 /product="PaoABC aldehyde oxidoreductase, FAD-containing subunit" /protein_id="NP_414819.1" /db_xref="GI:16128270" /db_xref="ASAP:ABE-0000990" /db_xref="UniProtKB/Swiss-Prot:P77324" /db_xref="ECOCYC:G6156" /db_xref="EcoGene:EG13558" /db_xref="GeneID:945710" /translation="MKAFTYERVNTPAEAALSAQRVPGAKFIAGGTNLLDLMKLEIET PTHLIDVNGLGLDKIEVTDAGGLRIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQ LRNQATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIAT HPSDMAVAMRLLDAVVETITPEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTL PPPLGGKHIYRKVRDRASYAFALVSVAAIIQPDGSGRVALGGVAHKPWRIEAADAQLS QGAQAVYDTLFASAHPTAENTFKLLLAKRTLASVLAEARAQA" gene complement(301108..301797) /gene="paoA" /locus_tag="b0286" /gene_synonym="ECK0285; JW0280; yagT" /db_xref="ECOCYC:G6157" /db_xref="EcoGene:EG13559" /db_xref="GeneID:945330" CDS complement(301108..301797) /gene="paoA" /locus_tag="b0286" /gene_synonym="ECK0285; JW0280; yagT" /function="putative enzyme; Not classified" /note="putative xanthine dehydrogenase" /codon_start=1 /transl_table=11 /product="PaoABC aldehyde oxidoreductase, 2Fe-2S subunit" /protein_id="NP_414820.1" /db_xref="GI:16128271" /db_xref="ASAP:ABE-0000992" /db_xref="UniProtKB/Swiss-Prot:P77165" /db_xref="ECOCYC:G6157" /db_xref="EcoGene:EG13559" /db_xref="GeneID:945330" /translation="MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPH STLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHG QCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGY CTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILA AIEDAAGEIKS" gene 302215..302829 /gene="yagU" /locus_tag="b0287" /gene_synonym="ECK0286; JW0281" /db_xref="ECOCYC:G6158" /db_xref="EcoGene:EG13560" /db_xref="GeneID:945677" CDS 302215..302829 /gene="yagU" /locus_tag="b0287" /gene_synonym="ECK0286; JW0281" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF1440 family" /protein_id="NP_414821.1" /db_xref="GI:16128272" /db_xref="ASAP:ABE-0000995" /db_xref="UniProtKB/Swiss-Prot:P0AAA1" /db_xref="ECOCYC:G6158" /db_xref="EcoGene:EG13560" /db_xref="GeneID:945677" /translation="MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSP VDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWV GVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDL PWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR" gene complement(303077..303406) /gene="ykgJ" /locus_tag="b0288" /gene_synonym="ECK0287; JW0282" /db_xref="ECOCYC:G6159" /db_xref="EcoGene:EG14323" /db_xref="GeneID:945905" CDS complement(303077..303406) /gene="ykgJ" /locus_tag="b0288" /gene_synonym="ECK0287; JW0282" /function="putative carrier; Not classified" /GO_function="GO:0009055 - electron carrier activity" /note="putative ferredoxin" /codon_start=1 /transl_table=11 /product="predicted ferredoxin" /protein_id="NP_414822.1" /db_xref="GI:16128273" /db_xref="ASAP:ABE-0000997" /db_xref="UniProtKB/Swiss-Prot:P0AAL9" /db_xref="ECOCYC:G6159" /db_xref="EcoGene:EG14323" /db_xref="GeneID:945905" /translation="MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPF HRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARA KYGLTPL" gene complement(303719..304429) /gene="yagV" /locus_tag="b0289" /gene_synonym="ECK0288; JW5030" /db_xref="ECOCYC:G6160" /db_xref="EcoGene:EG13561" /db_xref="GeneID:946631" CDS complement(303719..304429) /gene="yagV" /locus_tag="b0289" /gene_synonym="ECK0288; JW5030" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414823.2" /db_xref="GI:90111108" /db_xref="ASAP:ABE-0001000" /db_xref="UniProtKB/Swiss-Prot:P77263" /db_xref="ECOCYC:G6160" /db_xref="EcoGene:EG13561" /db_xref="GeneID:946631" /translation="MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFV SKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFY YHGPRDNRERYYRVSFREVPTRNHTRRSPTGGVVSTEPVVVMDTILVVRPRQVQFKWS FDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYN DKFIKISDSCPAKPPSAD" gene complement(304398..306041) /gene="yagW" /locus_tag="b0290" /gene_synonym="ECK0289; JW0284" /db_xref="ECOCYC:G6161" /db_xref="EcoGene:EG13562" /db_xref="GeneID:947349" CDS complement(304398..306041) /gene="yagW" /locus_tag="b0290" /gene_synonym="ECK0289; JW0284" /function="putative factor; Not classified" /note="putative receptor" /codon_start=1 /transl_table=11 /product="predicted receptor" /protein_id="NP_414824.1" /db_xref="GI:16128275" /db_xref="ASAP:ABE-0001002" /db_xref="UniProtKB/Swiss-Prot:P77694" /db_xref="ECOCYC:G6161" /db_xref="EcoGene:EG13562" /db_xref="GeneID:947349" /translation="MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENN SDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDM WLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLS DAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANL RLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSI HIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNF FKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYT QTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGK AKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVK FSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN" gene complement(306031..308556) /gene="yagX" /locus_tag="b0291" /gene_synonym="ECK0290; JW0285" /db_xref="ECOCYC:G6162" /db_xref="EcoGene:EG13563" /db_xref="GeneID:947606" CDS complement(306031..308556) /gene="yagX" /locus_tag="b0291" /gene_synonym="ECK0290; JW0285" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="predicted aromatic compound dioxygenase" /protein_id="NP_414825.1" /db_xref="GI:16128276" /db_xref="ASAP:ABE-0001005" /db_xref="UniProtKB/Swiss-Prot:P77802" /db_xref="ECOCYC:G6162" /db_xref="EcoGene:EG13563" /db_xref="GeneID:947606" /translation="MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQ AFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASV SEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSED IGQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIG SGQQDSELYKAMYERDFAGHRFAGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASST IFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEV IVNGRVISKRTQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLA GASTSGSLSTLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSI SATLPGGFSSLWVNQEKTRIGNQLRRSDADNRAIGGTLNLNSLWSKLGTFSISYNDDR RYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLPLGNWFS AGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARY ASGTLNVNSAADGYVNTNLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISA KINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSRLTLYPGNVAVI EPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYS GNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENES" gene complement(308582..309250) /gene="matC" /locus_tag="b0292" /gene_synonym="ECK0291; JW0286; yagY" /db_xref="ECOCYC:G6163" /db_xref="EcoGene:EG13564" /db_xref="GeneID:948806" CDS complement(308582..309250) /gene="matC" /locus_tag="b0292" /gene_synonym="ECK0291; JW0286; yagY" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414826.1" /db_xref="GI:16128277" /db_xref="ASAP:ABE-0001007" /db_xref="UniProtKB/Swiss-Prot:P77188" /db_xref="ECOCYC:G6163" /db_xref="EcoGene:EG13564" /db_xref="GeneID:948806" /translation="MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNS TDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPAD EKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKF IPVK" gene complement(309308..309895) /gene="matB" /locus_tag="b0293" /gene_synonym="ECK0292; ecpA; JW0287; yagZ" /db_xref="ECOCYC:G6164" /db_xref="EcoGene:EG13565" /db_xref="GeneID:948759" CDS complement(309308..309895) /gene="matB" /locus_tag="b0293" /gene_synonym="ECK0292; ecpA; JW0287; yagZ" /codon_start=1 /transl_table=11 /product="cryptic Mat fimbrillin gene" /protein_id="NP_414827.1" /db_xref="GI:16128278" /db_xref="ASAP:ABE-0001009" /db_xref="UniProtKB/Swiss-Prot:P0AAA3" /db_xref="ECOCYC:G6164" /db_xref="EcoGene:EG13565" /db_xref="GeneID:948759" /translation="MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSK LVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSG STLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSII SGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS" mat_peptide complement(309311..309829) /gene="matB" /locus_tag="b0293" /gene_synonym="ECK0292; ecpA; JW0287; yagZ" /product="cryptic Mat fimbrillin gene" /experiment="N-terminus verified by Edman degradation: PMID 16522795" gene complement(309970..310560) /gene="matA" /locus_tag="b0294" /gene_synonym="ECK0293; JW5031; ykgK" /db_xref="ECOCYC:G6165" /db_xref="EcoGene:EG14324" /db_xref="GeneID:944966" CDS complement(309970..310560) /gene="matA" /locus_tag="b0294" /gene_synonym="ECK0293; JW5031; ykgK" /function="putative regulator; Not classified" /note="putative regulator" /codon_start=1 /transl_table=11 /product="predicted regulator" /protein_id="NP_414828.1" /db_xref="GI:16128279" /db_xref="ASAP:ABE-0001011" /db_xref="UniProtKB/Swiss-Prot:P71301" /db_xref="ECOCYC:G6165" /db_xref="EcoGene:EG14324" /db_xref="GeneID:944966" /translation="MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIV DIDRLIYLSLEKIRKDFVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALA NYWYYNSNIRGVVYAGLSRDIRKELVYVINGRFLRKDIKKDKITDREMEIIRMTAQGM QPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ" gene 311336..311563 /gene="ykgL" /locus_tag="b0295" /gene_synonym="ECK0294; JW5033" /db_xref="ECOCYC:G6166" /db_xref="EcoGene:EG14325" /db_xref="GeneID:944962" CDS 311336..311563 /gene="ykgL" /locus_tag="b0295" /gene_synonym="ECK0294; JW5033" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414829.1" /db_xref="GI:16128280" /db_xref="ASAP:ABE-0001019" /db_xref="UniProtKB/Swiss-Prot:P56257" /db_xref="ECOCYC:G6166" /db_xref="EcoGene:EG14325" /db_xref="GeneID:944962" /translation="MQAAPQREETEWRVQSKRGLMPAYRGEAGQQVNIKIMEYSERNV RQLASNEQEEYIPRKINVGVINTPTLIRSDY" gene complement(311598..311738) /gene="ykgO" /locus_tag="b4506" /gene_synonym="ECK0295; JW5034; rpmJ2" /db_xref="ECOCYC:G0-10434" /db_xref="EcoGene:EG14432" /db_xref="GeneID:1450238" CDS complement(311598..311738) /gene="ykgO" /locus_tag="b4506" /gene_synonym="ECK0295; JW5034; rpmJ2" /codon_start=1 /transl_table=11 /product="rpmJ (L36) paralog" /protein_id="YP_588437.1" /db_xref="GI:94541137" /db_xref="ASAP:ABE-0285027" /db_xref="ECOCYC:G0-10434" /db_xref="EcoGene:EG14432" /db_xref="GeneID:1450238" /translation="MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKK KR" gene complement(311738..312001) /gene="ykgM" /locus_tag="b0296" /gene_synonym="ECK0296; JW5035" /db_xref="ECOCYC:G6167" /db_xref="EcoGene:EG14326" /db_xref="GeneID:944960" CDS complement(311738..312001) /gene="ykgM" /locus_tag="b0296" /gene_synonym="ECK0296; JW5035" /codon_start=1 /transl_table=11 /product="rpmE (L31) paralog" /protein_id="NP_414830.1" /db_xref="GI:16128281" /db_xref="ASAP:ABE-0001021" /db_xref="UniProtKB/Swiss-Prot:P0A7N1" /db_xref="ECOCYC:G6167" /db_xref="EcoGene:EG14326" /db_xref="GeneID:944960" /translation="MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPY VTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA" gene complement(312365..312466) /gene="ykgR" /locus_tag="b4671" /gene_synonym="ECK4486" /db_xref="EcoGene:EG14476" /db_xref="GeneID:7751635" CDS complement(312365..312466) /gene="ykgR" /locus_tag="b4671" /gene_synonym="ECK4486" /codon_start=1 /transl_table=11 /product="expressed protein" /protein_id="YP_002791238.1" /db_xref="GI:226524699" /db_xref="EcoGene:EG14476" /db_xref="GeneID:7751635" /translation="MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY" gene complement(312940..313029) /gene="ykgP" /locus_tag="b4630" /gene_synonym="ECK4446" /pseudo /db_xref="EcoGene:EG14433" /db_xref="GeneID:5625556" CDS complement(312940..313029) /gene="ykgP" /locus_tag="b4630" /gene_synonym="ECK4446" /note="pseudogene, oxidoreductase family" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14433" /db_xref="GeneID:5625556" gene 313581..314452 /gene="eaeH" /locus_tag="b0297" /gene_synonym="ECK0297; JW0291" /pseudo /db_xref="EcoGene:EG12161" /db_xref="GeneID:944957" CDS 313581..314452 /gene="eaeH" /locus_tag="b0297" /gene_synonym="ECK0297; JW0291" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="pseudogene, attaching and effacing protein homology;factor; Not classified" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001025" /db_xref="UniProtKB/Swiss-Prot:P36943" /db_xref="EcoGene:EG12161" /db_xref="GeneID:944957" repeat_region 314450..315707 /mobile_element="insertion sequence:IS3A" gene 314515..314814 /gene="insE" /locus_tag="b0298" /gene_synonym="ECK0298" /db_xref="ECOCYC:G6168" /db_xref="EcoGene:EG40005" /db_xref="GeneID:944952" CDS 314515..314814 /gene="insE" /locus_tag="b0298" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="NP_414832.2" /db_xref="GI:226524700" /db_xref="ASAP:ABE-0001028" /db_xref="ECOCYC:G6168" /db_xref="EcoGene:EG40005" /db_xref="GeneID:944952" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 314811..315677 /gene="insF" /locus_tag="b0299" /gene_synonym="ECK0299" /db_xref="ECOCYC:G6169" /db_xref="EcoGene:EG40006" /db_xref="GeneID:944948" CDS 314811..315677 /gene="insF" /locus_tag="b0299" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="NP_414833.1" /db_xref="GI:16128284" /db_xref="ASAP:ABE-0001030" /db_xref="ECOCYC:G6169" /db_xref="EcoGene:EG40006" /db_xref="GeneID:944948" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(315710..316393) /gene="ykgA" /locus_tag="b0300" /gene_synonym="ECK0300; JW5037" /pseudo /db_xref="ECOCYC:G6170" /db_xref="EcoGene:EG13381" /db_xref="GeneID:944956" CDS complement(315710..316393) /gene="ykgA" /locus_tag="b0300" /gene_synonym="ECK0300; JW5037" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="pseudogene, AraC family;putative regulator; Not classified; putative ARAC-type regulatory protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001032" /db_xref="UniProtKB/Swiss-Prot:P77601" /db_xref="ECOCYC:G6170" /db_xref="EcoGene:EG13381" /db_xref="GeneID:944956" gene 316663..316791 /gene="ykgQ" /locus_tag="b4631" /gene_synonym="ECK4454" /pseudo /db_xref="EcoGene:EG14443" /db_xref="GeneID:5625557" CDS 316663..316791 /gene="ykgQ" /locus_tag="b4631" /gene_synonym="ECK4454" /note="pseudogene, putative dehydrogenase" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14443" /db_xref="GeneID:5625557" gene complement(316950..317543) /gene="ykgB" /locus_tag="b0301" /gene_synonym="ECK0301; JW5038" /db_xref="ECOCYC:G6171" /db_xref="EcoGene:EG13579" /db_xref="GeneID:944974" CDS complement(316950..317543) /gene="ykgB" /locus_tag="b0301" /gene_synonym="ECK0301; JW5038" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF417 family" /protein_id="NP_414835.2" /db_xref="GI:90111110" /db_xref="ASAP:ABE-0001038" /db_xref="UniProtKB/Swiss-Prot:P75685" /db_xref="ECOCYC:G6171" /db_xref="EcoGene:EG13579" /db_xref="GeneID:944974" /translation="MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSIT PFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVIIAL LVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLV LKDTLMLAGAVMIMADSAREILKQRSNESSSTLKTEY" gene complement(317555..317791) /gene="ykgI" /locus_tag="b0303" /gene_synonym="ECK0302; JW5039" /db_xref="ECOCYC:G6173" /db_xref="EcoGene:EG14278" /db_xref="GeneID:945658" CDS complement(317555..317791) /gene="ykgI" /locus_tag="b0303" /gene_synonym="ECK0302; JW5039" /note="the overlapping ORF b0302 on the opposite strand is no longer thought to be an actual gene, and has been deaccessioned" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414837.2" /db_xref="GI:90111111" /db_xref="ASAP:ABE-0001043" /db_xref="UniProtKB/Swiss-Prot:P75687" /db_xref="ECOCYC:G6173" /db_xref="EcoGene:EG14278" /db_xref="GeneID:945658" /translation="MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLE DTIADIARKYNASSWKVTSMRIDNNSTATAVLYK" gene complement(317900..319225) /gene="ykgC" /locus_tag="b0304" /gene_synonym="ECK0303; JW5040" /db_xref="ECOCYC:G6174" /db_xref="EcoGene:EG13580" /db_xref="GeneID:946092" CDS complement(317900..319225) /gene="ykgC" /locus_tag="b0304" /gene_synonym="ECK0303; JW5040" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="predicted pyridine nucleotide-disulfide oxidoreductase" /protein_id="NP_414838.2" /db_xref="GI:90111112" /db_xref="ASAP:ABE-0001048" /db_xref="UniProtKB/Swiss-Prot:P77212" /db_xref="ECOCYC:G6174" /db_xref="EcoGene:EG13580" /db_xref="GeneID:946092" /translation="MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCI NIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFI NNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGH LGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIIL NAHVERISHHENQVQVHSEHAQLAVDALLIASGRQPATASLHPENAGIAVNERGAIVV DKRLHTTADNIWAMGDVTGGLQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFM TPPLSRVGMTEEQARESGADIQVVTLPVAAIPRARVMNDTRGVLKAIVDNKTQRMLGA SLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDLFSLVK" gene 319451..320305 /gene="ykgD" /locus_tag="b0305" /gene_synonym="ECK0304; JW0298" /db_xref="ECOCYC:G6175" /db_xref="EcoGene:EG13581" /db_xref="GeneID:945616" CDS 319451..320305 /gene="ykgD" /locus_tag="b0305" /gene_synonym="ECK0304; JW0298" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="putative ARAC-type regulatory protein" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_414839.1" /db_xref="GI:16128290" /db_xref="ASAP:ABE-0001054" /db_xref="UniProtKB/Swiss-Prot:P77379" /db_xref="ECOCYC:G6175" /db_xref="EcoGene:EG13581" /db_xref="GeneID:945616" /translation="MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHAL TQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFL TSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREW IAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVS GTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYR ERVRQLAP" gene 320832..321551 /gene="ykgE" /locus_tag="b0306" /gene_synonym="ECK0305; JW5041" /db_xref="ECOCYC:G6176" /db_xref="EcoGene:EG13582" /db_xref="GeneID:948438" CDS 320832..321551 /gene="ykgE" /locus_tag="b0306" /gene_synonym="ECK0305; JW5041" /function="putative enzyme; Not classified" /note="putative dehydrogenase subunit" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase" /protein_id="NP_414840.1" /db_xref="GI:16128291" /db_xref="ASAP:ABE-0001058" /db_xref="UniProtKB/Swiss-Prot:P77252" /db_xref="ECOCYC:G6176" /db_xref="EcoGene:EG13582" /db_xref="GeneID:948438" /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAA KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVAHLMEVRPEYLIGADVSCLLNISG RLQREGQKVKVMHIAEVLMSR" gene 321562..322989 /gene="ykgF" /locus_tag="b0307" /gene_synonym="ECK0306; JW0300" /db_xref="ECOCYC:G6177" /db_xref="EcoGene:EG13583" /db_xref="GeneID:944980" CDS 321562..322989 /gene="ykgF" /locus_tag="b0307" /gene_synonym="ECK0306; JW0300" /codon_start=1 /transl_table=11 /product="predicted electron transport protein with ferridoxin-like domai" /protein_id="NP_414841.1" /db_xref="GI:16128292" /db_xref="ASAP:ABE-0001060" /db_xref="UniProtKB/Swiss-Prot:P77536" /db_xref="ECOCYC:G6177" /db_xref="EcoGene:EG13583" /db_xref="GeneID:944980" /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVYFARTKEDATRYILQVAQ RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDNVCPVRIPLSKLILRHRRVMAEK GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR DLPEADGESFRSWFKKHQAQEKKNG" gene 322982..323677 /gene="ykgG" /locus_tag="b0308" /gene_synonym="ECK0307; JW5042" /db_xref="ECOCYC:G6178" /db_xref="EcoGene:EG13584" /db_xref="GeneID:945906" CDS 322982..323677 /gene="ykgG" /locus_tag="b0308" /gene_synonym="ECK0307; JW5042" /function="putative transport; Not classified" /note="putative transporter" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_414842.4" /db_xref="GI:90111113" /db_xref="ASAP:ABE-0001062" /db_xref="UniProtKB/Swiss-Prot:P77433" /db_xref="ECOCYC:G6178" /db_xref="EcoGene:EG13584" /db_xref="GeneID:945906" /translation="MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQ QRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISER LQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLP EYSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVH GPVKAVYLIIEDC" gene complement(323920..324588) /gene="ykgH" /locus_tag="b0310" /gene_synonym="ECK0308; JW0302" /db_xref="ECOCYC:G6180" /db_xref="EcoGene:EG13585" /db_xref="GeneID:947513" CDS complement(323920..324588) /gene="ykgH" /locus_tag="b0310" /gene_synonym="ECK0308; JW0302" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein" /protein_id="NP_414844.1" /db_xref="GI:16128295" /db_xref="ASAP:ABE-0001066" /db_xref="UniProtKB/Swiss-Prot:P77180" /db_xref="ECOCYC:G6180" /db_xref="EcoGene:EG13585" /db_xref="GeneID:947513" /translation="MREQIKQDIDLIEILFYLKKKIRVILFIMAICMAMVLLFLYINK DNIKVIYSLKINQTTPGILVSCDSNNNFACQTTMTEDVIQRITTFFHTSPDVKNREIR LEWSGDKRALPTAEEEISRVQASIIKWYASEYHNGRQVLDEIQTPSAINSELYTKMIY LTRNWSLYPNGDGCVTISSPEIKNKYPAAICLALGFFLSIVISVMFCLVKKMVDEYQQ NSGQ" gene complement(324801..326471) /gene="betA" /locus_tag="b0311" /gene_synonym="ECK0309; JW0303" /db_xref="ECOCYC:EG10109" /db_xref="EcoGene:EG10109" /db_xref="GeneID:945716" CDS complement(324801..326471) /gene="betA" /locus_tag="b0311" /gene_synonym="ECK0309; JW0303" /EC_number="1.1.99.1" /function="enzyme; Osmotic adaptation" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006578 - betaine biosynthetic process; GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="choline dehydrogenase, a flavoprotein" /protein_id="NP_414845.1" /db_xref="GI:16128296" /db_xref="ASAP:ABE-0001070" /db_xref="UniProtKB/Swiss-Prot:P17444" /db_xref="ECOCYC:EG10109" /db_xref="EcoGene:EG10109" /db_xref="GeneID:945716" /translation="MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFR TQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAL DLDNWAQEPGLENWSYLDCLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFEA MIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRT HAMTDHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAE LLAEFDIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGG TGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSP SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISP GVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIM PQIITGNLNATTIMIGEKIADMIRGQEALPRSTAGYFVANGMPVRAKK" gene complement(326485..327957) /gene="betB" /locus_tag="b0312" /gene_synonym="ECK0310; JW0304" /db_xref="ECOCYC:EG10110" /db_xref="EcoGene:EG10110" /db_xref="GeneID:947376" CDS complement(326485..327957) /gene="betB" /locus_tag="b0312" /gene_synonym="ECK0310; JW0304" /EC_number="1.2.1.8" /function="enzyme; Osmotic adaptation" /GO_process="GO:0006578 - betaine biosynthetic process; GO:0006970 - response to osmotic stress" /note="NAD+-dependent betaine aldehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="betaine aldehyde dehydrogenase, NAD-dependent" /protein_id="NP_414846.1" /db_xref="GI:16128297" /db_xref="ASAP:ABE-0001072" /db_xref="UniProtKB/Swiss-Prot:P17445" /db_xref="ECOCYC:EG10110" /db_xref="EcoGene:EG10110" /db_xref="GeneID:947376" /translation="MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGRE DVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETS TVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIAL WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTE HPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMM ANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHR DNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPV MSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAE MPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF" mat_peptide complement(326488..327954) /gene="betB" /locus_tag="b0312" /gene_synonym="ECK0310; JW0304" /product="betaine aldehyde dehydrogenase, NAD-dependent" /experiment="N-terminus verified by Edman degradation: PMID 1956285" gene complement(327971..328558) /gene="betI" /locus_tag="b0313" /gene_synonym="ECK0311; JW0305" /db_xref="ECOCYC:EG10111" /db_xref="EcoGene:EG10111" /db_xref="GeneID:944981" CDS complement(327971..328558) /gene="betI" /locus_tag="b0313" /gene_synonym="ECK0311; JW0305" /function="putative regulator; Osmotic adaptation" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006970 - response to osmotic stress; GO:0006350 - transcription" /note="probably transcriptional repressor of bet genes" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor" /protein_id="NP_414847.3" /db_xref="GI:49176011" /db_xref="ASAP:ABE-0001076" /db_xref="UniProtKB/Swiss-Prot:P17446" /db_xref="ECOCYC:EG10111" /db_xref="EcoGene:EG10111" /db_xref="GeneID:944981" /translation="MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTG IISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVS SAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAAL IDGLWLRAALSGKPLDKTRANSLTRHFITQHLPTD" gene 328687..330720 /gene="betT" /locus_tag="b0314" /gene_synonym="ECK0312; JW0306" /db_xref="ECOCYC:EG10112" /db_xref="EcoGene:EG10112" /db_xref="GeneID:945079" CDS 328687..330720 /gene="betT" /locus_tag="b0314" /gene_synonym="ECK0312; JW0306" /function="transport; Transport of small molecules: Other" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006578 - betaine biosynthetic process" /note="high-affinity choline transport" /codon_start=1 /transl_table=11 /product="choline transporter of high affinity" /protein_id="NP_414848.1" /db_xref="GI:16128299" /db_xref="ASAP:ABE-0001080" /db_xref="UniProtKB/Swiss-Prot:P0ABC9" /db_xref="ECOCYC:EG10112" /db_xref="EcoGene:EG10112" /db_xref="GeneID:945079" /translation="MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIG RTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFA AGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMA LGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLN YGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVL FMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFV GLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHP ERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWL RVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRE SANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRG AYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYR LETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA" gene 331595..332683 /gene="yahA" /locus_tag="b0315" /gene_synonym="ECK0313; JW0307" /db_xref="ECOCYC:EG11236" /db_xref="EcoGene:EG11236" /db_xref="GeneID:947459" CDS 331595..332683 /gene="yahA" /locus_tag="b0315" /gene_synonym="ECK0313; JW0307" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="c-di-GMP-specific phosphodiesterase" /protein_id="NP_414849.1" /db_xref="GI:16128300" /db_xref="ASAP:ABE-0001086" /db_xref="UniProtKB/Swiss-Prot:P21514" /db_xref="ECOCYC:EG11236" /db_xref="EcoGene:EG11236" /db_xref="GeneID:947459" /translation="MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTE ISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDN HYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFI PLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNL VNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQA FPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKG VHFLQGYLYSPPVPGNKFISEWVMKAGG" gene complement(332725..333657) /gene="yahB" /locus_tag="b0316" /gene_synonym="ECK0314; JW0308" /db_xref="ECOCYC:G6181" /db_xref="EcoGene:EG13586" /db_xref="GeneID:945278" CDS complement(332725..333657) /gene="yahB" /locus_tag="b0316" /gene_synonym="ECK0314; JW0308" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator LYSR-type" /codon_start=1 /transl_table=11 /product="predicted DNA-bindng transcriptional regulator" /protein_id="NP_414850.1" /db_xref="GI:16128301" /db_xref="ASAP:ABE-0001088" /db_xref="UniProtKB/Swiss-Prot:P77700" /db_xref="ECOCYC:G6181" /db_xref="EcoGene:EG13586" /db_xref="GeneID:945278" /translation="MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRME TGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICIN QLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG GIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH GQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT QHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN" gene complement(333749..334246) /gene="yahC" /locus_tag="b0317" /gene_synonym="ECK0315; JW0309" /db_xref="ECOCYC:G6182" /db_xref="EcoGene:EG13587" /db_xref="GeneID:947337" CDS complement(333749..334246) /gene="yahC" /locus_tag="b0317" /gene_synonym="ECK0315; JW0309" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein" /protein_id="NP_414851.1" /db_xref="GI:16128302" /db_xref="ASAP:ABE-0001091" /db_xref="UniProtKB/Swiss-Prot:P77219" /db_xref="ECOCYC:G6182" /db_xref="EcoGene:EG13587" /db_xref="GeneID:947337" /translation="MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCS FYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLASVSGLSAFWASVITTVPFSAVV VWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGVISEYGGQKLSEATT KRDGY" gene 334504..335109 /gene="yahD" /locus_tag="b0318" /gene_synonym="ECK0316; JW0310" /db_xref="ECOCYC:G6183" /db_xref="EcoGene:EG13588" /db_xref="GeneID:947681" CDS 334504..335109 /gene="yahD" /locus_tag="b0318" /gene_synonym="ECK0316; JW0310" /function="putative regulator; Not classified" /note="putative transcription factor" /codon_start=1 /transl_table=11 /product="ankyrin repeat protein" /protein_id="NP_414852.1" /db_xref="GI:16128303" /db_xref="ASAP:ABE-0001095" /db_xref="UniProtKB/Swiss-Prot:P77736" /db_xref="ECOCYC:G6183" /db_xref="EcoGene:EG13588" /db_xref="GeneID:947681" /translation="MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAIT LASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVT RFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIV QLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA" gene 335149..336012 /gene="yahE" /locus_tag="b0319" /gene_synonym="ECK0317; JW0311" /db_xref="ECOCYC:G6184" /db_xref="EcoGene:EG13589" /db_xref="GeneID:947134" CDS 335149..336012 /gene="yahE" /locus_tag="b0319" /gene_synonym="ECK0317; JW0311" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414853.1" /db_xref="GI:16128304" /db_xref="ASAP:ABE-0001097" /db_xref="UniProtKB/Swiss-Prot:P77297" /db_xref="ECOCYC:G6184" /db_xref="EcoGene:EG13589" /db_xref="GeneID:947134" /translation="MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEE YDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAV NFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNI ASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLS AITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCA LSQTYGGNYVS" gene 336002..337549 /gene="yahF" /locus_tag="b0320" /gene_synonym="ECK0318; JW0312" /db_xref="ECOCYC:G6185" /db_xref="EcoGene:EG13590" /db_xref="GeneID:947298" CDS 336002..337549 /gene="yahF" /locus_tag="b0320" /gene_synonym="ECK0318; JW0312" /function="putative enzyme; Not classified" /note="putative oxidoreductase subunit" /codon_start=1 /transl_table=11 /product="predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain" /protein_id="NP_414854.1" /db_xref="GI:16128305" /db_xref="ASAP:ABE-0001099" /db_xref="UniProtKB/Swiss-Prot:P77187" /db_xref="ECOCYC:G6185" /db_xref="EcoGene:EG13590" /db_xref="GeneID:947298" /translation="MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNK GVLKNLGLLTPELEQAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYA TIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAH EKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQ LIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRK PVVVCFLDRGETPVDEQGLQFARGTKEAALKAVMLSGVKQENLDLHTLNQPLIADVRA RLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSIKHTFLD FGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIETI KEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREF ICKGEEA" gene 337549..338967 /gene="yahG" /locus_tag="b0321" /gene_synonym="ECK0319; JW0313" /db_xref="ECOCYC:G6186" /db_xref="EcoGene:EG13591" /db_xref="GeneID:945379" CDS 337549..338967 /gene="yahG" /locus_tag="b0321" /gene_synonym="ECK0319; JW0313" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414855.1" /db_xref="GI:16128306" /db_xref="ASAP:ABE-0001101" /db_xref="UniProtKB/Swiss-Prot:P77221" /db_xref="ECOCYC:G6186" /db_xref="EcoGene:EG13591" /db_xref="GeneID:945379" /translation="MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNM QVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAG PPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGV TSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDA MKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEF VASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPA QQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSR QMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAG IVHPPFACFEKAILGWCERYGV" repeat_region 338981..339338 /note="REP23 (repetitive extragenic palindromic) element; contains 8 REP sequences" gene 339389..340339 /gene="yahI" /locus_tag="b0323" /gene_synonym="ECK0321; JW0315" /db_xref="ECOCYC:G6188" /db_xref="EcoGene:EG13593" /db_xref="GeneID:944984" CDS 339389..340339 /gene="yahI" /locus_tag="b0323" /gene_synonym="ECK0321; JW0315" /function="putative enzyme; Not classified" /GO_process="GO:0006526 - arginine biosynthetic process; GO:0006221 - pyrimidine nucleotide biosynthetic process" /note="putative kinase" /codon_start=1 /transl_table=11 /product="carbamate kinase-like protein" /protein_id="NP_414857.1" /db_xref="GI:16128308" /db_xref="ASAP:ABE-0001107" /db_xref="UniProtKB/Swiss-Prot:P77624" /db_xref="ECOCYC:G6188" /db_xref="EcoGene:EG13593" /db_xref="GeneID:944984" /translation="MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASD YDIVLTHGNGPQVGLDLRRAEIAHKREGLPLTPLANCVADTQGGIGYLIQQALNNRLA RHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQKANPDWCFVEDAGRG YRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDL STALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSML PKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT" gene 340349..341731 /gene="yahJ" /locus_tag="b0324" /gene_synonym="ECK0322; JW0316" /db_xref="ECOCYC:G6189" /db_xref="EcoGene:EG13594" /db_xref="GeneID:944976" CDS 340349..341731 /gene="yahJ" /locus_tag="b0324" /gene_synonym="ECK0322; JW0316" /function="putative enzyme; Not classified" /GO_process="GO:0009310 - amine catabolic process" /note="putative deaminase" /codon_start=1 /transl_table=11 /product="predicted deaminase with metallo-dependent hydrolase domain" /protein_id="NP_414858.1" /db_xref="GI:16128309" /db_xref="ASAP:ABE-0001109" /db_xref="UniProtKB/Swiss-Prot:P77554" /db_xref="ECOCYC:G6189" /db_xref="EcoGene:EG13594" /db_xref="GeneID:944976" /translation="MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEAN NTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDAT LPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFP QHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHL HETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISI ASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNE QNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHK GQLVWGSVAG" gene 342108..343157 /gene="yahK" /locus_tag="b0325" /gene_synonym="ECK0323; JW0317" /db_xref="ECOCYC:G6190" /db_xref="EcoGene:EG13595" /db_xref="GeneID:944975" CDS 342108..343157 /gene="yahK" /locus_tag="b0325" /gene_synonym="ECK0323; JW0317" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase, Zn-dependent and NAD(P)-binding" /protein_id="NP_414859.1" /db_xref="GI:16128310" /db_xref="ASAP:ABE-0001113" /db_xref="UniProtKB/Swiss-Prot:P75691" /db_xref="ECOCYC:G6190" /db_xref="EcoGene:EG13595" /db_xref="GeneID:944975" /translation="MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDL HQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDG LENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAG ITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG ADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKS PEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRG DVKYRFVIDNRTLTD" gene 343400..344215 /gene="yahL" /locus_tag="b0326" /gene_synonym="ECK0324; JW0318" /db_xref="ECOCYC:G6191" /db_xref="EcoGene:EG13596" /db_xref="GeneID:944970" CDS 343400..344215 /gene="yahL" /locus_tag="b0326" /gene_synonym="ECK0324; JW0318" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414860.1" /db_xref="GI:16128311" /db_xref="ASAP:ABE-0001117" /db_xref="UniProtKB/Swiss-Prot:P77393" /db_xref="ECOCYC:G6191" /db_xref="EcoGene:EG13596" /db_xref="GeneID:944970" /translation="MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFK VLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMD YPDHPVKFVFHILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDC KCILLEYHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYP VFPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL" gene 344628..344873 /gene="yahM" /locus_tag="b0327" /gene_synonym="ECK0325; JW5044" /db_xref="ECOCYC:G6192" /db_xref="EcoGene:EG13597" /db_xref="GeneID:944969" CDS 344628..344873 /gene="yahM" /locus_tag="b0327" /gene_synonym="ECK0325; JW5044" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414861.2" /db_xref="GI:90111114" /db_xref="ASAP:ABE-0001120" /db_xref="UniProtKB/Swiss-Prot:P75692" /db_xref="ECOCYC:G6192" /db_xref="EcoGene:EG13597" /db_xref="GeneID:944969" /translation="MAVQLFKTLLNQIPLLSSLQSGTLPLFGYSGWGRPMKKAHTGES GLKWEAKDSSKLIGNKDHALRGLSSPMAVIRQIRLIT" gene complement(344890..345561) /gene="yahN" /locus_tag="b0328" /gene_synonym="ECK0326; JW0320" /db_xref="ECOCYC:G6193" /db_xref="EcoGene:EG13598" /db_xref="GeneID:944968" CDS complement(344890..345561) /gene="yahN" /locus_tag="b0328" /gene_synonym="ECK0326; JW0320" /function="putative enzyme; Not classified" /note="putative cytochrome subunit of dehydrogenase" /codon_start=1 /transl_table=11 /product="inner membrane protein, LysE transporter family; overproduction confers sensitivity to L-homoserine" /protein_id="NP_414862.1" /db_xref="GI:16128313" /db_xref="ASAP:ABE-0001122" /db_xref="UniProtKB/Swiss-Prot:P75693" /db_xref="ECOCYC:G6193" /db_xref="EcoGene:EG13598" /db_xref="GeneID:944968" /translation="MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQT SLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAW CSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTW ARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYE GVTQR" gene 345708..345983 /gene="yahO" /locus_tag="b0329" /gene_synonym="ECK0327; JW0321" /db_xref="ECOCYC:G6194" /db_xref="EcoGene:EG13599" /db_xref="GeneID:944985" CDS 345708..345983 /gene="yahO" /locus_tag="b0329" /gene_synonym="ECK0327; JW0321" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414863.1" /db_xref="GI:16128314" /db_xref="ASAP:ABE-0001130" /db_xref="UniProtKB/Swiss-Prot:P75694" /db_xref="ECOCYC:G6194" /db_xref="EcoGene:EG13599" /db_xref="GeneID:944985" /translation="MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDIS TSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK" repeat_region 346048..346077 /note="REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(346081..347667) /gene="prpR" /locus_tag="b0330" /gene_synonym="ECK0328; JW0322; yahP" /db_xref="ECOCYC:G6195" /db_xref="EcoGene:EG13600" /db_xref="GeneID:944987" CDS complement(346081..347667) /gene="prpR" /locus_tag="b0330" /gene_synonym="ECK0328; JW0322; yahP" /function="regulator; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0019395 - fatty acid oxidation; GO:0006350 - transcription" /note="regulator for prp operon" /codon_start=1 /transl_table=11 /product="propionate catabolism operon regulatory protein" /protein_id="NP_414864.1" /db_xref="GI:16128315" /db_xref="ASAP:ABE-0001133" /db_xref="UniProtKB/Swiss-Prot:P77743" /db_xref="ECOCYC:G6195" /db_xref="EcoGene:EG13600" /db_xref="GeneID:944987" /translation="MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQL GFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGK LTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAG LITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDM LGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSH PFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLP LQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILR LQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRE LRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDK TAAANYLGISRTTFWRRLKS" gene 347906..348796 /gene="prpB" /locus_tag="b0331" /gene_synonym="ECK0329; JW0323; yahQ" /db_xref="ECOCYC:G6196" /db_xref="EcoGene:EG13601" /db_xref="GeneID:944990" CDS 347906..348796 /gene="prpB" /locus_tag="b0331" /gene_synonym="ECK0329; JW0323; yahQ" /EC_number="4.1.3.30" /function="putative enzyme; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0019395 - fatty acid oxidation" /note="putative phosphonomutase 2" /codon_start=1 /transl_table=11 /product="2-methylisocitrate lyase" /protein_id="NP_414865.1" /db_xref="GI:16128316" /db_xref="ASAP:ABE-0001138" /db_xref="UniProtKB/Swiss-Prot:P77541" /db_xref="ECOCYC:G6196" /db_xref="EcoGene:EG13601" /db_xref="GeneID:944990" /translation="MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYL SGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVK SMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTD ALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATP LFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYES INYYQYEEKLDNLFARSQVK" repeat_region 348829..349193 /note="REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences" gene 349236..350405 /gene="prpC" /locus_tag="b0333" /gene_synonym="ECK0330; JW0324; yahS; yzzD" /db_xref="ECOCYC:G6198" /db_xref="EcoGene:EG11756" /db_xref="GeneID:947528" CDS 349236..350405 /gene="prpC" /locus_tag="b0333" /gene_synonym="ECK0330; JW0324; yahS; yzzD" /EC_number="2.3.3.1" /function="putative enzyme; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0019395 - fatty acid oxidation" /note="putative citrate synthase; propionate metabolism?" /codon_start=1 /transl_table=11 /product="2-methylcitrate synthase" /protein_id="NP_414867.1" /db_xref="GI:16128318" /db_xref="ASAP:ABE-0001148" /db_xref="UniProtKB/Swiss-Prot:P31660" /db_xref="ECOCYC:G6198" /db_xref="EcoGene:EG11756" /db_xref="GeneID:947528" /translation="MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHY RGYDILDLAKHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPA ASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERI QPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSD MYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPV YTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNM MGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRPFVALDKRQ" gene 350439..351890 /gene="prpD" /locus_tag="b0334" /gene_synonym="acnC; ECK0331; JW0325; yahT" /db_xref="ECOCYC:G6199" /db_xref="EcoGene:EG13603" /db_xref="GeneID:945931" CDS 350439..351890 /gene="prpD" /locus_tag="b0334" /gene_synonym="acnC; ECK0331; JW0325; yahT" /EC_number="4.2.1.79" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="2-methylcitrate dehydratase" /protein_id="NP_414868.1" /db_xref="GI:16128319" /db_xref="ASAP:ABE-0001152" /db_xref="UniProtKB/Swiss-Prot:P77243" /db_xref="ECOCYC:G6199" /db_xref="EcoGene:EG13603" /db_xref="GeneID:945931" /translation="MSAQINNIRPEFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDT LGCGLEALEYPACKKLLGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFN DTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIAL ENSFNRVGLDHVLLVKVASTAVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTG TRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSY VMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDK KGPLNNPADRDHCIQYMVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFT ADYHDPEKRAIANAITLEFTDGTRFEEVVVEYPIGHARRRQDGIPKLVDKFKINLARQ FPTRQQQRILEVSLDRARLEQMPVNEYLDLYVI" gene 351930..353816 /gene="prpE" /locus_tag="b0335" /gene_synonym="ECK0332; JW0326; yahU" /db_xref="ECOCYC:G6200" /db_xref="EcoGene:EG13604" /db_xref="GeneID:946891" CDS 351930..353816 /gene="prpE" /locus_tag="b0335" /gene_synonym="ECK0332; JW0326; yahU" /function="putative enzyme; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0019395 - fatty acid oxidation" /note="putative propionyl-CoA synthetase" /codon_start=1 /transl_table=11 /product="propionate--CoA ligase" /protein_id="NP_414869.1" /db_xref="GI:16128320" /db_xref="ASAP:ABE-0001154" /db_xref="UniProtKB/Swiss-Prot:P77495" /db_xref="ECOCYC:G6200" /db_xref="EcoGene:EG13604" /db_xref="GeneID:946891" /translation="MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFAR WFCEGRTNLCHNAIDRWLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRS LGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIV SADAGARGGKIIPYKKLLDDAISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRHQ HIGARVPVAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGSV FFCASDIGWVVGHSYIVYAPLLAGMATIVYEGLPTWPDCGVWWTIVEKYQVSRMFSAP TAIRVLKKFPTAEIRKHDLSSLEVLYLAGEPLDEPTASWVSNTLDVPVIDNYWQTESG WPIMAIARGLDDRPTRLGSPGVPMYGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGC IQTIWGDDGRFVKTYWSLFSRPVYATFDWGIRDADGYHFILGRTDDVINVAGHRLGTR EIEESISSHPGVAEVAVVGVKDALKGQVAVAFVIPKESDSLEDRDVAHSQEKAIMALV DSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLDQIRQ AMEE" repeat_region 353823..353993 /note="REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene 354146..355405 /gene="codB" /locus_tag="b0336" /gene_synonym="ECK0333; JW0327" /db_xref="ECOCYC:EG11327" /db_xref="EcoGene:EG11327" /db_xref="GeneID:944994" CDS 354146..355405 /gene="codB" /locus_tag="b0336" /gene_synonym="ECK0333; JW0327" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /note="cytosine permease/transport" /codon_start=1 /transl_table=11 /product="cytosine transporter" /protein_id="NP_414870.1" /db_xref="GI:16128321" /db_xref="ASAP:ABE-0001159" /db_xref="UniProtKB/Swiss-Prot:P0AA82" /db_xref="ECOCYC:EG11327" /db_xref="EcoGene:EG11327" /db_xref="GeneID:944994" /translation="MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLG TGLSYHDFFLAVLIGNLLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLG GTQVGWFGVGVAMFAIPVGKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPA IACLGGYSVWLAVNGMGGLDALKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFG RNAKLAVLVAMVAFFLGNSLMFIFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNI WTTNDNALYASGLGFANITGMSSKTLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPP VGGVIIADYLMNRRRYEHFATTRMMSVNWVAILAVALGIAAGHWLPGIVPVNAVLGGA LSYLILNPILNRKTTAAMTHVEANSVE" gene 355395..356678 /gene="codA" /locus_tag="b0337" /gene_synonym="ECK0334; JW0328" /db_xref="ECOCYC:EG11326" /db_xref="EcoGene:EG11326" /db_xref="GeneID:944996" CDS 355395..356678 /gene="codA" /locus_tag="b0337" /gene_synonym="ECK0334; JW0328" /EC_number="3.5.4.1" /function="enzyme; Salvage of nucleosides and nucleotides" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="cytosine deaminase" /protein_id="NP_414871.1" /db_xref="GI:16128322" /db_xref="ASAP:ABE-0001161" /db_xref="UniProtKB/Swiss-Prot:P25524" /db_xref="ECOCYC:EG11326" /db_xref="EcoGene:EG11326" /db_xref="GeneID:944996" /translation="MSNNALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITE NSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVK QRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGI LSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDE IDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVAN PLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHM GLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQ VPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR" mat_peptide 355398..356675 /gene="codA" /locus_tag="b0337" /gene_synonym="ECK0334; JW0328" /product="cytosine deaminase" /experiment="N-terminus verified by Edman degradation: PMID 1640834" repeat_region 356708..356786 /note="REP27 (repetitive extragenic palindromic) element; contains 2 REP sequences" repeat_region 356908..356986 /note="REP28 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(357015..357914) /gene="cynR" /locus_tag="b0338" /gene_synonym="ECK0335; JW5894" /db_xref="ECOCYC:EG11421" /db_xref="EcoGene:EG11421" /db_xref="GeneID:945001" CDS complement(357015..357914) /gene="cynR" /locus_tag="b0338" /gene_synonym="ECK0335; JW5894" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription; GO:0006805 - xenobiotic metabolic process" /note="cyn operon positive regulator" /codon_start=1 /transl_table=11 /product="transcriptional activator of cyn operon; autorepressor" /protein_id="NP_414872.3" /db_xref="GI:157783149" /db_xref="ASAP:ABE-0001165" /db_xref="UniProtKB/Swiss-Prot:P27111" /db_xref="ECOCYC:EG11421" /db_xref="EcoGene:EG11421" /db_xref="GeneID:945001" /translation="MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLG VPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFT SYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPL LTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVV IEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQT AAAKAFLHMALDKCAVVGGNESR" gene 358023..358682 /gene="cynT" /locus_tag="b0339" /gene_synonym="ECK0336; JW0330" /db_xref="ECOCYC:EG10176" /db_xref="EcoGene:EG10176" /db_xref="GeneID:946548" CDS 358023..358682 /gene="cynT" /locus_tag="b0339" /gene_synonym="ECK0336; JW0330" /EC_number="4.2.1.1" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 1740425" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009440 - cyanate catabolic process; GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="NP_414873.1" /db_xref="GI:16128324" /db_xref="ASAP:ABE-0001171" /db_xref="UniProtKB/Swiss-Prot:P0ABE9" /db_xref="ECOCYC:EG10176" /db_xref="EcoGene:EG10176" /db_xref="GeneID:946548" /translation="MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRL VPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCG AMTAIASCQCMDHMPAVSHWLRYADSARVVNEARPHSDLPSKAAAMVRENVIAQLANL QTHPSVRLALEEGRIALHGWVYDIESGSIAAFDGATRQFVPLAANPRVCAIPLRQPTA A" gene 358713..359183 /gene="cynS" /locus_tag="b0340" /gene_synonym="cnt; ECK0337; JW0331" /db_xref="ECOCYC:EG10175" /db_xref="EcoGene:EG10175" /db_xref="GeneID:948998" CDS 358713..359183 /gene="cynS" /locus_tag="b0340" /gene_synonym="cnt; ECK0337; JW0331" /EC_number="4.2.1.104" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 6336748" /GO_process="GO:0009440 - cyanate catabolic process; GO:0006807 - nitrogen compound metabolic process; GO:0006805 - xenobiotic metabolic process" /note="cyanate aminohydrolase, cyanase" /codon_start=1 /transl_table=11 /product="cyanate aminohydrolase" /protein_id="NP_414874.1" /db_xref="GI:16128325" /db_xref="ASAP:ABE-0001173" /db_xref="UniProtKB/Swiss-Prot:P00816" /db_xref="ECOCYC:EG10175" /db_xref="EcoGene:EG10175" /db_xref="GeneID:948998" /translation="MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVT AALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQ VYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF" gene 359216..360370 /gene="cynX" /locus_tag="b0341" /gene_synonym="ECK0338; JW0332" /db_xref="ECOCYC:EG10177" /db_xref="EcoGene:EG10177" /db_xref="GeneID:946770" CDS 359216..360370 /gene="cynX" /locus_tag="b0341" /gene_synonym="ECK0338; JW0332" /function="transport; Transport of small molecules: Anions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009440 - cyanate catabolic process; GO:0006805 - xenobiotic metabolic process" /note="cyanate transport" /codon_start=1 /transl_table=11 /product="predicted cyanate transporter" /protein_id="NP_414875.1" /db_xref="GI:16128326" /db_xref="ASAP:ABE-0001175" /db_xref="UniProtKB/Swiss-Prot:P17583" /db_xref="ECOCYC:EG10177" /db_xref="EcoGene:EG10177" /db_xref="GeneID:946770" /translation="MLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALP VVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGI GIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWW ALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAW LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFC GFIWLPMQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAG LAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPVRFPQLWVKEA" repeat_region 360432..360460 /note="REP29 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(360473..361084) /gene="lacA" /locus_tag="b0342" /gene_synonym="ECK0339; JW0333" /db_xref="ECOCYC:EG10524" /db_xref="EcoGene:EG10524" /db_xref="GeneID:945674" CDS complement(360473..361084) /gene="lacA" /locus_tag="b0342" /gene_synonym="ECK0339; JW0333" /EC_number="2.3.1.18" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 3922433" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="thiogalactoside acetyltransferase" /protein_id="NP_414876.1" /db_xref="GI:16128327" /db_xref="ASAP:ABE-0001177" /db_xref="UniProtKB/Swiss-Prot:P07464" /db_xref="ECOCYC:EG10524" /db_xref="EcoGene:EG10524" /db_xref="GeneID:945674" /translation="MNMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEV EKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNV LIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGA GSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFKDYKVESSV" repeat_region 361107..361140 /note="REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(361150..362403) /gene="lacY" /locus_tag="b0343" /gene_synonym="ECK0340; JW0334" /db_xref="ECOCYC:EG10526" /db_xref="EcoGene:EG10526" /db_xref="GeneID:949083" CDS complement(361150..362403) /gene="lacY" /locus_tag="b0343" /gene_synonym="ECK0340; JW0334" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /function="1.1.1 metabolism; carbon utilization; carbon compounds" /function="4.2.A.1 transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Major Facilitator Superfamily (MFS)" /function="6.1 cell structure; membrane" /function="7.3 location of gene products; inner membrane" /function="4.S.99 transport; substrate; lactose" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="galactoside permease (lactose permease, M protein) (MFS family)" /codon_start=1 /transl_table=11 /product="lactose permease" /protein_id="NP_414877.1" /db_xref="GI:16128328" /db_xref="ASAP:ABE-0001181" /db_xref="UniProtKB/Swiss-Prot:P02920" /db_xref="ECOCYC:EG10526" /db_xref="EcoGene:EG10526" /db_xref="GeneID:949083" /translation="MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSD TGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYN ILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGI MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFR QPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM FFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCF KYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGF TLISVFTLSGPGPLSLLRRQVNEVA" gene complement(362455..365529) /gene="lacZ" /locus_tag="b0344" /gene_synonym="ECK0341; JW0335" /db_xref="ECOCYC:EG10527" /db_xref="EcoGene:EG10527" /db_xref="GeneID:945006" CDS complement(362455..365529) /gene="lacZ" /locus_tag="b0344" /gene_synonym="ECK0341; JW0335" /EC_number="3.2.1.23" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="beta-D-galactosidase" /protein_id="NP_414878.1" /db_xref="GI:16128329" /db_xref="ASAP:ABE-0001183" /db_xref="UniProtKB/Swiss-Prot:P00722" /db_xref="ECOCYC:EG10527" /db_xref="EcoGene:EG10527" /db_xref="GeneID:945006" /translation="MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR TDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYT NVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWV GYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHK PTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFG GEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFR EVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSH YPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRN HPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVD EDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGG FVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQ QQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIE LPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPH LTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSE ATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKT YRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAA CFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETS HRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK" mat_peptide complement(362458..365526) /gene="lacZ" /locus_tag="b0344" /gene_synonym="ECK0341; JW0335" /product="beta-D-galactosidase" /experiment="N-terminus verified by Edman degradation: PMID 97295,97298" gene complement(365652..366734) /gene="lacI" /locus_tag="b0345" /gene_synonym="ECK0342; JW0336" /db_xref="ECOCYC:EG10525" /db_xref="EcoGene:EG10525" /db_xref="GeneID:945007" CDS complement(365652..366734) /gene="lacI" /locus_tag="b0345" /gene_synonym="ECK0342; JW0336" /function="regulator; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 1107032,4554534,4557395,4571224" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0006350 - transcription" /note="transcriptional repressor of the lac operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor" /protein_id="NP_414879.3" /db_xref="GI:49176012" /db_xref="ASAP:ABE-0001189" /db_xref="UniProtKB/Swiss-Prot:P03023" /db_xref="ECOCYC:EG10525" /db_xref="EcoGene:EG10525" /db_xref="GeneID:945007" /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAE LNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERS GVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSII FSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREG DWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDT EDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNT QTASPRALADSLMQLARQVSRLESGQ" gene complement(366811..367644) /gene="mhpR" /locus_tag="b0346" /gene_synonym="ECK0343; JW0337" /db_xref="ECOCYC:G6201" /db_xref="EcoGene:EG20276" /db_xref="GeneID:945938" CDS complement(366811..367644) /gene="mhpR" /locus_tag="b0346" /gene_synonym="ECK0343; JW0337" /function="regulator; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 12748194" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0019395 - fatty acid oxidation; GO:0006350 - transcription" /note="transcriptional regulator for mhp operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator, 3HPP-binding" /protein_id="NP_414880.2" /db_xref="GI:145698223" /db_xref="ASAP:ABE-0001191" /db_xref="UniProtKB/Swiss-Prot:P77569" /db_xref="ECOCYC:G6201" /db_xref="EcoGene:EG20276" /db_xref="GeneID:945938" /translation="MQNNEQTEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLH RTTVRRLLETLQEEGYVRRSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLR EVVWPTDVSTLDVDAMVVRETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQD RKELIEMLASRPGDDYQLAREPLKLEAILARARKEGYGQNYRGWDQEEKIASIAVPLR SEQRVIGCLNLVYMASAMTIEQAAEKHLPALQRVAKQIEEGVESQAILVAGRRSGMHL R" gene 367835..369499 /gene="mhpA" /locus_tag="b0347" /gene_synonym="ECK0344; JW0338" /db_xref="ECOCYC:M010" /db_xref="EcoGene:EG20273" /db_xref="GeneID:945197" CDS 367835..369499 /gene="mhpA" /locus_tag="b0347" /gene_synonym="ECK0344; JW0338" /EC_number="1.14.13.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_process="GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="3-(3-hydroxyphenyl)propionate hydroxylase" /protein_id="NP_414881.1" /db_xref="GI:16128332" /db_xref="ASAP:ABE-0001196" /db_xref="UniProtKB/Swiss-Prot:P77397" /db_xref="ECOCYC:M010" /db_xref="EcoGene:EG20273" /db_xref="GeneID:945197" /translation="MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVV EKLDKLIDYPRAIGIDDEALRTMQSVGLVDDVLPHTTPWHAMRFLTPKGRCFADIQPM TDEFGWPRRNAFIQPQVDAVMLEGVSRFPNVRCLFSRELEAFSQQDDEVTLHLKTAEG QREIVKAQWLVACDGGASFVRRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDP VRPYVSAALPHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYT HNARLAQRFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVIQGKARDAL LDTYQQERRDHAKAMIDLSVTAGNVLAPPKRWQGTLRDGVSWLLNYLPPVKRYFLEMR FKPMPQYYGGALMREGEAKHSPVGKMFIQPKVTLENGDVTLLDNAIGANFAVIGWGCN PLWGMSDEQIQQWRALGTRFIQVVPEVQIHTAQDNHDGVLRVGDTQGRLRSWFAQHNA SLVVMRPDRFVAATAIPQTLGKTLNKLASVMTLTRPDADVSVEKVA" gene 369501..370445 /gene="mhpB" /locus_tag="b0348" /gene_synonym="ECK0345; JW0339" /db_xref="ECOCYC:M011" /db_xref="EcoGene:EG20274" /db_xref="GeneID:945047" CDS 369501..370445 /gene="mhpB" /locus_tag="b0348" /gene_synonym="ECK0345; JW0339" /EC_number="1.13.11.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8399388" /GO_process="GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="2,3-dihydroxyphenylpropionate 1,2-dioxygenase" /protein_id="NP_414882.1" /db_xref="GI:16128333" /db_xref="ASAP:ABE-0001198" /db_xref="UniProtKB/Swiss-Prot:P0ABR9" /db_xref="ECOCYC:M011" /db_xref="EcoGene:EG20274" /db_xref="GeneID:945047" /translation="MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPE LVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSG IDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGR FTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVIS AAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWV AAFAAISAFGNWRSEGRYYRPIPEWIAGFGSLSARTEN" gene 370448..371329 /gene="mhpC" /locus_tag="b0349" /gene_synonym="ECK0346; JW0340" /db_xref="ECOCYC:M012" /db_xref="EcoGene:EG20275" /db_xref="GeneID:944954" CDS 370448..371329 /gene="mhpC" /locus_tag="b0349" /gene_synonym="ECK0346; JW0340" /EC_number="3.7.1.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_process="GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase" /protein_id="NP_414883.4" /db_xref="GI:90111115" /db_xref="ASAP:ABE-0001201" /db_xref="UniProtKB/Swiss-Prot:P77044" /db_xref="ECOCYC:M012" /db_xref="EcoGene:EG20275" /db_xref="GeneID:944954" /translation="MQEKMMSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETVV LLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILK SVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGI KRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEAN PKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQW EHADAFNQLVLNFLARP" gene 371339..372148 /gene="mhpD" /locus_tag="b0350" /gene_synonym="ECK0347; JW0341; mhpS" /db_xref="ECOCYC:M013" /db_xref="EcoGene:EG14274" /db_xref="GeneID:944768" CDS 371339..372148 /gene="mhpD" /locus_tag="b0350" /gene_synonym="ECK0347; JW0341; mhpS" /EC_number="4.2.1.80" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_process="GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="2-keto-4-pentenoate hydratase" /protein_id="NP_414884.2" /db_xref="GI:90111116" /db_xref="ASAP:ABE-0001205" /db_xref="UniProtKB/Swiss-Prot:P77608" /db_xref="ECOCYC:M013" /db_xref="EcoGene:EG14274" /db_xref="GeneID:944768" /translation="MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHI NVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQP RIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNAS CGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASL GEPLRTGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS" mat_peptide 371342..372145 /gene="mhpD" /locus_tag="b0350" /gene_synonym="ECK0347; JW0341; mhpS" /product="2-keto-4-pentenoate hydratase" /experiment="N-terminus verified by Edman degradation: PMID 9492273" gene 372145..373095 /gene="mhpF" /locus_tag="b0351" /gene_synonym="ECK0348; JW0342" /db_xref="ECOCYC:M014" /db_xref="EcoGene:EG13625" /db_xref="GeneID:945008" CDS 372145..373095 /gene="mhpF" /locus_tag="b0351" /gene_synonym="ECK0348; JW0342" /EC_number="1.2.1.10" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0019395 - fatty acid oxidation" /note="acetaldehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="acetaldehyde-CoA dehydrogenase II, NAD-binding" /protein_id="NP_414885.1" /db_xref="GI:16128336" /db_xref="ASAP:ABE-0001207" /db_xref="UniProtKB/Swiss-Prot:P77580" /db_xref="ECOCYC:M014" /db_xref="EcoGene:EG13625" /db_xref="GeneID:945008" /translation="MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGL ARARRMGVATTHEGVIGLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDL TPAAIGPYCVPVVNLEANVDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIAS KSAGPGTRANIDEFTETTSRAIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEAS QDDIEASINEMAEAVQAYVPGYRLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEV EGAAHYLPAYAGNLDIMTSSALATAEKMAQSLARKAGEAA" gene 373092..374105 /gene="mhpE" /locus_tag="b0352" /gene_synonym="ECK0349; JW0343" /db_xref="ECOCYC:G6205" /db_xref="EcoGene:EG13292" /db_xref="GeneID:945012" CDS 373092..374105 /gene="mhpE" /locus_tag="b0352" /gene_synonym="ECK0349; JW0343" /EC_number="4.1.3.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_process="GO:0019395 - fatty acid oxidation" /note="4-hydroxy-2-ketovalerate aldolase" /codon_start=1 /transl_table=11 /product="4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I" /protein_id="NP_414886.1" /db_xref="GI:16128337" /db_xref="ASAP:ABE-0001209" /db_xref="UniProtKB/Swiss-Prot:P51020" /db_xref="ECOCYC:G6205" /db_xref="EcoGene:EG13292" /db_xref="GeneID:945012" /translation="MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSI EVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQA GARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGA TCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCD RIDASLAGMGAGAGNAPLEVFIAAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVD RETLALGYAGVYSSFLRHCETAAARYGLSAVDILVELGKRRMVGGQEDMIVDVALDLR NNK" repeat_region 374154..374589 /note="REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences" gene 374683..375894 /gene="mhpT" /locus_tag="b0353" /gene_synonym="ECK0350; JW5046; yaiK" /db_xref="ECOCYC:G6206" /db_xref="EcoGene:EG13293" /db_xref="GeneID:944997" CDS 374683..375894 /gene="mhpT" /locus_tag="b0353" /gene_synonym="ECK0350; JW5046; yaiK" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0019395 - fatty acid oxidation" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicted 3-hydroxyphenylpropionic transporter" /protein_id="NP_414887.2" /db_xref="GI:90111117" /db_xref="ASAP:ABE-0001213" /db_xref="UniProtKB/Swiss-Prot:P77589" /db_xref="ECOCYC:G6206" /db_xref="EcoGene:EG13293" /db_xref="GeneID:944997" /translation="MSTRTPSSSSSRLMLTIGLCFLVALMEGLDLQAAGIAAGGIAQA FALDKMQMGWIFSAGILGLLPGALVGGMLADRYGRKRILIGSVALFGLFSLATAIAWD FPSLVFARLMTGVGLGAALPNLIALTSEAAGPRFRGTAVSLMYCGVPIGAALAATLGF AGANLAWQTVFWVGGVVPLILVPLLMRWLPESAVFAGEKQSAPPLRALFAPETATATL LLWLCYFFTLLVVYMLINWLPLLLVEQGFQPSQAAGVMFALQMGAASGTLMLGALMDK LRPVTMSLLIYSGMLASLLALGTVSSFNGMLLAGFVAGLFATGGQSVLYALAPLFYSS QIRATGVGTAVAVGRLGAMSGPLLAGKMLALGTGTVGVMAASAPGILVAGLAVFILMS RRSRIQPCADA" gene 375996..376535 /gene="yaiL" /locus_tag="b0354" /gene_synonym="ECK0351; JW0345" /db_xref="ECOCYC:G6207" /db_xref="EcoGene:EG13294" /db_xref="GeneID:944993" CDS 375996..376535 /gene="yaiL" /locus_tag="b0354" /gene_synonym="ECK0351; JW0345" /function="putative enzyme; Not classified" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414888.4" /db_xref="GI:90111118" /db_xref="ASAP:ABE-0001216" /db_xref="UniProtKB/Swiss-Prot:P51024" /db_xref="ECOCYC:G6207" /db_xref="EcoGene:EG13294" /db_xref="GeneID:944993" /translation="MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEE NKKAQLERDKQLSEQQKQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKI FVDKLTQAQLINGRLAIARLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAE EQDEDDPYADFKVPDDLMW" repeat_region 376559..376745 /note="REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(376759..377592) /gene="frmB" /locus_tag="b0355" /gene_synonym="ECK0352; JW0346; yaiM" /db_xref="ECOCYC:G6208" /db_xref="EcoGene:EG13295" /db_xref="GeneID:944991" CDS complement(376759..377592) /gene="frmB" /locus_tag="b0355" /gene_synonym="ECK0352; JW0346; yaiM" /function="enzyme: Formaldehyde degradation" /note="putative S-formylglutathione hydrolase" /codon_start=1 /transl_table=11 /product="S-formylglutathione hydrolase" /protein_id="NP_414889.1" /db_xref="GI:16128340" /db_xref="ASAP:ABE-0001219" /db_xref="UniProtKB/Swiss-Prot:P51025" /db_xref="ECOCYC:G6208" /db_xref="EcoGene:EG13295" /db_xref="GeneID:944991" /translation="MELIEKHVSFGGWQNMYRHYSQSLKCEMNVGVYLPPKAANEKLP VLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGF YLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPD EYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQG LSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNM R" gene complement(377686..378795) /gene="frmA" /locus_tag="b0356" /gene_synonym="adhC; ECK0353; JW0347" /db_xref="ECOCYC:EG50010" /db_xref="EcoGene:EG50010" /db_xref="GeneID:944988" CDS complement(377686..378795) /gene="frmA" /locus_tag="b0356" /gene_synonym="adhC; ECK0353; JW0347" /EC_number="1.1.1.1" /EC_number="1.1.1.284" /function="enzyme; Energy metabolism, carbon: Fermentation" /experiment="N-terminus verified by Edman degradation: PMID 1731906" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006113 - fermentation" /note="alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase" /protein_id="NP_414890.1" /db_xref="GI:16128341" /db_xref="ASAP:ABE-0001221" /db_xref="UniProtKB/Swiss-Prot:P25437" /db_xref="ECOCYC:EG50010" /db_xref="EcoGene:EG50010" /db_xref="GeneID:944988" /translation="MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDA FTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGK TNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEAN HEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID TNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALES AHRGWGQSVIIGVAVAGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGD IDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIRY" gene complement(378830..379105) /gene="frmR" /locus_tag="b0357" /gene_synonym="ECK0354; JW0348; yaiN" /db_xref="ECOCYC:G6209" /db_xref="EcoGene:EG13296" /db_xref="GeneID:944986" CDS complement(378830..379105) /gene="frmR" /locus_tag="b0357" /gene_synonym="ECK0354; JW0348; yaiN" /note="repressor of frmRAB" /codon_start=1 /transl_table=11 /product="regulator protein that represses frmRAB operon" /protein_id="NP_414891.4" /db_xref="GI:162135894" /db_xref="ASAP:ABE-0001226" /db_xref="UniProtKB/Swiss-Prot:P0AAP3" /db_xref="ECOCYC:G6209" /db_xref="EcoGene:EG13296" /db_xref="GeneID:944986" /translation="MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAA VRGAANGLMAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK" gene complement(379293..380066) /gene="yaiO" /locus_tag="b0358" /gene_synonym="ECK0355; JW0349" /db_xref="ECOCYC:G6210" /db_xref="EcoGene:EG13297" /db_xref="GeneID:945014" CDS complement(379293..380066) /gene="yaiO" /locus_tag="b0358" /gene_synonym="ECK0355; JW0349" /codon_start=1 /transl_table=11 /product="outer membrane protein" /protein_id="NP_414892.1" /db_xref="GI:16128343" /db_xref="ASAP:ABE-0001230" /db_xref="UniProtKB/Swiss-Prot:Q47534" /db_xref="ECOCYC:G6210" /db_xref="EcoGene:EG13297" /db_xref="GeneID:945014" /translation="MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAY AELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTP VFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTH YDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQR IQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF" gene complement(join(380068..380483,381815..382096)) /gene="yaiX" /locus_tag="b4579" /old_locus_tag="b0359" /old_locus_tag="b0362" /gene_synonym="ECK0356; JW0350; yaiF" /pseudo /db_xref="EcoGene:EG14236" /db_xref="GeneID:4056039" CDS complement(join(380068..380483,381815..382096)) /gene="yaiX" /locus_tag="b4579" /old_locus_tag="b0359" /old_locus_tag="b0362" /gene_synonym="ECK0356; JW0350; yaiF" /note="pseudogene, interrupted by IS2A, acetyltransferase homolog; putative transferase; nonfunctional; interruped by IS2" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001232" /db_xref="ASAP:ABE-0001241" /db_xref="ASAP:ABE-0285111" /db_xref="EcoGene:EG14236" /db_xref="GeneID:4056039" repeat_region 380484..381814 /mobile_element="insertion sequence:IS2A" gene 380575..380940 /gene="insC" /locus_tag="b0360" /gene_synonym="ECK0357" /db_xref="ECOCYC:G6212" /db_xref="EcoGene:EG40003" /db_xref="GeneID:945025" CDS 380575..380940 /gene="insC" /locus_tag="b0360" /gene_synonym="ECK0357" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 repressor TnpA" /protein_id="NP_414894.2" /db_xref="GI:145698224" /db_xref="ASAP:ABE-0001237" /db_xref="ECOCYC:G6212" /db_xref="EcoGene:EG40003" /db_xref="GeneID:945025" /translation="MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAAS QLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVE YGRAKKWIAHAPLLPGDGE" gene 380898..381803 /gene="insD" /locus_tag="b0361" /gene_synonym="ECK0358" /db_xref="ECOCYC:G6213" /db_xref="EcoGene:EG40004" /db_xref="GeneID:945203" CDS 380898..381803 /gene="insD" /locus_tag="b0361" /gene_synonym="ECK0358" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 transposase TnpB" /protein_id="NP_414895.1" /db_xref="GI:16128346" /db_xref="ASAP:ABE-0001239" /db_xref="ECOCYC:G6213" /db_xref="EcoGene:EG40004" /db_xref="GeneID:945203" /translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL GYRSPREYLRQRACNGLSDNRCLEI" gene complement(381963..383159) /gene="yaiP" /locus_tag="b0363" /gene_synonym="ECK0360; JW0355" /db_xref="ECOCYC:G6215" /db_xref="EcoGene:EG13298" /db_xref="GeneID:945308" CDS complement(381963..383159) /gene="yaiP" /locus_tag="b0363" /gene_synonym="ECK0360; JW0355" /function="putative enzyme; Not classified" /GO_process="GO:0000271 - polysaccharide biosynthetic process" /note="polysaccharide metabolism" /codon_start=1 /transl_table=11 /product="predicted glucosyltransferase" /protein_id="NP_414897.1" /db_xref="GI:16128348" /db_xref="ASAP:ABE-0001243" /db_xref="UniProtKB/Swiss-Prot:Q47536" /db_xref="ECOCYC:G6215" /db_xref="EcoGene:EG13298" /db_xref="GeneID:945308" /translation="MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPC LAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALM NGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHI RATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTL VANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIF PMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLL VPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGT EKLSEA" gene complement(383283..383840) /gene="yaiS" /locus_tag="b0364" /gene_synonym="ECK0361; JW0356" /db_xref="ECOCYC:G6216" /db_xref="EcoGene:EG13302" /db_xref="GeneID:946967" CDS complement(383283..383840) /gene="yaiS" /locus_tag="b0364" /gene_synonym="ECK0361; JW0356" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414898.4" /db_xref="GI:90111121" /db_xref="ASAP:ABE-0001249" /db_xref="UniProtKB/Swiss-Prot:P71311" /db_xref="ECOCYC:G6216" /db_xref="EcoGene:EG13302" /db_xref="GeneID:946967" /translation="MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKG IYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISAL EDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSF MPQVFESVKEEYFTVKLAALKKHKS" gene 384456..385418 /gene="tauA" /locus_tag="b0365" /gene_synonym="ECK0362; JW0357; ssiA; yaiR" /db_xref="ECOCYC:G6217" /db_xref="EcoGene:EG13300" /db_xref="GeneID:945030" CDS 384456..385418 /gene="tauA" /locus_tag="b0365" /gene_synonym="ECK0362; JW0357; ssiA; yaiR" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009310 - amine catabolic process; GO:0006790 - sulfur metabolic process" /note="taurine transport system periplasmic protein" /codon_start=1 /transl_table=11 /product="taurine transporter subunit" /protein_id="NP_414899.2" /db_xref="GI:90111122" /db_xref="ASAP:ABE-0001256" /db_xref="UniProtKB/Swiss-Prot:Q47537" /db_xref="ECOCYC:G6217" /db_xref="EcoGene:EG13300" /db_xref="GeneID:945030" /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNT FAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKL GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPA IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHP EVVKAFAKSAIDAQQPYIANPDVWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ QQTAELTGPVNKAIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ" mat_peptide 384522..385415 /gene="tauA" /locus_tag="b0365" /gene_synonym="ECK0362; JW0357; ssiA; yaiR" /product="taurine transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 8774726" gene 385431..386198 /gene="tauB" /locus_tag="b0366" /gene_synonym="ECK0363; JW0358; ssiB; yaiQ" /db_xref="ECOCYC:G6218" /db_xref="EcoGene:EG13299" /db_xref="GeneID:945027" CDS 385431..386198 /gene="tauB" /locus_tag="b0366" /gene_synonym="ECK0363; JW0358; ssiB; yaiQ" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009310 - amine catabolic process; GO:0006790 - sulfur metabolic process" /note="taurine ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="taurine transporter subunit" /protein_id="NP_414900.1" /db_xref="GI:16128351" /db_xref="ASAP:ABE-0001259" /db_xref="UniProtKB/Swiss-Prot:Q47538" /db_xref="ECOCYC:G6218" /db_xref="EcoGene:EG13299" /db_xref="GeneID:945027" /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK MQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS" gene 386195..387022 /gene="tauC" /locus_tag="b0367" /gene_synonym="ECK0364; JW0359; ssiC; yaiJ" /db_xref="ECOCYC:G6219" /db_xref="EcoGene:EG13301" /db_xref="GeneID:945026" CDS 386195..387022 /gene="tauC" /locus_tag="b0367" /gene_synonym="ECK0364; JW0359; ssiC; yaiJ" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009310 - amine catabolic process; GO:0006790 - sulfur metabolic process" /note="taurine transport system permease protein" /codon_start=1 /transl_table=11 /product="taurine transporter subunit" /protein_id="NP_414901.1" /db_xref="GI:16128352" /db_xref="ASAP:ABE-0001261" /db_xref="UniProtKB/Swiss-Prot:Q47539" /db_xref="ECOCYC:G6219" /db_xref="EcoGene:EG13301" /db_xref="GeneID:945026" /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATL QLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALFAAVLFGIPVG IAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS ALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ" gene 387019..387870 /gene="tauD" /locus_tag="b0368" /gene_synonym="ECK0365; JW0360; ssiD; yaiG" /db_xref="ECOCYC:EG12423" /db_xref="EcoGene:EG12423" /db_xref="GeneID:945021" CDS 387019..387870 /gene="tauD" /locus_tag="b0368" /gene_synonym="ECK0365; JW0360; ssiD; yaiG" /EC_number="1.14.11.17" /function="putative enzyme; Not classified" /GO_process="GO:0009310 - amine catabolic process; GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="taurine dioxygenase, 2-oxoglutarate-dependent" /protein_id="NP_414902.1" /db_xref="GI:16128353" /db_xref="ASAP:ABE-0001263" /db_xref="UniProtKB/Swiss-Prot:P37610" /db_xref="ECOCYC:EG12423" /db_xref="EcoGene:EG12423" /db_xref="GeneID:945021" /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFP EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES EALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGD KPFYRAG" mat_peptide 387022..387867 /gene="tauD" /locus_tag="b0368" /gene_synonym="ECK0365; JW0360; ssiD; yaiG" /product="taurine dioxygenase, 2-oxoglutarate-dependent" /experiment="N-terminus verified by Edman degradation: PMID 8774726" gene complement(387977..388951) /gene="hemB" /locus_tag="b0369" /gene_synonym="ECK0366; JW0361; ncf" /db_xref="ECOCYC:EG10428" /db_xref="EcoGene:EG10428" /db_xref="GeneID:945017" CDS complement(387977..388951) /gene="hemB" /locus_tag="b0369" /gene_synonym="ECK0366; JW0361; ncf" /EC_number="4.2.1.24" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="5-aminolevulinate dehydratase = porphobilinogen synthase" /codon_start=1 /transl_table=11 /product="5-aminolevulinate dehydratase (porphobilinogen synthase)" /protein_id="NP_414903.4" /db_xref="GI:90111123" /db_xref="ASAP:ABE-0001266" /db_xref="UniProtKB/Swiss-Prot:P0ACB2" /db_xref="ECOCYC:EG10428" /db_xref="EcoGene:EG10428" /db_xref="GeneID:945017" /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR" mat_peptide complement(387980..388948) /gene="hemB" /locus_tag="b0369" /gene_synonym="ECK0366; JW0361; ncf" /product="5-aminolevulinate dehydratase (porphobilinogen synthase)" /experiment="N-terminus verified by Edman degradation: PMID 8439296" gene join(389475..390932,392191..393642) /gene="yaiT" /locus_tag="b4580" /old_locus_tag="b0371" /old_locus_tag="b0374" /gene_synonym="ECK0368; JW0362; yaiU" /pseudo /db_xref="EcoGene:EG13605" /db_xref="GeneID:4056040" CDS join(389475..390932,392191..393642) /gene="yaiT" /locus_tag="b4580" /old_locus_tag="b0371" /old_locus_tag="b0374" /gene_synonym="ECK0368; JW0362; yaiU" /note="predicted protein;putative structure; Not classified; putative flagellin structural protein; interrupted by IS3" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001274" /db_xref="ASAP:ABE-0001288" /db_xref="ASAP:ABE-0285112" /db_xref="UniProtKB/Swiss-Prot:P77199" /db_xref="EcoGene:EG13605" /db_xref="GeneID:4056040" repeat_region complement(390933..392190) /mobile_element="insertion sequence:IS3B" gene complement(390963..391829) /gene="insF" /locus_tag="b0372" /gene_synonym="ECK0299" /db_xref="ECOCYC:G6223" /db_xref="EcoGene:EG40006" /db_xref="GeneID:945036" CDS complement(390963..391829) /gene="insF" /locus_tag="b0372" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="NP_414906.1" /db_xref="GI:16128357" /db_xref="ASAP:ABE-0001277" /db_xref="ECOCYC:G6223" /db_xref="EcoGene:EG40006" /db_xref="GeneID:945036" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(391826..392125) /gene="insE" /locus_tag="b0373" /gene_synonym="ECK0298" /db_xref="ECOCYC:G6224" /db_xref="EcoGene:EG40005" /db_xref="GeneID:946900" CDS complement(391826..392125) /gene="insE" /locus_tag="b0373" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="NP_414907.2" /db_xref="GI:226524701" /db_xref="ASAP:ABE-0001279" /db_xref="ECOCYC:G6224" /db_xref="EcoGene:EG40005" /db_xref="GeneID:946900" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 393730..394353 /gene="yaiV" /locus_tag="b0375" /gene_synonym="ECK0370; JW0366" /db_xref="ECOCYC:G6226" /db_xref="EcoGene:EG13607" /db_xref="GeneID:946902" CDS 393730..394353 /gene="yaiV" /locus_tag="b0375" /gene_synonym="ECK0370; JW0366" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_414909.2" /db_xref="GI:226524702" /db_xref="ASAP:ABE-0001290" /db_xref="UniProtKB/Swiss-Prot:P0AAP5" /db_xref="ECOCYC:G6226" /db_xref="EcoGene:EG13607" /db_xref="GeneID:946902" /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDT FVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY" gene complement(394354..395511) /gene="ampH" /locus_tag="b0376" /gene_synonym="ECK0371; JW5052; yaiH" /db_xref="ECOCYC:EG12867" /db_xref="EcoGene:EG12867" /db_xref="GeneID:946904" CDS complement(394354..395511) /gene="ampH" /locus_tag="b0376" /gene_synonym="ECK0371; JW5052; yaiH" /EC_number="3.5.2.6" /EC_number="3.4.17.8" /function="putative enzyme; Not classified" /GO_process="GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="penicillin-binding protein" /protein_id="NP_414910.1" /db_xref="GI:16128361" /db_xref="ASAP:ABE-0001292" /db_xref="UniProtKB/Swiss-Prot:P0AD70" /db_xref="ECOCYC:EG12867" /db_xref="EcoGene:EG12867" /db_xref="GeneID:946904" /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS" gene 395863..397083 /gene="sbmA" /locus_tag="b0377" /gene_synonym="ECK0372; JW0368" /db_xref="ECOCYC:EG10928" /db_xref="EcoGene:EG10928" /db_xref="GeneID:946884" CDS 395863..397083 /gene="sbmA" /locus_tag="b0377" /gene_synonym="ECK0372; JW0368" /function="putative membrane; Drug/analog sensitivity" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="sensitivity to microcin B17, possibly envelop protein" /codon_start=1 /transl_table=11 /product="microcin B17 transporter" /protein_id="NP_414911.1" /db_xref="GI:16128362" /db_xref="ASAP:ABE-0001297" /db_xref="UniProtKB/Swiss-Prot:P0AFY6" /db_xref="ECOCYC:EG10928" /db_xref="EcoGene:EG10928" /db_xref="GeneID:946884" /translation="MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ IPISAARFWSLDFLIFYAYYIVCVGLFALFWFIYSPHRWQYWSILGTALIIFVTWFLV EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIA FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE LDGDKIQEVTHTLS" gene 397096..398190 /gene="yaiW" /locus_tag="b0378" /gene_synonym="ECK0373; JW0369" /db_xref="ECOCYC:G6227" /db_xref="EcoGene:EG13608" /db_xref="GeneID:945038" CDS 397096..398190 /gene="yaiW" /locus_tag="b0378" /gene_synonym="ECK0373; JW0369" /codon_start=1 /transl_table=11 /product="probable lipoprotein required for swarming phenotype" /protein_id="NP_414912.1" /db_xref="GI:16128363" /db_xref="ASAP:ABE-0001299" /db_xref="UniProtKB/Swiss-Prot:P77562" /db_xref="ECOCYC:G6227" /db_xref="EcoGene:EG13608" /db_xref="GeneID:945038" /translation="MSRVNPLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLINMVPM GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE LATRKLAAKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAETKTGKSLPREMLPGI QLESPKITRNLTTAWFAKRVDERRARCMKQ" repeat_region 398204..398238 /note="REP33 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(398249..398557) /gene="yaiY" /locus_tag="b0379" /gene_synonym="ECK0374; JW0370" /db_xref="ECOCYC:G6228" /db_xref="EcoGene:EG14279" /db_xref="GeneID:945223" CDS complement(398249..398557) /gene="yaiY" /locus_tag="b0379" /gene_synonym="ECK0374; JW0370" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF2755 family" /protein_id="NP_414913.1" /db_xref="GI:16128364" /db_xref="ASAP:ABE-0001302" /db_xref="UniProtKB/Swiss-Prot:P0AAP7" /db_xref="ECOCYC:G6228" /db_xref="EcoGene:EG14279" /db_xref="GeneID:945223" /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ" gene 398817..399029 /gene="yaiZ" /locus_tag="b0380" /gene_synonym="ECK0375; JW5053" /db_xref="ECOCYC:G6229" /db_xref="EcoGene:EG14280" /db_xref="GeneID:947355" CDS 398817..399029 /gene="yaiZ" /locus_tag="b0380" /gene_synonym="ECK0375; JW5053" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein, DUF2754 family" /protein_id="NP_414914.2" /db_xref="GI:90111125" /db_xref="ASAP:ABE-0001307" /db_xref="UniProtKB/Swiss-Prot:P0AAQ0" /db_xref="ECOCYC:G6229" /db_xref="EcoGene:EG14280" /db_xref="GeneID:947355" /translation="MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVG LVTWVISFWLAGLIIRRRDEETENAQ" gene complement(399053..400147) /gene="ddlA" /locus_tag="b0381" /gene_synonym="ECK0376; JW0372" /db_xref="ECOCYC:EG10213" /db_xref="EcoGene:EG10213" /db_xref="GeneID:945313" CDS complement(399053..400147) /gene="ddlA" /locus_tag="b0381" /gene_synonym="ECK0376; JW0372" /EC_number="6.3.2.4" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="D-alanine-D-alanine ligase A" /protein_id="NP_414915.1" /db_xref="GI:16128366" /db_xref="ASAP:ABE-0001309" /db_xref="UniProtKB/Swiss-Prot:P0A6J8" /db_xref="ECOCYC:EG10213" /db_xref="EcoGene:EG10213" /db_xref="GeneID:945313" /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVI FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT LTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA SGLGYTDLITRLIELALERHAADNALKTTM" gene 400610..400870 /gene="iraP" /locus_tag="b0382" /gene_synonym="ECK0377; JW0373; yaiB" /db_xref="ECOCYC:EG11256" /db_xref="EcoGene:EG11256" /db_xref="GeneID:947709" CDS 400610..400870 /gene="iraP" /locus_tag="b0382" /gene_synonym="ECK0377; JW0373; yaiB" /codon_start=1 /transl_table=11 /product="anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein" /protein_id="NP_414916.1" /db_xref="GI:16128367" /db_xref="ASAP:ABE-0001313" /db_xref="UniProtKB/Swiss-Prot:P0AAN9" /db_xref="ECOCYC:EG11256" /db_xref="EcoGene:EG11256" /db_xref="GeneID:947709" /translation="MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND QQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ" gene 400971..402386 /gene="phoA" /locus_tag="b0383" /gene_synonym="ECK0378; JW0374; psiA" /db_xref="ECOCYC:EG10727" /db_xref="EcoGene:EG10727" /db_xref="GeneID:945041" CDS 400971..402386 /gene="phoA" /locus_tag="b0383" /gene_synonym="ECK0378; JW0374; psiA" /EC_number="3.1.3.1" /function="enzyme; Central intermediary metabolism: Phosphorus compounds" /function="1.8.1 metabolism; metabolism of other compounds; phosphorous metabolism" /function="7.2 location of gene products; periplasmic space" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006793 - phosphorus metabolic process" /note="alkaline phosphatase; start codon corrected" /codon_start=1 /transl_table=11 /product="bacterial alkaline phosphatase" /protein_id="NP_414917.2" /db_xref="GI:49176017" /db_xref="ASAP:ABE-0001328" /db_xref="UniProtKB/Swiss-Prot:P00634" /db_xref="ECOCYC:EG10727" /db_xref="EcoGene:EG10727" /db_xref="GeneID:945041" /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKP LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADH AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN VVGLTDQTDLFYTMKAALGLK" mat_peptide 401034..402383 /gene="phoA" /locus_tag="b0383" /gene_synonym="ECK0378; JW0374; psiA" /product="bacterial alkaline phosphatase" /experiment="N-terminus verified by Edman degradation: PMID 6273802,7022451" gene 402505..402825 /gene="psiF" /locus_tag="b0384" /gene_synonym="ECK0379; JW5054" /db_xref="ECOCYC:EG11401" /db_xref="EcoGene:EG11401" /db_xref="GeneID:945040" CDS 402505..402825 /gene="psiF" /locus_tag="b0384" /gene_synonym="ECK0379; JW5054" /function="phenotype; Central intermediary metabolism: Phosphorus compounds" /GO_process="GO:0006793 - phosphorus metabolic process; GO:0042594 - response to starvation" /note="induced by phosphate starvation" /codon_start=1 /transl_table=11 /product="conserved protein, PsiF family, pho regulon" /protein_id="NP_414918.4" /db_xref="GI:162135895" /db_xref="ASAP:ABE-0001330" /db_xref="UniProtKB/Swiss-Prot:P0AFM4" /db_xref="ECOCYC:EG11401" /db_xref="EcoGene:EG11401" /db_xref="GeneID:945040" /translation="MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL KKAA" gene 402927..404042 /gene="adrA" /locus_tag="b0385" /gene_synonym="ECK0380; JW0376; yaiC" /db_xref="ECOCYC:EG11257" /db_xref="EcoGene:EG11257" /db_xref="GeneID:945037" CDS 402927..404042 /gene="adrA" /locus_tag="b0385" /gene_synonym="ECK0380; JW0376; yaiC" /codon_start=1 /transl_table=11 /product="diguanylate cyclase for cellulose, biofilm, motility regulation" /protein_id="NP_414919.1" /db_xref="GI:16128370" /db_xref="ASAP:ABE-0001336" /db_xref="UniProtKB/Swiss-Prot:P0AAP1" /db_xref="ECOCYC:EG11257" /db_xref="EcoGene:EG11257" /db_xref="GeneID:945037" /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL TGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVG VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA" gene complement(404059..404868) /gene="proC" /locus_tag="b0386" /gene_synonym="ECK0381; JW0377; pro; Pro2" /db_xref="ECOCYC:EG10769" /db_xref="EcoGene:EG10769" /db_xref="GeneID:945034" CDS complement(404059..404868) /gene="proC" /locus_tag="b0386" /gene_synonym="ECK0381; JW0377; pro; Pro2" /EC_number="1.5.1.2" /function="enzyme; Amino acid biosynthesis: Proline" /experiment="N-terminus verified by Edman degradation: PMID 6089111" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006561 - proline biosynthetic process" /note="pyrroline-5-carboxylate reductase" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase, NAD(P)-binding" /protein_id="NP_414920.1" /db_xref="GI:16128371" /db_xref="ASAP:ABE-0001338" /db_xref="UniProtKB/Swiss-Prot:P0A9L8" /db_xref="ECOCYC:EG10769" /db_xref="EcoGene:EG10769" /db_xref="GeneID:945034" /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS" gene 404988..405446 /gene="yaiI" /locus_tag="b0387" /gene_synonym="ECK0382; JW0378" /db_xref="ECOCYC:G6230" /db_xref="EcoGene:EG13176" /db_xref="GeneID:945033" CDS 404988..405446 /gene="yaiI" /locus_tag="b0387" /gene_synonym="ECK0382; JW0378" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0178 family, downregulated by beryllium" /protein_id="NP_414921.2" /db_xref="GI:90111127" /db_xref="ASAP:ABE-0001344" /db_xref="UniProtKB/Swiss-Prot:P0A8D3" /db_xref="ECOCYC:G6230" /db_xref="EcoGene:EG13176" /db_xref="GeneID:945033" /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG" gene 405629..406153 /gene="aroL" /locus_tag="b0388" /gene_synonym="ECK0383; JW0379" /db_xref="ECOCYC:EG10082" /db_xref="EcoGene:EG10082" /db_xref="GeneID:945031" CDS 405629..406153 /gene="aroL" /locus_tag="b0388" /gene_synonym="ECK0383; JW0379" /EC_number="2.7.1.71" /function="enzyme; Amino acid biosynthesis: Chorismate" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="shikimate kinase II" /protein_id="NP_414922.1" /db_xref="GI:16128373" /db_xref="ASAP:ABE-0001353" /db_xref="UniProtKB/Swiss-Prot:P0A6E1" /db_xref="ECOCYC:EG10082" /db_xref="EcoGene:EG10082" /db_xref="GeneID:945031" /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV ISEIRSALAQTINC" mat_peptide 405632..406150 /gene="aroL" /locus_tag="b0388" /gene_synonym="ECK0383; JW0379" /product="shikimate kinase II" /experiment="N-terminus verified by Edman degradation: PMID 3001029,3026317" gene 406203..406394 /gene="yaiA" /locus_tag="b0389" /gene_synonym="ECK0384; JW0380" /db_xref="ECOCYC:EG11093" /db_xref="EcoGene:EG11093" /db_xref="GeneID:945043" CDS 406203..406394 /gene="yaiA" /locus_tag="b0389" /gene_synonym="ECK0384; JW0380" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414923.1" /db_xref="GI:16128374" /db_xref="ASAP:ABE-0001355" /db_xref="UniProtKB/Swiss-Prot:P0AAN5" /db_xref="ECOCYC:EG11093" /db_xref="EcoGene:EG11093" /db_xref="GeneID:945043" /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH PTAQEAMDAKKRYEDPDKE" gene 406652..407329 /gene="aroM" /locus_tag="b0390" /gene_synonym="ECK0385; JW0381" /db_xref="ECOCYC:EG10083" /db_xref="EcoGene:EG10083" /db_xref="GeneID:945045" CDS 406652..407329 /gene="aroM" /locus_tag="b0390" /gene_synonym="ECK0385; JW0381" /note="protein of aro operon, regulated by aroR" /codon_start=1 /transl_table=11 /product="conserved protein, AroM family; regulated by aroR" /protein_id="NP_414924.1" /db_xref="GI:16128375" /db_xref="ASAP:ABE-0001357" /db_xref="UniProtKB/Swiss-Prot:P0AE28" /db_xref="ECOCYC:EG10083" /db_xref="EcoGene:EG10083" /db_xref="GeneID:945045" /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR LAAELLV" gene 407401..407685 /gene="yaiE" /locus_tag="b0391" /gene_synonym="ECK0386; JW0382" /db_xref="ECOCYC:EG12159" /db_xref="EcoGene:EG12159" /db_xref="GeneID:945048" CDS 407401..407685 /gene="yaiE" /locus_tag="b0391" /gene_synonym="ECK0386; JW0382" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0345 family" /protein_id="NP_414925.1" /db_xref="GI:16128376" /db_xref="ASAP:ABE-0001360" /db_xref="UniProtKB/Swiss-Prot:P0C037" /db_xref="ECOCYC:EG12159" /db_xref="EcoGene:EG12159" /db_xref="GeneID:945048" /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL" gene 407893..408174 /gene="ykiA" /locus_tag="b0392" /gene_synonym="ECK0387; JW0383" /pseudo /db_xref="ECOCYC:G6231" /db_xref="EcoGene:EG14282" /db_xref="GeneID:945423" CDS 407893..408174 /gene="ykiA" /locus_tag="b0392" /gene_synonym="ECK0387; JW0383" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001363" /db_xref="UniProtKB/Swiss-Prot:P75704" /db_xref="ECOCYC:G6231" /db_xref="EcoGene:EG14282" /db_xref="GeneID:945423" repeat_region 408276..408312 /note="REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(408332..409243) /gene="rdgC" /locus_tag="b0393" /gene_synonym="ECK0388; JW0384; yaiD" /db_xref="ECOCYC:EG12158" /db_xref="EcoGene:EG12158" /db_xref="GeneID:948585" CDS complement(408332..409243) /gene="rdgC" /locus_tag="b0393" /gene_synonym="ECK0388; JW0384; yaiD" /experiment="N-terminus verified by Edman degradation: PMID 10368163" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function" /protein_id="NP_414927.1" /db_xref="GI:16128378" /db_xref="ASAP:ABE-0001366" /db_xref="UniProtKB/Swiss-Prot:P36767" /db_xref="ECOCYC:EG12158" /db_xref="EcoGene:EG12158" /db_xref="GeneID:948585" /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD ADFILMTGELAALIQNLIEGLGGEAQR" gene 409368..410276 /gene="mak" /locus_tag="b0394" /gene_synonym="ECK0389; JW0385; yajF" /db_xref="ECOCYC:EG11288" /db_xref="EcoGene:EG11288" /db_xref="GeneID:949086" CDS 409368..410276 /gene="mak" /locus_tag="b0394" /gene_synonym="ECK0389; JW0385; yajF" /EC_number="2.7.1.4" /function="putative regulator; Not classified" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="possible NAGC-like transcriptional regulator" /codon_start=1 /transl_table=11 /product="manno(fructo)kinase" /protein_id="NP_414928.2" /db_xref="GI:90111128" /db_xref="ASAP:ABE-0001372" /db_xref="UniProtKB/Swiss-Prot:P23917" /db_xref="ECOCYC:EG11288" /db_xref="EcoGene:EG11288" /db_xref="GeneID:949086" /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA TLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPL PWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESD PVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGE CETPVRKAKHGDSSGVRGAAWLWPQE" repeat_region 410302..410492 /note="REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(410521..411705) /gene="araJ" /locus_tag="b0396" /gene_synonym="ECK0390; JW0386" /db_xref="ECOCYC:EG10060" /db_xref="EcoGene:EG10060" /db_xref="GeneID:949077" CDS complement(410521..411705) /gene="araJ" /locus_tag="b0396" /gene_synonym="ECK0390; JW0386" /function="transport; Degradation of small molecules: Carbon compounds" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="involved in either transport or processing of arabinose polymers" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_414930.3" /db_xref="GI:49176018" /db_xref="ASAP:ABE-0001378" /db_xref="UniProtKB/Swiss-Prot:P23910" /db_xref="ECOCYC:EG10060" /db_xref="EcoGene:EG10060" /db_xref="GeneID:949077" /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF LLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAW FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV LALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP LG" gene complement(411831..414977) /gene="sbcC" /locus_tag="b0397" /gene_synonym="ECK0391; JW0387; rmuA" /db_xref="ECOCYC:EG10927" /db_xref="EcoGene:EG10927" /db_xref="GeneID:949076" CDS complement(411831..414977) /gene="sbcC" /locus_tag="b0397" /gene_synonym="ECK0391; JW0387; rmuA" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 9242643" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006308 - DNA catabolic process" /note="ATP-dependent dsDNA exonuclease" /codon_start=1 /transl_table=11 /product="exonuclease, dsDNA, ATP-dependent" /protein_id="NP_414931.1" /db_xref="GI:16128382" /db_xref="ASAP:ABE-0001381" /db_xref="UniProtKB/Swiss-Prot:P13458" /db_xref="ECOCYC:EG10927" /db_xref="EcoGene:EG10927" /db_xref="GeneID:949076" /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQV QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA AKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE AQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN ELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV KKINGLGYSKLESTFAVK" gene complement(414974..416176) /gene="sbcD" /locus_tag="b0398" /gene_synonym="ECK0392; JW0388; yajA" /db_xref="ECOCYC:EG11094" /db_xref="EcoGene:EG11094" /db_xref="GeneID:945049" CDS complement(414974..416176) /gene="sbcD" /locus_tag="b0398" /gene_synonym="ECK0392; JW0388; yajA" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 9242643" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006308 - DNA catabolic process" /note="ATP-dependent dsDNA exonuclease" /codon_start=1 /transl_table=11 /product="exonuclease, dsDNA, ATP-dependent" /protein_id="NP_414932.1" /db_xref="GI:16128383" /db_xref="ASAP:ABE-0001383" /db_xref="UniProtKB/Swiss-Prot:P0AG76" /db_xref="ECOCYC:EG11094" /db_xref="EcoGene:EG11094" /db_xref="GeneID:945049" /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH TLAGEHEA" gene 416366..417055 /gene="phoB" /locus_tag="b0399" /gene_synonym="ECK0393; JW0389; phoRc" /db_xref="ECOCYC:EG10728" /db_xref="EcoGene:EG10728" /db_xref="GeneID:945046" CDS 416366..417055 /gene="phoB" /locus_tag="b0399" /gene_synonym="ECK0393; JW0389; phoRc" /function="regulator; Global regulatory functions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006793 - phosphorus metabolic process; GO:0006350 - transcription" /note="positive response regulator for pho regulon, sensor is PhoR (or CreC)" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator in two-component regulatory system with PhoR (or CreC)" /protein_id="NP_414933.1" /db_xref="GI:16128384" /db_xref="ASAP:ABE-0001389" /db_xref="UniProtKB/Swiss-Prot:P0AFJ5" /db_xref="ECOCYC:EG10728" /db_xref="EcoGene:EG10728" /db_xref="GeneID:945046" /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV RGTGYRFSTRF" gene 417113..418408 /gene="phoR" /locus_tag="b0400" /gene_synonym="ECK0394; JW0390; nmpB; phoR1; R1pho" /db_xref="ECOCYC:EG10733" /db_xref="EcoGene:EG10733" /db_xref="GeneID:945044" CDS 417113..418408 /gene="phoR" /locus_tag="b0400" /gene_synonym="ECK0394; JW0390; nmpB; phoR1; R1pho" /EC_number="2.7.3.-" /function="enzyme; Global regulatory functions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006793 - phosphorus metabolic process; GO:0006464 - protein modification process" /note="positive and negative sensor protein for pho regulon" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with PhoB" /protein_id="NP_414934.1" /db_xref="GI:16128385" /db_xref="ASAP:ABE-0001391" /db_xref="UniProtKB/Swiss-Prot:P08400" /db_xref="ECOCYC:EG10733" /db_xref="EcoGene:EG10733" /db_xref="GeneID:945044" /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP LTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNE KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD" gene 418815..420134 /gene="brnQ" /locus_tag="b0401" /gene_synonym="ECK0395; hrbA; JW0391" /db_xref="ECOCYC:EG12168" /db_xref="EcoGene:EG12168" /db_xref="GeneID:945042" CDS 418815..420134 /gene="brnQ" /locus_tag="b0401" /gene_synonym="ECK0395; hrbA; JW0391" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009063 - cellular amino acid catabolic process; GO:0009098 - leucine biosynthetic process" /note="branched chain amino acid transport system II carrier protein" /codon_start=1 /transl_table=11 /product="Branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val" /protein_id="NP_414935.1" /db_xref="GI:16128386" /db_xref="ASAP:ABE-0001394" /db_xref="UniProtKB/Swiss-Prot:P0AD99" /db_xref="ECOCYC:EG12168" /db_xref="EcoGene:EG12168" /db_xref="GeneID:945042" /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH" gene 420210..421583 /gene="proY" /locus_tag="b0402" /gene_synonym="ECK0396; JW5055; yajM" /db_xref="ECOCYC:G6233" /db_xref="EcoGene:EG13609" /db_xref="GeneID:945050" CDS 420210..421583 /gene="proY" /locus_tag="b0402" /gene_synonym="ECK0396; JW5055; yajM" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006526 - arginine biosynthetic process; GO:0009063 - cellular amino acid catabolic process" /note="proline permease transport protein" /codon_start=1 /transl_table=11 /product="proline-specific permease" /protein_id="NP_414936.1" /db_xref="GI:16128387" /db_xref="ASAP:ABE-0001398" /db_xref="UniProtKB/Swiss-Prot:P0AAE2" /db_xref="ECOCYC:G6233" /db_xref="EcoGene:EG13609" /db_xref="GeneID:945050" /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD RQLAENQ" repeat_region 421596..421628 /note="REP36 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 421739..423556 /gene="malZ" /locus_tag="b0403" /gene_synonym="ECK0397; JW0393" /db_xref="ECOCYC:EG10565" /db_xref="EcoGene:EG10565" /db_xref="GeneID:949131" CDS 421739..423556 /gene="malZ" /locus_tag="b0403" /gene_synonym="ECK0397; JW0393" /EC_number="3.2.1.20" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0000272 - polysaccharide catabolic process" /codon_start=1 /transl_table=11 /product="maltodextrin glucosidase" /protein_id="NP_414937.1" /db_xref="GI:16128388" /db_xref="ASAP:ABE-0001402" /db_xref="UniProtKB/Swiss-Prot:P21517" /db_xref="ECOCYC:EG10565" /db_xref="EcoGene:EG10565" /db_xref="GeneID:949131" /translation="MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDN EEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMP PARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYR HVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPES PWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGW RLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAM NYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDT ARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQD TALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEV VLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN" gene complement(423561..424142) /gene="acpH" /locus_tag="b0404" /gene_synonym="acpD; ECK0398; JW0394; yajB" /db_xref="ECOCYC:EG11095" /db_xref="EcoGene:EG11095" /db_xref="GeneID:949132" CDS complement(423561..424142) /gene="acpH" /locus_tag="b0404" /gene_synonym="acpD; ECK0398; JW0394; yajB" /function="orf; Not classified" /note="putative glycoprotein" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414938.1" /db_xref="GI:16128389" /db_xref="ASAP:ABE-0001404" /db_xref="UniProtKB/Swiss-Prot:P21515" /db_xref="ECOCYC:EG11095" /db_xref="EcoGene:EG11095" /db_xref="GeneID:949132" /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM HRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFV CYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR DSWYDLDAHYDALETRFWQFYPRMMAQASRKAL" gene 424235..425305 /gene="queA" /locus_tag="b0405" /gene_synonym="ECK0399; JW0395" /db_xref="ECOCYC:EG10812" /db_xref="EcoGene:EG10812" /db_xref="GeneID:944905" CDS 424235..425305 /gene="queA" /locus_tag="b0405" /gene_synonym="ECK0399; JW0395" /EC_number="5.-.-.-" /function="enzyme; queuosine biosynthesis" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009451 - RNA modification" /note="synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /protein_id="NP_414939.1" /db_xref="GI:16128390" /db_xref="ASAP:ABE-0001411" /db_xref="UniProtKB/Swiss-Prot:P0A7F9" /db_xref="ECOCYC:EG10812" /db_xref="EcoGene:EG10812" /db_xref="GeneID:944905" /translation="MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK PGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDA DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF FSYGDAMFITYNPQAINERVGE" gene 425361..426488 /gene="tgt" /locus_tag="b0406" /gene_synonym="ECK0400; JW0396; vacC" /db_xref="ECOCYC:EG10996" /db_xref="EcoGene:EG10996" /db_xref="GeneID:949130" CDS 425361..426488 /gene="tgt" /locus_tag="b0406" /gene_synonym="ECK0400; JW0396; vacC" /EC_number="2.4.2.29" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 8323579" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA-guanine transglycosylase" /protein_id="NP_414940.1" /db_xref="GI:16128391" /db_xref="ASAP:ABE-0001413" /db_xref="UniProtKB/Swiss-Prot:P0A847" /db_xref="ECOCYC:EG10996" /db_xref="EcoGene:EG10996" /db_xref="GeneID:949130" /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD" gene 426511..426843 /gene="yajC" /locus_tag="b0407" /gene_synonym="ECK0401; JW0397" /db_xref="ECOCYC:EG11096" /db_xref="EcoGene:EG11096" /db_xref="GeneID:945374" CDS 426511..426843 /gene="yajC" /locus_tag="b0407" /gene_synonym="ECK0401; JW0397" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="SecYEG protein translocase auxillary subunit" /protein_id="NP_414941.1" /db_xref="GI:16128392" /db_xref="ASAP:ABE-0001415" /db_xref="UniProtKB/Swiss-Prot:P0ADZ7" /db_xref="ECOCYC:EG11096" /db_xref="EcoGene:EG11096" /db_xref="GeneID:945374" /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL PKGTMKAL" gene 426871..428718 /gene="secD" /locus_tag="b0408" /gene_synonym="ECK0402; JW0398" /db_xref="ECOCYC:EG10938" /db_xref="EcoGene:EG10938" /db_xref="GeneID:949133" CDS 426871..428718 /gene="secD" /locus_tag="b0408" /gene_synonym="ECK0402; JW0398" /function="transport; Protein, peptide secretion" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="protein secretion; membrane protein, part of the channel" /codon_start=1 /transl_table=11 /product="SecYEG protein translocase auxillary subunit" /protein_id="NP_414942.1" /db_xref="GI:16128393" /db_xref="ASAP:ABE-0001417" /db_xref="UniProtKB/Swiss-Prot:P0AG90" /db_xref="ECOCYC:EG10938" /db_xref="EcoGene:EG10938" /db_xref="GeneID:949133" /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI" gene 428729..429700 /gene="secF" /locus_tag="b0409" /gene_synonym="ECK0403; JW0399" /db_xref="ECOCYC:EG10940" /db_xref="EcoGene:EG10940" /db_xref="GeneID:949120" CDS 428729..429700 /gene="secF" /locus_tag="b0409" /gene_synonym="ECK0403; JW0399" /function="transport; Protein, peptide secretion" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="protein secretion, membrane protein" /codon_start=1 /transl_table=11 /product="SecYEG protein translocase auxillary subunit" /protein_id="NP_414943.1" /db_xref="GI:16128394" /db_xref="ASAP:ABE-0001419" /db_xref="UniProtKB/Swiss-Prot:P0AG93" /db_xref="ECOCYC:EG10940" /db_xref="EcoGene:EG10940" /db_xref="GeneID:949120" /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP" gene 429829..430176 /gene="yajD" /locus_tag="b0410" /gene_synonym="ECK0404; JW0400" /db_xref="ECOCYC:EG11097" /db_xref="EcoGene:EG11097" /db_xref="GeneID:945051" CDS 429829..430176 /gene="yajD" /locus_tag="b0410" /gene_synonym="ECK0404; JW0400" /codon_start=1 /transl_table=11 /product="conserved protein, HNH family" /protein_id="NP_414944.1" /db_xref="GI:16128395" /db_xref="ASAP:ABE-0001422" /db_xref="UniProtKB/Swiss-Prot:P0AAQ2" /db_xref="ECOCYC:EG11097" /db_xref="EcoGene:EG11097" /db_xref="GeneID:945051" /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN PFADLKAMMNKKK" repeat_region 430192..430289 /note="REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(430353..431237) /gene="tsx" /locus_tag="b0411" /gene_synonym="ECK0405; JW0401; nupA; T6rec" /db_xref="ECOCYC:EG11035" /db_xref="EcoGene:EG11035" /db_xref="GeneID:946242" CDS complement(430353..431237) /gene="tsx" /locus_tag="b0411" /gene_synonym="ECK0405; JW0401; nupA; T6rec" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /note="nucleoside channel; receptor of phage T6 and colicin K" /codon_start=1 /transl_table=11 /product="nucleoside channel, receptor of phage T6 and colicin K" /protein_id="NP_414945.1" /db_xref="GI:16128396" /db_xref="ASAP:ABE-0001425" /db_xref="UniProtKB/Swiss-Prot:P0A927" /db_xref="ECOCYC:EG11035" /db_xref="EcoGene:EG11035" /db_xref="GeneID:946242" /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI EPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMS LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN FNVRSTGWGGYLVVGYNF" gene complement(431536..432075) /gene="yajI" /locus_tag="b0412" /gene_synonym="ECK0406; JW5056" /db_xref="ECOCYC:EG12874" /db_xref="EcoGene:EG12874" /db_xref="GeneID:947233" CDS complement(431536..432075) /gene="yajI" /locus_tag="b0412" /gene_synonym="ECK0406; JW5056" /codon_start=1 /transl_table=11 /product="predicted lipoprotein" /protein_id="NP_414946.4" /db_xref="GI:90111129" /db_xref="ASAP:ABE-0001433" /db_xref="UniProtKB/Swiss-Prot:P46122" /db_xref="ECOCYC:EG12874" /db_xref="EcoGene:EG12874" /db_xref="GeneID:947233" /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN QETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLR IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG ISVDQLGFVRIHDIQPVMQ" gene 432226..432675 /gene="nrdR" /locus_tag="b0413" /gene_synonym="ECK0407; JW0403; ribX; ybaD" /db_xref="ECOCYC:EG11320" /db_xref="EcoGene:EG11320" /db_xref="GeneID:947437" CDS 432226..432675 /gene="nrdR" /locus_tag="b0413" /gene_synonym="ECK0407; JW0403; ribX; ybaD" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_414947.1" /db_xref="GI:16128398" /db_xref="ASAP:ABE-0001437" /db_xref="UniProtKB/Swiss-Prot:P0A8D0" /db_xref="ECOCYC:EG11320" /db_xref="EcoGene:EG11320" /db_xref="GeneID:947437" /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED" gene 432679..433782 /gene="ribD" /locus_tag="b0414" /gene_synonym="ECK0408; JW0404; ribG; ybaE" /db_xref="ECOCYC:EG11321" /db_xref="EcoGene:EG11321" /db_xref="GeneID:945620" CDS 432679..433782 /gene="ribD" /locus_tag="b0414" /gene_synonym="ECK0408; JW0404; ribG; ybaE" /EC_number="3.5.4.26" /EC_number="1.1.1.193" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /codon_start=1 /transl_table=11 /product="fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase" /protein_id="NP_414948.1" /db_xref="GI:16128399" /db_xref="ASAP:ABE-0001441" /db_xref="UniProtKB/Swiss-Prot:P25539" /db_xref="ECOCYC:EG11321" /db_xref="EcoGene:EG11321" /db_xref="GeneID:945620" /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR TAMASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL YPQQNLRQPIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHK GHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA" gene 433871..434341 /gene="ribE" /locus_tag="b0415" /gene_synonym="ECK0409; JW0405; ribH; ybaF" /db_xref="ECOCYC:EG11322" /db_xref="EcoGene:EG11322" /db_xref="GeneID:946453" CDS 433871..434341 /gene="ribE" /locus_tag="b0415" /gene_synonym="ECK0409; JW0405; ribH; ybaF" /EC_number="2.5.1.9" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /note="riboflavin synthase, beta chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase beta chain" /protein_id="NP_414949.1" /db_xref="GI:16128400" /db_xref="ASAP:ABE-0001444" /db_xref="UniProtKB/Swiss-Prot:P61714" /db_xref="ECOCYC:EG11322" /db_xref="EcoGene:EG11322" /db_xref="GeneID:946453" /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA" gene 434361..434780 /gene="nusB" /locus_tag="b0416" /gene_synonym="ECK0410; groNB; JW0406; ssaD; ssyB" /db_xref="ECOCYC:EG10666" /db_xref="EcoGene:EG10666" /db_xref="GeneID:945054" CDS 434361..434780 /gene="nusB" /locus_tag="b0416" /gene_synonym="ECK0410; groNB; JW0406; ssaD; ssyB" /function="factor; RNA synthesis, modification, DNA transcription" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006350 - transcription" /note="transcription termination; L factor" /codon_start=1 /transl_table=11 /product="transcription antitermination protein" /protein_id="NP_414950.1" /db_xref="GI:16128401" /db_xref="ASAP:ABE-0001447" /db_xref="UniProtKB/Swiss-Prot:P0A780" /db_xref="ECOCYC:EG10666" /db_xref="EcoGene:EG10666" /db_xref="GeneID:945054" /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK" gene 434858..435835 /gene="thiL" /locus_tag="b0417" /gene_synonym="ECK0411; JW0407" /db_xref="ECOCYC:G6234" /db_xref="EcoGene:EG20227" /db_xref="GeneID:947387" CDS 434858..435835 /gene="thiL" /locus_tag="b0417" /gene_synonym="ECK0411; JW0407" /EC_number="2.7.4.16" /function="enzyme; Biosynthesis of cofactors, carriers: Thiamin" /GO_process="GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="thiamin-monophosphate kinase" /protein_id="NP_414951.1" /db_xref="GI:16128402" /db_xref="ASAP:ABE-0001452" /db_xref="UniProtKB/Swiss-Prot:P0AGG0" /db_xref="ECOCYC:G6234" /db_xref="EcoGene:EG20227" /db_xref="GeneID:947387" /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI SDLGHIVKASDCGARIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP" gene 435813..436331 /gene="pgpA" /locus_tag="b0418" /gene_synonym="ECK0412; JW0408; yajN" /db_xref="ECOCYC:EG10704" /db_xref="EcoGene:EG10704" /db_xref="GeneID:947542" CDS 435813..436331 /gene="pgpA" /locus_tag="b0418" /gene_synonym="ECK0412; JW0408; yajN" /EC_number="3.1.3.27" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0008654 - phospholipid biosynthetic process" /note="phosphatidylglycerophosphatase" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase A" /protein_id="NP_414952.1" /db_xref="GI:16128403" /db_xref="ASAP:ABE-0001454" /db_xref="UniProtKB/Swiss-Prot:P18200" /db_xref="ECOCYC:EG10704" /db_xref="EcoGene:EG10704" /db_xref="GeneID:947542" /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY FIGHHWPLGILS" repeat_region 436344..436380 /note="REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(436385..437359) /gene="yajO" /locus_tag="b0419" /gene_synonym="ECK0413; JW0409" /db_xref="ECOCYC:G6236" /db_xref="EcoGene:EG13611" /db_xref="GeneID:946903" CDS complement(436385..437359) /gene="yajO" /locus_tag="b0419" /gene_synonym="ECK0413; JW0409" /note="putative NAD(P)H-dependent xylose reductase" /codon_start=1 /transl_table=11 /product="2-carboxybenzaldehyde reductase, function unknown" /protein_id="NP_414953.2" /db_xref="GI:90111130" /db_xref="ASAP:ABE-0001457" /db_xref="UniProtKB/Swiss-Prot:P77735" /db_xref="ECOCYC:G6236" /db_xref="EcoGene:EG13611" /db_xref="GeneID:946903" /translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK" gene complement(437539..439401) /gene="dxs" /locus_tag="b0420" /gene_synonym="ECK0414; JW0410; yajP" /db_xref="ECOCYC:G6237" /db_xref="EcoGene:EG13612" /db_xref="GeneID:945060" CDS complement(437539..439401) /gene="dxs" /locus_tag="b0420" /gene_synonym="ECK0414; JW0410; yajP" /EC_number="2.2.1.7" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_process="GO:0008615 - pyridoxine biosynthetic process; GO:0009228 - thiamin biosynthetic process" /note="1-deoxyxylulose-5-phosphate synthase; flavoprotein" /codon_start=1 /transl_table=11 /product="1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring" /protein_id="NP_414954.1" /db_xref="GI:16128405" /db_xref="ASAP:ABE-0001461" /db_xref="UniProtKB/Swiss-Prot:P77488" /db_xref="ECOCYC:G6237" /db_xref="EcoGene:EG13612" /db_xref="GeneID:945060" /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA FEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI LNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA" mat_peptide complement(437542..439398) /gene="dxs" /locus_tag="b0420" /gene_synonym="ECK0414; JW0410; yajP" /product="1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring" /experiment="N-terminus verified by Edman degradation: PMID 9371765" gene complement(439426..440325) /gene="ispA" /locus_tag="b0421" /gene_synonym="ECK0415; JW0411" /db_xref="ECOCYC:EG10508" /db_xref="EcoGene:EG10508" /db_xref="GeneID:945064" CDS complement(439426..440325) /gene="ispA" /locus_tag="b0421" /gene_synonym="ECK0415; JW0411" /EC_number="2.5.1.10" /EC_number="2.5.1.1" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /experiment="N-terminus verified by Edman degradation: PMID 9740056" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="geranyltranstransferase" /protein_id="NP_414955.1" /db_xref="GI:16128406" /db_xref="ASAP:ABE-0001463" /db_xref="UniProtKB/Swiss-Prot:P22939" /db_xref="ECOCYC:EG10508" /db_xref="EcoGene:EG10508" /db_xref="GeneID:945064" /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH VKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQAL DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ LAEQSLDTSALEALADYIIQRNK" gene complement(440325..440567) /gene="xseB" /locus_tag="b0422" /gene_synonym="ECK0416; JW0412; yajE" /db_xref="ECOCYC:EG11098" /db_xref="EcoGene:EG11098" /db_xref="GeneID:945069" CDS complement(440325..440567) /gene="xseB" /locus_tag="b0422" /gene_synonym="ECK0416; JW0412; yajE" /EC_number="3.1.11.6" /function="enzyme; Degradation of DNA" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006308 - DNA catabolic process; GO:0006281 - DNA repair" /note="exonuclease VII, small subunit" /codon_start=1 /transl_table=11 /product="exonuclease VII small subunit" /protein_id="NP_414956.1" /db_xref="GI:16128407" /db_xref="ASAP:ABE-0001466" /db_xref="UniProtKB/Swiss-Prot:P0A8G9" /db_xref="ECOCYC:EG11098" /db_xref="EcoGene:EG11098" /db_xref="GeneID:945069" /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE" gene 440773..442221 /gene="thiI" /locus_tag="b0423" /gene_synonym="ECK0417; JW0413; nuvA; yajJ; yajK" /db_xref="ECOCYC:G6238" /db_xref="EcoGene:EG13273" /db_xref="GeneID:945067" CDS 440773..442221 /gene="thiI" /locus_tag="b0423" /gene_synonym="ECK0417; JW0413; nuvA; yajJ; yajK" /function="putative enzyme; Not classified" /GO_process="GO:0009451 - RNA modification; GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="tRNA s(4)U8 sulfurtransferase" /protein_id="NP_414957.1" /db_xref="GI:16128408" /db_xref="ASAP:ABE-0001470" /db_xref="UniProtKB/Swiss-Prot:P77718" /db_xref="ECOCYC:G6238" /db_xref="EcoGene:EG13273" /db_xref="GeneID:945067" /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLL LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIAQQTE QEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNK TWLLWCERGVMSRLQALYLREQGFNNVKVYRP" repeat_region 442242..442273 /note="REP39 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(442275..442865) /gene="yajL" /locus_tag="b0424" /gene_synonym="ECK0418; JW5057; thiJ" /db_xref="ECOCYC:G198" /db_xref="EcoGene:EG13272" /db_xref="GeneID:945066" CDS complement(442275..442865) /gene="yajL" /locus_tag="b0424" /gene_synonym="ECK0418; JW5057; thiJ" /GO_process="GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="Oxidative-stress-resistance chaperone" /protein_id="NP_414958.4" /db_xref="GI:90111131" /db_xref="ASAP:ABE-0001472" /db_xref="UniProtKB/Swiss-Prot:Q46948" /db_xref="ECOCYC:G198" /db_xref="EcoGene:EG13272" /db_xref="GeneID:945066" /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGT AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE" gene complement(442828..443739) /gene="panE" /locus_tag="b0425" /gene_synonym="apbA; ECK0419; JW0415" /db_xref="ECOCYC:G6239" /db_xref="EcoGene:EG13271" /db_xref="GeneID:945065" CDS complement(442828..443739) /gene="panE" /locus_tag="b0425" /gene_synonym="apbA; ECK0419; JW0415" /EC_number="1.1.1.169" /function="phenotype; Not classified" /GO_process="GO:0006221 - pyrimidine nucleotide biosynthetic process" /note="2-dehydropantoate 2-reductase" /codon_start=1 /transl_table=11 /product="2-dehydropantoate reductase, NADPH-specific" /protein_id="NP_414959.1" /db_xref="GI:16128410" /db_xref="ASAP:ABE-0001474" /db_xref="UniProtKB/Swiss-Prot:P0A9J4" /db_xref="ECOCYC:G6239" /db_xref="EcoGene:EG13271" /db_xref="GeneID:945065" /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVET DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP ENTRLFEMVKRKESEYERIGTGLPRPW" gene 443907..444398 /gene="yajQ" /locus_tag="b0426" /gene_synonym="ECK0420; JW5058" /db_xref="ECOCYC:G6240" /db_xref="EcoGene:EG13613" /db_xref="GeneID:945063" CDS 443907..444398 /gene="yajQ" /locus_tag="b0426" /gene_synonym="ECK0420; JW5058" /codon_start=1 /transl_table=11 /product="Phi6 host factor; binds ATP and GTP" /protein_id="NP_414960.2" /db_xref="GI:90111132" /db_xref="ASAP:ABE-0001478" /db_xref="UniProtKB/Swiss-Prot:P0A8E7" /db_xref="ECOCYC:G6240" /db_xref="EcoGene:EG13613" /db_xref="GeneID:945063" /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN FRD" mat_peptide 443910..444395 /gene="yajQ" /locus_tag="b0426" /gene_synonym="ECK0420; JW5058" /product="Phi6 host factor; binds ATP and GTP" /experiment="N-terminus verified by Edman degradation: PMID 12381839" repeat_region 444424..444510 /note="REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(444526..445890) /gene="yajR" /locus_tag="b0427" /gene_synonym="ECK0421; JW5059" /db_xref="ECOCYC:G6241" /db_xref="EcoGene:EG13614" /db_xref="GeneID:945058" CDS complement(444526..445890) /gene="yajR" /locus_tag="b0427" /gene_synonym="ECK0421; JW5059" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_414961.4" /db_xref="GI:90111133" /db_xref="ASAP:ABE-0001481" /db_xref="UniProtKB/Swiss-Prot:P77726" /db_xref="ECOCYC:G6241" /db_xref="EcoGene:EG13614" /db_xref="GeneID:945058" /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG YKGTAMGVYSTSQFLGVAIGGSLGGWINGMFDGQGVFLAGAMLAAVWLTVASTMKEPP YVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFEIEQA IRQA" gene complement(446039..446929) /gene="cyoE" /locus_tag="b0428" /gene_synonym="ECK0422; JW0418" /db_xref="ECOCYC:EG10182" /db_xref="EcoGene:EG10182" /db_xref="GeneID:945073" CDS complement(446039..446929) /gene="cyoE" /locus_tag="b0428" /gene_synonym="ECK0422; JW0418" /EC_number="2.5.1.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration" /note="protoheme IX farnesyltransferase (haeme O biosynthesis)" /codon_start=1 /transl_table=11 /product="protoheme IX farnesyltransferase" /protein_id="NP_414962.1" /db_xref="GI:16128413" /db_xref="ASAP:ABE-0001484" /db_xref="UniProtKB/Swiss-Prot:P0AEA5" /db_xref="ECOCYC:EG10182" /db_xref="EcoGene:EG10182" /db_xref="GeneID:945073" /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLW FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS VMMSVDFMVPDSHTLLAAVW" gene complement(446941..447270) /gene="cyoD" /locus_tag="b0429" /gene_synonym="ECK0423; JW0419" /db_xref="ECOCYC:EG10181" /db_xref="EcoGene:EG10181" /db_xref="GeneID:944918" CDS complement(446941..447270) /gene="cyoD" /locus_tag="b0429" /gene_synonym="ECK0423; JW0419" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit IV" /protein_id="NP_414963.1" /db_xref="GI:16128414" /db_xref="ASAP:ABE-0001487" /db_xref="UniProtKB/Swiss-Prot:P0ABJ6" /db_xref="ECOCYC:EG10181" /db_xref="EcoGene:EG10181" /db_xref="GeneID:944918" /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL NYNMMMH" gene complement(447270..447884) /gene="cyoC" /locus_tag="b0430" /gene_synonym="ECK0424; JW0420" /db_xref="ECOCYC:EG10180" /db_xref="EcoGene:EG10180" /db_xref="GeneID:946897" CDS complement(447270..447884) /gene="cyoC" /locus_tag="b0430" /gene_synonym="ECK0424; JW0420" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit III" /protein_id="NP_414964.1" /db_xref="GI:16128415" /db_xref="ASAP:ABE-0001491" /db_xref="UniProtKB/Swiss-Prot:P0ABJ3" /db_xref="ECOCYC:EG10180" /db_xref="EcoGene:EG10180" /db_xref="GeneID:946897" /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL ALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM" gene complement(447874..449865) /gene="cyoB" /locus_tag="b0431" /gene_synonym="ECK0425; JW0421" /db_xref="ECOCYC:EG10179" /db_xref="EcoGene:EG10179" /db_xref="GeneID:945615" CDS complement(447874..449865) /gene="cyoB" /locus_tag="b0431" /gene_synonym="ECK0425; JW0421" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit I" /protein_id="NP_414965.1" /db_xref="GI:16128416" /db_xref="ASAP:ABE-0001493" /db_xref="UniProtKB/Swiss-Prot:P0ABI8" /db_xref="ECOCYC:EG10179" /db_xref="EcoGene:EG10179" /db_xref="GeneID:945615" /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWE MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN" gene complement(449887..450834) /gene="cyoA" /locus_tag="b0432" /gene_synonym="ECK0426; JW0422" /db_xref="ECOCYC:EG10178" /db_xref="EcoGene:EG10178" /db_xref="GeneID:945080" CDS complement(449887..450834) /gene="cyoA" /locus_tag="b0432" /gene_synonym="ECK0426; JW0422" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit II" /protein_id="NP_414966.1" /db_xref="GI:16128417" /db_xref="ASAP:ABE-0001495" /db_xref="UniProtKB/Swiss-Prot:P0ABJ1" /db_xref="ECOCYC:EG10178" /db_xref="EcoGene:EG10178" /db_xref="GeneID:945080" /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM KFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD VINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH" gene complement(451294..452769) /gene="ampG" /locus_tag="b0433" /gene_synonym="ECK0427; JW0423" /db_xref="ECOCYC:EG12183" /db_xref="EcoGene:EG12183" /db_xref="GeneID:946438" CDS complement(451294..452769) /gene="ampG" /locus_tag="b0433" /gene_synonym="ECK0427; JW0423" /function="regulator; Drug/analog sensitivity" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0000270 - peptidoglycan metabolic process" /note="regulates beta-lactamase synthesis" /codon_start=1 /transl_table=11 /product="muropeptide transporter" /protein_id="NP_414967.1" /db_xref="GI:16128418" /db_xref="ASAP:ABE-0001501" /db_xref="UniProtKB/Swiss-Prot:P0AE16" /db_xref="ECOCYC:EG12183" /db_xref="EcoGene:EG12183" /db_xref="GeneID:946438" /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA VPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT" gene complement(452813..453391) /gene="yajG" /locus_tag="b0434" /gene_synonym="ECK0428; JW0424" /db_xref="ECOCYC:EG12182" /db_xref="EcoGene:EG12182" /db_xref="GeneID:945521" CDS complement(452813..453391) /gene="yajG" /locus_tag="b0434" /gene_synonym="ECK0428; JW0424" /function="putative enzyme; Not classified" /note="putative polymerase/proteinase" /codon_start=1 /transl_table=11 /product="predicted lipoprotein" /protein_id="NP_414968.4" /db_xref="GI:90111134" /db_xref="ASAP:ABE-0001504" /db_xref="UniProtKB/Swiss-Prot:P0ADA5" /db_xref="ECOCYC:EG12182" /db_xref="EcoGene:EG12182" /db_xref="GeneID:945521" /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT VSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVN LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNK NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR" gene 453696..454013 /gene="bolA" /locus_tag="b0435" /gene_synonym="ECK0429; JW5060" /db_xref="ECOCYC:EG10125" /db_xref="EcoGene:EG10125" /db_xref="GeneID:947043" CDS 453696..454013 /gene="bolA" /locus_tag="b0435" /gene_synonym="ECK0429; JW5060" /function="putative regulator; Murein sacculus, peptidoglycan" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006970 - response to osmotic stress" /note="possible regulator of murein genes" /codon_start=1 /transl_table=11 /product="stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC" /protein_id="NP_414969.4" /db_xref="GI:90111135" /db_xref="ASAP:ABE-0001508" /db_xref="UniProtKB/Swiss-Prot:P0ABE2" /db_xref="ECOCYC:EG10125" /db_xref="EcoGene:EG10125" /db_xref="GeneID:947043" /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG SIA" gene 454357..455655 /gene="tig" /locus_tag="b0436" /gene_synonym="ECK0430; JW0426" /db_xref="ECOCYC:EG11003" /db_xref="EcoGene:EG11003" /db_xref="GeneID:945081" CDS 454357..455655 /gene="tig" /locus_tag="b0436" /gene_synonym="ECK0430; JW0426" /function="factor; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 2211496,2843289,9298646,9600841,9868784" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /note="trigger factor; a molecular chaperone involved in cell division" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis/trans isomerase (trigger factor)" /protein_id="NP_414970.1" /db_xref="GI:16128421" /db_xref="ASAP:ABE-0001511" /db_xref="UniProtKB/Swiss-Prot:P0A850" /db_xref="ECOCYC:EG11003" /db_xref="EcoGene:EG11003" /db_xref="GeneID:945081" /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEA EDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA" gene 455901..456524 /gene="clpP" /locus_tag="b0437" /gene_synonym="ECK0431; JW0427; lopP; wseA" /db_xref="ECOCYC:EG10158" /db_xref="EcoGene:EG10158" /db_xref="GeneID:945082" CDS 455901..456524 /gene="clpP" /locus_tag="b0437" /gene_synonym="ECK0431; JW0427; lopP; wseA" /EC_number="3.4.21.92" /function="enzyme; Degradation of proteins, peptides, glyco" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0008233 - peptidase activity" /GO_process="GO:0009266 - response to temperature stimulus" /note="ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5" /codon_start=1 /transl_table=11 /product="proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases" /protein_id="NP_414971.1" /db_xref="GI:16128422" /db_xref="ASAP:ABE-0001515" /db_xref="UniProtKB/Swiss-Prot:P0A6G7" /db_xref="ECOCYC:EG10158" /db_xref="EcoGene:EG10158" /db_xref="GeneID:945082" /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN" mat_peptide 455943..456521 /gene="clpP" /locus_tag="b0437" /gene_synonym="ECK0431; JW0427; lopP; wseA" /product="proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases" /experiment="N-terminus verified by Edman degradation: PMID 2197275" gene 456650..457924 /gene="clpX" /locus_tag="b0438" /gene_synonym="ECK0432; JW0428; lopC" /db_xref="ECOCYC:EG10159" /db_xref="EcoGene:EG10159" /db_xref="GeneID:945083" CDS 456650..457924 /gene="clpX" /locus_tag="b0438" /gene_synonym="ECK0432; JW0428; lopC" /function="enzyme; Degradation of proteins, peptides, glyco" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /note="ATP-dependent specificity component of clpP serine protease, chaperone" /codon_start=1 /transl_table=11 /product="ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease" /protein_id="NP_414972.1" /db_xref="GI:16128423" /db_xref="ASAP:ABE-0001517" /db_xref="UniProtKB/Swiss-Prot:P0A6H1" /db_xref="ECOCYC:EG10159" /db_xref="EcoGene:EG10159" /db_xref="GeneID:945083" /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE" mat_peptide 456653..457921 /gene="clpX" /locus_tag="b0438" /gene_synonym="ECK0432; JW0428; lopC" /product="ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease" /experiment="N-terminus verified by Edman degradation: PMID 8226769" gene 458112..460466 /gene="lon" /locus_tag="b0439" /gene_synonym="capR; deg; dir; ECK0433; JW0429; lopA; muc" /db_xref="ECOCYC:EG10542" /db_xref="EcoGene:EG10542" /db_xref="GeneID:945085" CDS 458112..460466 /gene="lon" /locus_tag="b0439" /gene_synonym="capR; deg; dir; ECK0433; JW0429; lopA; muc" /EC_number="3.4.21.53" /function="enzyme; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 2984174,8294008" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0008233 - peptidase activity" /note="DNA-binding, ATP-dependent protease La; heat shock K-protein" /codon_start=1 /transl_table=11 /product="DNA-binding ATP-dependent protease La" /protein_id="NP_414973.1" /db_xref="GI:16128424" /db_xref="ASAP:ABE-0001521" /db_xref="UniProtKB/Swiss-Prot:P0A9M0" /db_xref="ECOCYC:EG10542" /db_xref="EcoGene:EG10542" /db_xref="GeneID:945085" /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK HIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKL TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK" gene 460675..460947 /gene="hupB" /locus_tag="b0440" /gene_synonym="dpeA; ECK0434; hopD; JW0430" /db_xref="ECOCYC:EG10467" /db_xref="EcoGene:EG10467" /db_xref="GeneID:949095" CDS 460675..460947 /gene="hupB" /locus_tag="b0440" /gene_synonym="dpeA; ECK0434; hopD; JW0430" /function="factor; Basic proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 215461,350619,6987059,9298646" /GO_component="GO:0005737 - cytoplasm" /note="DNA-binding protein HU-beta, NS1 (HU-1)" /codon_start=1 /transl_table=11 /product="HU, DNA-binding transcriptional regulator, beta subunit" /protein_id="NP_414974.1" /db_xref="GI:16128425" /db_xref="ASAP:ABE-0001527" /db_xref="UniProtKB/Swiss-Prot:P0ACF4" /db_xref="ECOCYC:EG10467" /db_xref="EcoGene:EG10467" /db_xref="GeneID:949095" /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN" gene 461139..463010 /gene="ppiD" /locus_tag="b0441" /gene_synonym="ECK0435; JW0431; ybaU" /db_xref="ECOCYC:G6242" /db_xref="EcoGene:EG13249" /db_xref="GeneID:946056" CDS 461139..463010 /gene="ppiD" /locus_tag="b0441" /gene_synonym="ECK0435; JW0431; ybaU" /EC_number="5.2.1.8" /function="putative factor; Not classified" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="periplasmic folding chaperone, has an inactive PPIase domain" /protein_id="NP_414975.1" /db_xref="GI:16128426" /db_xref="ASAP:ABE-0001531" /db_xref="UniProtKB/Swiss-Prot:P0ADY1" /db_xref="ECOCYC:G6242" /db_xref="EcoGene:EG13249" /db_xref="GeneID:946056" /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ" gene 463161..463532 /gene="ybaV" /locus_tag="b0442" /gene_synonym="ECK0436; JW0432" /db_xref="ECOCYC:G6243" /db_xref="EcoGene:EG13250" /db_xref="GeneID:945884" CDS 463161..463532 /gene="ybaV" /locus_tag="b0442" /gene_synonym="ECK0436; JW0432" /codon_start=1 /transl_table=11 /product="conserved protein, ComEA homolog" /protein_id="NP_414976.1" /db_xref="GI:16128427" /db_xref="ASAP:ABE-0001534" /db_xref="UniProtKB/Swiss-Prot:P0AAR8" /db_xref="ECOCYC:G6243" /db_xref="EcoGene:EG13250" /db_xref="GeneID:945884" /translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED LKQVPGMGNSLVERNLAVLTL" gene 463626..464024 /gene="fadM" /locus_tag="b0443" /gene_synonym="ECK0437; JW0433; tesC; ybaW" /db_xref="ECOCYC:G6244" /db_xref="EcoGene:EG13251" /db_xref="GeneID:945812" CDS 463626..464024 /gene="fadM" /locus_tag="b0443" /gene_synonym="ECK0437; JW0433; tesC; ybaW" /function="enzyme; fatty acid degradation" /codon_start=1 /transl_table=11 /product="long-chain acyl-CoA thioesterase III" /protein_id="NP_414977.1" /db_xref="GI:16128428" /db_xref="ASAP:ABE-0001537" /db_xref="UniProtKB/Swiss-Prot:P77712" /db_xref="ECOCYC:G6244" /db_xref="EcoGene:EG13251" /db_xref="GeneID:945812" /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA LITFVCIDLKTQKALALEGELREKLEQMVK" repeat_region 464037..464061 /note="REP41 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(464076..464771) /gene="queC" /locus_tag="b0444" /gene_synonym="ECK0438; JW0434; ybaX" /db_xref="ECOCYC:G6245" /db_xref="EcoGene:EG13252" /db_xref="GeneID:947034" CDS complement(464076..464771) /gene="queC" /locus_tag="b0444" /gene_synonym="ECK0438; JW0434; ybaX" /function="putative enzyme: queuosine biosynthesis" /GO_process="GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="required for 7-cyano-7-deazaguanine (preQ0) synthesis" /protein_id="NP_414978.1" /db_xref="GI:16128429" /db_xref="ASAP:ABE-0001539" /db_xref="UniProtKB/Swiss-Prot:P77756" /db_xref="ECOCYC:G6245" /db_xref="EcoGene:EG13252" /db_xref="GeneID:947034" /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL MWIDKAETWALADYYGKLDLVRNETLTCYNGFKGDGCGHCAACNLRANGLNHYLADKP TVMAAMKQKTGLR" gene complement(464836..466536) /gene="ybaE" /locus_tag="b0445" /gene_synonym="ECK0439; JW0435" /db_xref="ECOCYC:EG13217" /db_xref="EcoGene:EG13217" /db_xref="GeneID:949093" CDS complement(464836..466536) /gene="ybaE" /locus_tag="b0445" /gene_synonym="ECK0439; JW0435" /GO_component="GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="predicted transporter subunit: periplasmic-binding component of ABC superfamily" /protein_id="NP_414979.1" /db_xref="GI:16128430" /db_xref="ASAP:ABE-0001542" /db_xref="UniProtKB/Swiss-Prot:P46890" /db_xref="ECOCYC:EG13217" /db_xref="EcoGene:EG13217" /db_xref="GeneID:949093" /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL RQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPG ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTA ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTT LQAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQIMPDEE NRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ" gene 466636..467454 /gene="cof" /locus_tag="b0446" /gene_synonym="ECK0440; JW0436" /db_xref="ECOCYC:G6246" /db_xref="EcoGene:EG13216" /db_xref="GeneID:945089" CDS 466636..467454 /gene="cof" /locus_tag="b0446" /gene_synonym="ECK0440; JW0436" /codon_start=1 /transl_table=11 /product="thiamin pyrimidine pyrophosphate hydrolase; HMP-PP phosphatase" /protein_id="NP_414980.2" /db_xref="GI:90111136" /db_xref="ASAP:ABE-0001548" /db_xref="UniProtKB/Swiss-Prot:P46891" /db_xref="ECOCYC:G6246" /db_xref="EcoGene:EG13216" /db_xref="GeneID:945089" /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE MLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE" gene 467607..468065 /gene="ybaO" /locus_tag="b0447" /gene_synonym="ECK0441; grp?; JW0437" /db_xref="ECOCYC:G6247" /db_xref="EcoGene:EG13218" /db_xref="GeneID:945091" CDS 467607..468065 /gene="ybaO" /locus_tag="b0447" /gene_synonym="ECK0441; grp?; JW0437" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative LRP-like transcriptional regulator" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_414981.4" /db_xref="GI:90111137" /db_xref="ASAP:ABE-0001553" /db_xref="UniProtKB/Swiss-Prot:P0ACJ5" /db_xref="ECOCYC:G6247" /db_xref="EcoGene:EG13218" /db_xref="GeneID:945091" /translation="MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLED DGILIGKVALLDPEKIGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGE YDYLMRVQVADMKRYDEFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE" gene 468095..469867 /gene="mdlA" /locus_tag="b0448" /gene_synonym="ECK0442; JW0438; mdl" /db_xref="ECOCYC:G6248" /db_xref="EcoGene:EG11622" /db_xref="GeneID:945092" CDS 468095..469867 /gene="mdlA" /locus_tag="b0448" /gene_synonym="ECK0442; JW0438; mdl" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components" /protein_id="NP_414982.1" /db_xref="GI:16128433" /db_xref="ASAP:ABE-0001555" /db_xref="UniProtKB/Swiss-Prot:P77265" /db_xref="ECOCYC:G6248" /db_xref="EcoGene:EG11622" /db_xref="GeneID:945092" /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD GVTEQHFTTGQILMWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSR QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL TLFSLLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE HQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDVLAQQSGWYRD MYRYQQLEAALDDAPENREEAVDA" gene 469860..471641 /gene="mdlB" /locus_tag="b0449" /gene_synonym="ECK0443; JW5061; mdl" /db_xref="ECOCYC:EG11622" /db_xref="EcoGene:EG14374" /db_xref="GeneID:945088" CDS 469860..471641 /gene="mdlB" /locus_tag="b0449" /gene_synonym="ECK0443; JW5061; mdl" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components" /protein_id="NP_414983.1" /db_xref="GI:16128434" /db_xref="ASAP:ABE-0001557" /db_xref="UniProtKB/Swiss-Prot:P0AAG5" /db_xref="ECOCYC:EG11622" /db_xref="EcoGene:EG14374" /db_xref="GeneID:945088" /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL LISYFIDNMVAKNNLPLKVVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDR PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG RYWQMYQLQLAGEELAASVREEESLSA" gene 471822..472160 /gene="glnK" /locus_tag="b0450" /gene_synonym="ECK0444; JW0440; ybaI" /db_xref="ECOCYC:EG12191" /db_xref="EcoGene:EG12191" /db_xref="GeneID:945087" CDS 471822..472160 /gene="glnK" /locus_tag="b0450" /gene_synonym="ECK0444; JW0440; ybaI" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /GO_process="GO:0006807 - nitrogen compound metabolic process" /note="nitrogen regulatory protein P-II 2" /codon_start=1 /transl_table=11 /product="nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB" /protein_id="NP_414984.1" /db_xref="GI:16128435" /db_xref="ASAP:ABE-0001562" /db_xref="UniProtKB/Swiss-Prot:P0AC55" /db_xref="ECOCYC:EG12191" /db_xref="EcoGene:EG12191" /db_xref="GeneID:945087" /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI RTGEADEAAL" gene 472190..473476 /gene="amtB" /locus_tag="b0451" /gene_synonym="ECK0445; JW0441; ybaG" /db_xref="ECOCYC:EG11821" /db_xref="EcoGene:EG11821" /db_xref="GeneID:945084" CDS 472190..473476 /gene="amtB" /locus_tag="b0451" /gene_synonym="ECK0445; JW0441; ybaG" /function="putative transport; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="probable ammonium transporter" /codon_start=1 /transl_table=11 /product="ammonium transporter" /protein_id="NP_414985.1" /db_xref="GI:16128436" /db_xref="ASAP:ABE-0001564" /db_xref="UniProtKB/Swiss-Prot:P69681" /db_xref="ECOCYC:EG11821" /db_xref="EcoGene:EG11821" /db_xref="GeneID:945084" /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF MTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINW LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA FIGYKLADLTVGLRVPEEQEREGLDVNSHGENAYNA" mat_peptide 472256..473473 /gene="amtB" /locus_tag="b0451" /gene_synonym="ECK0445; JW0441; ybaG" /product="ammonium transporter" /experiment="N-terminus verified by Edman degradation: PMID 15361618,16630265" repeat_region 473495..473517 /note="REP42 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(473525..474385) /gene="tesB" /locus_tag="b0452" /gene_synonym="ECK0446; JW0442" /db_xref="ECOCYC:EG10995" /db_xref="EcoGene:EG10995" /db_xref="GeneID:945074" CDS complement(473525..474385) /gene="tesB" /locus_tag="b0452" /gene_synonym="ECK0446; JW0442" /EC_number="3.1.2.-" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase II" /protein_id="NP_414986.1" /db_xref="GI:16128437" /db_xref="ASAP:ABE-0001566" /db_xref="UniProtKB/Swiss-Prot:P0AGG2" /db_xref="ECOCYC:EG10995" /db_xref="EcoGene:EG10995" /db_xref="GeneID:945074" /translation="MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQAL YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST VQEGVMRNHN" mat_peptide complement(473528..474382) /gene="tesB" /locus_tag="b0452" /gene_synonym="ECK0446; JW0442" /product="acyl-CoA thioesterase II" /experiment="N-terminus verified by Edman degradation: PMID 1645722" gene 474603..475175 /gene="ybaY" /locus_tag="b0453" /gene_synonym="ECK0447; JW0443" /db_xref="ECOCYC:G6250" /db_xref="EcoGene:EG13253" /db_xref="GeneID:945070" CDS 474603..475175 /gene="ybaY" /locus_tag="b0453" /gene_synonym="ECK0447; JW0443" /function="phenotype; Not classified" /GO_process="GO:0009101 - glycoprotein biosynthetic process; GO:0042158 - lipoprotein biosynthetic process" /note="glycoprotein/polysaccharide metabolism" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein" /protein_id="NP_414987.3" /db_xref="GI:49176025" /db_xref="ASAP:ABE-0001574" /db_xref="UniProtKB/Swiss-Prot:P77717" /db_xref="ECOCYC:G6250" /db_xref="EcoGene:EG13253" /db_xref="GeneID:945070" /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV LSFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPV QASGGATTTVPSTSPTQVNPSSAVPAPTQY" gene complement(475206..475595) /gene="ybaZ" /locus_tag="b0454" /gene_synonym="ECK0448; JW0444" /db_xref="ECOCYC:G6251" /db_xref="EcoGene:EG13254" /db_xref="GeneID:945094" CDS complement(475206..475595) /gene="ybaZ" /locus_tag="b0454" /gene_synonym="ECK0448; JW0444" /codon_start=1 /transl_table=11 /product="binds and enhances nucleotide excision repair of O(6)-alkylguanine; degenerate cysteine methyltransferase homolog" /protein_id="NP_414988.1" /db_xref="GI:16128439" /db_xref="ASAP:ABE-0001576" /db_xref="UniProtKB/Swiss-Prot:P0AFP2" /db_xref="ECOCYC:G6251" /db_xref="EcoGene:EG13254" /db_xref="GeneID:945094" /translation="MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAI PEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQR QRQALLAEGVMVSGSGQIDLQRYRWNY" gene 475672..475785 /gene="ffs" /locus_tag="b0455" /gene_synonym="ECK0449; JWR0009" /db_xref="ECOCYC:EG30027" /db_xref="EcoGene:EG30027" /db_xref="GeneID:944909" ncRNA 475672..475785 /gene="ffs" /locus_tag="b0455" /gene_synonym="ECK0449; JWR0009" /ncRNA_class="SRP_RNA" /product="4.5S sRNA component of Signal Recognition Particle (SRP)" /note="4.5S RNA; component of ribonucleoprotein particle; works with the Ffh protein; adjusted endpoints to reflect the mature 4.5S RNA (114 nt)" /function="2.2.6 information transfer; RNA related; rRNA, stable RNA" /function="2.3.2 information transfer; protein related; translation" /function="7.1 location of gene products; cytoplasm" /function="component of Signal Recognition Particle (SRP) with the Ffh protein; involved in co-translational targeting of proteins to membranes" /function="RNA; Ribosomal and stable RNAs" /db_xref="ASAP:ABE-0001579" /db_xref="ECOCYC:EG30027" /db_xref="EcoGene:EG30027" /db_xref="GeneID:944909" gene 475896..476249 /gene="ybaA" /locus_tag="b0456" /gene_synonym="ECK0450; JW0445" /db_xref="ECOCYC:EG11099" /db_xref="EcoGene:EG11099" /db_xref="GeneID:948863" CDS 475896..476249 /gene="ybaA" /locus_tag="b0456" /gene_synonym="ECK0450; JW0445" /codon_start=1 /transl_table=11 /product="conserved protein, DUF1428 family" /protein_id="NP_414989.1" /db_xref="GI:16128440" /db_xref="ASAP:ABE-0001582" /db_xref="UniProtKB/Swiss-Prot:P0AAQ6" /db_xref="ECOCYC:EG11099" /db_xref="EcoGene:EG11099" /db_xref="GeneID:948863" /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD GKRMIYGGFESIIDE" gene complement(476291..477841) /gene="ylaB" /locus_tag="b0457" /gene_synonym="ECK0451; JW5062" /db_xref="ECOCYC:G6252" /db_xref="EcoGene:EG14237" /db_xref="GeneID:948951" CDS complement(476291..477841) /gene="ylaB" /locus_tag="b0457" /gene_synonym="ECK0451; JW5062" /codon_start=1 /transl_table=11 /product="predicted cyclic-di-GMP phosphodiesterase" /protein_id="NP_414990.2" /db_xref="GI:90111138" /db_xref="ASAP:ABE-0001584" /db_xref="UniProtKB/Swiss-Prot:P77473" /db_xref="ECOCYC:G6252" /db_xref="EcoGene:EG14237" /db_xref="GeneID:948951" /translation="MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTY SSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNV PQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP LPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF LRWAEQHL" gene complement(478005..478475) /gene="ylaC" /locus_tag="b0458" /gene_synonym="ECK0452; JW5063" /db_xref="ECOCYC:G6253" /db_xref="EcoGene:EG14238" /db_xref="GeneID:948876" CDS complement(478005..478475) /gene="ylaC" /locus_tag="b0458" /gene_synonym="ECK0452; JW5063" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF1449 family" /protein_id="NP_414991.4" /db_xref="GI:90111139" /db_xref="ASAP:ABE-0001587" /db_xref="UniProtKB/Swiss-Prot:P0AAS0" /db_xref="ECOCYC:G6253" /db_xref="EcoGene:EG14238" /db_xref="GeneID:948876" /translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE WYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS" gene complement(478591..479142) /gene="maa" /locus_tag="b0459" /gene_synonym="ECK0453; JW0448; ylaD" /db_xref="ECOCYC:G58" /db_xref="EcoGene:EG14239" /db_xref="GeneID:945096" CDS complement(478591..479142) /gene="maa" /locus_tag="b0459" /gene_synonym="ECK0453; JW0448; ylaD" /EC_number="2.3.1.79" /function="putative enzyme; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="maltose O-acetyltransferase" /protein_id="NP_414992.1" /db_xref="GI:16128443" /db_xref="ASAP:ABE-0001591" /db_xref="UniProtKB/Swiss-Prot:P77791" /db_xref="ECOCYC:G58" /db_xref="EcoGene:EG14239" /db_xref="GeneID:945096" /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA VVTKDVPDNVVVGGNPARIIKKL" mat_peptide complement(478594..479139) /gene="maa" /locus_tag="b0459" /gene_synonym="ECK0453; JW0448; ylaD" /product="maltose O-acetyltransferase" /experiment="N-terminus verified by Edman degradation: PMID 9600841,9740056" gene complement(479314..479532) /gene="hha" /locus_tag="b0460" /gene_synonym="ECK0454; JW0449" /db_xref="ECOCYC:EG10439" /db_xref="EcoGene:EG10439" /db_xref="GeneID:945098" CDS complement(479314..479532) /gene="hha" /locus_tag="b0460" /gene_synonym="ECK0454; JW0449" /function="regulator; Proteins - translation and modification" /GO_process="GO:0006350 - transcription" /note="haemolysin expression modulating protein" /codon_start=1 /transl_table=11 /product="modulator of gene expression, with H-NS" /protein_id="NP_414993.1" /db_xref="GI:16128444" /db_xref="ASAP:ABE-0001594" /db_xref="UniProtKB/Swiss-Prot:P0ACE3" /db_xref="ECOCYC:EG10439" /db_xref="EcoGene:EG10439" /db_xref="GeneID:945098" /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY SAADHRLAELTMNKLYDKIPSSVWKFIR" gene complement(479558..479932) /gene="tomB" /locus_tag="b0461" /gene_synonym="ECK0455; JW0450; ybaJ" /db_xref="ECOCYC:EG12429" /db_xref="EcoGene:EG12429" /db_xref="GeneID:945106" CDS complement(479558..479932) /gene="tomB" /locus_tag="b0461" /gene_synonym="ECK0455; JW0450; ybaJ" /codon_start=1 /transl_table=11 /product="Hha toxicity attenuator; conjugation-related protein" /protein_id="NP_414994.1" /db_xref="GI:16128445" /db_xref="ASAP:ABE-0001596" /db_xref="UniProtKB/Swiss-Prot:P0AAR0" /db_xref="ECOCYC:EG12429" /db_xref="EcoGene:EG12429" /db_xref="GeneID:945106" /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAI NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK SGNRLFRCFVNATKENPASLSC" gene complement(480478..483627) /gene="acrB" /locus_tag="b0462" /gene_synonym="acrE; ECK0456; JW0451" /db_xref="ECOCYC:EG11704" /db_xref="EcoGene:EG11704" /db_xref="GeneID:945108" CDS complement(480478..483627) /gene="acrB" /locus_tag="b0462" /gene_synonym="acrE; ECK0456; JW0451" /function="transport; Drug/analog sensitivity" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="acridine efflux pump" /codon_start=1 /transl_table=11 /product="multidrug efflux system protein" /protein_id="NP_414995.1" /db_xref="GI:16128446" /db_xref="ASAP:ABE-0001601" /db_xref="UniProtKB/Swiss-Prot:P31224" /db_xref="ECOCYC:EG11704" /db_xref="EcoGene:EG11704" /db_xref="GeneID:945108" /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR RRFSRKNEDIEHSHTVDHH" gene complement(483650..484843) /gene="acrA" /locus_tag="b0463" /gene_synonym="ECK0457; JW0452; lir; Mb; mbl; mtcA; sipB" /db_xref="ECOCYC:EG11703" /db_xref="EcoGene:EG11703" /db_xref="GeneID:945112" CDS complement(483650..484843) /gene="acrA" /locus_tag="b0463" /gene_synonym="ECK0457; JW0452; lir; Mb; mbl; mtcA; sipB" /function="transport; Drug/analog sensitivity" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="acridine efflux pump" /codon_start=1 /transl_table=11 /product="multidrug efflux system" /protein_id="NP_414996.1" /db_xref="GI:16128447" /db_xref="ASAP:ABE-0001603" /db_xref="UniProtKB/Swiss-Prot:P0AE06" /db_xref="ECOCYC:EG11703" /db_xref="EcoGene:EG11703" /db_xref="GeneID:945112" /translation="MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVT VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA KAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP EQSKS" gene 484985..485632 /gene="acrR" /locus_tag="b0464" /gene_synonym="ECK0458; JW0453; ybaH" /db_xref="ECOCYC:EG12116" /db_xref="EcoGene:EG12116" /db_xref="GeneID:945516" CDS 484985..485632 /gene="acrR" /locus_tag="b0464" /gene_synonym="ECK0458; JW0453; ybaH" /function="regulator; Drug/analog sensitivity" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0042493 - response to drug; GO:0006350 - transcription" /note="acrAB operon repressor" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor" /protein_id="NP_414997.1" /db_xref="GI:16128448" /db_xref="ASAP:ABE-0001608" /db_xref="UniProtKB/Swiss-Prot:P0ACS9" /db_xref="ECOCYC:EG12116" /db_xref="EcoGene:EG12116" /db_xref="GeneID:945516" /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE" gene 485760..489122 /gene="kefA" /locus_tag="b0465" /gene_synonym="aefA; ECK0459; JW0454; mscK; pnuH" /db_xref="ECOCYC:G6255" /db_xref="EcoGene:EG14240" /db_xref="GeneID:945132" CDS 485760..489122 /gene="kefA" /locus_tag="b0465" /gene_synonym="aefA; ECK0459; JW0454; mscK; pnuH" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="mechanosensitive channel protein" /codon_start=1 /transl_table=11 /product="fused conserved protein" /protein_id="NP_414998.1" /db_xref="GI:16128449" /db_xref="ASAP:ABE-0001613" /db_xref="UniProtKB/Swiss-Prot:P77338" /db_xref="ECOCYC:G6255" /db_xref="EcoGene:EG14240" /db_xref="GeneID:945132" /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK ADLQAQLDSLNKQKDLSAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWQKAWPAVFIAFL AGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLAGRWIETVYLVIIWNLLYQ TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM FALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG" repeat_region 489183..489280 /note="RIP43 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(489334..489495) /gene="ybaM" /locus_tag="b0466" /gene_synonym="ECK0460; JW0455" /db_xref="ECOCYC:EG12830" /db_xref="EcoGene:EG12830" /db_xref="GeneID:945144" CDS complement(489334..489495) /gene="ybaM" /locus_tag="b0466" /gene_synonym="ECK0460; JW0455" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_414999.1" /db_xref="GI:16128450" /db_xref="ASAP:ABE-0001616" /db_xref="UniProtKB/Swiss-Prot:P45807" /db_xref="ECOCYC:EG12830" /db_xref="EcoGene:EG12830" /db_xref="GeneID:945144" /translation="MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKK LTRDDEAEK" gene complement(489509..490036) /gene="priC" /locus_tag="b0467" /gene_synonym="ECK0461; JW0456" /db_xref="ECOCYC:EG10765" /db_xref="EcoGene:EG10765" /db_xref="GeneID:945071" CDS complement(489509..490036) /gene="priC" /locus_tag="b0467" /gene_synonym="ECK0461; JW0456" /function="factor; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="primosomal replication protein N''" /protein_id="NP_415000.1" /db_xref="GI:16128451" /db_xref="ASAP:ABE-0001619" /db_xref="UniProtKB/Swiss-Prot:P23862" /db_xref="ECOCYC:EG10765" /db_xref="EcoGene:EG10765" /db_xref="GeneID:945071" /translation="MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRAT TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR HALEKIENRLARLTR" mat_peptide complement(489512..490033) /gene="priC" /locus_tag="b0467" /gene_synonym="ECK0461; JW0456" /product="primosomal replication protein N''" /experiment="N-terminus verified by Edman degradation: PMID 1856227" gene 490106..490483 /gene="ybaN" /locus_tag="b0468" /gene_synonym="ECK0462; JW0457" /db_xref="ECOCYC:EG12843" /db_xref="EcoGene:EG12843" /db_xref="GeneID:945558" CDS 490106..490483 /gene="ybaN" /locus_tag="b0468" /gene_synonym="ECK0462; JW0457" /function="orf; Not classified" /note="putative gene 58" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF454 family" /protein_id="NP_415001.1" /db_xref="GI:16128452" /db_xref="ASAP:ABE-0001625" /db_xref="UniProtKB/Swiss-Prot:P0AAR5" /db_xref="ECOCYC:EG12843" /db_xref="EcoGene:EG12843" /db_xref="GeneID:945558" /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL VILACLLFYMWRIPVIDEKQEKH" gene 490636..491187 /gene="apt" /locus_tag="b0469" /gene_synonym="ECK0463; JW0458" /db_xref="ECOCYC:EG10051" /db_xref="EcoGene:EG10051" /db_xref="GeneID:945113" CDS 490636..491187 /gene="apt" /locus_tag="b0469" /gene_synonym="ECK0463; JW0458" /EC_number="2.4.2.7" /function="enzyme; Salvage of nucleosides and nucleotides" /experiment="N-terminus verified by Edman degradation: PMID 9573169" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="NP_415002.1" /db_xref="GI:16128453" /db_xref="ASAP:ABE-0001628" /db_xref="UniProtKB/Swiss-Prot:P69503" /db_xref="ECOCYC:EG10051" /db_xref="EcoGene:EG10051" /db_xref="GeneID:945113" /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD LGGEQRLEKQGITSYSLVPFPGH" gene 491316..493247 /gene="dnaX" /locus_tag="b0470" /gene_synonym="dnaZ; ECK0464; JW0459" /db_xref="ECOCYC:EG10245" /db_xref="EcoGene:EG10245" /db_xref="GeneID:945105" CDS 491316..493247 /gene="dnaX" /locus_tag="b0470" /gene_synonym="dnaZ; ECK0464; JW0459" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /note="DNA polymerase III, tau and gamma subunits; DNA elongation factor III" /codon_start=1 /transl_table=11 /product="DNA polymerase III/DNA elongation factor III, tau and gamma subunits" /protein_id="NP_415003.1" /db_xref="GI:16128454" /db_xref="ASAP:ABE-0001633" /db_xref="UniProtKB/Swiss-Prot:P06710" /db_xref="ECOCYC:EG10245" /db_xref="EcoGene:EG10245" /db_xref="GeneID:945105" /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERL ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPE LAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNR GAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNI QTLRRFFDAELDEESIRPI" mat_peptide 491319..493244 /gene="dnaX" /locus_tag="b0470" /gene_synonym="dnaZ; ECK0464; JW0459" /product="DNA polymerase III/DNA elongation factor III, tau and gamma subunits" /experiment="N-terminus verified by Edman degradation: PMID 3283125" gene 493300..493629 /gene="ybaB" /locus_tag="b0471" /gene_synonym="ECK0465; JW0460" /db_xref="ECOCYC:EG11100" /db_xref="EcoGene:EG11100" /db_xref="GeneID:945104" CDS 493300..493629 /gene="ybaB" /locus_tag="b0471" /gene_synonym="ECK0465; JW0460" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415004.1" /db_xref="GI:16128455" /db_xref="ASAP:ABE-0001636" /db_xref="UniProtKB/Swiss-Prot:P0A8B5" /db_xref="ECOCYC:EG11100" /db_xref="EcoGene:EG11100" /db_xref="GeneID:945104" /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP PGFKMPF" gene 493629..494234 /gene="recR" /locus_tag="b0472" /gene_synonym="ECK0466; JW0461" /db_xref="ECOCYC:EG10834" /db_xref="EcoGene:EG10834" /db_xref="GeneID:945100" CDS 493629..494234 /gene="recR" /locus_tag="b0472" /gene_synonym="ECK0466; JW0461" /function="putative enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006310 - DNA recombination; GO:0006281 - DNA repair" /note="recombination and repair" /codon_start=1 /transl_table=11 /product="gap repair protein" /protein_id="NP_415005.1" /db_xref="GI:16128456" /db_xref="ASAP:ABE-0001638" /db_xref="UniProtKB/Swiss-Prot:P0A7H6" /db_xref="ECOCYC:EG10834" /db_xref="EcoGene:EG10834" /db_xref="GeneID:945100" /translation="MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLA QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF" gene 494344..496218 /gene="htpG" /locus_tag="b0473" /gene_synonym="ECK0467; JW0462" /db_xref="ECOCYC:EG10461" /db_xref="EcoGene:EG10461" /db_xref="GeneID:945099" CDS 494344..496218 /gene="htpG" /locus_tag="b0473" /gene_synonym="ECK0467; JW0462" /function="factor; Chaperones" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /GO_process="GO:0006457 - protein folding" /note="chaperone Hsp90, heat shock protein C 62.5" /codon_start=1 /transl_table=11 /product="molecular chaperone HSP90 family" /protein_id="NP_415006.1" /db_xref="GI:16128457" /db_xref="ASAP:ABE-0001642" /db_xref="UniProtKB/Swiss-Prot:P0A6Z3" /db_xref="ECOCYC:EG10461" /db_xref="EcoGene:EG10461" /db_xref="GeneID:945099" /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS" repeat_region 496225..496250 /note="REP44 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 496399..497043 /gene="adk" /locus_tag="b0474" /gene_synonym="dnaW; ECK0468; JW0463; plsA" /db_xref="ECOCYC:EG10032" /db_xref="EcoGene:EG10032" /db_xref="GeneID:945097" CDS 496399..497043 /gene="adk" /locus_tag="b0474" /gene_synonym="dnaW; ECK0468; JW0463; plsA" /EC_number="2.7.4.3" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3027060,8650159,9298646,9600841" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO:0009152 - purine ribonucleotide biosynthetic process" /note="adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity" /codon_start=1 /transl_table=11 /product="adenylate kinase" /protein_id="NP_415007.1" /db_xref="GI:16128458" /db_xref="ASAP:ABE-0001645" /db_xref="UniProtKB/Swiss-Prot:P69441" /db_xref="ECOCYC:EG10032" /db_xref="EcoGene:EG10032" /db_xref="GeneID:945097" /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG" repeat_region 497140..497157 /note="REP45 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 497279..498241 /gene="hemH" /locus_tag="b0475" /gene_synonym="ECK0469; JW0464; popA; visA" /db_xref="ECOCYC:EG10431" /db_xref="EcoGene:EG10431" /db_xref="GeneID:947532" CDS 497279..498241 /gene="hemH" /locus_tag="b0475" /gene_synonym="ECK0469; JW0464; popA; visA" /EC_number="4.99.1.1" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /experiment="N-terminus verified by Edman degradation: PMID 8056770" /note="ferrochelatase: final enzyme of heme biosynthesis" /codon_start=1 /transl_table=11 /product="ferrochelatase" /protein_id="NP_415008.1" /db_xref="GI:16128459" /db_xref="ASAP:ABE-0001649" /db_xref="UniProtKB/Swiss-Prot:P23871" /db_xref="ECOCYC:EG10431" /db_xref="EcoGene:EG10431" /db_xref="GeneID:947532" /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSY GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET LEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR" gene complement(498238..499197) /gene="aes" /locus_tag="b0476" /gene_synonym="ECK0470; JW0465; ybaC" /db_xref="ECOCYC:EG11101" /db_xref="EcoGene:EG11101" /db_xref="GeneID:947514" CDS complement(498238..499197) /gene="aes" /locus_tag="b0476" /gene_synonym="ECK0470; JW0465; ybaC" /EC_number="3.1.1.-" /function="orf; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9576853" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="acetyl esterase" /protein_id="NP_415009.1" /db_xref="GI:16128460" /db_xref="ASAP:ABE-0001651" /db_xref="UniProtKB/Swiss-Prot:P23872" /db_xref="ECOCYC:EG11101" /db_xref="EcoGene:EG11101" /db_xref="GeneID:947514" /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPPWPATGTIAEQRQYY TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT HDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA AHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL" gene 499349..500653 /gene="gsk" /locus_tag="b0477" /gene_synonym="ECK0471; JW0466" /db_xref="ECOCYC:EG11102" /db_xref="EcoGene:EG11102" /db_xref="GeneID:946584" CDS 499349..500653 /gene="gsk" /locus_tag="b0477" /gene_synonym="ECK0471; JW0466" /EC_number="2.7.1.73" /function="enzyme; Salvage of nucleosides and nucleotides" /experiment="N-terminus verified by Edman degradation: PMID 7721718" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /note="inosine-guanosine kinase" /codon_start=1 /transl_table=11 /product="inosine/guanosine kinase" /protein_id="NP_415010.1" /db_xref="GI:16128461" /db_xref="ASAP:ABE-0001655" /db_xref="UniProtKB/Swiss-Prot:P0AEW6" /db_xref="ECOCYC:EG11102" /db_xref="EcoGene:EG11102" /db_xref="GeneID:946584" /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR" repeat_region 500668..500751 /note="REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(500786..502462) /gene="ybaL" /locus_tag="b0478" /gene_synonym="ECK0472; JW0467; ylaA" /db_xref="ECOCYC:EG12623" /db_xref="EcoGene:EG12623" /db_xref="GeneID:946576" CDS complement(500786..502462) /gene="ybaL" /locus_tag="b0478" /gene_synonym="ECK0472; JW0467; ylaA" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicted transporter with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415011.1" /db_xref="GI:16128462" /db_xref="ASAP:ABE-0001658" /db_xref="UniProtKB/Swiss-Prot:P39830" /db_xref="ECOCYC:EG12623" /db_xref="EcoGene:EG12623" /db_xref="GeneID:946576" /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS AATGSRELFTLSVLALALGVAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG" gene complement(502700..503920) /gene="fsr" /locus_tag="b0479" /gene_synonym="ECK0473; JW0468" /db_xref="ECOCYC:G6256" /db_xref="EcoGene:EG13268" /db_xref="GeneID:945119" CDS complement(502700..503920) /gene="fsr" /locus_tag="b0479" /gene_synonym="ECK0473; JW0468" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="fosmidomycin resistance protein" /codon_start=1 /transl_table=11 /product="predicted fosmidomycin efflux system" /protein_id="NP_415012.1" /db_xref="GI:16128463" /db_xref="ASAP:ABE-0001661" /db_xref="UniProtKB/Swiss-Prot:P52067" /db_xref="ECOCYC:G6256" /db_xref="EcoGene:EG13268" /db_xref="GeneID:945119" /translation="MAMSEQPQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS GLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG SSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN PLPRNKVVLAVSILLILIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAV AAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFS AILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLL GMLTIFLPDNRHKD" gene 504138..505790 /gene="ushA" /locus_tag="b0480" /gene_synonym="ECK0474; JW0469" /db_xref="ECOCYC:EG11060" /db_xref="EcoGene:EG11060" /db_xref="GeneID:947331" CDS 504138..505790 /gene="ushA" /locus_tag="b0480" /gene_synonym="ECK0474; JW0469" /EC_number="3.6.1.45" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009226 - nucleotide-sugar biosynthetic process" /note="UDP-sugar hydrolase (5'-nucleotidase)" /codon_start=1 /transl_table=11 /product="bifunctional UDP-sugar hydrolase/5'-nucleotidase" /protein_id="NP_415013.1" /db_xref="GI:16128464" /db_xref="ASAP:ABE-0001668" /db_xref="UniProtKB/Swiss-Prot:P07024" /db_xref="ECOCYC:EG11060" /db_xref="EcoGene:EG11060" /db_xref="GeneID:947331" /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR QDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHM GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCK PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV AQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ" mat_peptide 504213..505787 /gene="ushA" /locus_tag="b0480" /gene_synonym="ECK0474; JW0469" /product="bifunctional UDP-sugar hydrolase/5'-nucleotidase" /experiment="N-terminus verified by Edman degradation: PMID 3012467,9298646" repeat_region 505800..505819 /note="REP47 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(505827..506306) /gene="ybaK" /locus_tag="b0481" /gene_synonym="ECK0475; JW0470" /db_xref="ECOCYC:EG12454" /db_xref="EcoGene:EG12454" /db_xref="GeneID:947083" CDS complement(505827..506306) /gene="ybaK" /locus_tag="b0481" /gene_synonym="ECK0475; JW0470" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415014.1" /db_xref="GI:16128465" /db_xref="ASAP:ABE-0001670" /db_xref="UniProtKB/Swiss-Prot:P0AAR3" /db_xref="ECOCYC:EG12454" /db_xref="EcoGene:EG12454" /db_xref="GeneID:947083" /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGG ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD" gene 506428..506511 /gene="chiX" /locus_tag="b4585" /gene_synonym="ECK4396; er13; micM; rybC; sroB" /db_xref="ECOCYC:G0-9382" /db_xref="EcoGene:EG31175" /db_xref="GeneID:5061500" ncRNA 506428..506511 /gene="chiX" /locus_tag="b4585" /gene_synonym="ECK4396; er13; micM; rybC; sroB" /ncRNA_class="antisense_RNA" /product="sRNA antisense regulator of OM chitoporin ChiP(YbfM), Hfq-dependent" /db_xref="ECOCYC:G0-9382" /db_xref="EcoGene:EG31175" /db_xref="GeneID:5061500" gene complement(506510..507304) /gene="ybaP" /locus_tag="b0482" /gene_synonym="ECK0476; JW0471" /db_xref="ECOCYC:G6258" /db_xref="EcoGene:EG13244" /db_xref="GeneID:945124" CDS complement(506510..507304) /gene="ybaP" /locus_tag="b0482" /gene_synonym="ECK0476; JW0471" /function="putative enzyme; Not classified" /note="putative ligase" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415015.1" /db_xref="GI:16128466" /db_xref="ASAP:ABE-0001673" /db_xref="UniProtKB/Swiss-Prot:P77301" /db_xref="ECOCYC:G6258" /db_xref="EcoGene:EG13244" /db_xref="GeneID:945124" /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS HDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHIS QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG AENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR" gene 507442..507783 /gene="ybaQ" /locus_tag="b0483" /gene_synonym="ECK0477; JW0472" /db_xref="ECOCYC:G6259" /db_xref="EcoGene:EG13245" /db_xref="GeneID:948800" CDS 507442..507783 /gene="ybaQ" /locus_tag="b0483" /gene_synonym="ECK0477; JW0472" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415016.4" /db_xref="GI:90111140" /db_xref="ASAP:ABE-0001677" /db_xref="UniProtKB/Swiss-Prot:P0A9T6" /db_xref="ECOCYC:G6259" /db_xref="EcoGene:EG13245" /db_xref="GeneID:948800" /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSAL INNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL ARREERAKKVA" repeat_region 507806..508041 /note="REP48 (repetitive extragenic palindromic) element; contains 5 REP sequences" gene complement(508099..510603) /gene="copA" /locus_tag="b0484" /gene_synonym="ECK0478; JW0473; ybaR" /db_xref="ECOCYC:G6260" /db_xref="EcoGene:EG13246" /db_xref="GeneID:946106" CDS complement(508099..510603) /gene="copA" /locus_tag="b0484" /gene_synonym="ECK0478; JW0473; ybaR" /EC_number="3.6.3.4" /function="putative enzyme; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /codon_start=1 /transl_table=11 /product="copper transporter" /protein_id="NP_415017.1" /db_xref="GI:16128468" /db_xref="ASAP:ABE-0001681" /db_xref="UniProtKB/Swiss-Prot:Q59385" /db_xref="ECOCYC:G6260" /db_xref="EcoGene:EG13246" /db_xref="GeneID:946106" /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEK SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGT VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALV SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVGTKAIEAEITA QASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA IAKEAGIDEVIAGVLPDGKAEAIKHLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG SDVAIETAAITLMRHSLMGVADALAISRATLHNMKQNLLGAFIYNSIGIPVAAGILWP FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE" mat_peptide complement(508102..510600) /gene="copA" /locus_tag="b0484" /gene_synonym="ECK0478; JW0473; ybaR" /product="copper transporter" /experiment="N-terminus verified by Edman degradation: PMID 9868784" gene 510865..511797 /gene="ybaS" /locus_tag="b0485" /gene_synonym="ECK0479; JW0474" /db_xref="ECOCYC:G6261" /db_xref="EcoGene:EG13247" /db_xref="GeneID:946187" CDS 510865..511797 /gene="ybaS" /locus_tag="b0485" /gene_synonym="ECK0479; JW0474" /function="enzyme; l-glutamine catabolism" /GO_process="GO:0009063 - cellular amino acid catabolic process" /note="putative glutaminase" /codon_start=1 /transl_table=11 /product="glutaminase" /protein_id="NP_415018.1" /db_xref="GI:16128469" /db_xref="ASAP:ABE-0001688" /db_xref="UniProtKB/Swiss-Prot:P77454" /db_xref="ECOCYC:G6261" /db_xref="EcoGene:EG13247" /db_xref="GeneID:946187" /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVA IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI ALELHGGKPLSPLVNAGAIATTSLINAENVEQRWQRILHIQQQLAGEQVALSDEVNQS EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVN PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI AAFSPPLDEDGNSVRGQKMVASVAKQLGYNVFKG" gene 511800..513092 /gene="ybaT" /locus_tag="b0486" /gene_synonym="ECK0480; JW0475" /db_xref="ECOCYC:G6262" /db_xref="EcoGene:EG13248" /db_xref="GeneID:945363" CDS 511800..513092 /gene="ybaT" /locus_tag="b0486" /gene_synonym="ECK0480; JW0475" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009063 - cellular amino acid catabolic process" /note="putative amino acid/amine transport protein" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415019.1" /db_xref="GI:16128470" /db_xref="ASAP:ABE-0001690" /db_xref="UniProtKB/Swiss-Prot:P77400" /db_xref="ECOCYC:G6262" /db_xref="EcoGene:EG13248" /db_xref="GeneID:945363" /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL AVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV" gene 513217..513624 /gene="cueR" /locus_tag="b0487" /gene_synonym="ECK0481; JW0476; ybbI" /db_xref="ECOCYC:G6263" /db_xref="EcoGene:EG13256" /db_xref="GeneID:945332" CDS 513217..513624 /gene="cueR" /locus_tag="b0487" /gene_synonym="ECK0481; JW0476; ybbI" /function="putative transport; Not classified" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator of copper-responsive regulon genes" /protein_id="NP_415020.1" /db_xref="GI:16128471" /db_xref="ASAP:ABE-0001693" /db_xref="UniProtKB/Swiss-Prot:P0A9G4" /db_xref="ECOCYC:G6263" /db_xref="EcoGene:EG13256" /db_xref="GeneID:945332" /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR DQLLALANACPGDDSADCPIIENLSGCCHHRAG" gene complement(513625..514083) /gene="ybbJ" /locus_tag="b0488" /gene_synonym="ECK0482; JW5065" /db_xref="ECOCYC:G6264" /db_xref="EcoGene:EG13257" /db_xref="GeneID:945126" CDS complement(513625..514083) /gene="ybbJ" /locus_tag="b0488" /gene_synonym="ECK0482; JW5065" /codon_start=1 /transl_table=11 /product="inner membrane protein that stimulates the ftsH htpX mutant suppressor activity of QmcA" /protein_id="NP_415021.2" /db_xref="GI:145698226" /db_xref="ASAP:ABE-0001695" /db_xref="UniProtKB/Swiss-Prot:P0AAS3" /db_xref="ECOCYC:G6264" /db_xref="EcoGene:EG13257" /db_xref="GeneID:945126" /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS" gene complement(514080..514997) /gene="qmcA" /locus_tag="b0489" /gene_synonym="ECK0483; JW0478; ybbK" /db_xref="ECOCYC:G6265" /db_xref="EcoGene:EG13258" /db_xref="GeneID:947257" CDS complement(514080..514997) /gene="qmcA" /locus_tag="b0489" /gene_synonym="ECK0483; JW0478; ybbK" /function="putative enzyme; Not classified" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /note="putative protease" /codon_start=1 /transl_table=11 /product="multicopy suppressor of ftsH htpX double mutant; membrane-anchored predicted protease with C-terminal cytoplasmic PHB domain" /protein_id="NP_415022.1" /db_xref="GI:16128473" /db_xref="ASAP:ABE-0001697" /db_xref="UniProtKB/Swiss-Prot:P0AA53" /db_xref="ECOCYC:G6265" /db_xref="EcoGene:EG13258" /db_xref="GeneID:947257" /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM MPLEASSLMGSIAGIAELVKDSANKRTQP" gene 515143..515820 /gene="ybbL" /locus_tag="b0490" /gene_synonym="ECK0484; JW0479" /db_xref="ECOCYC:G6266" /db_xref="EcoGene:EG13259" /db_xref="GeneID:946990" CDS 515143..515820 /gene="ybbL" /locus_tag="b0490" /gene_synonym="ECK0484; JW0479" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="predicted transporter subunit: ATP-binding component of ABC superfamily" /protein_id="NP_415023.1" /db_xref="GI:16128474" /db_xref="ASAP:ABE-0001703" /db_xref="UniProtKB/Swiss-Prot:P77279" /db_xref="ECOCYC:G6266" /db_xref="EcoGene:EG13259" /db_xref="GeneID:946990" /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI FPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ EARYELA" gene 515807..516586 /gene="ybbM" /locus_tag="b0491" /gene_synonym="ECK0485; JW5066" /db_xref="ECOCYC:G6267" /db_xref="EcoGene:EG13260" /db_xref="GeneID:945137" CDS 515807..516586 /gene="ybbM" /locus_tag="b0491" /gene_synonym="ECK0485; JW5066" /function="putative transport; Drug/analog sensitivity" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="putative metal resistance protein" /codon_start=1 /transl_table=11 /product="inner membrane protein, UPF0014 family" /protein_id="NP_415024.4" /db_xref="GI:90111141" /db_xref="ASAP:ABE-0001705" /db_xref="UniProtKB/Swiss-Prot:P77307" /db_xref="ECOCYC:G6267" /db_xref="EcoGene:EG13260" /db_xref="GeneID:945137" /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDILWSVGRAI IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK" repeat_region 516593..516618 /note="REP49 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(516649..517503) /gene="ybbN" /locus_tag="b0492" /gene_synonym="ECK0486; JW5067" /db_xref="ECOCYC:G6268" /db_xref="EcoGene:EG13261" /db_xref="GeneID:947119" CDS complement(516649..517503) /gene="ybbN" /locus_tag="b0492" /gene_synonym="ECK0486; JW5067" /function="putative enzyme; Not classified" /note="putative thioredoxin-like protein" /codon_start=1 /transl_table=11 /product="DnaK co-chaperone, thioredoxin-like protein" /protein_id="NP_415025.4" /db_xref="GI:90111142" /db_xref="ASAP:ABE-0001707" /db_xref="UniProtKB/Swiss-Prot:P77395" /db_xref="ECOCYC:G6268" /db_xref="EcoGene:EG13261" /db_xref="GeneID:947119" /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI RALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR RQLYALLY" gene complement(517564..518373) /gene="ybbO" /locus_tag="b0493" /gene_synonym="ECK0487; JW0482" /db_xref="ECOCYC:G6269" /db_xref="EcoGene:EG13262" /db_xref="GeneID:945337" CDS complement(517564..518373) /gene="ybbO" /locus_tag="b0493" /gene_synonym="ECK0487; JW0482" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415026.1" /db_xref="GI:16128477" /db_xref="ASAP:ABE-0001709" /db_xref="UniProtKB/Swiss-Prot:P0AFP4" /db_xref="ECOCYC:G6269" /db_xref="EcoGene:EG13262" /db_xref="GeneID:945337" /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA GCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG" gene complement(518363..518989) /gene="tesA" /locus_tag="b0494" /gene_synonym="apeA; ECK0488; JW0483; pldC" /db_xref="ECOCYC:EG11542" /db_xref="EcoGene:EG11542" /db_xref="GeneID:945127" CDS complement(518363..518989) /gene="tesA" /locus_tag="b0494" /gene_synonym="apeA; ECK0488; JW0483; pldC" /EC_number="3.1.2.-" /EC_number="3.1.1.5" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /GO_component="GO:0042597 - periplasmic space" /note="acyl-CoA thioesterase I; also functions as protease I" /codon_start=1 /transl_table=11 /product="multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1" /protein_id="NP_415027.1" /db_xref="GI:16128478" /db_xref="ASAP:ABE-0001713" /db_xref="UniProtKB/Swiss-Prot:P0ADA1" /db_xref="ECOCYC:EG11542" /db_xref="EcoGene:EG11542" /db_xref="GeneID:945127" /translation="MMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMS ASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGL RGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDV PLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS" mat_peptide complement(518366..518911) /gene="tesA" /locus_tag="b0494" /gene_synonym="apeA; ECK0488; JW0483; pldC" /product="multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1" /experiment="N-terminus verified by Edman degradation: PMID 1864840,8098033,8432696" gene 518957..519643 /gene="ybbA" /locus_tag="b0495" /gene_synonym="ECK0489; JW0484" /db_xref="ECOCYC:EG11657" /db_xref="EcoGene:EG11657" /db_xref="GeneID:945122" CDS 518957..519643 /gene="ybbA" /locus_tag="b0495" /gene_synonym="ECK0489; JW0484" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="predicted transporter subunit: ATP-binding component of ABC superfamily" /protein_id="NP_415028.1" /db_xref="GI:16128479" /db_xref="ASAP:ABE-0001717" /db_xref="UniProtKB/Swiss-Prot:P0A9T8" /db_xref="ECOCYC:EG11657" /db_xref="EcoGene:EG11657" /db_xref="GeneID:945122" /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR LVNGQLQEEA" gene 519640..522054 /gene="ybbP" /locus_tag="b0496" /gene_synonym="ECK0490; JW0485" /db_xref="ECOCYC:G6270" /db_xref="EcoGene:EG13263" /db_xref="GeneID:945118" CDS 519640..522054 /gene="ybbP" /locus_tag="b0496" /gene_synonym="ECK0490; JW0485" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="predicted ABC transporter permease" /protein_id="NP_415029.1" /db_xref="GI:16128480" /db_xref="ASAP:ABE-0001720" /db_xref="UniProtKB/Swiss-Prot:P77504" /db_xref="ECOCYC:G6270" /db_xref="EcoGene:EG13263" /db_xref="GeneID:945118" /translation="MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLS QQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAV DDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQE PDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLK PEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAI LKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASL WPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVL LLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQP WSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAF LAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNW PPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFP EGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALE VMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSG LVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKAL FRQFAG" gene 522485..526765 /gene="rhsD" /locus_tag="b0497" /gene_synonym="ECK0491; JW0486" /db_xref="ECOCYC:EG10849" /db_xref="EcoGene:EG10849" /db_xref="GeneID:945116" CDS 522485..526765 /gene="rhsD" /locus_tag="b0497" /gene_synonym="ECK0491; JW0486" /function="orf; Transposon-related functions" /note="rhsD protein in rhs element" /codon_start=1 /transl_table=11 /product="rhsD element protein" /protein_id="NP_415030.1" /db_xref="GI:16128481" /db_xref="ASAP:ABE-0001724" /db_xref="UniProtKB/Swiss-Prot:P16919" /db_xref="ECOCYC:EG10849" /db_xref="EcoGene:EG10849" /db_xref="GeneID:945116" /translation="MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMT SGNPVNPLLGAKVLPGETDLALPGPLPFILSRTYSSYRTKTPAPVGVFGPGWKAPSDI RLQLRDDGLILNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWG ALPPDIRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPAPLPPYRVLTGMADRFGR TLTYRREAAGDLAGEITGVTDGAGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSAS AFPDTLPGTEYGPDRGIRLSAVWLMHDPAYPESLPAAPLVRYTYTEAGELLAVYDRSN TQVRAFTYDAQHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYLYEQDRIT VTDSLNRREVLHTEGGAGLKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGL NVVSGDITDITTPDGRETKFYYNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGE TVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTA VHREEGISLYRRYDNRGRLTSVKDAQGRETRYEYNAAGDLTAVITPDGNRSETQYDAW GKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSVFSYDALDRLVQQGGFDGRTQRYH YDLTGKLTQSEDEGLVILWYYDESDRITHRTVNGEPAEQWQYDGHGWLTDISHLSEGH RVAVHYGYDDKGRLTGECQTVENPETGELLWQHETKHAYNEQGLANRVTPDSLPPVEW LTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSMAGSNAAYELTSTYTPAGQLQS QHLNSLVYDRDYGWSDNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYAT DPAGNRLPDPELHPDSTLTVWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDD ERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLS RKPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKAQRRSLAET LQQEGSENGHGVVFPAELVRLLDRLEEEIRADRVSSESRAWLAQCGLTVEQLARQVEP EYTPARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQLNEENPHHVYQPYRLPG QQHDEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMGLLQTW DDARSGACTGGVCGVLSRIIGPSKFDSTADAALDALKETQNRSLCNDMEYSGIVCKDT NGKYFASKAETDNLRKESYPLKRKCPTGTDRVAAYHTHGADSHGDYVDEFFSSSDKNL VRSKDNNLEAFYLATPDGRFEALNNKGEYIFIRNSVPGLSSVCIPYHD" gene 526805..527173 /gene="ybbC" /locus_tag="b0498" /gene_synonym="ECK0492; JW0487" /db_xref="ECOCYC:EG11769" /db_xref="EcoGene:EG11769" /db_xref="GeneID:945115" CDS 526805..527173 /gene="ybbC" /locus_tag="b0498" /gene_synonym="ECK0492; JW0487" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415031.1" /db_xref="GI:16128482" /db_xref="ASAP:ABE-0001726" /db_xref="UniProtKB/Swiss-Prot:P33668" /db_xref="ECOCYC:EG11769" /db_xref="EcoGene:EG11769" /db_xref="GeneID:945115" /translation="MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKY SVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGG VFIIEINKKNGCVLNFLHSK" gene 527176..527883 /gene="ylbH" /locus_tag="b0499" /gene_synonym="ECK0493; JW0488" /pseudo /db_xref="ECOCYC:G6271" /db_xref="EcoGene:EG14327" /db_xref="GeneID:945114" CDS 527176..527883 /gene="ylbH" /locus_tag="b0499" /gene_synonym="ECK0493; JW0488" /note="pseudogene, rhs-like" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001729" /db_xref="UniProtKB/Swiss-Prot:P77759" /db_xref="ECOCYC:G6271" /db_xref="EcoGene:EG14327" /db_xref="GeneID:945114" gene 527864..528354 /gene="ybbD" /locus_tag="b0501" /old_locus_tag="b0500" /gene_synonym="ECK0494; JW0489" /pseudo /db_xref="EcoGene:EG11770" /db_xref="GeneID:945133" CDS 527864..528354 /gene="ybbD" /locus_tag="b0501" /old_locus_tag="b0500" /gene_synonym="ECK0494; JW0489" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001731" /db_xref="UniProtKB/Swiss-Prot:P33669" /db_xref="EcoGene:EG11770" /db_xref="GeneID:945133" gene 528724..528816 /gene="ylbI" /locus_tag="b4632" /gene_synonym="ECK4441" /pseudo /db_xref="EcoGene:EG14349" /db_xref="GeneID:5625558" CDS 528724..528816 /gene="ylbI" /locus_tag="b4632" /gene_synonym="ECK4441" /note="pseudogene, Rhs family" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14349" /db_xref="GeneID:5625558" gene complement(528819..529240) /gene="ylbG" /locus_tag="b0502" /gene_synonym="ECK0495; JW5880" /pseudo /db_xref="ECOCYC:G6273" /db_xref="EcoGene:EG14285" /db_xref="GeneID:946803" CDS complement(join(528819..528884,528884..529240)) /gene="ylbG" /locus_tag="b0502" /gene_synonym="ECK0495; JW5880" /note="pseudogene, DNA-binding transcriptional regulator homology" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001736" /db_xref="UniProtKB/Swiss-Prot:P77688" /db_xref="ECOCYC:G6273" /db_xref="EcoGene:EG14285" /db_xref="GeneID:946803" gene complement(529356..530450) /gene="selU" /locus_tag="b0503" /gene_synonym="ECK0496; JW0491; selE; ybbB" /db_xref="ECOCYC:EG11768" /db_xref="EcoGene:EG11768" /db_xref="GeneID:947063" CDS complement(529356..530450) /gene="selU" /locus_tag="b0503" /gene_synonym="ECK0496; JW0491; selE; ybbB" /function="phenotype; Surface polysaccharides & antigens" /note="putative capsule anchoring protein" /codon_start=1 /transl_table=11 /product="tRNA 2-selenouridine synthase, selenophosphate-dependent" /protein_id="NP_415036.1" /db_xref="GI:16128487" /db_xref="ASAP:ABE-0001740" /db_xref="UniProtKB/Swiss-Prot:P33667" /db_xref="ECOCYC:EG11768" /db_xref="EcoGene:EG11768" /db_xref="GeneID:947063" /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEHGAMPAAINLPLMN NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQ RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDES RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ EYCEYLHHGLSAIKRRLGLQRYNELAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYD PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR" gene complement(530519..531445) /gene="allS" /locus_tag="b0504" /gene_synonym="ECK0497; glxA1; JW0492; ybbS" /db_xref="ECOCYC:G6274" /db_xref="EcoGene:EG13267" /db_xref="GeneID:945139" CDS complement(530519..531445) /gene="allS" /locus_tag="b0504" /gene_synonym="ECK0497; glxA1; JW0492; ybbS" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator LYSR-type" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator of the allD operon" /protein_id="NP_415037.1" /db_xref="GI:16128488" /db_xref="ASAP:ABE-0001742" /db_xref="UniProtKB/Swiss-Prot:P0ACR0" /db_xref="ECOCYC:G6274" /db_xref="EcoGene:EG13267" /db_xref="GeneID:945139" /translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLL YNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFS LDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQK EIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKF GSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS" gene 531675..532157 /gene="allA" /locus_tag="b0505" /gene_synonym="ECK0498; glxA2; JW0493; ybbT" /db_xref="ECOCYC:G6275" /db_xref="EcoGene:EG13615" /db_xref="GeneID:945141" CDS 531675..532157 /gene="allA" /locus_tag="b0505" /gene_synonym="ECK0498; glxA2; JW0493; ybbT" /EC_number="3.5.3.19" /GO_process="GO:0009442 - allantoin assimilation pathway; GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="ureidoglycolate hydrolase" /protein_id="NP_415038.1" /db_xref="GI:16128489" /db_xref="ASAP:ABE-0001747" /db_xref="UniProtKB/Swiss-Prot:P77731" /db_xref="ECOCYC:G6275" /db_xref="EcoGene:EG13615" /db_xref="GeneID:945141" /translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV EILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA" gene 532235..533050 /gene="allR" /locus_tag="b0506" /gene_synonym="ECK0499; glxA3; JW0494; ybbU" /db_xref="ECOCYC:G6276" /db_xref="EcoGene:EG13616" /db_xref="GeneID:945333" CDS 532235..533050 /gene="allR" /locus_tag="b0506" /gene_synonym="ECK0499; glxA3; JW0494; ybbU" /function="putative regulator; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor for all (allantoin) and gcl (glyoxylate) operons; glyoxylate-induced" /protein_id="NP_415039.1" /db_xref="GI:16128490" /db_xref="ASAP:ABE-0001750" /db_xref="UniProtKB/Swiss-Prot:P0ACN4" /db_xref="ECOCYC:G6276" /db_xref="EcoGene:EG13616" /db_xref="GeneID:945333" /translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS DISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVA GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI ASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP" gene 533140..534921 /gene="gcl" /locus_tag="b0507" /gene_synonym="ECK0500; JW0495" /db_xref="ECOCYC:EG11583" /db_xref="EcoGene:EG11583" /db_xref="GeneID:945394" CDS 533140..534921 /gene="gcl" /locus_tag="b0507" /gene_synonym="ECK0500; JW0495" /EC_number="4.1.1.47" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_process="GO:0009442 - allantoin assimilation pathway; GO:0009441 - glycolate metabolic process" /codon_start=1 /transl_table=11 /product="glyoxylate carboligase" /protein_id="NP_415040.1" /db_xref="GI:16128491" /db_xref="ASAP:ABE-0001754" /db_xref="UniProtKB/Swiss-Prot:P0AEP7" /db_xref="ECOCYC:EG11583" /db_xref="EcoGene:EG11583" /db_xref="GeneID:945394" /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR HILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINAD AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ EMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTT IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQ FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE LDNVMEFEDIADNAADAPTETCFMHYE" mat_peptide 533143..534918 /gene="gcl" /locus_tag="b0507" /gene_synonym="ECK0500; JW0495" /product="glyoxylate carboligase" /experiment="N-terminus verified by Edman degradation: PMID 8440684" gene 534934..535710 /gene="hyi" /locus_tag="b0508" /gene_synonym="ECK0501; gip; JW0496; ybbG" /db_xref="ECOCYC:G6277" /db_xref="EcoGene:EG11584" /db_xref="GeneID:946186" CDS 534934..535710 /gene="hyi" /locus_tag="b0508" /gene_synonym="ECK0501; gip; JW0496; ybbG" /EC_number="5.3.1.22" /function="phenotype; Not classified" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="hydroxypyruvate isomerase" /protein_id="NP_415041.1" /db_xref="GI:16128492" /db_xref="ASAP:ABE-0001756" /db_xref="UniProtKB/Swiss-Prot:P30147" /db_xref="ECOCYC:G6277" /db_xref="EcoGene:EG11584" /db_xref="GeneID:946186" /translation="MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEE LKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKI NCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQ ALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGE INYDYLFKVIENSDYNGWVGCEYKPQTTTEAGLRWMDPYR" gene 535810..536688 /gene="glxR" /locus_tag="b0509" /gene_synonym="ECK0502; glxB1; JW0497; ybbQ" /db_xref="ECOCYC:G6278" /db_xref="EcoGene:EG13265" /db_xref="GeneID:945146" CDS 535810..536688 /gene="glxR" /locus_tag="b0509" /gene_synonym="ECK0502; glxB1; JW0497; ybbQ" /EC_number="1.1.1.60" /function="putative enzyme; Not classified" /GO_process="GO:0009442 - allantoin assimilation pathway; GO:0016052 - carbohydrate catabolic process; GO:0009441 - glycolate metabolic process" /codon_start=1 /transl_table=11 /product="tartronate semialdehyde reductase, NADH-dependent" /protein_id="NP_415042.1" /db_xref="GI:16128493" /db_xref="ASAP:ABE-0001759" /db_xref="UniProtKB/Swiss-Prot:P77161" /db_xref="ECOCYC:G6278" /db_xref="EcoGene:EG13265" /db_xref="GeneID:945146" /translation="MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAV SVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKR FARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVG GNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHG ERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDH SALVQALELMANHKLA" gene 536857..538311 /gene="ybbW" /locus_tag="b0511" /gene_synonym="allP; ECK0504; glxB2; JW0499" /db_xref="ECOCYC:G6280" /db_xref="EcoGene:EG13618" /db_xref="GeneID:945138" CDS 536857..538311 /gene="ybbW" /locus_tag="b0511" /gene_synonym="allP; ECK0504; glxB2; JW0499" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted allantoin transporter" /protein_id="NP_415044.4" /db_xref="GI:90111144" /db_xref="ASAP:ABE-0001764" /db_xref="UniProtKB/Swiss-Prot:P75712" /db_xref="ECOCYC:G6280" /db_xref="EcoGene:EG13618" /db_xref="GeneID:945138" /translation="MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVP NYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVR GALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLI TFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSG IQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFA VAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAG YQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMM AHYFVVMRGQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIHFMEPLS RVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG" gene 538371..539732 /gene="allB" /locus_tag="b0512" /gene_synonym="ECK0505; glxB3; JW0500; ybbX" /db_xref="ECOCYC:G6281" /db_xref="EcoGene:EG13619" /db_xref="GeneID:945134" CDS 538371..539732 /gene="allB" /locus_tag="b0512" /gene_synonym="ECK0505; glxB3; JW0500; ybbX" /EC_number="3.5.2.5" /function="putative enzyme; Not classified" /GO_process="GO:0009442 - allantoin assimilation pathway; GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="allantoinase" /protein_id="NP_415045.1" /db_xref="GI:16128496" /db_xref="ASAP:ABE-0001768" /db_xref="UniProtKB/Swiss-Prot:P77671" /db_xref="ECOCYC:G6281" /db_xref="EcoGene:EG13619" /db_xref="GeneID:945134" /translation="MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVM DASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDR ASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDND FRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVF TEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTD QFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGG IAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQ PNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILK HQQ" gene 539789..541090 /gene="ybbY" /locus_tag="b0513" /gene_synonym="ECK0506; glxB4; JW0501" /db_xref="ECOCYC:G6282" /db_xref="EcoGene:EG13620" /db_xref="GeneID:945131" CDS 539789..541090 /gene="ybbY" /locus_tag="b0513" /gene_synonym="ECK0506; glxB4; JW0501" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="predicted uracil/xanthine transporter" /protein_id="NP_415046.4" /db_xref="GI:90111145" /db_xref="ASAP:ABE-0001771" /db_xref="UniProtKB/Swiss-Prot:P77328" /db_xref="ECOCYC:G6282" /db_xref="EcoGene:EG13620" /db_xref="GeneID:945131" /translation="MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLL TLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATS LAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFG IADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSH SLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTR YRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVP ALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMA LPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE" gene 541112..542257 /gene="glxK" /locus_tag="b0514" /gene_synonym="ECK0507; glxB5; JW0502; ybbZ" /db_xref="ECOCYC:G6283" /db_xref="EcoGene:EG13621" /db_xref="GeneID:945129" CDS 541112..542257 /gene="glxK" /locus_tag="b0514" /gene_synonym="ECK0507; glxB5; JW0502; ybbZ" /EC_number="2.7.1.31" /GO_process="GO:0009442 - allantoin assimilation pathway; GO:0016052 - carbohydrate catabolic process; GO:0009441 - glycolate metabolic process" /codon_start=1 /transl_table=11 /product="glycerate kinase II" /protein_id="NP_415047.1" /db_xref="GI:16128498" /db_xref="ASAP:ABE-0001773" /db_xref="UniProtKB/Swiss-Prot:P77364" /db_xref="ECOCYC:G6283" /db_xref="EcoGene:EG13621" /db_xref="GeneID:945129" /translation="MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADG GEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPE KRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQA LAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEM VEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAV NLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVH QYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN" repeat_region 542311..542407 /note="RIP50 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(542485..543270) /gene="ylbA" /locus_tag="b0515" /gene_synonym="ECK0508; glxB6; JW0503" /db_xref="ECOCYC:G6284" /db_xref="EcoGene:EG13622" /db_xref="GeneID:945149" CDS complement(542485..543270) /gene="ylbA" /locus_tag="b0515" /gene_synonym="ECK0508; glxB6; JW0503" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415048.1" /db_xref="GI:16128499" /db_xref="ASAP:ABE-0001775" /db_xref="UniProtKB/Swiss-Prot:P75713" /db_xref="ECOCYC:G6284" /db_xref="EcoGene:EG13622" /db_xref="GeneID:945149" /translation="MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFEN CDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFA LSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYE GMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI" gene complement(543281..544516) /gene="allC" /locus_tag="b0516" /gene_synonym="ECK0509; glxB7; JW0504; ylbB" /db_xref="ECOCYC:G6285" /db_xref="EcoGene:EG13623" /db_xref="GeneID:945150" CDS complement(543281..544516) /gene="allC" /locus_tag="b0516" /gene_synonym="ECK0509; glxB7; JW0504; ylbB" /EC_number="3.5.3.4" /function="phenotype; Not classified" /GO_process="GO:0009442 - allantoin assimilation pathway; GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="allantoate amidohydrolase" /protein_id="NP_415049.1" /db_xref="GI:16128500" /db_xref="ASAP:ABE-0001777" /db_xref="UniProtKB/Swiss-Prot:P77425" /db_xref="ECOCYC:G6285" /db_xref="EcoGene:EG13623" /db_xref="GeneID:945150" /translation="MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFK KRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWL AIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNS FVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTV TLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNV VPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKEL VATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITD LAEGVKTLALMLYQLAWQK" gene complement(544538..545587) /gene="allD" /locus_tag="b0517" /gene_synonym="ECK0510; glxB8; JW0505; ylbC" /db_xref="ECOCYC:G6286" /db_xref="EcoGene:EG13624" /db_xref="GeneID:948342" CDS complement(544538..545587) /gene="allD" /locus_tag="b0517" /gene_synonym="ECK0510; glxB8; JW0505; ylbC" /EC_number="1.1.1.154" /function="putative enzyme; Not classified" /GO_process="GO:0009442 - allantoin assimilation pathway; GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="ureidoglycolate dehydrogenase" /protein_id="NP_415050.1" /db_xref="GI:16128501" /db_xref="ASAP:ABE-0001780" /db_xref="UniProtKB/Swiss-Prot:P77555" /db_xref="ECOCYC:G6286" /db_xref="EcoGene:EG13624" /db_xref="GeneID:948342" /translation="MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSH GAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQ QNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLA FAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALL PAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSS ELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISD ALYNTSYETKNPFAQ" gene 545904..547571 /gene="fdrA" /locus_tag="b0518" /gene_synonym="ECK0511; JW0506; ylbD" /db_xref="ECOCYC:G6287" /db_xref="EcoGene:EG13399" /db_xref="GeneID:946298" CDS 545904..547571 /gene="fdrA" /locus_tag="b0518" /gene_synonym="ECK0511; JW0506; ylbD" /function="transport; Protein, peptide secretion" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="involved in protein transport; multicopy suppressor of dominant negative ftsH mutants" /codon_start=1 /transl_table=11 /product="multicopy suppressor of dominant negative ftsH mutations; predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415051.1" /db_xref="GI:16128502" /db_xref="ASAP:ABE-0001784" /db_xref="UniProtKB/Swiss-Prot:Q47208" /db_xref="ECOCYC:G6287" /db_xref="EcoGene:EG13399" /db_xref="GeneID:946298" /translation="MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKA LLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQAL TQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLK TRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGE GITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMK ATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFIC GLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMI DPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYA IATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLL ENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ" gene 547581..548839 /gene="ylbE" /locus_tag="b4572" /old_locus_tag="b0519" /old_locus_tag="b4507" /gene_synonym="ECK0512; JW0507; JW0508" /pseudo /db_xref="EcoGene:EG13398" /db_xref="GeneID:4056025" CDS join(547581..547832,547832..548839) /gene="ylbE" /locus_tag="b4572" /old_locus_tag="b0519" /old_locus_tag="b4507" /gene_synonym="ECK0512; JW0507; JW0508" /note="predicted protein, C-ter fragment (pseudogene)" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001787" /db_xref="ASAP:ABE-0285028" /db_xref="ASAP:ABE-0285105" /db_xref="UniProtKB/Swiss-Prot:P77129" /db_xref="EcoGene:EG13398" /db_xref="GeneID:4056025" gene 548850..549665 /gene="ylbF" /locus_tag="b0520" /gene_synonym="ECK0513; JW0509" /db_xref="ECOCYC:G6289" /db_xref="EcoGene:EG13626" /db_xref="GeneID:945195" CDS 548850..549665 /gene="ylbF" /locus_tag="b0520" /gene_synonym="ECK0513; JW0509" /function="putative enzyme; Not classified" /note="putative carboxylase" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415053.1" /db_xref="GI:16128504" /db_xref="ASAP:ABE-0001789" /db_xref="UniProtKB/Swiss-Prot:P0AAS5" /db_xref="ECOCYC:G6289" /db_xref="EcoGene:EG13626" /db_xref="GeneID:945195" /translation="MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP AHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLG KGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQ GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP" gene 549662..550555 /gene="ybcF" /locus_tag="b0521" /gene_synonym="arcC; ECK0514; JW0510" /db_xref="ECOCYC:EG12384" /db_xref="EcoGene:EG12384" /db_xref="GeneID:944972" CDS 549662..550555 /gene="ybcF" /locus_tag="b0521" /gene_synonym="arcC; ECK0514; JW0510" /function="putative enzyme; Not classified" /GO_process="GO:0006526 - arginine biosynthetic process; GO:0006221 - pyrimidine nucleotide biosynthetic process" /note="putative carbamate kinase" /codon_start=1 /transl_table=11 /product="predicted carbamate kinase" /protein_id="NP_415054.1" /db_xref="GI:16128505" /db_xref="ASAP:ABE-0001791" /db_xref="UniProtKB/Swiss-Prot:P37306" /db_xref="ECOCYC:EG12384" /db_xref="EcoGene:EG12384" /db_xref="GeneID:944972" /translation="MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYR LAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVT TVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQP RKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGL VILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPNVTAVSGYVRSRGKPAW IGALSRIEETLAGEAGTCISL" repeat_region 550577..550733 /note="REP52 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(550750..551817) /gene="purK" /locus_tag="b0522" /gene_synonym="ECK0515; JW0511; purE2" /db_xref="ECOCYC:EG10796" /db_xref="EcoGene:EG10796" /db_xref="GeneID:945153" CDS complement(550750..551817) /gene="purK" /locus_tag="b0522" /gene_synonym="ECK0515; JW0511; purE2" /EC_number="4.1.1.21" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 1534690" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006164 - purine nucleotide biosynthetic process" /note="phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit" /codon_start=1 /transl_table=11 /product="N5-carboxyaminoimidazole ribonucleotide synthase" /protein_id="NP_415055.1" /db_xref="GI:16128506" /db_xref="ASAP:ABE-0001794" /db_xref="UniProtKB/Swiss-Prot:P09029" /db_xref="ECOCYC:EG10796" /db_xref="EcoGene:EG10796" /db_xref="GeneID:945153" /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS VITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAE RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSG EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG YVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV NNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA LIPLLPPEYASGVIWAQSKFG" gene complement(551814..552323) /gene="purE" /locus_tag="b0523" /gene_synonym="ade; ade3; ECK0516; JW0512; Pur2" /db_xref="ECOCYC:EG10793" /db_xref="EcoGene:EG10793" /db_xref="GeneID:949031" CDS complement(551814..552323) /gene="purE" /locus_tag="b0523" /gene_synonym="ade; ade3; ECK0516; JW0512; Pur2" /EC_number="4.1.1.21" /function="enzyme; Purine ribonucleotide biosynthesis" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006164 - purine nucleotide biosynthetic process" /note="phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit" /codon_start=1 /transl_table=11 /product="N5-carboxyaminoimidazole ribonucleotide mutase" /protein_id="NP_415056.1" /db_xref="GI:16128507" /db_xref="ASAP:ABE-0001796" /db_xref="UniProtKB/Swiss-Prot:P0AG18" /db_xref="ECOCYC:EG10793" /db_xref="EcoGene:EG10793" /db_xref="GeneID:949031" /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL ENPDPRGAA" mat_peptide complement(551817..552320) /gene="purE" /locus_tag="b0523" /gene_synonym="ade; ade3; ECK0516; JW0512; Pur2" /product="N5-carboxyaminoimidazole ribonucleotide mutase" /experiment="N-terminus verified by Edman degradation: PMID 1534690" gene complement(552441..553163) /gene="lpxH" /locus_tag="b0524" /gene_synonym="ECK0517; JW0513; ybbF" /db_xref="ECOCYC:EG12666" /db_xref="EcoGene:EG12666" /db_xref="GeneID:949053" CDS complement(552441..553163) /gene="lpxH" /locus_tag="b0524" /gene_synonym="ECK0517; JW0513; ybbF" /EC_number="3.6.1.-" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-2,3-diacylglucosamine pyrophosphatase" /protein_id="NP_415057.1" /db_xref="GI:16128508" /db_xref="ASAP:ABE-0001804" /db_xref="UniProtKB/Swiss-Prot:P43341" /db_xref="ECOCYC:EG12666" /db_xref="EcoGene:EG12666" /db_xref="GeneID:949053" /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE AWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANS KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA WHTEGSMVKVTADDVELIHFPF" gene complement(553166..553660) /gene="ppiB" /locus_tag="b0525" /gene_synonym="ECK0518; JW0514" /db_xref="ECOCYC:EG10758" /db_xref="EcoGene:EG10758" /db_xref="GeneID:949038" CDS complement(553166..553660) /gene="ppiB" /locus_tag="b0525" /gene_synonym="ECK0518; JW0514" /EC_number="5.2.1.8" /function="enzyme; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase B (rotamase B)" /protein_id="NP_415058.1" /db_xref="GI:16128509" /db_xref="ASAP:ABE-0001806" /db_xref="UniProtKB/Swiss-Prot:P23869" /db_xref="ECOCYC:EG10758" /db_xref="EcoGene:EG10758" /db_xref="GeneID:949038" /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV VDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV TVSE" gene 553834..555219 /gene="cysS" /locus_tag="b0526" /gene_synonym="ECK0519; JW0515" /db_xref="ECOCYC:EG10196" /db_xref="EcoGene:EG10196" /db_xref="GeneID:946969" CDS 553834..555219 /gene="cysS" /locus_tag="b0526" /gene_synonym="ECK0519; JW0515" /EC_number="6.1.1.16" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 2014166" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="cysteine tRNA synthetase" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /protein_id="NP_415059.1" /db_xref="GI:16128510" /db_xref="ASAP:ABE-0001810" /db_xref="UniProtKB/Swiss-Prot:P21888" /db_xref="ECOCYC:EG10196" /db_xref="EcoGene:EG10196" /db_xref="GeneID:946969" /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDA LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE DGPQGTTWRRK" repeat_region 555230..555255 /note="REP53 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(555255..555776) /gene="ybcI" /locus_tag="b0527" /gene_synonym="ECK0520; JW0516" /db_xref="ECOCYC:EG12708" /db_xref="EcoGene:EG12708" /db_xref="GeneID:945155" CDS complement(555255..555776) /gene="ybcI" /locus_tag="b0527" /gene_synonym="ECK0520; JW0516" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF457 family" /protein_id="NP_415060.1" /db_xref="GI:16128511" /db_xref="ASAP:ABE-0001812" /db_xref="UniProtKB/Swiss-Prot:P45570" /db_xref="ECOCYC:EG12708" /db_xref="EcoGene:EG12708" /db_xref="GeneID:945155" /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSL LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP GMLLMGMLWWRRR" gene complement(555884..556096) /gene="ybcJ" /locus_tag="b0528" /gene_synonym="ECK0521; JW5070" /db_xref="ECOCYC:EG12879" /db_xref="EcoGene:EG12879" /db_xref="GeneID:945158" CDS complement(555884..556096) /gene="ybcJ" /locus_tag="b0528" /gene_synonym="ECK0521; JW5070" /codon_start=1 /transl_table=11 /product="Ribosome-associated protein; predicted RNA-binding protein" /protein_id="NP_415061.2" /db_xref="GI:90111146" /db_xref="ASAP:ABE-0001816" /db_xref="UniProtKB/Swiss-Prot:P0AAS7" /db_xref="ECOCYC:EG12879" /db_xref="EcoGene:EG12879" /db_xref="GeneID:945158" /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA VETRKRCKIVAGQTVSFAGHSVQVVA" gene complement(556098..556964) /gene="folD" /locus_tag="b0529" /gene_synonym="ads; ECK0522; JW0518" /db_xref="ECOCYC:EG10328" /db_xref="EcoGene:EG10328" /db_xref="GeneID:945221" CDS complement(556098..556964) /gene="folD" /locus_tag="b0529" /gene_synonym="ads; ECK0522; JW0518" /EC_number="1.5.1.5" /EC_number="3.5.4.9" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /GO_process="GO:0046656 - folic acid biosynthetic process" /note="5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase" /codon_start=1 /transl_table=11 /product="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" /protein_id="NP_415062.1" /db_xref="GI:16128513" /db_xref="ASAP:ABE-0001818" /db_xref="UniProtKB/Swiss-Prot:P24186" /db_xref="ECOCYC:EG10328" /db_xref="EcoGene:EG10328" /db_xref="GeneID:945221" /translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLP AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL QACVEYHDPQDE" mat_peptide complement(556101..556961) /gene="folD" /locus_tag="b0529" /gene_synonym="ads; ECK0522; JW0518" /product="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" /experiment="N-terminus verified by Edman degradation: PMID 1748668" gene 557435..557977 /gene="sfmA" /locus_tag="b0530" /gene_synonym="ECK0523; fimA; JW0519" /db_xref="ECOCYC:G6290" /db_xref="EcoGene:EG13881" /db_xref="GeneID:945522" CDS 557435..557977 /gene="sfmA" /locus_tag="b0530" /gene_synonym="ECK0523; fimA; JW0519" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415063.4" /db_xref="GI:90111147" /db_xref="ASAP:ABE-0001825" /db_xref="UniProtKB/Swiss-Prot:P0ABW5" /db_xref="ECOCYC:G6290" /db_xref="EcoGene:EG13881" /db_xref="GeneID:945522" /translation="MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVN TDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAIND NLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGT GTSASAGQANADATFIMRYE" gene 558197..558889 /gene="sfmC" /locus_tag="b0531" /gene_synonym="ECK0524; fimC; JW0520" /db_xref="ECOCYC:G6291" /db_xref="EcoGene:EG13882" /db_xref="GeneID:945367" CDS 558197..558889 /gene="sfmC" /locus_tag="b0531" /gene_synonym="ECK0524; fimC; JW0520" /function="putative factor; Not classified" /GO_process="GO:0006457 - protein folding" /note="putative chaperone" /codon_start=1 /transl_table=11 /product="pilin chaperone, periplasmic" /protein_id="NP_415064.1" /db_xref="GI:16128515" /db_xref="ASAP:ABE-0001828" /db_xref="UniProtKB/Swiss-Prot:P77249" /db_xref="ECOCYC:G6291" /db_xref="EcoGene:EG13882" /db_xref="GeneID:945367" /translation="MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTA VWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAAD RESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDY GSVTPVREVNLN" gene 558920..561523 /gene="sfmD" /locus_tag="b0532" /gene_synonym="ECK0525; fimD; JW0521" /db_xref="ECOCYC:G6292" /db_xref="EcoGene:EG13883" /db_xref="GeneID:945160" CDS 558920..561523 /gene="sfmD" /locus_tag="b0532" /gene_synonym="ECK0525; fimD; JW0521" /function="putative membrane; Not classified" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative outer membrane protein, export function" /codon_start=1 /transl_table=11 /product="predicted outer membrane export usher protein" /protein_id="NP_415065.1" /db_xref="GI:16128516" /db_xref="ASAP:ABE-0001830" /db_xref="UniProtKB/Swiss-Prot:P77468" /db_xref="ECOCYC:G6292" /db_xref="EcoGene:EG13883" /db_xref="GeneID:945160" /translation="MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFL LENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMP CFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIAL LSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSW NYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDN MYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDV TIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSPFFFQGTALGGL PQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADASRHEGDSIRFL YAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDGEHRDEPIIVNYHNL RFSRKDRLQLNVSQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSLSF SWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSWLA GVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGGGYNYDRDQHDVNWQL SGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMLYATVYRY NRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPFGS LVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQAVT VISAVCTHPGS" gene 561559..562542 /gene="sfmH" /locus_tag="b0533" /gene_synonym="ECK0526; fimH; JW5071" /db_xref="ECOCYC:G6293" /db_xref="EcoGene:EG13884" /db_xref="GeneID:945407" CDS 561559..562542 /gene="sfmH" /locus_tag="b0533" /gene_synonym="ECK0526; fimH; JW5071" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="involved in fimbrial asembly" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415066.2" /db_xref="GI:145698227" /db_xref="ASAP:ABE-0001832" /db_xref="UniProtKB/Swiss-Prot:P75715" /db_xref="ECOCYC:G6293" /db_xref="EcoGene:EG13884" /db_xref="GeneID:945407" /translation="MAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQ IVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSL VDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMF TVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGN RPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPI TPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ" gene 562553..563068 /gene="sfmF" /locus_tag="b0534" /gene_synonym="ECK0527; fimF; JW5072; ybcG" /db_xref="ECOCYC:EG12388" /db_xref="EcoGene:EG12388" /db_xref="GeneID:944977" CDS 562553..563068 /gene="sfmF" /locus_tag="b0534" /gene_synonym="ECK0527; fimF; JW5072; ybcG" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415067.1" /db_xref="GI:16128518" /db_xref="ASAP:ABE-0001834" /db_xref="UniProtKB/Swiss-Prot:P38052" /db_xref="ECOCYC:EG12388" /db_xref="EcoGene:EG12388" /db_xref="GeneID:944977" /translation="MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNT ADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLAL DDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVA KADAIFMINYN" gene complement(563071..563703) /gene="fimZ" /locus_tag="b0535" /gene_synonym="ECK0528; JW5073; ybcA" /db_xref="ECOCYC:EG11103" /db_xref="EcoGene:EG11103" /db_xref="GeneID:947079" CDS complement(563071..563703) /gene="fimZ" /locus_tag="b0535" /gene_synonym="ECK0528; JW5073; ybcA" /function="putative regulator; Surface structures" /GO_component="GO:0009289 - pilus" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="fimbrial Z protein; probable signal transducer" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415068.1" /db_xref="GI:16128519" /db_xref="ASAP:ABE-0001836" /db_xref="UniProtKB/Swiss-Prot:P0AEL8" /db_xref="ECOCYC:EG11103" /db_xref="EcoGene:EG11103" /db_xref="GeneID:947079" /translation="MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY LRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANG FVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRY LVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI" gene 563946..564022 /gene="argU" /locus_tag="b0536" /gene_synonym="argW; dnaY; ECK0529; fimU; JWR0010; pin" /db_xref="ECOCYC:EG30014" /db_xref="EcoGene:EG30014" /db_xref="GeneID:945161" tRNA 563946..564022 /gene="argU" /locus_tag="b0536" /gene_synonym="argW; dnaY; ECK0529; fimU; JWR0010; pin" /product="tRNA-Arg" /note="anticodon: UCU" /db_xref="ASAP:ABE-0001840" /db_xref="ECOCYC:EG30014" /db_xref="EcoGene:EG30014" /db_xref="GeneID:945161" misc_feature 564025..585326 /note="cryptic prophage DLP12" gene complement(564038..565201) /gene="intD" /locus_tag="b0537" /gene_synonym="ECK0530; int; JW0525" /db_xref="ECOCYC:EG10507" /db_xref="EcoGene:EG10507" /db_xref="GeneID:947162" CDS complement(564038..565201) /gene="intD" /locus_tag="b0537" /gene_synonym="ECK0530; int; JW0525" /function="IS, phage, Tn; Phage or Prophage Related" /note="prophage DLP12 integrase" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted integrase" /protein_id="NP_415069.1" /db_xref="GI:16128520" /db_xref="ASAP:ABE-0001842" /db_xref="UniProtKB/Swiss-Prot:P24218" /db_xref="ECOCYC:EG10507" /db_xref="EcoGene:EG10507" /db_xref="GeneID:947162" /translation="MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAE LWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAK IYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAA ERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSN IINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKA AKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVL QEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA" gene complement(565081..565302) /gene="xisD" /locus_tag="b4633" /gene_synonym="ECK4435; ybcB" /pseudo /db_xref="EcoGene:EG12348" /db_xref="GeneID:5625559" CDS complement(565081..565302) /gene="xisD" /locus_tag="b4633" /gene_synonym="ECK4435; ybcB" /note="pseudogene, exisionase in defective prophage DLP12;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG12348" /db_xref="GeneID:5625559" gene complement(565321..565599) /gene="exoD" /locus_tag="b0539" /gene_synonym="ECK0531; JW0526; ybcC" /pseudo /db_xref="ECOCYC:G6295" /db_xref="EcoGene:EG12349" /db_xref="GeneID:947902" CDS complement(565321..565599) /gene="exoD" /locus_tag="b0539" /gene_synonym="ECK0531; JW0526; ybcC" /note="pseudogene, DLP12 prophage; predicted exonuclease;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001850" /db_xref="ECOCYC:G6295" /db_xref="EcoGene:EG12349" /db_xref="GeneID:947902" gene 565599..565910 /gene="peaD" /locus_tag="b4508" /gene_synonym="ECK0532; JW0527; ybcD" /pseudo /db_xref="EcoGene:EG12350" /db_xref="GeneID:945299" CDS 565599..565910 /gene="peaD" /locus_tag="b4508" /gene_synonym="ECK0532; JW0527; ybcD" /GO_component="GO:0005737 - cytoplasm" /note="DLP12 prophage; predicted replication protein fragment (pseudogene);Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285029" /db_xref="EcoGene:EG12350" /db_xref="GeneID:945299" gene join(565907..565999,567258..567470) /gene="renD" /locus_tag="b0542" /gene_synonym="ECK0533; JW0530; ybcE" /pseudo /db_xref="ECOCYC:G6298" /db_xref="EcoGene:EG12351" /db_xref="GeneID:945024" CDS join(565907..565999,567258..567470) /gene="renD" /locus_tag="b0542" /gene_synonym="ECK0533; JW0530; ybcE" /note="pseudogene, DLP12 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001860" /db_xref="ECOCYC:G6298" /db_xref="EcoGene:EG12351" /db_xref="GeneID:945024" repeat_region 566000..567257 /mobile_element="insertion sequence:IS3C" gene 566065..566364 /gene="insE" /locus_tag="b0540" /gene_synonym="ECK0298" /db_xref="ECOCYC:G6296" /db_xref="EcoGene:EG40005" /db_xref="GeneID:945759" CDS 566065..566364 /gene="insE" /locus_tag="b0540" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="NP_415072.2" /db_xref="GI:226524703" /db_xref="ASAP:ABE-0001855" /db_xref="ECOCYC:G6296" /db_xref="EcoGene:EG40005" /db_xref="GeneID:945759" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 566361..567227 /gene="insF" /locus_tag="b0541" /gene_synonym="ECK0299" /db_xref="ECOCYC:G6297" /db_xref="EcoGene:EG40006" /db_xref="GeneID:947988" CDS 566361..567227 /gene="insF" /locus_tag="b0541" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="NP_415073.1" /db_xref="GI:16128524" /db_xref="ASAP:ABE-0001857" /db_xref="ECOCYC:G6297" /db_xref="EcoGene:EG40006" /db_xref="GeneID:947988" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene 567538..567870 /gene="emrE" /locus_tag="b0543" /gene_synonym="eb; ECK0534; JW0531; mvrC" /db_xref="ECOCYC:EG10629" /db_xref="EcoGene:EG10629" /db_xref="GeneID:948442" CDS 567538..567870 /gene="emrE" /locus_tag="b0543" /gene_synonym="eb; ECK0534; JW0531; mvrC" /function="transport; Drug/analog sensitivity; Phage or Prophage Related" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="methylviologen resistance" /codon_start=1 /transl_table=11 /product="DLP12 prophage; multidrug resistance protein" /protein_id="NP_415075.1" /db_xref="GI:16128526" /db_xref="ASAP:ABE-0001863" /db_xref="UniProtKB/Swiss-Prot:P23895" /db_xref="ECOCYC:EG10629" /db_xref="EcoGene:EG10629" /db_xref="GeneID:948442" /translation="MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASF WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIIN LLSRSTPH" gene 568125..569651 /gene="ybcK" /locus_tag="b0544" /gene_synonym="ECK0535; JW0532" /db_xref="ECOCYC:G6300" /db_xref="EcoGene:EG13627" /db_xref="GeneID:945166" CDS 568125..569651 /gene="ybcK" /locus_tag="b0544" /gene_synonym="ECK0535; JW0532" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted recombinase" /protein_id="NP_415076.1" /db_xref="GI:16128527" /db_xref="ASAP:ABE-0001866" /db_xref="UniProtKB/Swiss-Prot:P77698" /db_xref="ECOCYC:G6300" /db_xref="EcoGene:EG13627" /db_xref="GeneID:945166" /translation="MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTIT YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLK LILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKR QDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN DHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDL FYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLI VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELC RTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIYF" gene 570116..570667 /gene="ybcL" /locus_tag="b0545" /gene_synonym="ECK0536; JW0533" /db_xref="ECOCYC:G6301" /db_xref="EcoGene:EG13628" /db_xref="GeneID:945165" CDS 570116..570667 /gene="ybcL" /locus_tag="b0545" /gene_synonym="ECK0536; JW0533" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; secreted protein, UPF0098 family" /protein_id="NP_415077.1" /db_xref="GI:16128528" /db_xref="ASAP:ABE-0001869" /db_xref="UniProtKB/Swiss-Prot:P77368" /db_xref="ECOCYC:G6301" /db_xref="EcoGene:EG13628" /db_xref="GeneID:945165" /translation="MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGF GCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAG RRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGA LVGYMLNANKIATAEITPVYEIK" mat_peptide 570179..570664 /gene="ybcL" /locus_tag="b0545" /gene_synonym="ECK0536; JW0533" /product="DLP12 prophage; secreted protein, UPF0098 family" /experiment="N-terminus verified by Edman degradation: PMID 11439028" gene 570677..571474 /gene="ybcM" /locus_tag="b0546" /gene_synonym="ECK0537; JW0534" /db_xref="ECOCYC:G6302" /db_xref="EcoGene:EG13629" /db_xref="GeneID:945163" CDS 570677..571474 /gene="ybcM" /locus_tag="b0546" /gene_synonym="ECK0537; JW0534" /function="Phage or Prophage Related" /note="putative ARAC-type regulatory protein" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted DNA-binding transcriptional regulator" /protein_id="NP_415078.1" /db_xref="GI:16128529" /db_xref="ASAP:ABE-0001871" /db_xref="UniProtKB/Swiss-Prot:P77634" /db_xref="ECOCYC:G6302" /db_xref="EcoGene:EG13629" /db_xref="GeneID:945163" /translation="MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINW ETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIR NKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSK QSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNA LSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE" gene 571591..571692 /gene="ylcH" /locus_tag="b4588" /gene_synonym="ECK4398" /db_xref="ECOCYC:G0-10584" /db_xref="EcoGene:EG14355" /db_xref="GeneID:5061504" CDS 571591..571692 /gene="ylcH" /locus_tag="b4588" /gene_synonym="ECK4398" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="hypothetical protein, DLP12 prophage" /protein_id="YP_001165308.1" /db_xref="GI:145698228" /db_xref="UniProtKB/Swiss-Prot:Q47268" /db_xref="ECOCYC:G0-10584" /db_xref="EcoGene:EG14355" /db_xref="GeneID:5061504" /translation="MRTYNPNSLLPSQMQKCTCNSLHLAFDLCGGEA" gene 571689..572144 /gene="ybcN" /locus_tag="b0547" /gene_synonym="ECK0538; JW0535" /db_xref="ECOCYC:G6303" /db_xref="EcoGene:EG13630" /db_xref="GeneID:945162" CDS 571689..572144 /gene="ybcN" /locus_tag="b0547" /gene_synonym="ECK0538; JW0535" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted protein" /protein_id="NP_415079.1" /db_xref="GI:16128530" /db_xref="ASAP:ABE-0001874" /db_xref="UniProtKB/Swiss-Prot:Q47269" /db_xref="ECOCYC:G6303" /db_xref="EcoGene:EG13630" /db_xref="GeneID:945162" /translation="MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRS LSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTI QSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA" gene 572144..572314 /gene="ninE" /locus_tag="b0548" /gene_synonym="ECK0539; JW0536" /db_xref="ECOCYC:G6304" /db_xref="EcoGene:EG14286" /db_xref="GeneID:945151" CDS 572144..572314 /gene="ninE" /locus_tag="b0548" /gene_synonym="ECK0539; JW0536" /function="Phage or Prophage Related" /note="similar to phage 82 and lambda proteins" /codon_start=1 /transl_table=11 /product="DLP12 prophage; conserved protein" /protein_id="NP_415080.1" /db_xref="GI:16128531" /db_xref="ASAP:ABE-0001876" /db_xref="UniProtKB/Swiss-Prot:Q47270" /db_xref="ECOCYC:G6304" /db_xref="EcoGene:EG14286" /db_xref="GeneID:945151" /translation="MATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDK KWLRLAARRSHG" gene 572307..572597 /gene="ybcO" /locus_tag="b0549" /gene_synonym="ECK0540; JW0537" /db_xref="ECOCYC:G6305" /db_xref="EcoGene:EG13631" /db_xref="GeneID:945147" CDS 572307..572597 /gene="ybcO" /locus_tag="b0549" /gene_synonym="ECK0540; JW0537" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted protein" /protein_id="NP_415081.1" /db_xref="GI:16128532" /db_xref="ASAP:ABE-0001878" /db_xref="UniProtKB/Swiss-Prot:P68661" /db_xref="ECOCYC:G6305" /db_xref="EcoGene:EG13631" /db_xref="GeneID:945147" /translation="MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTK PPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA" gene 572594..572956 /gene="rusA" /locus_tag="b0550" /gene_synonym="ECK0541; JW0538; rus; ybcP" /db_xref="ECOCYC:G6306" /db_xref="EcoGene:EG20283" /db_xref="GeneID:945174" CDS 572594..572956 /gene="rusA" /locus_tag="b0550" /gene_synonym="ECK0541; JW0538; rus; ybcP" /EC_number="3.1.22.-" /function="enzyme; Degradation of DNA; Phage or Prophage Related" /experiment="N-terminus verified by Edman degradation: PMID 7813450" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006308 - DNA catabolic process; GO:0006281 - DNA repair" /note="endodeoxyribonuclease RUS (Holliday junction resolvase)" /codon_start=1 /transl_table=11 /product="DLP12 prophage; endonuclease RUS" /protein_id="NP_415082.1" /db_xref="GI:16128533" /db_xref="ASAP:ABE-0001880" /db_xref="UniProtKB/Swiss-Prot:P0AG74" /db_xref="ECOCYC:G6306" /db_xref="EcoGene:EG20283" /db_xref="GeneID:945174" /translation="MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKN AMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKM PVTKGGRLELTITEMGNE" gene 572953..573093 /gene="ylcG" /locus_tag="b4509" /gene_synonym="ECK0542; JW5076" /db_xref="ECOCYC:G0-10435" /db_xref="EcoGene:EG14354" /db_xref="GeneID:1450240" CDS 572953..573093 /gene="ylcG" /locus_tag="b4509" /gene_synonym="ECK0542; JW5076" /function="Phage or Prophage Related" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="expressed protein, DLP12 prophage" /protein_id="YP_588439.1" /db_xref="GI:94541097" /db_xref="ASAP:ABE-0285030" /db_xref="UniProtKB/Swiss-Prot:Q47272" /db_xref="ECOCYC:G0-10435" /db_xref="EcoGene:EG14354" /db_xref="GeneID:1450240" /translation="MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGA GV" gene 573179..573562 /gene="quuD" /locus_tag="b0551" /gene_synonym="ECK0543; JW0539; ybcQ" /db_xref="ECOCYC:G6307" /db_xref="EcoGene:EG13633" /db_xref="GeneID:945177" CDS 573179..573562 /gene="quuD" /locus_tag="b0551" /gene_synonym="ECK0543; JW0539; ybcQ" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted antitermination protein" /protein_id="NP_415083.1" /db_xref="GI:16128534" /db_xref="ASAP:ABE-0001883" /db_xref="UniProtKB/Swiss-Prot:Q47274" /db_xref="ECOCYC:G6307" /db_xref="EcoGene:EG13633" /db_xref="GeneID:945177" /translation="MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQ CCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKA EGIIEGMLMALDIRLEMDIVVNNSN" gene complement(join(573752..573809,575009..576048)) /gene="nmpC" /locus_tag="b0553" /gene_synonym="ECK0544; JW5078; phmA" /pseudo /db_xref="ECOCYC:EG10659" /db_xref="EcoGene:EG10659" /db_xref="GeneID:946786" CDS complement(join(573752..573809,575009..576048)) /gene="nmpC" /locus_tag="b0553" /gene_synonym="ECK0544; JW5078; phmA" /note="DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001888" /db_xref="UniProtKB/Swiss-Prot:P21420" /db_xref="ECOCYC:EG10659" /db_xref="EcoGene:EG10659" /db_xref="GeneID:946786" repeat_region complement(573814..575008) /mobile_element="insertion sequence:IS5B" gene complement(573960..574976) /gene="insH" /locus_tag="b0552" /gene_synonym="ECK0261" /db_xref="ECOCYC:G6308" /db_xref="EcoGene:EG40008" /db_xref="GeneID:946163" CDS complement(573960..574976) /gene="insH" /locus_tag="b0552" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="NP_415084.1" /db_xref="GI:16128535" /db_xref="ASAP:ABE-0001886" /db_xref="ECOCYC:G6308" /db_xref="EcoGene:EG40008" /db_xref="GeneID:946163" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene 576621..576836 /gene="essD" /locus_tag="b0554" /gene_synonym="ECK0545; JW0543; ybcR" /db_xref="ECOCYC:G6309" /db_xref="EcoGene:EG13634" /db_xref="GeneID:947545" CDS 576621..576836 /gene="essD" /locus_tag="b0554" /gene_synonym="ECK0545; JW0543; ybcR" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted phage lysis protein" /protein_id="NP_415086.1" /db_xref="GI:16128537" /db_xref="ASAP:ABE-0001895" /db_xref="UniProtKB/Swiss-Prot:P0A9R2" /db_xref="ECOCYC:G6309" /db_xref="EcoGene:EG13634" /db_xref="GeneID:947545" /translation="MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGS LVFGLLTYLTNLYFKIKEDKRKAARGE" gene 576836..577333 /gene="arrD" /locus_tag="b0555" /gene_synonym="ECK0546; JW0544; ybcS" /db_xref="ECOCYC:G6310" /db_xref="EcoGene:EG13635" /db_xref="GeneID:947539" CDS 576836..577333 /gene="arrD" /locus_tag="b0555" /gene_synonym="ECK0546; JW0544; ybcS" /function="Phage or Prophage Related" /note="bacteriophage lambda lysozyme homolog" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted lysozyme" /protein_id="NP_415087.1" /db_xref="GI:16128538" /db_xref="ASAP:ABE-0001898" /db_xref="UniProtKB/Swiss-Prot:P78285" /db_xref="ECOCYC:G6310" /db_xref="EcoGene:EG13635" /db_xref="GeneID:947539" /translation="MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKD IVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGAL YSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVC LWGQQ" gene 577330..577791 /gene="rzpD" /locus_tag="b0556" /gene_synonym="ECK0547; JW5079; Rz; ybcT" /db_xref="ECOCYC:G6311" /db_xref="EcoGene:EG13636" /db_xref="GeneID:945929" CDS 577330..577791 /gene="rzpD" /locus_tag="b0556" /gene_synonym="ECK0547; JW5079; Rz; ybcT" /function="Phage or Prophage Related" /note="bacteriophage lambda endopeptidase homolog" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted murein endopeptidase" /protein_id="NP_415088.1" /db_xref="GI:16128539" /db_xref="ASAP:ABE-0001900" /db_xref="UniProtKB/Swiss-Prot:P75719" /db_xref="ECOCYC:G6311" /db_xref="EcoGene:EG13636" /db_xref="GeneID:945929" /translation="MSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNAREL KLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSV REATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR" gene 577550..577732 /gene="rzoD" /locus_tag="b4510" /gene_synonym="ECK0548; JW5080; Rz1" /db_xref="ECOCYC:G0-10436" /db_xref="EcoGene:EG14380" /db_xref="GeneID:1450242" CDS 577550..577732 /gene="rzoD" /locus_tag="b4510" /gene_synonym="ECK0548; JW5080; Rz1" /function="Phage or Prophage Related" /GO_component="GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted lipoprotein" /protein_id="YP_588440.1" /db_xref="GI:94541098" /db_xref="ASAP:ABE-0285031" /db_xref="UniProtKB/Swiss-Prot:P58041" /db_xref="ECOCYC:G0-10436" /db_xref="EcoGene:EG14380" /db_xref="GeneID:1450242" /translation="MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPP DWQTPLNGIISPSERG" gene complement(577823..578116) /gene="borD" /locus_tag="b0557" /gene_synonym="ECK0549; iss; JW0546; ybcU" /db_xref="ECOCYC:G6312" /db_xref="EcoGene:EG13637" /db_xref="GeneID:948980" CDS complement(577823..578116) /gene="borD" /locus_tag="b0557" /gene_synonym="ECK0549; iss; JW0546; ybcU" /function="Phage or Prophage Related" /note="bacteriophage lambda Bor protein homolog" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted lipoprotein" /protein_id="NP_415089.1" /db_xref="GI:16128540" /db_xref="ASAP:ABE-0001902" /db_xref="UniProtKB/Swiss-Prot:P77330" /db_xref="ECOCYC:G6312" /db_xref="EcoGene:EG13637" /db_xref="GeneID:948980" /translation="MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVS GIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK" gene complement(578407..578817) /gene="ybcV" /locus_tag="b0558" /gene_synonym="ECK0550; JW5081" /db_xref="ECOCYC:G6313" /db_xref="EcoGene:EG13638" /db_xref="GeneID:945178" CDS complement(578407..578817) /gene="ybcV" /locus_tag="b0558" /gene_synonym="ECK0550; JW5081" /function="Phage or Prophage Related" /note="putative an envelop protein" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted protein" /protein_id="NP_415090.2" /db_xref="GI:90111149" /db_xref="ASAP:ABE-0001907" /db_xref="UniProtKB/Swiss-Prot:P77598" /db_xref="ECOCYC:G6313" /db_xref="EcoGene:EG13638" /db_xref="GeneID:945178" /translation="MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNI HIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFR WITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR" gene 579103..579309 /gene="ybcW" /locus_tag="b0559" /gene_synonym="ECK0551; JW0548" /db_xref="ECOCYC:G6314" /db_xref="EcoGene:EG13639" /db_xref="GeneID:945175" CDS 579103..579309 /gene="ybcW" /locus_tag="b0559" /gene_synonym="ECK0551; JW0548" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; predicted protein" /protein_id="NP_415091.1" /db_xref="GI:16128542" /db_xref="ASAP:ABE-0001912" /db_xref="UniProtKB/Swiss-Prot:P64435" /db_xref="ECOCYC:G6314" /db_xref="EcoGene:EG13639" /db_xref="GeneID:945175" /translation="MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLE AFRAIEAALVKHDNNMKDYSLVVD" gene complement(579474..579668) /gene="ylcI" /locus_tag="b4589" /gene_synonym="ECK4399" /db_xref="ECOCYC:G0-10585" /db_xref="EcoGene:EG14444" /db_xref="GeneID:5061499" CDS complement(579474..579668) /gene="ylcI" /locus_tag="b4589" /gene_synonym="ECK4399" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001165309.1" /db_xref="GI:145698229" /db_xref="ECOCYC:G0-10585" /db_xref="EcoGene:EG14444" /db_xref="GeneID:5061499" /translation="MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEA CRRRLTSEKRAYTSIKSDEE" gene 580057..580602 /gene="nohD" /locus_tag="b0560" /gene_synonym="ECK0552; JW0549; nohB" /db_xref="ECOCYC:EG11635" /db_xref="EcoGene:EG11635" /db_xref="GeneID:945172" CDS 580057..580602 /gene="nohD" /locus_tag="b0560" /gene_synonym="ECK0552; JW0549; nohB" /function="Phage or Prophage Related" /note="bacteriophage DNA packaging protein" /codon_start=1 /transl_table=11 /product="DLP12 prophage; DNA packaging protein" /protein_id="NP_415092.1" /db_xref="GI:16128543" /db_xref="ASAP:ABE-0001915" /db_xref="UniProtKB/Swiss-Prot:P31062" /db_xref="ECOCYC:EG11635" /db_xref="EcoGene:EG11635" /db_xref="GeneID:945172" /translation="MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSA AVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNA RDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN KAAALDELIPGLLSEYIEQSG" gene 580577..580885 /gene="aaaD" /locus_tag="b4634" /gene_synonym="ECK4439; ylcF" /pseudo /db_xref="EcoGene:EG14346" /db_xref="GeneID:5625560" CDS 580577..580885 /gene="aaaD" /locus_tag="b4634" /gene_synonym="ECK4439; ylcF" /note="DLP12 prophage; predicted tail fiber assembly protein (pseudogene);Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14346" /db_xref="GeneID:5625560" gene 580883..581320 /gene="tfaD" /locus_tag="b0561" /gene_synonym="ECK0553; JW5815; ybcX" /pseudo /db_xref="ECOCYC:G6315" /db_xref="EcoGene:EG13640" /db_xref="GeneID:945171" CDS 580883..581320 /gene="tfaD" /locus_tag="b0561" /gene_synonym="ECK0553; JW5815; ybcX" /note="pseudogene, DLP12 prophage; predicted tail fiber assembly protein;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001917" /db_xref="UniProtKB/Swiss-Prot:P77699" /db_xref="ECOCYC:G6315" /db_xref="EcoGene:EG13640" /db_xref="GeneID:945171" gene complement(581375..582029) /gene="ybcY" /locus_tag="b0562" /gene_synonym="ECK0554; JW0551" /pseudo /db_xref="ECOCYC:G6316" /db_xref="EcoGene:EG13641" /db_xref="GeneID:945170" CDS complement(581375..582029) /gene="ybcY" /locus_tag="b0562" /gene_synonym="ECK0554; JW0551" /note="pseudogene, DLP12 prophage; methyltransferase homology;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001919" /db_xref="UniProtKB/Swiss-Prot:P77460" /db_xref="ECOCYC:G6316" /db_xref="EcoGene:EG13641" /db_xref="GeneID:945170" gene 582176..582358 /gene="tfaX" /locus_tag="b0563" /gene_synonym="ECK0555; JW0552; ylcE" /pseudo /db_xref="ECOCYC:G6317" /db_xref="EcoGene:EG14317" /db_xref="GeneID:945183" CDS 582176..582358 /gene="tfaX" /locus_tag="b0563" /gene_synonym="ECK0555; JW0552; ylcE" /note="pseudogene, DLP12 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001926" /db_xref="UniProtKB/Swiss-Prot:P77087" /db_xref="ECOCYC:G6317" /db_xref="EcoGene:EG14317" /db_xref="GeneID:945183" gene 582904..583653 /gene="appY" /locus_tag="b0564" /gene_synonym="ECK0556; JW0553" /db_xref="ECOCYC:EG10050" /db_xref="EcoGene:EG10050" /db_xref="GeneID:948797" CDS 582904..583653 /gene="appY" /locus_tag="b0564" /gene_synonym="ECK0556; JW0553" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions; Phage or Prophage Related" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0042594 - response to starvation; GO:0006350 - transcription" /note="regulatory protein affecting appA and other genes" /codon_start=1 /transl_table=11 /product="DNA-binding global transcriptional activator; DLP12 prophage" /protein_id="NP_415096.1" /db_xref="GI:16128547" /db_xref="ASAP:ABE-0001929" /db_xref="UniProtKB/Swiss-Prot:P05052" /db_xref="ECOCYC:EG10050" /db_xref="EcoGene:EG10050" /db_xref="GeneID:948797" /translation="MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVC PSKLRIVDIDKKTCLSFFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIAD SHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAE LIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYF ICAFKDYYGVTPSHYFEKIIGVTDGINKTID" gene complement(583903..584856) /gene="ompT" /locus_tag="b0565" /gene_synonym="ECK0557; JW0554" /db_xref="ECOCYC:EG10673" /db_xref="EcoGene:EG10673" /db_xref="GeneID:945185" CDS complement(583903..584856) /gene="ompT" /locus_tag="b0565" /gene_synonym="ECK0557; JW0554" /EC_number="3.4.23.49" /function="enzyme; Outer membrane constituents; Phage or Prophage Related" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="outer membrane protein 3b (a), protease VII" /codon_start=1 /transl_table=11 /product="DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)" /protein_id="NP_415097.1" /db_xref="GI:16128548" /db_xref="ASAP:ABE-0001931" /db_xref="UniProtKB/Swiss-Prot:P09169" /db_xref="ECOCYC:EG10673" /db_xref="EcoGene:EG10673" /db_xref="GeneID:945185" /translation="MRAKLLGIVLTTPIAISSFASTETLSFTPDNINADISLGTLSGK TKERVYLAEEGGRKVSQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMV DQDWMDSSNPGTWTDESRHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYS FTARGGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYEDFELGGTF KYSGWVESSDNDEHYDPGKRITYRSKVKDQNYYSVAVNAGYYVTPNAKVYVEGAWNRV TNKKGNTSLYDHNNNTSDYSKNGAGIENYNFITTAGLKYTF" mat_peptide complement(583906..584796) /gene="ompT" /locus_tag="b0565" /gene_synonym="ECK0557; JW0554" /product="DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)" /experiment="N-terminus verified by Edman degradation: PMID 3056908,3278297,9629924" gene 585280..585324 /gene="pauD" /locus_tag="b4635" /gene_synonym="ECK4463" /pseudo /db_xref="EcoGene:EG31172" /db_xref="GeneID:5625561" tRNA 585280..585324 /gene="pauD" /locus_tag="b4635" /gene_synonym="ECK4463" /product="tRNA-OTHER" /pseudo /db_xref="EcoGene:EG31172" /db_xref="GeneID:5625561" gene complement(585370..586131) /gene="envY" /locus_tag="b0566" /gene_synonym="ECK0558; JW0555" /db_xref="ECOCYC:EG10268" /db_xref="EcoGene:EG10268" /db_xref="GeneID:949114" CDS complement(585370..586131) /gene="envY" /locus_tag="b0566" /gene_synonym="ECK0558; JW0555" /function="structural component; Outer membrane constituents" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="envelope protein; thermoregulation of porin biosynthesis" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator of porin biosynthesis" /protein_id="NP_415098.1" /db_xref="GI:16128549" /db_xref="ASAP:ABE-0001935" /db_xref="UniProtKB/Swiss-Prot:P10805" /db_xref="ECOCYC:EG10268" /db_xref="EcoGene:EG10268" /db_xref="GeneID:949114" /translation="MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNV IELSTLNHVLITHINRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAA NHSKQQPSRPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQ HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQ LCGYSSTSYFISVFKAFYGLTPLNYLAKQRQKVMW" gene complement(586314..587204) /gene="ybcH" /locus_tag="b0567" /gene_synonym="ECK0559; JW0556" /db_xref="ECOCYC:EG12448" /db_xref="EcoGene:EG12448" /db_xref="GeneID:945186" CDS complement(586314..587204) /gene="ybcH" /locus_tag="b0567" /gene_synonym="ECK0559; JW0556" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415099.1" /db_xref="GI:16128550" /db_xref="ASAP:ABE-0001937" /db_xref="UniProtKB/Swiss-Prot:P37325" /db_xref="ECOCYC:EG12448" /db_xref="EcoGene:EG12448" /db_xref="GeneID:945186" /translation="MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLM SQLRLQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMH QKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLL TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKL TAEQRERYLQASADCQSPAPASGVVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCG KDTLYFSLRYLPVAHGILEY" gene complement(587205..590177) /gene="nfrA" /locus_tag="b0568" /gene_synonym="ECK0560; JW0557" /db_xref="ECOCYC:EG11740" /db_xref="EcoGene:EG11740" /db_xref="GeneID:944741" CDS complement(587205..590177) /gene="nfrA" /locus_tag="b0568" /gene_synonym="ECK0560; JW0557" /function="membrane; Phage-related functions and prophages" /function="6.1 cell structure; membrane" /function="7.4 location of gene products; outer membrane" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="bacteriophage N4 receptor, outer membrane protein" /codon_start=1 /transl_table=11 /product="bacteriophage N4 receptor, outer membrane subunit" /protein_id="NP_415100.1" /db_xref="GI:16128551" /db_xref="ASAP:ABE-0001939" /db_xref="UniProtKB/Swiss-Prot:P31600" /db_xref="ECOCYC:EG11740" /db_xref="EcoGene:EG11740" /db_xref="GeneID:944741" /translation="MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRH FVIYPRLDKALKAQKNNDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARL LLEDQLKRHPGDARLERSLAAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNA LRLAQLPVARAQLNDATFAASPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLS AAERRQWFDVLLAGQLDDRILALQSQGIFTDPQSYITYATALAYRGEKARLQHYLIEN KPLFTTDAQEKSWLYLLSKYSANPVQALANYTVQFADNRQYVVGATLPVLLKEGQYDA AQKLLATLPANEMLEERYAVSVATRNKAEALRLARLLYQQEPANLTRLDQLTWQLMQN EQSREAADLLLQRYPFQGDARVSQTLMARLASLLESHPYLATPAKVAILSKPLPLAEQ RQWQSQLPGIADNCPAIVRLLGDMSPSYDAAAWNRLAKCYRDTLPGVALYAWLQAEQR QPSAWQHRAVAYQAYQVEDYATALAAWQKISLHDMSNEDLLAAANTAQAAGNGAARDR WLQQAEKRGLGSNALYWWLHAQRYIPGQPELALNDLTRSINIAPSANAYVARATIYRQ RHNVPAAVSDLRAALELEPNNSNTQAALGYALWDSGDIAQSREMLEPAHKGLPDDPAL IRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLTPEQNQQRFNFRRLHEEVGRR WTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEAEYRIGRNMLLEGDLLSVY SRVFADTGENGVMMPVKNPMSGTGLRWKPLRDQIFFIAVEQQLPLNGQNGASDTMLRA SASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYIRQDIQAWTADYRVSWHQKVANGQT IEPYAHVQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVSLGVEYQHTFKAI NQRNGERNNAFLTIGVHW" gene complement(590164..592401) /gene="nfrB" /locus_tag="b0569" /gene_synonym="ECK0561; JW0558" /db_xref="ECOCYC:EG11739" /db_xref="EcoGene:EG11739" /db_xref="GeneID:945849" CDS complement(590164..592401) /gene="nfrB" /locus_tag="b0569" /gene_synonym="ECK0561; JW0558" /function="membrane; Phage-related functions and prophages" /function="6.1 cell structure; membrane" /function="7.3 location of gene products; inner membrane" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="bacteriophage N4 receptor, subunit, inner membrane protein" /codon_start=1 /transl_table=11 /product="bacteriophage N4 receptor, inner membrane subunit" /protein_id="NP_415101.1" /db_xref="GI:16128552" /db_xref="ASAP:ABE-0001942" /db_xref="UniProtKB/Swiss-Prot:P0AFA5" /db_xref="ECOCYC:EG11739" /db_xref="EcoGene:EG11739" /db_xref="GeneID:945849" /translation="MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRR IKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHI FVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANF AFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSEL HGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKE KGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGI VFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWH FLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFM ANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTA LRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVA LHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYA RRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLL LRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLES ENEGE" gene complement(592551..593993) /gene="cusS" /locus_tag="b0570" /gene_synonym="ECK0562; JW5082; silS; ybcZ" /db_xref="ECOCYC:G6318" /db_xref="EcoGene:EG13642" /db_xref="GeneID:945978" CDS complement(592551..593993) /gene="cusS" /locus_tag="b0570" /gene_synonym="ECK0562; JW5082; silS; ybcZ" /function="putative regulator; Not classified" /GO_component="GO:0019866 - organelle inner membrane" /GO_process="GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with CusR, senses copper ions" /protein_id="NP_415102.1" /db_xref="GI:16128553" /db_xref="ASAP:ABE-0001946" /db_xref="UniProtKB/Swiss-Prot:P77485" /db_xref="ECOCYC:G6318" /db_xref="EcoGene:EG13642" /db_xref="GeneID:945978" /translation="MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFA EQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSQGKTVYHSP GAPDIREFTRDAIPDKDAQGGEVYLLSGPTMMMPGHGHGHMEHSNWRMINLPVGPLVD GKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSR QIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTP ITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKK MLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTP TGETIVVRCQTVDHLVQVIVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLA IVKSIVVAHKGTVAVTSDARGTRFVITLPA" gene complement(593983..594666) /gene="cusR" /locus_tag="b0571" /gene_synonym="ECK0563; JW0560; silR; ylcA" /db_xref="ECOCYC:G6319" /db_xref="EcoGene:EG13851" /db_xref="GeneID:945003" CDS complement(593983..594666) /gene="cusR" /locus_tag="b0571" /gene_synonym="ECK0563; JW0560; silR; ylcA" /function="putative regulator; Not classified" /GO_process="GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator in two-component regulatory system with CusS" /protein_id="NP_415103.1" /db_xref="GI:16128554" /db_xref="ASAP:ABE-0001948" /db_xref="UniProtKB/Swiss-Prot:P0ACZ8" /db_xref="ECOCYC:G6319" /db_xref="EcoGene:EG13851" /db_xref="GeneID:945003" /translation="MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGD YDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKP FAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLE FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVG YMLEVPDGQ" gene 594823..596196 /gene="cusC" /locus_tag="b0572" /gene_synonym="ECK0564; ibeB; JW0561; silC; ylcB" /db_xref="ECOCYC:G6320" /db_xref="EcoGene:EG14233" /db_xref="GeneID:946288" CDS 594823..596196 /gene="cusC" /locus_tag="b0572" /gene_synonym="ECK0564; ibeB; JW0561; silC; ylcB" /function="putative transport; Drug/analog sensitivity" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="copper/silver efflux system, outer membrane component" /protein_id="NP_415104.1" /db_xref="GI:16128555" /db_xref="ASAP:ABE-0001958" /db_xref="UniProtKB/Swiss-Prot:P77211" /db_xref="ECOCYC:G6320" /db_xref="EcoGene:EG14233" /db_xref="GeneID:946288" /translation="MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVN AADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQL NGEGSGSWSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRA VHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQAR GVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQI LLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNF IPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQIS AQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISL YTALGGG" gene 596354..596686 /gene="cusF" /locus_tag="b0573" /gene_synonym="cusX; ECK0565; JW0562; silF; ylcC" /db_xref="ECOCYC:G6321" /db_xref="EcoGene:EG14234" /db_xref="GeneID:945188" CDS 596354..596686 /gene="cusF" /locus_tag="b0573" /gene_synonym="cusX; ECK0565; JW0562; silF; ylcC" /codon_start=1 /transl_table=11 /product="periplasmic copper- and silver-binding protein" /protein_id="NP_415105.1" /db_xref="GI:16128556" /db_xref="ASAP:ABE-0001967" /db_xref="UniProtKB/Swiss-Prot:P77214" /db_xref="ECOCYC:G6321" /db_xref="EcoGene:EG14234" /db_xref="GeneID:945188" /translation="MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVV KGIDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSL LQDIKVSQ" mat_peptide 596417..596683 /gene="cusF" /locus_tag="b0573" /gene_synonym="cusX; ECK0565; JW0562; silF; ylcC" /product="periplasmic copper- and silver-binding protein" /experiment="N-terminus verified by Edman degradation: PMID 12813074" gene 596702..597925 /gene="cusB" /locus_tag="b0574" /gene_synonym="ECK0566; JW0563; silB; ylcD" /db_xref="ECOCYC:G6322" /db_xref="EcoGene:EG14235" /db_xref="GeneID:945189" CDS 596702..597925 /gene="cusB" /locus_tag="b0574" /gene_synonym="ECK0566; JW0563; silB; ylcD" /function="putative transport; Drug/analog sensitivity" /GO_process="GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="copper/silver efflux system, membrane fusion protein" /protein_id="NP_415106.1" /db_xref="GI:16128557" /db_xref="ASAP:ABE-0001969" /db_xref="UniProtKB/Swiss-Prot:P77239" /db_xref="ECOCYC:G6322" /db_xref="EcoGene:EG14235" /db_xref="GeneID:945189" /translation="MKKIALIIGSMIAGGIISAAGFTWVAKAEPPAEKTSTAERKILF WYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRG PLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVE AQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVI TAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTL TIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASEPMLLIPSQALID TGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS GALERMRSESATHAH" gene 597937..601080 /gene="cusA" /locus_tag="b0575" /gene_synonym="ECK0567; JW0564; silA; ybdE" /db_xref="ECOCYC:EG12367" /db_xref="EcoGene:EG12367" /db_xref="GeneID:945191" CDS 597937..601080 /gene="cusA" /locus_tag="b0575" /gene_synonym="ECK0567; JW0564; silA; ybdE" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="copper/silver efflux system, membrane component" /protein_id="NP_415107.1" /db_xref="GI:16128558" /db_xref="ASAP:ABE-0001971" /db_xref="UniProtKB/Swiss-Prot:P38054" /db_xref="ECOCYC:EG12367" /db_xref="EcoGene:EG12367" /db_xref="GeneID:945191" /translation="MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSD VQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTD PYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQ DWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAG GSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIA ELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRA IDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGLNANIMS LGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPAL FISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGK IPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQIN EGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMV ETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIG IKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTV ADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITL ADVADIKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIAEKVQLKPGTSV AFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWL LWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQKLDEA LYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFI IPAAYKLMWLHRHRVRK" gene 601182..602558 /gene="pheP" /locus_tag="b0576" /gene_synonym="ECK0568; JW0565" /db_xref="ECOCYC:EG10708" /db_xref="EcoGene:EG10708" /db_xref="GeneID:945199" CDS 601182..602558 /gene="pheP" /locus_tag="b0576" /gene_synonym="ECK0568; JW0565" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009063 - cellular amino acid catabolic process; GO:0009094 - L-phenylalanine biosynthetic process" /note="phenylalanine-specific transport system" /codon_start=1 /transl_table=11 /product="phenylalanine transporter" /protein_id="NP_415108.1" /db_xref="GI:16128559" /db_xref="ASAP:ABE-0001976" /db_xref="UniProtKB/Swiss-Prot:P24207" /db_xref="ECOCYC:EG10708" /db_xref="EcoGene:EG10708" /db_xref="GeneID:945199" /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSN SSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR VSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFM AFKTLRRK" gene complement(602639..603886) /gene="ybdG" /locus_tag="b0577" /gene_synonym="ECK0569; JW0566" /db_xref="ECOCYC:G6323" /db_xref="EcoGene:EG12620" /db_xref="GeneID:946243" CDS complement(602639..603886) /gene="ybdG" /locus_tag="b0577" /gene_synonym="ECK0569; JW0566" /function="putative transport; Not classified" /GO_component="GO:0042597 - periplasmic space" /note="putative transport" /codon_start=1 /transl_table=11 /product="predicted mechanosensitive channel" /protein_id="NP_415109.1" /db_xref="GI:16128560" /db_xref="ASAP:ABE-0001978" /db_xref="UniProtKB/Swiss-Prot:P0AAT4" /db_xref="ECOCYC:G6323" /db_xref="EcoGene:EG12620" /db_xref="GeneID:946243" /translation="MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEY LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE FGLRLHQSPTGNDIRSLAGAFKQ" gene complement(603994..604647) /gene="nfsB" /locus_tag="b0578" /gene_synonym="dprA; ECK0570; JW0567; nfnB; nfsI; ntr" /db_xref="ECOCYC:EG50005" /db_xref="EcoGene:EG20151" /db_xref="GeneID:945778" CDS complement(603994..604647) /gene="nfsB" /locus_tag="b0578" /gene_synonym="dprA; ECK0570; JW0567; nfnB; nfsI; ntr" /EC_number="1.5.1.34" /function="enzyme; Drug/analog sensitivity" /experiment="N-terminus verified by Edman degradation: PMID 1472094,3060113,9298646" /GO_process="GO:0042493 - response to drug" /note="oxygen-insensitive NAD(P)H nitroreductase" /codon_start=1 /transl_table=11 /product="dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive" /protein_id="NP_415110.1" /db_xref="GI:16128561" /db_xref="ASAP:ABE-0001981" /db_xref="UniProtKB/Swiss-Prot:P38489" /db_xref="ECOCYC:EG50005" /db_xref="EcoGene:EG20151" /db_xref="GeneID:945778" /translation="MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQ PWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAMDDVWLKLVVDQE DADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV" gene complement(604741..605109) /gene="ybdF" /locus_tag="b0579" /gene_synonym="ECK0571; JW5083" /db_xref="ECOCYC:G6324" /db_xref="EcoGene:EG12619" /db_xref="GeneID:948302" CDS complement(604741..605109) /gene="ybdF" /locus_tag="b0579" /gene_synonym="ECK0571; JW5083" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415111.1" /db_xref="GI:16128562" /db_xref="ASAP:ABE-0001986" /db_xref="UniProtKB/Swiss-Prot:P0AAT2" /db_xref="ECOCYC:G6324" /db_xref="EcoGene:EG12619" /db_xref="GeneID:948302" /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND SWNLVVDGLAKRDQKRVRPG" gene complement(605174..605422) /gene="ybdJ" /locus_tag="b0580" /gene_synonym="ECK0572; JW0569" /db_xref="ECOCYC:G6325" /db_xref="EcoGene:EG13643" /db_xref="GeneID:947183" CDS complement(605174..605422) /gene="ybdJ" /locus_tag="b0580" /gene_synonym="ECK0572; JW0569" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein" /protein_id="NP_415112.1" /db_xref="GI:16128563" /db_xref="ASAP:ABE-0001988" /db_xref="UniProtKB/Swiss-Prot:P77506" /db_xref="ECOCYC:G6325" /db_xref="EcoGene:EG13643" /db_xref="GeneID:947183" /translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLALAQKLVTMFHL MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD" gene complement(605488..606606) /gene="ybdK" /locus_tag="b0581" /gene_synonym="ECK0573; JW0570" /db_xref="ECOCYC:G6326" /db_xref="EcoGene:EG13644" /db_xref="GeneID:947246" CDS complement(605488..606606) /gene="ybdK" /locus_tag="b0581" /gene_synonym="ECK0573; JW0570" /EC_number="6.3.2.2" /codon_start=1 /transl_table=11 /product="weak gamma-glutamyl:cysteine ligase" /protein_id="NP_415113.1" /db_xref="GI:16128564" /db_xref="ASAP:ABE-0001992" /db_xref="UniProtKB/Swiss-Prot:P77213" /db_xref="ECOCYC:G6326" /db_xref="EcoGene:EG13644" /db_xref="GeneID:947246" /translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNK ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPF QKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPH FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEAL HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD" gene 606957..607015 /gene="sokE" /locus_tag="b4700" /gene_synonym="ECK4512" /db_xref="EcoGene:EG31186" /db_xref="GeneID:8764969" ncRNA 606957..607015 /gene="sokE" /locus_tag="b4700" /gene_synonym="ECK4512" /ncRNA_class="antisense_RNA" /product="sRNA at remnant mokE/hokE locus" /db_xref="EcoGene:EG31186" /db_xref="GeneID:8764969" gene 607059..607211 /gene="hokE" /locus_tag="b4415" /gene_synonym="ECK0574; JW5084; ybdY" /db_xref="ECOCYC:G0-9582" /db_xref="EcoGene:EG14302" /db_xref="GeneID:2847715" CDS 607059..607211 /gene="hokE" /locus_tag="b4415" /gene_synonym="ECK0574; JW5084; ybdY" /function="component of addiction module (incomplete)" /note="small toxic membrane polypeptide; the corresponding mokE lacks a start codon, and the regulatory RNA sokE has not been identified" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="YP_025295.1" /db_xref="GI:49176035" /db_xref="ASAP:ABE-0047279" /db_xref="UniProtKB/Swiss-Prot:P77091" /db_xref="ECOCYC:G0-9582" /db_xref="EcoGene:EG14302" /db_xref="GeneID:2847715" /translation="MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL AYEPKK" repeat_region 607230..608574 /mobile_element="insertion sequence:IS186B" gene 607288..608400 /gene="insL" /locus_tag="b0582" /gene_synonym="ECK0016" /db_xref="ECOCYC:G6327" /db_xref="EcoGene:EG40012" /db_xref="GeneID:945200" CDS 607288..608400 /gene="insL" /locus_tag="b0582" /gene_synonym="ECK0016" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS186 transposase" /protein_id="NP_415114.1" /db_xref="GI:16128565" /db_xref="ASAP:ABE-0002007" /db_xref="ECOCYC:G6327" /db_xref="EcoGene:EG40012" /db_xref="GeneID:945200" /translation="MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLL RLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAV TGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFA QTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGL DCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQA ETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPEL AKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN" gene complement(608682..609311) /gene="entD" /locus_tag="b0583" /gene_synonym="ECK0575; JW5085" /db_xref="ECOCYC:EG10262" /db_xref="EcoGene:EG10262" /db_xref="GeneID:945194" CDS complement(608682..609311) /gene="entD" /locus_tag="b0583" /gene_synonym="ECK0575; JW5085" /EC_number="2.7.8.-" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009239 - enterobactin biosynthetic process" /note="enterochelin synthetase, component D" /codon_start=1 /transl_table=11 /product="phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex" /protein_id="NP_415115.1" /db_xref="GI:16128566" /db_xref="ASAP:ABE-0002009" /db_xref="UniProtKB/Swiss-Prot:P19925" /db_xref="ECOCYC:EG10262" /db_xref="EcoGene:EG10262" /db_xref="GeneID:945194" /translation="MVDMKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQH AGRKRKTEHLAGRIAAVYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGTTALAVV SRQPIGIDIEEIFSVQTARELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKA SEIQTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD" repeat_region 609340..609437 /note="RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(609477..611717) /gene="fepA" /locus_tag="b0584" /gene_synonym="cbr; cbt; ECK0576; fep; feuB; JW5086" /db_xref="ECOCYC:EG10293" /db_xref="EcoGene:EG10293" /db_xref="GeneID:945193" CDS complement(609477..611717) /gene="fepA" /locus_tag="b0584" /gene_synonym="cbr; cbt; ECK0576; fep; feuB; JW5086" /function="membrane; Transport of small molecules: Cations" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006826 - iron ion transport" /note="outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D" /codon_start=1 /transl_table=11 /product="iron-enterobactin outer membrane transporter" /protein_id="NP_415116.1" /db_xref="GI:16128567" /db_xref="ASAP:ABE-0002014" /db_xref="UniProtKB/Swiss-Prot:P05825" /db_xref="ECOCYC:EG10293" /db_xref="EcoGene:EG10293" /db_xref="GeneID:945193" /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN LQAPGVSTITADEIRKNPVARDVSKIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS RQGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHT RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN QQRMKDLSSNTQALTGTNTGGAIDGVSTTDRSPYSKAEIFSLFAENNMELTDSTIVTP GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS ATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM SVNTHF" mat_peptide complement(609480..611651) /gene="fepA" /locus_tag="b0584" /gene_synonym="cbr; cbt; ECK0576; fep; feuB; JW5086" /product="iron-enterobactin outer membrane transporter" /experiment="N-terminus verified by Edman degradation: PMID 10529396" gene 612038..613162 /gene="fes" /locus_tag="b0585" /gene_synonym="ECK0577; JW0576" /db_xref="ECOCYC:EG10299" /db_xref="EcoGene:EG10299" /db_xref="GeneID:945181" CDS 612038..613162 /gene="fes" /locus_tag="b0585" /gene_synonym="ECK0577; JW0576" /function="enzyme; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 2974033" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006826 - iron ion transport" /note="enterochelin esterase" /codon_start=1 /transl_table=11 /product="enterobactin/ferric enterobactin esterase" /protein_id="NP_415117.1" /db_xref="GI:16128568" /db_xref="ASAP:ABE-0002019" /db_xref="UniProtKB/Swiss-Prot:P13039" /db_xref="ECOCYC:EG10299" /db_xref="EcoGene:EG10299" /db_xref="GeneID:945181" /translation="MFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQPQSMQR IAGTNVWQWTTQLNANWRGSYCFIPTERDDIFSVPSPDRLELREGWRKLLPQAIADPL NLQSWKGGRGHAVSALEMPQAPLQPGWDCPQAPEIPAKEIIWKSERLKKSRRVWIFTT GDATAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHEL PCNADFWLAVQQELLPLVKAIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVL SQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMIMRANQALYAQLH PIKESIFWRQVDGGHDALCWRGGLMQGLIDLWQPLFHDRS" gene 613165..613383 /gene="ybdZ" /locus_tag="b4511" /gene_synonym="ECK0578; JW0577" /db_xref="ECOCYC:G0-10437" /db_xref="EcoGene:EG14353" /db_xref="GeneID:1450243" CDS 613165..613383 /gene="ybdZ" /locus_tag="b4511" /gene_synonym="ECK0578; JW0577" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="YP_588441.1" /db_xref="GI:94541099" /db_xref="ASAP:ABE-0285032" /db_xref="UniProtKB/Swiss-Prot:P18393" /db_xref="ECOCYC:G0-10437" /db_xref="EcoGene:EG14353" /db_xref="GeneID:1450243" /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQ SQASCQQWLEAHWRTLTPTNFTQLQEAQ" gene 613380..617261 /gene="entF" /locus_tag="b0586" /gene_synonym="ECK0579; JW0578" /db_xref="ECOCYC:EG10264" /db_xref="EcoGene:EG10264" /db_xref="GeneID:945184" CDS 613380..617261 /gene="entF" /locus_tag="b0586" /gene_synonym="ECK0579; JW0578" /EC_number="2.7.7.-" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /experiment="N-terminus verified by Edman degradation: PMID 1826089,2974033" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015937 - coenzyme A biosynthetic process; GO:0009239 - enterobactin biosynthetic process; GO:0006826 - iron ion transport; GO:0019184 - nonribosomal peptide biosynthetic process" /note="ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F)" /codon_start=1 /transl_table=11 /product="enterobactin synthase multienzyme complex component, ATP-dependent" /protein_id="NP_415118.1" /db_xref="GI:16128569" /db_xref="ASAP:ABE-0002021" /db_xref="UniProtKB/Swiss-Prot:P11454" /db_xref="ECOCYC:EG10264" /db_xref="EcoGene:EG10264" /db_xref="GeneID:945184" /translation="MSQHLPLVAAQPGIWMAEKLSELPSAWSVAHYVELTGEVDSPLL ARAVVAGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQ ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGR SASADILRLKLEFTDGEFRQLATQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFM RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD SGRAAGDEPLFGPVLNIKVFDYQLDIPDVQAQTHTLATGPVNDLELALFPDVHGDLSI EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQLNATQV EIPETTLSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLRERGVKPGDSV AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF SDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL LWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF AEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTGA PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGV AGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRS DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG LPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPLPELKAQAPGRAP KAGSETIIAAAFSSLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVM VASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYL DPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL DIYRQDCAHVDIISPGTFEKIGPIIRATLNR" gene 617477..618610 /gene="fepE" /locus_tag="b0587" /gene_synonym="ECK0580; JW0579" /db_xref="ECOCYC:EG10297" /db_xref="EcoGene:EG10297" /db_xref="GeneID:945180" CDS 617477..618610 /gene="fepE" /locus_tag="b0587" /gene_synonym="ECK0580; JW0579" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006826 - iron ion transport" /note="ferric enterobactin (enterochelin) transport" /codon_start=1 /transl_table=11 /product="regulator of length of O-antigen component of lipopolysaccharide chains" /protein_id="NP_415119.1" /db_xref="GI:16128570" /db_xref="ASAP:ABE-0002023" /db_xref="UniProtKB/Swiss-Prot:P26266" /db_xref="ECOCYC:EG10297" /db_xref="EcoGene:EG10297" /db_xref="GeneID:945180" /translation="MSSLNIKQGSDAHFPDYPLASPSNNEIDLLNLISVLWRAKKTVM AVVFAFACAGLLISFILPQKWTSAAVVTPPEPVQWQELEKSFTKLRVLDLDIKIDRTE AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS KKKDEPSLYTSWTLSFTAPTSEEAQTVLSGYIDYISTLVVKESLENVRNKLEIKTQFE KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKAHVNDVNFTPFKYQLSPSLPVKKD GPGKAIIVILSALIGGMVACGGVLLRYAMASRKQDAMMADHLV" gene complement(618607..619422) /gene="fepC" /locus_tag="b0588" /gene_synonym="ECK0581; JW0580" /db_xref="ECOCYC:EG10295" /db_xref="EcoGene:EG10295" /db_xref="GeneID:945201" CDS complement(618607..619422) /gene="fepC" /locus_tag="b0588" /gene_synonym="ECK0581; JW0580" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006826 - iron ion transport" /note="ATP-binding component of ferric enterobactin transport" /codon_start=1 /transl_table=11 /product="iron-enterobactin transporter subunit" /protein_id="NP_415120.1" /db_xref="GI:16128571" /db_xref="ASAP:ABE-0002025" /db_xref="UniProtKB/Swiss-Prot:P23878" /db_xref="ECOCYC:EG10295" /db_xref="EcoGene:EG10295" /db_xref="GeneID:945201" /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC GKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELV ARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLGRTAPSTANS" gene complement(619419..620411) /gene="fepG" /locus_tag="b0589" /gene_synonym="ECK0582; JW0581" /db_xref="ECOCYC:EG10298" /db_xref="EcoGene:EG10298" /db_xref="GeneID:945209" CDS complement(619419..620411) /gene="fepG" /locus_tag="b0589" /gene_synonym="ECK0582; JW0581" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006826 - iron ion transport" /note="ferric enterobactin transport protein; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="iron-enterobactin transporter subunit" /protein_id="NP_415121.1" /db_xref="GI:16128572" /db_xref="ASAP:ABE-0002027" /db_xref="UniProtKB/Swiss-Prot:P23877" /db_xref="ECOCYC:EG10298" /db_xref="EcoGene:EG10298" /db_xref="GeneID:945209" /translation="MIYVSRRLLITCLLLVSACVVAGIWGLRSGAVTLETSQVFAALM GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS GVLVAMVLFGQDLTAIALSAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLE MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK" gene complement(620408..621412) /gene="fepD" /locus_tag="b0590" /gene_synonym="ECK0583; JW0582" /db_xref="ECOCYC:EG10296" /db_xref="EcoGene:EG10296" /db_xref="GeneID:945214" CDS complement(620408..621412) /gene="fepD" /locus_tag="b0590" /gene_synonym="ECK0583; JW0582" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006826 - iron ion transport" /note="ferric enterobactin (enterochelin) transport; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="iron-enterobactin transporter subunit" /protein_id="NP_415122.1" /db_xref="GI:16128573" /db_xref="ASAP:ABE-0002031" /db_xref="UniProtKB/Swiss-Prot:P23876" /db_xref="ECOCYC:EG10296" /db_xref="EcoGene:EG10296" /db_xref="GeneID:945214" /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAF SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGA DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA" gene 621523..622773 /gene="entS" /locus_tag="b0591" /gene_synonym="ECK0584; JW0583; ybdA" /db_xref="ECOCYC:EG11104" /db_xref="EcoGene:EG11104" /db_xref="GeneID:946268" CDS 621523..622773 /gene="entS" /locus_tag="b0591" /gene_synonym="ECK0584; JW0583; ybdA" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport" /codon_start=1 /transl_table=11 /product="enterobactin exporter, iron-regulated" /protein_id="NP_415123.1" /db_xref="GI:16128574" /db_xref="ASAP:ABE-0002036" /db_xref="UniProtKB/Swiss-Prot:P24077" /db_xref="ECOCYC:EG11104" /db_xref="EcoGene:EG11104" /db_xref="GeneID:946268" /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI QMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGAL TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV LLLLVLVELRHFRQTPPQVTASDS" gene complement(622777..623733) /gene="fepB" /locus_tag="b0592" /gene_synonym="ECK0585; JW0584" /db_xref="ECOCYC:EG10294" /db_xref="EcoGene:EG10294" /db_xref="GeneID:947538" CDS complement(622777..623733) /gene="fepB" /locus_tag="b0592" /gene_synonym="ECK0585; JW0584" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006826 - iron ion transport" /note="ferric enterobactin (enterochelin) binding protein; periplasmic component; periplasmic-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="iron-enterobactin transporter subunit" /protein_id="NP_415124.1" /db_xref="GI:16128575" /db_xref="ASAP:ABE-0002038" /db_xref="UniProtKB/Swiss-Prot:P0AEL6" /db_xref="ECOCYC:EG10294" /db_xref="EcoGene:EG10294" /db_xref="GeneID:947538" /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM LEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIY ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLDRLKALF" mat_peptide complement(622780..623655) /gene="fepB" /locus_tag="b0592" /gene_synonym="ECK0585; JW0584" /product="iron-enterobactin transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 10986237" gene 624108..625283 /gene="entC" /locus_tag="b0593" /gene_synonym="ECK0586; fepF; JW0585" /db_xref="ECOCYC:EG10261" /db_xref="EcoGene:EG10261" /db_xref="GeneID:945511" CDS 624108..625283 /gene="entC" /locus_tag="b0593" /gene_synonym="ECK0586; fepF; JW0585" /EC_number="5.4.4.2" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /experiment="N-terminus verified by Edman degradation: PMID 2521622" /GO_process="GO:0009239 - enterobactin biosynthetic process" /note="isochorismate hydroxymutase 2, enterochelin biosynthesis" /codon_start=1 /transl_table=11 /product="isochorismate synthase 1" /protein_id="NP_415125.1" /db_xref="GI:16128576" /db_xref="ASAP:ABE-0002047" /db_xref="UniProtKB/Swiss-Prot:P0AEJ2" /db_xref="ECOCYC:EG10261" /db_xref="EcoGene:EG10261" /db_xref="GeneID:945511" /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV NGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK QASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH" gene 625293..626903 /gene="entE" /locus_tag="b0594" /gene_synonym="ECK0587; JW0586" /db_xref="ECOCYC:EG10263" /db_xref="EcoGene:EG10263" /db_xref="GeneID:947426" CDS 625293..626903 /gene="entE" /locus_tag="b0594" /gene_synonym="ECK0587; JW0586" /EC_number="2.7.7.58" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009239 - enterobactin biosynthetic process; GO:0019184 - nonribosomal peptide biosynthetic process" /note="2,3-dihydroxybenzoate-AMP ligase" /codon_start=1 /transl_table=11 /product="2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex" /protein_id="NP_415126.1" /db_xref="GI:16128577" /db_xref="ASAP:ABE-0002049" /db_xref="UniProtKB/Swiss-Prot:P10378" /db_xref="ECOCYC:EG10263" /db_xref="EcoGene:EG10263" /db_xref="GeneID:947426" /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID GERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGE HNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT ALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE CVDSLPLTAVGKVDKKQLRQWLASRASA" gene 626917..627774 /gene="entB" /locus_tag="b0595" /gene_synonym="ECK0588; entG; JW0587" /db_xref="ECOCYC:EG10260" /db_xref="EcoGene:EG10260" /db_xref="GeneID:946178" CDS 626917..627774 /gene="entB" /locus_tag="b0595" /gene_synonym="ECK0588; entG; JW0587" /EC_number="3.3.2.1" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009239 - enterobactin biosynthetic process; GO:0019184 - nonribosomal peptide biosynthetic process" /note="2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase" /codon_start=1 /transl_table=11 /product="isochorismatase" /protein_id="NP_415127.1" /db_xref="GI:16128578" /db_xref="ASAP:ABE-0002052" /db_xref="UniProtKB/Swiss-Prot:P0ADI4" /db_xref="ECOCYC:EG10260" /db_xref="EcoGene:EG10260" /db_xref="GeneID:946178" /translation="MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVS FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPIPASKAAL REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW WKLLSREVK" gene 627774..628520 /gene="entA" /locus_tag="b0596" /gene_synonym="ECK0589; JW0588" /db_xref="ECOCYC:EG10259" /db_xref="EcoGene:EG10259" /db_xref="GeneID:945284" CDS 627774..628520 /gene="entA" /locus_tag="b0596" /gene_synonym="ECK0589; JW0588" /EC_number="1.3.1.28" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /experiment="N-terminus verified by Edman degradation: PMID 2521622" /GO_process="GO:0009239 - enterobactin biosynthetic process" /note="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis" /codon_start=1 /transl_table=11 /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" /protein_id="NP_415128.1" /db_xref="GI:16128579" /db_xref="ASAP:ABE-0002054" /db_xref="UniProtKB/Swiss-Prot:P15047" /db_xref="ECOCYC:EG10259" /db_xref="EcoGene:EG10259" /db_xref="GeneID:945284" /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAV NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI ANTILFLASDLASHITLQDIVVDGGSTLGA" gene 628523..628936 /gene="entH" /locus_tag="b0597" /gene_synonym="ECK0590; JW0589; ybdB" /db_xref="ECOCYC:EG11105" /db_xref="EcoGene:EG11105" /db_xref="GeneID:945215" CDS 628523..628936 /gene="entH" /locus_tag="b0597" /gene_synonym="ECK0590; JW0589; ybdB" /codon_start=1 /transl_table=11 /product="thioesterase required for efficient enterobactin production" /protein_id="NP_415129.1" /db_xref="GI:16128580" /db_xref="ASAP:ABE-0002057" /db_xref="UniProtKB/Swiss-Prot:P0A8Y8" /db_xref="ECOCYC:EG11105" /db_xref="EcoGene:EG11105" /db_xref="GeneID:945215" /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG" gene 629117..631222 /gene="cstA" /locus_tag="b0598" /gene_synonym="ECK0591; JW0590; ybdC" /db_xref="ECOCYC:EG10167" /db_xref="EcoGene:EG10167" /db_xref="GeneID:945213" CDS 629117..631222 /gene="cstA" /locus_tag="b0598" /gene_synonym="ECK0591; JW0590; ybdC" /function="phenotype; Global regulatory functions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="carbon starvation protein" /protein_id="NP_415130.1" /db_xref="GI:16128581" /db_xref="ASAP:ABE-0002061" /db_xref="UniProtKB/Swiss-Prot:P15078" /db_xref="ECOCYC:EG10167" /db_xref="EcoGene:EG10167" /db_xref="GeneID:945213" /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI YLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRI GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP YEPMPENVEEIVAQAKGAH" repeat_region 631338..631371 /note="REP55 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 631405..631602 /gene="ybdD" /locus_tag="b4512" /gene_synonym="ECK0592; JW0591" /db_xref="ECOCYC:G0-10438" /db_xref="EcoGene:EG11107" /db_xref="GeneID:949021" CDS 631405..631602 /gene="ybdD" /locus_tag="b4512" /gene_synonym="ECK0592; JW0591" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="conserved protein, DUF466 family" /protein_id="YP_588442.1" /db_xref="GI:94541100" /db_xref="ASAP:ABE-0285033" /db_xref="UniProtKB/Swiss-Prot:P0AAS9" /db_xref="ECOCYC:G0-10438" /db_xref="EcoGene:EG11107" /db_xref="GeneID:949021" /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY EEFFRERQDARYGGKGGARCC" gene complement(631612..632700) /gene="ybdH" /locus_tag="b0599" /gene_synonym="ECK0593; JW0592" /db_xref="ECOCYC:EG12692" /db_xref="EcoGene:EG12692" /db_xref="GeneID:945212" CDS complement(631612..632700) /gene="ybdH" /locus_tag="b0599" /gene_synonym="ECK0593; JW0592" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase" /protein_id="NP_415132.1" /db_xref="GI:16128582" /db_xref="ASAP:ABE-0002065" /db_xref="UniProtKB/Swiss-Prot:P45579" /db_xref="ECOCYC:EG12692" /db_xref="EcoGene:EG12692" /db_xref="GeneID:945212" /translation="MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGKR AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALS DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP VESIHYLPVTLTPDTLRAAFKKVESFKA" gene 632809..633969 /gene="ybdL" /locus_tag="b0600" /gene_synonym="ECK0594; JW0593" /db_xref="ECOCYC:G6329" /db_xref="EcoGene:EG13531" /db_xref="GeneID:945211" CDS 632809..633969 /gene="ybdL" /locus_tag="b0600" /gene_synonym="ECK0594; JW0593" /EC_number="2.6.1.-" /function="putative enzyme; Not classified" /function="1 metabolism" /GO_process="GO:0008152 - metabolic process" /note="PLP-dependent methionine aminotransferase" /codon_start=1 /transl_table=11 /product="methionine aminotransferase, PLP-dependent" /protein_id="NP_415133.1" /db_xref="GI:16128583" /db_xref="ASAP:ABE-0002069" /db_xref="UniProtKB/Swiss-Prot:P77806" /db_xref="ECOCYC:G6329" /db_xref="EcoGene:EG13531" /db_xref="GeneID:945211" /translation="MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDG PRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATE ALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALL SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASV LAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLA LADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDD VEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL" gene complement(633970..634599) /gene="ybdM" /locus_tag="b0601" /gene_synonym="ECK0595; JW0594" /db_xref="ECOCYC:G6330" /db_xref="EcoGene:EG13532" /db_xref="GeneID:945206" CDS complement(633970..634599) /gene="ybdM" /locus_tag="b0601" /gene_synonym="ECK0595; JW0594" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415134.1" /db_xref="GI:16128584" /db_xref="ASAP:ABE-0002071" /db_xref="UniProtKB/Swiss-Prot:P77174" /db_xref="ECOCYC:G6330" /db_xref="EcoGene:EG13532" /db_xref="GeneID:945206" /translation="MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFRE EPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIV DGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIV RELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK" gene complement(634572..635792) /gene="ybdN" /locus_tag="b0602" /gene_synonym="ECK0596; JW0595" /db_xref="ECOCYC:G6331" /db_xref="EcoGene:EG13533" /db_xref="GeneID:945205" CDS complement(634572..635792) /gene="ybdN" /locus_tag="b0602" /gene_synonym="ECK0596; JW0595" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415135.1" /db_xref="GI:16128585" /db_xref="ASAP:ABE-0002073" /db_xref="UniProtKB/Swiss-Prot:P77216" /db_xref="ECOCYC:G6331" /db_xref="EcoGene:EG13533" /db_xref="GeneID:945205" /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS GVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHW YQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKSKNYQRYNERI KGKRQEWGILCNND" gene complement(635939..636841) /gene="ybdO" /locus_tag="b0603" /gene_synonym="ECK0597; JW0596" /db_xref="ECOCYC:G6332" /db_xref="EcoGene:EG13534" /db_xref="GeneID:945216" CDS complement(635939..636841) /gene="ybdO" /locus_tag="b0603" /gene_synonym="ECK0597; JW0596" /function="putative regulator; Not classified" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent; GO:0006350 - transcription" /note="putative transcriptional regulator LYSR-type" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415136.1" /db_xref="GI:16128586" /db_xref="ASAP:ABE-0002077" /db_xref="UniProtKB/Swiss-Prot:P77746" /db_xref="ECOCYC:G6332" /db_xref="EcoGene:EG13534" /db_xref="GeneID:945216" /translation="MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQS LQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFII YGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVIS RSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDER FMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLY ISYNKSSLNNLVFSRFIDRLNESF" gene complement(637050..637796) /gene="dsbG" /locus_tag="b0604" /gene_synonym="ECK0598; JW0597; ybdP" /db_xref="ECOCYC:G6333" /db_xref="EcoGene:EG13535" /db_xref="GeneID:945224" CDS complement(637050..637796) /gene="dsbG" /locus_tag="b0604" /gene_synonym="ECK0598; JW0597; ybdP" /EC_number="5.3.4.1" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006457 - protein folding" /note="thiol:disulfide interchange protein" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein, periplasmic" /protein_id="NP_415137.2" /db_xref="GI:90111151" /db_xref="ASAP:ABE-0002084" /db_xref="UniProtKB/Swiss-Prot:P77202" /db_xref="ECOCYC:G6333" /db_xref="EcoGene:EG13535" /db_xref="GeneID:945224" /translation="MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGM KGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRME QSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESP ATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTP AIYYMSKENTLQQAVGLPDQKTLNIIMGNK" mat_peptide complement(637053..637745) /gene="dsbG" /locus_tag="b0604" /gene_synonym="ECK0598; JW0597; ybdP" /product="thiol:disulfide interchange protein, periplasmic" /experiment="N-terminus verified by Edman degradation: PMID 9383195" gene 638168..638731 /gene="ahpC" /locus_tag="b0605" /gene_synonym="ECK0599; JW0598; tpx" /db_xref="ECOCYC:EG11384" /db_xref="EcoGene:EG11384" /db_xref="GeneID:945225" CDS 638168..638731 /gene="ahpC" /locus_tag="b0605" /gene_synonym="ECK0599; JW0598; tpx" /EC_number="1.11.1.15" /function="enzyme; Detoxification" /GO_process="GO:0006805 - xenobiotic metabolic process" /note="alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase, C22 subunit" /protein_id="NP_415138.1" /db_xref="GI:16128588" /db_xref="ASAP:ABE-0002090" /db_xref="UniProtKB/Swiss-Prot:P0AE08" /db_xref="ECOCYC:EG11384" /db_xref="EcoGene:EG11384" /db_xref="GeneID:945225" /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS HPGEVCPAKWKEGEATLAPSLDLVGKI" mat_peptide 638171..638728 /gene="ahpC" /locus_tag="b0605" /gene_synonym="ECK0599; JW0598; tpx" /product="alkyl hydroperoxide reductase, C22 subunit" /experiment="N-terminus verified by Edman degradation: PMID 1575737,7499381,8774726,9298646,9600841,10094700,10648109" gene 638976..640541 /gene="ahpF" /locus_tag="b0606" /gene_synonym="ECK0600; JW0599" /db_xref="ECOCYC:EG11385" /db_xref="EcoGene:EG11385" /db_xref="GeneID:947540" CDS 638976..640541 /gene="ahpF" /locus_tag="b0606" /gene_synonym="ECK0600; JW0599" /EC_number="1.11.1.15" /function="enzyme; Detoxification" /GO_process="GO:0006805 - xenobiotic metabolic process" /note="alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding" /protein_id="NP_415139.2" /db_xref="GI:90111152" /db_xref="ASAP:ABE-0002093" /db_xref="UniProtKB/Swiss-Prot:P35340" /db_xref="ECOCYC:EG11385" /db_xref="EcoGene:EG11385" /db_xref="GeneID:947540" /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA ELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS LSAFDYLIRTKTA" gene complement(640662..641090) /gene="uspG" /locus_tag="b0607" /gene_synonym="ECK0601; JW0600; UP12; ybdQ; yzzU" /db_xref="ECOCYC:G6334" /db_xref="EcoGene:EG12683" /db_xref="GeneID:945229" CDS complement(640662..641090) /gene="uspG" /locus_tag="b0607" /gene_synonym="ECK0601; JW0600; UP12; ybdQ; yzzU" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9298646,9600841" /codon_start=1 /transl_table=11 /product="universal stress protein UP12" /protein_id="NP_415140.1" /db_xref="GI:16128590" /db_xref="ASAP:ABE-0002095" /db_xref="UniProtKB/Swiss-Prot:P39177" /db_xref="ECOCYC:G6334" /db_xref="EcoGene:EG12683" /db_xref="GeneID:945229" /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSA SLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR" gene 641311..642549 /gene="ybdR" /locus_tag="b0608" /gene_synonym="ECK0602; JW0601" /db_xref="ECOCYC:G6335" /db_xref="EcoGene:EG13537" /db_xref="GeneID:949067" CDS 641311..642549 /gene="ybdR" /locus_tag="b0608" /gene_synonym="ECK0602; JW0601" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase, Zn-dependent and NAD(P)-binding" /protein_id="NP_415141.1" /db_xref="GI:16128591" /db_xref="ASAP:ABE-0002099" /db_xref="UniProtKB/Swiss-Prot:P77316" /db_xref="ECOCYC:G6335" /db_xref="EcoGene:EG13537" /db_xref="GeneID:949067" /translation="MKALTYHGPHHVQVENVPDPGVEQADDIILRITATAICGSDLHL YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRLQQYA ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD HHPYRLHFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTET VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLSFKMGQT HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQS AEAAQKAVSGLVNAMPGGTI" gene complement(642780..643190) /gene="rnk" /locus_tag="b0610" /gene_synonym="ECK0603; JW0602" /db_xref="ECOCYC:G6337" /db_xref="EcoGene:EG12637" /db_xref="GeneID:947546" CDS complement(642780..643190) /gene="rnk" /locus_tag="b0610" /gene_synonym="ECK0603; JW0602" /function="regulator; Central intermediary metabolism: Nucleotide interconversions" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="regulator of nucleoside diphosphate kinase" /protein_id="NP_415143.1" /db_xref="GI:16128593" /db_xref="ASAP:ABE-0002104" /db_xref="UniProtKB/Swiss-Prot:P0AFW4" /db_xref="ECOCYC:G6337" /db_xref="EcoGene:EG12637" /db_xref="GeneID:947546" /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL" gene complement(643420..644226) /gene="rna" /locus_tag="b0611" /gene_synonym="ECK0604; JW0603; rnsA" /db_xref="ECOCYC:EG10856" /db_xref="EcoGene:EG10856" /db_xref="GeneID:949065" CDS complement(643420..644226) /gene="rna" /locus_tag="b0611" /gene_synonym="ECK0604; JW0603; rnsA" /EC_number="3.1.27.6" /function="enzyme; Degradation of RNA" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006401 - RNA catabolic process" /note="RNase I, cleaves phosphodiester bond between any two nucleotides" /codon_start=1 /transl_table=11 /product="ribonuclease I" /protein_id="NP_415144.1" /db_xref="GI:16128594" /db_xref="ASAP:ABE-0002107" /db_xref="UniProtKB/Swiss-Prot:P21338" /db_xref="ECOCYC:EG10856" /db_xref="EcoGene:EG10856" /db_xref="GeneID:949065" /translation="MKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQ TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG CATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKL TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKAGY" mat_peptide complement(643423..644157) /gene="rna" /locus_tag="b0611" /gene_synonym="ECK0604; JW0603; rnsA" /product="ribonuclease I" /experiment="N-terminus verified by Edman degradation: PMID 2253883" gene complement(644340..645803) /gene="citT" /locus_tag="b0612" /gene_synonym="ECK0605; JW0604; ybdS" /db_xref="ECOCYC:G6338" /db_xref="EcoGene:EG13538" /db_xref="GeneID:949070" CDS complement(644340..645803) /gene="citT" /locus_tag="b0612" /gene_synonym="ECK0605; JW0604; ybdS" /function="putative membrane; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="citrate:succinate antiporter" /protein_id="NP_415145.1" /db_xref="GI:16128595" /db_xref="ASAP:ABE-0002110" /db_xref="UniProtKB/Swiss-Prot:P0AE74" /db_xref="ECOCYC:G6338" /db_xref="EcoGene:EG13538" /db_xref="GeneID:949070" /translation="MSLAKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAM IVGMILEPIPATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSST TVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL GLEFVSKIAGIQISWLQWFLCFLPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDE LKTMGALTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITR YNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAH YLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIY GCGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN" gene complement(645854..646732) /gene="citG" /locus_tag="b0613" /gene_synonym="ECK0606; JW0605; ybdT" /db_xref="ECOCYC:G6339" /db_xref="EcoGene:EG13539" /db_xref="GeneID:946395" CDS complement(645854..646732) /gene="citG" /locus_tag="b0613" /gene_synonym="ECK0606; JW0605; ybdT" /EC_number="2.7.8.25" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase" /protein_id="NP_415146.1" /db_xref="GI:16128596" /db_xref="ASAP:ABE-0002114" /db_xref="UniProtKB/Swiss-Prot:P77231" /db_xref="ECOCYC:G6339" /db_xref="EcoGene:EG13539" /db_xref="GeneID:946395" /translation="MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDR INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTN NSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL LMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSP GGSADLLILTWFLAQI" gene complement(646707..647258) /gene="citX" /locus_tag="b0614" /gene_synonym="ECK0607; JW0606; ybdU" /db_xref="ECOCYC:G6340" /db_xref="EcoGene:EG13540" /db_xref="GeneID:949084" CDS complement(646707..647258) /gene="citX" /locus_tag="b0614" /gene_synonym="ECK0607; JW0606; ybdU" /EC_number="2.7.7.61" /GO_process="GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="apo-citrate lyase phosphoribosyl-dephospho-CoA transferase" /protein_id="NP_415147.1" /db_xref="GI:16128597" /db_xref="ASAP:ABE-0002116" /db_xref="UniProtKB/Swiss-Prot:P0A6G5" /db_xref="ECOCYC:G6340" /db_xref="EcoGene:EG13540" /db_xref="GeneID:949084" /translation="MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFT VVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPAR DLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKT HQLTDLLNRMEALLNDVDACNVN" gene complement(647262..648794) /gene="citF" /locus_tag="b0615" /gene_synonym="ECK0608; JW5087; ybdV" /db_xref="ECOCYC:G6341" /db_xref="EcoGene:EG13541" /db_xref="GeneID:945230" CDS complement(647262..648794) /gene="citF" /locus_tag="b0615" /gene_synonym="ECK0608; JW5087; ybdV" /EC_number="4.1.3.6" /EC_number="2.8.3.10" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0005737 - cytoplasm" /note="citrate lyase alpha chain" /codon_start=1 /transl_table=11 /product="citrate lyase, citrate-ACP transferase (alpha) subunit" /protein_id="NP_415148.1" /db_xref="GI:16128598" /db_xref="ASAP:ABE-0002119" /db_xref="UniProtKB/Swiss-Prot:P75726" /db_xref="ECOCYC:G6341" /db_xref="EcoGene:EG13541" /db_xref="GeneID:945230" /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR KLCANLEEAIRRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI DVAFLGVPSCDEFGNANGYTGKACCGSLGYAIVDADNAKQVVMLTEELLPYPHNPASI EQDQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRG ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV KE" gene complement(648805..649713) /gene="citE" /locus_tag="b0616" /gene_synonym="ECK0609; JW0608; ybdW" /db_xref="ECOCYC:G6342" /db_xref="EcoGene:EG13542" /db_xref="GeneID:945406" CDS complement(648805..649713) /gene="citE" /locus_tag="b0616" /gene_synonym="ECK0609; JW0608; ybdW" /EC_number="4.1.3.6" /EC_number="4.1.3.34" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="citrate lyase, citryl-ACP lyase (beta) subunit" /protein_id="NP_415149.4" /db_xref="GI:90111153" /db_xref="ASAP:ABE-0002122" /db_xref="UniProtKB/Swiss-Prot:P0A9I1" /db_xref="ECOCYC:G6342" /db_xref="EcoGene:EG13542" /db_xref="GeneID:945406" /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG KMVDGPVIDRARLVLSRAELSGIREE" gene complement(649710..650006) /gene="citD" /locus_tag="b0617" /gene_synonym="ECK0610; JW0609; ybdX" /db_xref="ECOCYC:G6343" /db_xref="EcoGene:EG13543" /db_xref="GeneID:945415" CDS complement(649710..650006) /gene="citD" /locus_tag="b0617" /gene_synonym="ECK0610; JW0609; ybdX" /EC_number="4.1.3.6" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0042967 - acyl-carrier-protein biosynthetic process" /note="citrate lyase acyl carrier protein (gamma chain)" /codon_start=1 /transl_table=11 /product="citrate lyase, acyl carrier (gamma) subunit" /protein_id="NP_415150.1" /db_xref="GI:16128600" /db_xref="ASAP:ABE-0002124" /db_xref="UniProtKB/Swiss-Prot:P69330" /db_xref="ECOCYC:G6343" /db_xref="EcoGene:EG13543" /db_xref="GeneID:945415" /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA IRTTILDVLARYNVRGVQLNVDDKGALDCILRARLEALLARASGIPALPWEDCQ" gene complement(650021..651079) /gene="citC" /locus_tag="b0618" /gene_synonym="ECK0611; JW0610; ybeO" /db_xref="ECOCYC:G6344" /db_xref="EcoGene:EG13645" /db_xref="GeneID:945231" CDS complement(650021..651079) /gene="citC" /locus_tag="b0618" /gene_synonym="ECK0611; JW0610; ybeO" /EC_number="6.2.1.22" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006464 - protein modification process" /note="citrate lyase synthetase (citrate (pro-3S)-lyase ligase" /codon_start=1 /transl_table=11 /product="[citrate [pro-3S]-lyase] ligase" /protein_id="NP_415151.4" /db_xref="GI:90111154" /db_xref="ASAP:ABE-0002126" /db_xref="UniProtKB/Swiss-Prot:P77390" /db_xref="ECOCYC:G6344" /db_xref="EcoGene:EG13645" /db_xref="GeneID:945231" /translation="MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTR DEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYE ALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNG HRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISR ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMR YWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQ NLLEHSRQDAAARQKTPA" gene 651458..653116 /gene="dpiB" /locus_tag="b0619" /gene_synonym="citA; ECK0612; JW0611; mpdB; ybeP" /db_xref="ECOCYC:G6345" /db_xref="EcoGene:EG13646" /db_xref="GeneID:945233" CDS 651458..653116 /gene="dpiB" /locus_tag="b0619" /gene_synonym="citA; ECK0612; JW0611; mpdB; ybeP" /function="putative regulator; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006464 - protein modification process" /note="putative sensor-type protein" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with citB" /protein_id="NP_415152.1" /db_xref="GI:16128602" /db_xref="ASAP:ABE-0002129" /db_xref="UniProtKB/Swiss-Prot:P77510" /db_xref="ECOCYC:G6345" /db_xref="EcoGene:EG13646" /db_xref="GeneID:945233" /translation="MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTAS FEDYLTLHVRDMAMNQAKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGD RHSIRLYHPNPEKIGYPMQFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVI GVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIA RVVRQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIVEVVRPA DFFTEQIDEKRQDVVANFNGLSVIANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQ IKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGESQAQQQLIDSLREAFAD RQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAIVGNLLDNAFEASLR SDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPGEHGIGLY LIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPIDR" gene 653085..653765 /gene="dpiA" /locus_tag="b0620" /gene_synonym="citB; criR; ECK0613; JW0612; mpdA" /db_xref="ECOCYC:G6346" /db_xref="EcoGene:EG13544" /db_xref="GeneID:947008" CDS 653085..653765 /gene="dpiA" /locus_tag="b0620" /gene_synonym="citB; criR; ECK0613; JW0612; mpdA" /function="putative regulator; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="sequence similarity to Shigella regulator" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator in two-component regulatory system with citA" /protein_id="NP_415153.1" /db_xref="GI:16128603" /db_xref="ASAP:ABE-0002131" /db_xref="UniProtKB/Swiss-Prot:P0AEF4" /db_xref="ECOCYC:G6346" /db_xref="EcoGene:EG13544" /db_xref="GeneID:947008" /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID PLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGR PQRIYHSG" repeat_region 653775..653797 /note="REP56 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(653806..655191) /gene="dcuC" /locus_tag="b0621" /gene_synonym="ECK0614; JW0613; JW0616" /db_xref="ECOCYC:G6347" /db_xref="EcoGene:EG13545" /db_xref="GeneID:945000" CDS complement(653806..655191) /gene="dcuC" /locus_tag="b0621" /gene_synonym="ECK0614; JW0613; JW0616" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="transport of dicarboxylates" /codon_start=1 /transl_table=11 /product="anaerobic C4-dicarboxylate transport" /protein_id="NP_415154.1" /db_xref="GI:16128604" /db_xref="ASAP:ABE-0002133" /db_xref="UniProtKB/Swiss-Prot:P0ABP3" /db_xref="ECOCYC:G6347" /db_xref="EcoGene:EG13545" /db_xref="GeneID:945000" /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM VPGTAAAVTGK" gene 655780..656340 /gene="pagP" /locus_tag="b0622" /gene_synonym="crcA; ECK0615; JW0617; ybeG" /db_xref="ECOCYC:EG12180" /db_xref="EcoGene:EG12180" /db_xref="GeneID:946360" CDS 655780..656340 /gene="pagP" /locus_tag="b0622" /gene_synonym="crcA; ECK0615; JW0617; ybeG" /EC_number="2.3.1.-" /function="enzyme; Surface polysaccharides & antigens" /codon_start=1 /transl_table=11 /product="phospholipid:lipid A palmitoyltransferase" /protein_id="NP_415155.1" /db_xref="GI:16128605" /db_xref="ASAP:ABE-0002139" /db_xref="UniProtKB/Swiss-Prot:P37001" /db_xref="ECOCYC:EG12180" /db_xref="EcoGene:EG12180" /db_xref="GeneID:946360" /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQ PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP VTFQMTYIPGTYNNGNVYFAWMRFQF" mat_peptide 655855..656337 /gene="pagP" /locus_tag="b0622" /gene_synonym="crcA; ECK0615; JW0617; ybeG" /product="phospholipid:lipid A palmitoyltransferase" /experiment="N-terminus verified by Edman degradation: PMID 11013210" gene 656515..656724 /gene="cspE" /locus_tag="b0623" /gene_synonym="ECK0616; gicA; JW0618; msmC" /db_xref="ECOCYC:EG12179" /db_xref="EcoGene:EG12179" /db_xref="GeneID:947024" CDS 656515..656724 /gene="cspE" /locus_tag="b0623" /gene_synonym="ECK0616; gicA; JW0618; msmC" /function="phenotype; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0009266 - response to temperature stimulus; GO:0006350 - transcription" /note="cold shock protein" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor" /protein_id="NP_415156.1" /db_xref="GI:16128606" /db_xref="ASAP:ABE-0002142" /db_xref="UniProtKB/Swiss-Prot:P0A972" /db_xref="ECOCYC:EG12179" /db_xref="EcoGene:EG12179" /db_xref="GeneID:947024" /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL AEGQRVEFEITNGAKGPSAANVIAL" mat_peptide 656518..656721 /gene="cspE" /locus_tag="b0623" /gene_synonym="ECK0616; gicA; JW0618; msmC" /product="DNA-binding transcriptional repressor" /experiment="N-terminus verified by Edman degradation: PMID 9735283" gene complement(656778..657161) /gene="crcB" /locus_tag="b0624" /gene_synonym="ECK0617; JW0619; ybeI" /db_xref="ECOCYC:EG12209" /db_xref="EcoGene:EG12209" /db_xref="GeneID:945798" CDS complement(656778..657161) /gene="crcB" /locus_tag="b0624" /gene_synonym="ECK0617; JW0619; ybeI" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="inner membrane protein associated with chromosome condensation" /protein_id="NP_415157.1" /db_xref="GI:16128607" /db_xref="ASAP:ABE-0002144" /db_xref="UniProtKB/Swiss-Prot:P37002" /db_xref="ECOCYC:EG12209" /db_xref="EcoGene:EG12209" /db_xref="GeneID:945798" /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIG AFIIGIGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN VFVNLLGSFAMTALAFWLFSASTAH" gene 657254..658041 /gene="ybeM" /locus_tag="b4581" /old_locus_tag="b0625" /old_locus_tag="b0626" /gene_synonym="ECK0618; JW0620; ybeH" /pseudo /db_xref="EcoGene:EG13162" /db_xref="GeneID:4056041" CDS join(657254..657448,657448..658041) /gene="ybeM" /locus_tag="b4581" /old_locus_tag="b0625" /old_locus_tag="b0626" /gene_synonym="ECK0618; JW0620; ybeH" /note="pseudogene, C-N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002148" /db_xref="ASAP:ABE-0002150" /db_xref="ASAP:ABE-0285113" /db_xref="UniProtKB/Swiss-Prot:P39874" /db_xref="EcoGene:EG13162" /db_xref="GeneID:4056041" gene 658170..658373 /gene="tatE" /locus_tag="b0627" /gene_synonym="ECK0620; JW0622; ybeC" /db_xref="ECOCYC:EG11305" /db_xref="EcoGene:EG11305" /db_xref="GeneID:945228" CDS 658170..658373 /gene="tatE" /locus_tag="b0627" /gene_synonym="ECK0620; JW0622; ybeC" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="TatABCE protein translocation system subunit" /protein_id="NP_415160.1" /db_xref="GI:16128610" /db_xref="ASAP:ABE-0002153" /db_xref="UniProtKB/Swiss-Prot:P0A843" /db_xref="ECOCYC:EG11305" /db_xref="EcoGene:EG11305" /db_xref="GeneID:945228" /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN DDDAAAKKGADVDLQAEKLSHKE" gene complement(658474..659439) /gene="lipA" /locus_tag="b0628" /gene_synonym="ECK0621; JW0623; lip" /db_xref="ECOCYC:EG11306" /db_xref="EcoGene:EG11306" /db_xref="GeneID:945227" CDS complement(658474..659439) /gene="lipA" /locus_tag="b0628" /gene_synonym="ECK0621; JW0623; lip" /EC_number="2.8.1.-" /function="putative enzyme; Biosynthesis of cofactors, carriers: Lipoate" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009107 - lipoate biosynthetic process" /note="lipoate synthesis, sulfur insertion?" /codon_start=1 /transl_table=11 /product="lipoate synthase" /protein_id="NP_415161.1" /db_xref="GI:16128611" /db_xref="ASAP:ABE-0002155" /db_xref="UniProtKB/Swiss-Prot:P60716" /db_xref="ECOCYC:EG11306" /db_xref="EcoGene:EG11306" /db_xref="GeneID:945227" /translation="MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIK LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK" mat_peptide complement(658477..659436) /gene="lipA" /locus_tag="b0628" /gene_synonym="ECK0621; JW0623; lip" /product="lipoate synthase" /experiment="N-terminus verified by Edman degradation: PMID 10403368,11106496" gene complement(659648..660601) /gene="ybeF" /locus_tag="b0629" /gene_synonym="ECK0622; JW0624" /db_xref="ECOCYC:EG11594" /db_xref="EcoGene:EG11594" /db_xref="GeneID:945219" CDS complement(659648..660601) /gene="ybeF" /locus_tag="b0629" /gene_synonym="ECK0622; JW0624" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator LYSR-type" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415162.4" /db_xref="GI:90111155" /db_xref="ASAP:ABE-0002158" /db_xref="UniProtKB/Swiss-Prot:P30979" /db_xref="ECOCYC:EG11594" /db_xref="EcoGene:EG11594" /db_xref="GeneID:945219" /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHK GIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF" gene complement(660860..661501) /gene="lipB" /locus_tag="b0630" /gene_synonym="cde; ECK0623; JW5089" /db_xref="ECOCYC:EG11591" /db_xref="EcoGene:EG11591" /db_xref="GeneID:945217" CDS complement(660860..661501) /gene="lipB" /locus_tag="b0630" /gene_synonym="cde; ECK0623; JW5089" /EC_number="2.3.1.-" /function="enzyme; Biosynthesis of cofactors, carriers: Lipoate" /GO_process="GO:0009107 - lipoate biosynthetic process" /note="protein of lipoate biosynthesis" /codon_start=1 /transl_table=11 /product="lipoyl-protein ligase" /protein_id="NP_415163.2" /db_xref="GI:90111156" /db_xref="ASAP:ABE-0002160" /db_xref="UniProtKB/Swiss-Prot:P60720" /db_xref="ECOCYC:EG11591" /db_xref="EcoGene:EG11591" /db_xref="GeneID:945217" /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA" gene complement(661602..661865) /gene="ybeD" /locus_tag="b0631" /gene_synonym="ECK0624; JW0626" /db_xref="ECOCYC:EG11592" /db_xref="EcoGene:EG11592" /db_xref="GeneID:945220" CDS complement(661602..661865) /gene="ybeD" /locus_tag="b0631" /gene_synonym="ECK0624; JW0626" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0250 family" /protein_id="NP_415164.1" /db_xref="GI:16128614" /db_xref="ASAP:ABE-0002162" /db_xref="UniProtKB/Swiss-Prot:P0A8J4" /db_xref="ECOCYC:EG11592" /db_xref="EcoGene:EG11592" /db_xref="GeneID:945220" /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT PTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL" gene complement(661975..663186) /gene="dacA" /locus_tag="b0632" /gene_synonym="ECK0625; JW0627; pfv" /db_xref="ECOCYC:EG10201" /db_xref="EcoGene:EG10201" /db_xref="GeneID:945222" CDS complement(661975..663186) /gene="dacA" /locus_tag="b0632" /gene_synonym="ECK0625; JW0627; pfv" /EC_number="3.4.16.4" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0019866 - organelle inner membrane" /GO_process="GO:0042493 - response to drug" /note="D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)" /protein_id="NP_415165.1" /db_xref="GI:16128615" /db_xref="ASAP:ABE-0002168" /db_xref="UniProtKB/Swiss-Prot:P0AEB2" /db_xref="ECOCYC:EG10201" /db_xref="EcoGene:EG10201" /db_xref="GeneID:945222" /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRM KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID YIKLMFHHWFG" mat_peptide complement(661978..663099) /gene="dacA" /locus_tag="b0632" /gene_synonym="ECK0625; JW0627; pfv" /product="D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)" /experiment="N-terminus verified by Edman degradation: PMID 7042389" gene complement(663325..664413) /gene="rlpA" /locus_tag="b0633" /gene_synonym="ECK0626; JW0628" /db_xref="ECOCYC:EG10854" /db_xref="EcoGene:EG10854" /db_xref="GeneID:945241" CDS complement(663325..664413) /gene="rlpA" /locus_tag="b0633" /gene_synonym="ECK0626; JW0628" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="a minor lipoprotein" /codon_start=1 /transl_table=11 /product="septal ring protein, suppressor of prc, minor lipoprotein" /protein_id="NP_415166.1" /db_xref="GI:16128616" /db_xref="ASAP:ABE-0002171" /db_xref="UniProtKB/Swiss-Prot:P10100" /db_xref="ECOCYC:EG10854" /db_xref="EcoGene:EG10854" /db_xref="GeneID:945241" /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA MVTPQAVSQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP FASKAEASTLQQRLQTEAQLQSFITTAQ" gene complement(664424..665536) /gene="mrdB" /locus_tag="b0634" /gene_synonym="ECK0627; JW0629; rodA" /db_xref="ECOCYC:EG10607" /db_xref="EcoGene:EG10607" /db_xref="GeneID:945238" CDS complement(664424..665536) /gene="mrdB" /locus_tag="b0634" /gene_synonym="ECK0627; JW0629; rodA" /function="phenotype; Cell division" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="rod shape-determining membrane protein; sensitivity to radiation and drugs" /codon_start=1 /transl_table=11 /product="cell wall shape-determining protein" /protein_id="NP_415167.1" /db_xref="GI:16128617" /db_xref="ASAP:ABE-0002173" /db_xref="UniProtKB/Swiss-Prot:P0ABG7" /db_xref="ECOCYC:EG10607" /db_xref="EcoGene:EG10607" /db_xref="GeneID:945238" /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV" gene complement(665539..667440) /gene="mrdA" /locus_tag="b0635" /gene_synonym="ECK0628; JW0630; pbpA" /db_xref="ECOCYC:EG10606" /db_xref="EcoGene:EG10606" /db_xref="GeneID:945240" CDS complement(665539..667440) /gene="mrdA" /locus_tag="b0635" /gene_synonym="ECK0628; JW0630; pbpA" /function="enzyme; Cell division" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process; GO:0042493 - response to drug" /note="cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2" /codon_start=1 /transl_table=11 /product="transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2)" /protein_id="NP_415168.1" /db_xref="GI:16128618" /db_xref="ASAP:ABE-0002178" /db_xref="UniProtKB/Swiss-Prot:P0AD65" /db_xref="ECOCYC:EG10606" /db_xref="EcoGene:EG10606" /db_xref="GeneID:945240" /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH SGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN PAVAAAEDH" gene complement(667471..667938) /gene="rlmH" /locus_tag="b0636" /gene_synonym="ECK0629; JW0631; ybeA" /db_xref="ECOCYC:EG11254" /db_xref="EcoGene:EG11254" /db_xref="GeneID:945239" CDS complement(667471..667938) /gene="rlmH" /locus_tag="b0636" /gene_synonym="ECK0629; JW0631; ybeA" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA m(3)Psi1915 pseudouridine methyltransferase; SAM-dependent" /protein_id="NP_415169.1" /db_xref="GI:16128619" /db_xref="ASAP:ABE-0002180" /db_xref="UniProtKB/Swiss-Prot:P0A8I8" /db_xref="ECOCYC:EG11254" /db_xref="EcoGene:EG11254" /db_xref="GeneID:945239" /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE" gene complement(667942..668259) /gene="ybeB" /locus_tag="b0637" /gene_synonym="ECK0630; JW5090; slm3" /db_xref="ECOCYC:EG11255" /db_xref="EcoGene:EG11255" /db_xref="GeneID:945237" CDS complement(667942..668259) /gene="ybeB" /locus_tag="b0637" /gene_synonym="ECK0630; JW5090; slm3" /codon_start=1 /transl_table=11 /product="ribosome-associated protein" /protein_id="NP_415170.4" /db_xref="GI:90111157" /db_xref="ASAP:ABE-0002183" /db_xref="UniProtKB/Swiss-Prot:P0AAT6" /db_xref="ECOCYC:EG11255" /db_xref="EcoGene:EG11255" /db_xref="GeneID:945237" /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK LWS" gene complement(668519..669130) /gene="cobC" /locus_tag="b0638" /gene_synonym="ECK0631; JW0633; phpB" /db_xref="ECOCYC:G6349" /db_xref="EcoGene:EG13240" /db_xref="GeneID:945246" CDS complement(668519..669130) /gene="cobC" /locus_tag="b0638" /gene_synonym="ECK0631; JW0633; phpB" /function="putative regulator; Biosynthesis of cofactors, carriers: Cobalamin" /note="homolog of Salmonella cobC, a phosphohistidine protein" /codon_start=1 /transl_table=11 /product="predicted alpha-ribazole-5'-P phosphatase" /protein_id="NP_415171.1" /db_xref="GI:16128621" /db_xref="ASAP:ABE-0002185" /db_xref="UniProtKB/Swiss-Prot:P52086" /db_xref="ECOCYC:G6349" /db_xref="EcoGene:EG13240" /db_xref="GeneID:945246" /translation="MRLWLIRHGETQANIDGLYSGHAPTPLTARGIEQAQNLHTLLHG VSFDLVLCSELERAQHTARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAEN YSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARL IGMPAEAMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVENA" gene complement(669154..669795) /gene="nadD" /locus_tag="b0639" /gene_synonym="ECK0632; fusB; JW0634; ybeN" /db_xref="ECOCYC:G6350" /db_xref="EcoGene:EG13241" /db_xref="GeneID:945248" CDS complement(669154..669795) /gene="nadD" /locus_tag="b0639" /gene_synonym="ECK0632; fusB; JW0634; ybeN" /EC_number="2.7.7.18" /GO_process="GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent" /protein_id="NP_415172.1" /db_xref="GI:16128622" /db_xref="ASAP:ABE-0002187" /db_xref="UniProtKB/Swiss-Prot:P0A752" /db_xref="ECOCYC:G6350" /db_xref="EcoGene:EG13241" /db_xref="GeneID:945248" /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPED LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR" gene complement(669797..670828) /gene="holA" /locus_tag="b0640" /gene_synonym="ECK0633; JW0635" /db_xref="ECOCYC:EG11412" /db_xref="EcoGene:EG11412" /db_xref="GeneID:947573" CDS complement(669797..670828) /gene="holA" /locus_tag="b0640" /gene_synonym="ECK0633; JW0635" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 1400251,8505303" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III, delta subunit" /protein_id="NP_415173.1" /db_xref="GI:16128623" /db_xref="ASAP:ABE-0002192" /db_xref="UniProtKB/Swiss-Prot:P28630" /db_xref="ECOCYC:EG11412" /db_xref="EcoGene:EG11412" /db_xref="GeneID:947573" /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV DALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH RVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK PLADVFIDG" gene complement(670828..671409) /gene="lptE" /locus_tag="b0641" /gene_synonym="ECK0634; JW0636; rlpB" /db_xref="ECOCYC:EG10855" /db_xref="EcoGene:EG10855" /db_xref="GeneID:946257" CDS complement(670828..671409) /gene="lptE" /locus_tag="b0641" /gene_synonym="ECK0634; JW0636; rlpB" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /GO_component="GO:0019866 - organelle inner membrane" /GO_process="GO:0042158 - lipoprotein biosynthetic process" /note="a minor lipoprotein" /codon_start=1 /transl_table=11 /product="LPS assembly OM complex LptDE, lipoprotein component" /protein_id="NP_415174.1" /db_xref="GI:16128624" /db_xref="ASAP:ABE-0002194" /db_xref="UniProtKB/Swiss-Prot:P0ADC1" /db_xref="ECOCYC:EG10855" /db_xref="EcoGene:EG10855" /db_xref="GeneID:946257" /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN" gene complement(671424..674006) /gene="leuS" /locus_tag="b0642" /gene_synonym="ECK0635; JW0637" /db_xref="ECOCYC:EG10532" /db_xref="EcoGene:EG10532" /db_xref="GeneID:947497" CDS complement(671424..674006) /gene="leuS" /locus_tag="b0642" /gene_synonym="ECK0635; JW0637" /EC_number="6.1.1.4" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="leucine tRNA synthetase" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="NP_415175.1" /db_xref="GI:16128625" /db_xref="ASAP:ABE-0002196" /db_xref="UniProtKB/Swiss-Prot:P07813" /db_xref="ECOCYC:EG10532" /db_xref="EcoGene:EG10532" /db_xref="GeneID:947497" /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKT MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPQY KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA KGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN LVVG" gene 674241..674723 /gene="ybeL" /locus_tag="b0643" /gene_synonym="ECK0636; JW0638" /db_xref="ECOCYC:EG12851" /db_xref="EcoGene:EG12851" /db_xref="GeneID:945252" CDS 674241..674723 /gene="ybeL" /locus_tag="b0643" /gene_synonym="ECK0636; JW0638" /function="phenotype; Not classified" /note="putative alpha helical protein" /codon_start=1 /transl_table=11 /product="conserved protein, DUF1451 family" /protein_id="NP_415176.1" /db_xref="GI:16128626" /db_xref="ASAP:ABE-0002199" /db_xref="UniProtKB/Swiss-Prot:P0AAT9" /db_xref="ECOCYC:EG12851" /db_xref="EcoGene:EG12851" /db_xref="GeneID:945252" /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP" gene complement(674793..675770) /gene="ybeQ" /locus_tag="b0644" /gene_synonym="ECK0637; JW5091" /db_xref="ECOCYC:G6351" /db_xref="EcoGene:EG13647" /db_xref="GeneID:945251" CDS complement(674793..675770) /gene="ybeQ" /locus_tag="b0644" /gene_synonym="ECK0637; JW5091" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415177.4" /db_xref="GI:90111158" /db_xref="ASAP:ABE-0002201" /db_xref="UniProtKB/Swiss-Prot:P77234" /db_xref="ECOCYC:G6351" /db_xref="EcoGene:EG13647" /db_xref="GeneID:945251" /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASN ALGWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGE GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA TAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL" gene 675934..676641 /gene="ybeR" /locus_tag="b0645" /gene_synonym="ECK0638; JW0640" /db_xref="ECOCYC:G6352" /db_xref="EcoGene:EG13648" /db_xref="GeneID:945249" CDS 675934..676641 /gene="ybeR" /locus_tag="b0645" /gene_synonym="ECK0638; JW0640" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415178.1" /db_xref="GI:16128628" /db_xref="ASAP:ABE-0002208" /db_xref="UniProtKB/Swiss-Prot:P77627" /db_xref="ECOCYC:G6352" /db_xref="EcoGene:EG13648" /db_xref="GeneID:945249" /translation="MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS WGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQP LAYYSACPETLKDMSDL" gene 676638..678065 /gene="djlB" /locus_tag="b0646" /gene_synonym="ECK0639; JW0641; ybeS" /db_xref="ECOCYC:G6353" /db_xref="EcoGene:EG13649" /db_xref="GeneID:945245" CDS 676638..678065 /gene="djlB" /locus_tag="b0646" /gene_synonym="ECK0639; JW0641; ybeS" /function="putative enzyme; Not classified" /GO_process="GO:0006457 - protein folding" /note="putative enzyme of polynucleotide modification" /codon_start=1 /transl_table=11 /product="predicted co-chaperone" /protein_id="NP_415179.1" /db_xref="GI:16128629" /db_xref="ASAP:ABE-0002210" /db_xref="UniProtKB/Swiss-Prot:P77381" /db_xref="ECOCYC:G6353" /db_xref="EcoGene:EG13649" /db_xref="GeneID:945245" /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQ AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY CSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENTGEIDEEELESFLYAI AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPQWLTLYLAQHRAVIIPDDAKL HRNLLRWYSAGRLDIPELLDYAQSWRETEPDNEDAPYYEYAQRVYCGEGESLLAELCD YWREYPSTQADALMLQWCRQHRVDYYPLLVMMIEARDLVNDQGKPLLYVPGDSARTRF HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHTLWPLYLVAKQLVQACQPT EESLMPIVSRLDAENRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGC LGIIKIIFYIFIFAGLIGKILHLFG" gene complement(678075..678629) /gene="ybeT" /locus_tag="b0647" /gene_synonym="ECK0640; JW0642" /db_xref="ECOCYC:G6354" /db_xref="EcoGene:EG13650" /db_xref="GeneID:945243" CDS complement(678075..678629) /gene="ybeT" /locus_tag="b0647" /gene_synonym="ECK0640; JW0642" /codon_start=1 /transl_table=11 /product="conserved protein, Sel1 family" /protein_id="NP_415180.1" /db_xref="GI:16128630" /db_xref="ASAP:ABE-0002213" /db_xref="UniProtKB/Swiss-Prot:P77296" /db_xref="ECOCYC:G6354" /db_xref="EcoGene:EG13650" /db_xref="GeneID:945243" /translation="MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSP GSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRA QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQ KWLKLTAKQHYKNAERLLAGLPAH" gene 678731..679438 /gene="ybeU" /locus_tag="b0648" /gene_synonym="ECK0641; JW0643" /db_xref="ECOCYC:G6355" /db_xref="EcoGene:EG13651" /db_xref="GeneID:945244" CDS 678731..679438 /gene="ybeU" /locus_tag="b0648" /gene_synonym="ECK0641; JW0643" /function="putative enzyme; Not classified" /note="putative tRNA ligase" /codon_start=1 /transl_table=11 /product="conserved protein, DUF1266 family" /protein_id="NP_415181.1" /db_xref="GI:16128631" /db_xref="ASAP:ABE-0002220" /db_xref="UniProtKB/Swiss-Prot:P77427" /db_xref="ECOCYC:G6355" /db_xref="EcoGene:EG13651" /db_xref="GeneID:945244" /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFELSSS WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFV AQTAMCCGEGGIKAWDYVRMGFLSRVGVLNKWLTEEESLWLQSRVYVRAHHYYHSWMH YFSAYSLGRLYWQSSQCEDNTSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQP LTVQSECPVTLKDVSDL" gene 679435..680886 /gene="djlC" /locus_tag="b0649" /gene_synonym="ECK0642; hscD; JW0644; ybeV" /db_xref="ECOCYC:G6356" /db_xref="EcoGene:EG13652" /db_xref="GeneID:945253" CDS 679435..680886 /gene="djlC" /locus_tag="b0649" /gene_synonym="ECK0642; hscD; JW0644; ybeV" /codon_start=1 /transl_table=11 /product="Hsc56 co-chaperone of HscC" /protein_id="NP_415182.1" /db_xref="GI:16128632" /db_xref="ASAP:ABE-0002222" /db_xref="UniProtKB/Swiss-Prot:P77359" /db_xref="ECOCYC:G6356" /db_xref="EcoGene:EG13652" /db_xref="GeneID:945253" /translation="MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQ AYEEALRLAVNPVEEADDEEKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNT WNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI QAGDCFDFLSLLEYPIALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWLIPDDAKL HRKLLRWYSSVQTGMAELIPVAQQWQTEEPESEDARYYLCAQRLYCGEGESLLADLCA YWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQPLKYVPGESARTRL LWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEQDSPFLDLYRVAEQVVL EAFPKQEMLARLNTRLEGGDAHPLEAIVTRMLLTKVKLEPEDEDVDEPTPENHEEKND EGEKPQSITSIIKISLTVLVIGYALGKIAMLFS" repeat_region 680908..680937 /note="REP57 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(680946..682616) /gene="hscC" /locus_tag="b0650" /gene_synonym="ECK0643; JW0645; ybeW" /db_xref="ECOCYC:G6357" /db_xref="EcoGene:EG13653" /db_xref="GeneID:945218" CDS complement(680946..682616) /gene="hscC" /locus_tag="b0650" /gene_synonym="ECK0643; JW0645; ybeW" /function="putative enzyme; Not classified" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription" /protein_id="NP_415183.1" /db_xref="GI:16128633" /db_xref="ASAP:ABE-0002225" /db_xref="UniProtKB/Swiss-Prot:P77319" /db_xref="ECOCYC:G6357" /db_xref="EcoGene:EG13653" /db_xref="GeneID:945218" /translation="MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRA DVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLL NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL LEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEE LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP" gene complement(682700..683635) /gene="rihA" /locus_tag="b0651" /gene_synonym="ECK0644; JW0646; ybeK" /db_xref="ECOCYC:G6358" /db_xref="EcoGene:EG12701" /db_xref="GeneID:945503" CDS complement(682700..683635) /gene="rihA" /locus_tag="b0651" /gene_synonym="ECK0644; JW0646; ybeK" /EC_number="3.2.2.-" /function="orf; Not classified" /GO_process="GO:0009226 - nucleotide-sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="ribonucleoside hydrolase 1" /protein_id="NP_415184.1" /db_xref="GI:16128634" /db_xref="ASAP:ABE-0002227" /db_xref="UniProtKB/Swiss-Prot:P41409" /db_xref="ECOCYC:G6358" /db_xref="EcoGene:EG12701" /db_xref="GeneID:945503" /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAE LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVV DYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA" gene complement(683753..684478) /gene="gltL" /locus_tag="b0652" /gene_synonym="ECK0645; JW0647" /db_xref="ECOCYC:EG12663" /db_xref="EcoGene:EG12663" /db_xref="GeneID:945254" CDS complement(683753..684478) /gene="gltL" /locus_tag="b0652" /gene_synonym="ECK0645; JW0647" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006532 - aspartate biosynthetic process; GO:0006537 - glutamate biosynthetic process" /note="ATP-binding protein of glutamate/aspartate transport system" /codon_start=1 /transl_table=11 /product="glutamate and aspartate transporter subunit" /protein_id="NP_415185.1" /db_xref="GI:16128635" /db_xref="ASAP:ABE-0002232" /db_xref="UniProtKB/Swiss-Prot:P0AAG3" /db_xref="ECOCYC:EG12663" /db_xref="EcoGene:EG12663" /db_xref="GeneID:945254" /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS PKDAFFDDPKSDRAKDFLAKILH" gene complement(684478..685152) /gene="gltK" /locus_tag="b0653" /gene_synonym="ECK0646; JW0648" /db_xref="ECOCYC:EG12662" /db_xref="EcoGene:EG12662" /db_xref="GeneID:947354" CDS complement(684478..685152) /gene="gltK" /locus_tag="b0653" /gene_synonym="ECK0646; JW0648" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006532 - aspartate biosynthetic process; GO:0006537 - glutamate biosynthetic process" /note="glutamate/aspartate transport system permease; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="glutamate and aspartate transporter subunit" /protein_id="NP_415186.1" /db_xref="GI:16128636" /db_xref="ASAP:ABE-0002234" /db_xref="UniProtKB/Swiss-Prot:P0AER5" /db_xref="ECOCYC:EG12662" /db_xref="EcoGene:EG12662" /db_xref="GeneID:947354" /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM RLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY LKRRTA" gene complement(685152..685892) /gene="gltJ" /locus_tag="b0654" /gene_synonym="ECK0647; JW0649" /db_xref="ECOCYC:EG12661" /db_xref="EcoGene:EG12661" /db_xref="GeneID:945443" CDS complement(685152..685892) /gene="gltJ" /locus_tag="b0654" /gene_synonym="ECK0647; JW0649" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006532 - aspartate biosynthetic process; GO:0006537 - glutamate biosynthetic process" /note="glutamate/aspartate transport system permease; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="glutamate and aspartate transporter subunit" /protein_id="NP_415187.1" /db_xref="GI:16128637" /db_xref="ASAP:ABE-0002239" /db_xref="UniProtKB/Swiss-Prot:P0AER3" /db_xref="ECOCYC:EG12661" /db_xref="EcoGene:EG12661" /db_xref="GeneID:945443" /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA YVLINAFIMLVMTLVERKVRLPGNMGGK" repeat_region 685973..685997 /note="REP58 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(686062..686970) /gene="gltI" /locus_tag="b0655" /gene_synonym="ECK0648; JW5092; ybeJ; yzzK" /db_xref="ECOCYC:G6359" /db_xref="EcoGene:EG12700" /db_xref="GeneID:946938" CDS complement(686062..686970) /gene="gltI" /locus_tag="b0655" /gene_synonym="ECK0648; JW5092; ybeJ; yzzK" /function="putative transport; Not classified" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006537 - glutamate biosynthetic process" /note="periplasmic-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="glutamate and aspartate transporter subunit" /protein_id="NP_415188.1" /db_xref="GI:16128638" /db_xref="ASAP:ABE-0002241" /db_xref="UniProtKB/Swiss-Prot:P37902" /db_xref="ECOCYC:G6359" /db_xref="EcoGene:EG12700" /db_xref="GeneID:946938" /translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTS GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK PDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP KNLNMNFELSDEMKALFKEPNDKALN" mat_peptide complement(686065..686904) /gene="gltI" /locus_tag="b0655" /gene_synonym="ECK0648; JW5092; ybeJ; yzzK" /product="glutamate and aspartate transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 8740179,10972807" repeat_region complement(687074..688268) /mobile_element="insertion sequence:IS5D" gene complement(687220..688236) /gene="insH" /locus_tag="b0656" /gene_synonym="ECK0261" /db_xref="ECOCYC:G6360" /db_xref="EcoGene:EG40008" /db_xref="GeneID:944917" CDS complement(687220..688236) /gene="insH" /locus_tag="b0656" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="NP_415189.1" /db_xref="GI:16128639" /db_xref="ASAP:ABE-0002246" /db_xref="ECOCYC:G6360" /db_xref="EcoGene:EG40008" /db_xref="GeneID:944917" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" repeat_region 688487..688520 /note="REP59 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(688566..690104) /gene="lnt" /locus_tag="b0657" /gene_synonym="cutE; ECK0649; JW0654" /db_xref="ECOCYC:EG10168" /db_xref="EcoGene:EG10168" /db_xref="GeneID:946201" CDS complement(688566..690104) /gene="lnt" /locus_tag="b0657" /gene_synonym="cutE; ECK0649; JW0654" /EC_number="2.3.1.-" /function="enzyme; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042158 - lipoprotein biosynthetic process" /note="apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="NP_415190.1" /db_xref="GI:16128640" /db_xref="ASAP:ABE-0002250" /db_xref="UniProtKB/Swiss-Prot:P23930" /db_xref="ECOCYC:EG10168" /db_xref="EcoGene:EG10168" /db_xref="GeneID:946201" /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP EKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIIL GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR QRRK" gene complement(690129..691007) /gene="ybeX" /locus_tag="b0658" /gene_synonym="corC; ECK0650; JW0655" /db_xref="ECOCYC:G6361" /db_xref="EcoGene:EG13654" /db_xref="GeneID:946417" CDS complement(690129..691007) /gene="ybeX" /locus_tag="b0658" /gene_synonym="corC; ECK0650; JW0655" /function="putative transport; Not classified" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicteed ion transport" /protein_id="NP_415191.1" /db_xref="GI:16128641" /db_xref="ASAP:ABE-0002252" /db_xref="UniProtKB/Swiss-Prot:P0AE78" /db_xref="ECOCYC:G6361" /db_xref="EcoGene:EG13654" /db_xref="GeneID:946417" /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ VHVKIPDDSPQPKLDE" gene complement(691097..691564) /gene="ybeY" /locus_tag="b0659" /gene_synonym="ECK0651; JW0656" /db_xref="ECOCYC:G6362" /db_xref="EcoGene:EG13655" /db_xref="GeneID:946430" CDS complement(691097..691564) /gene="ybeY" /locus_tag="b0659" /gene_synonym="ECK0651; JW0656" /codon_start=1 /transl_table=11 /product="metal-binding heat shock protein required for translation at 42 degrees" /protein_id="NP_415192.1" /db_xref="GI:16128642" /db_xref="ASAP:ABE-0002255" /db_xref="UniProtKB/Swiss-Prot:P0A898" /db_xref="ECOCYC:G6362" /db_xref="EcoGene:EG13655" /db_xref="GeneID:946430" /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE" gene complement(691561..692601) /gene="ybeZ" /locus_tag="b0660" /gene_synonym="ECK0652; JW0657; phoL" /db_xref="ECOCYC:G6363" /db_xref="EcoGene:EG13656" /db_xref="GeneID:948044" CDS complement(691561..692601) /gene="ybeZ" /locus_tag="b0660" /gene_synonym="ECK0652; JW0657; phoL" /function="putative transport; Not classified" /note="putative ATP-binding protein in pho regulon" /codon_start=1 /transl_table=11 /product="predicted protein with nucleoside triphosphate hydrolase domain" /protein_id="NP_415193.2" /db_xref="GI:145698230" /db_xref="ASAP:ABE-0002257" /db_xref="UniProtKB/Swiss-Prot:P0A9K3" /db_xref="ECOCYC:G6363" /db_xref="EcoGene:EG13656" /db_xref="GeneID:948044" /translation="MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRD NHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESV PEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIER NVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL PRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAAL AAERKREEQEQK" gene complement(692754..694178) /gene="miaB" /locus_tag="b0661" /gene_synonym="ECK0653; JW0658; yleA" /db_xref="ECOCYC:G6364" /db_xref="EcoGene:EG13657" /db_xref="GeneID:945260" CDS complement(692754..694178) /gene="miaB" /locus_tag="b0661" /gene_synonym="ECK0653; JW0658; yleA" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA-i(6)A37 methylthiotransferase" /protein_id="NP_415194.1" /db_xref="GI:16128644" /db_xref="ASAP:ABE-0002260" /db_xref="UniProtKB/Swiss-Prot:P0AEI1" /db_xref="ECOCYC:G6364" /db_xref="EcoGene:EG13657" /db_xref="GeneID:945260" /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSF ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV AETPESVIARTRKENDLGVGYYQP" gene 694324..695499 /gene="ubiF" /locus_tag="b0662" /gene_synonym="ECK0654; JW0659; yleB" /db_xref="ECOCYC:G6365" /db_xref="EcoGene:EG13658" /db_xref="GeneID:945261" CDS 694324..695499 /gene="ubiF" /locus_tag="b0662" /gene_synonym="ECK0654; JW0659; yleB" /EC_number="1.14.13.-" /codon_start=1 /transl_table=11 /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase" /protein_id="NP_415195.1" /db_xref="GI:16128645" /db_xref="ASAP:ABE-0002265" /db_xref="UniProtKB/Swiss-Prot:P75728" /db_xref="ECOCYC:G6365" /db_xref="EcoGene:EG13658" /db_xref="GeneID:945261" /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFAVTVIEHAEPAPFVA DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRHDDLQELELKGGEVIRAKL VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL FDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFMRNLGLMAAERAGVLKRQALKYALGL" repeat_region 695530..695600 /note="REP60 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(695653..695727) /gene="glnX" /locus_tag="b0664" /gene_synonym="ECK0655; glnVbeta; JWR0011; supE" /db_xref="ECOCYC:EG30031" /db_xref="EcoGene:EG30031" /db_xref="GeneID:945257" tRNA complement(695653..695727) /gene="glnX" /locus_tag="b0664" /gene_synonym="ECK0655; glnVbeta; JWR0011; supE" /product="tRNA-Gln" /note="anticodon: CUG" /db_xref="ASAP:ABE-0002272" /db_xref="ECOCYC:EG30031" /db_xref="EcoGene:EG30031" /db_xref="GeneID:945257" gene complement(695765..695839) /gene="glnV" /locus_tag="b0665" /gene_synonym="ECK0656; glnValpha; JWR0012; Su2; suII; supE" /db_xref="ECOCYC:EG30029" /db_xref="EcoGene:EG30029" /db_xref="GeneID:945255" tRNA complement(695765..695839) /gene="glnV" /locus_tag="b0665" /gene_synonym="ECK0656; glnValpha; JWR0012; Su2; suII; supE" /product="tRNA-Gln" /note="anticodon: CUG" /db_xref="ASAP:ABE-0002274" /db_xref="ECOCYC:EG30029" /db_xref="EcoGene:EG30029" /db_xref="GeneID:945255" gene complement(695887..695963) /gene="metU" /locus_tag="b0666" /gene_synonym="ECK0657; JWR0013; metTbeta" /db_xref="ECOCYC:EG30059" /db_xref="EcoGene:EG30059" /db_xref="GeneID:945262" tRNA complement(695887..695963) /gene="metU" /locus_tag="b0666" /gene_synonym="ECK0657; JWR0013; metTbeta" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0002276" /db_xref="ECOCYC:EG30059" /db_xref="EcoGene:EG30059" /db_xref="GeneID:945262" gene complement(695979..696053) /gene="glnW" /locus_tag="b0668" /gene_synonym="ECK0658; glnUbeta; JWR0014" /db_xref="ECOCYC:EG30030" /db_xref="EcoGene:EG30030" /db_xref="GeneID:945750" tRNA complement(695979..696053) /gene="glnW" /locus_tag="b0668" /gene_synonym="ECK0658; glnUbeta; JWR0014" /product="tRNA-Gln" /note="anticodon: UUG" /db_xref="ASAP:ABE-0002280" /db_xref="ECOCYC:EG30030" /db_xref="EcoGene:EG30030" /db_xref="GeneID:945750" gene complement(696088..696162) /gene="glnU" /locus_tag="b0670" /gene_synonym="ECK0659; glnUalpha; JWR0015; supB" /db_xref="ECOCYC:EG30028" /db_xref="EcoGene:EG30028" /db_xref="GeneID:945269" tRNA complement(696088..696162) /gene="glnU" /locus_tag="b0670" /gene_synonym="ECK0659; glnUalpha; JWR0015; supB" /product="tRNA-Gln" /note="anticodon: UUG" /db_xref="ASAP:ABE-0002284" /db_xref="ECOCYC:EG30028" /db_xref="EcoGene:EG30028" /db_xref="GeneID:945269" gene complement(696186..696270) /gene="leuW" /locus_tag="b0672" /gene_synonym="ECK0660; feeB; JWR0016" /db_xref="ECOCYC:EG30052" /db_xref="EcoGene:EG30052" /db_xref="GeneID:945264" tRNA complement(696186..696270) /gene="leuW" /locus_tag="b0672" /gene_synonym="ECK0660; feeB; JWR0016" /product="tRNA-Leu" /note="anticodon: CAA" /db_xref="ASAP:ABE-0002288" /db_xref="ECOCYC:EG30052" /db_xref="EcoGene:EG30052" /db_xref="GeneID:945264" gene complement(696280..696356) /gene="metT" /locus_tag="b0673" /gene_synonym="ECK0661; JWR0017; metTalpha" /db_xref="ECOCYC:EG30058" /db_xref="EcoGene:EG30058" /db_xref="GeneID:945280" tRNA complement(696280..696356) /gene="metT" /locus_tag="b0673" /gene_synonym="ECK0661; JWR0017; metTalpha" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0002290" /db_xref="ECOCYC:EG30058" /db_xref="EcoGene:EG30058" /db_xref="GeneID:945280" gene complement(696736..698400) /gene="asnB" /locus_tag="b0674" /gene_synonym="ECK0662; JW0660" /db_xref="ECOCYC:EG10092" /db_xref="EcoGene:EG10092" /db_xref="GeneID:945281" CDS complement(696736..698400) /gene="asnB" /locus_tag="b0674" /gene_synonym="ECK0662; JW0660" /EC_number="6.3.5.4" /function="enzyme; Amino acid biosynthesis: Asparagine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006529 - asparagine biosynthetic process; GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="asparagine synthetase B" /protein_id="NP_415200.1" /db_xref="GI:16128650" /db_xref="ASAP:ABE-0002292" /db_xref="UniProtKB/Swiss-Prot:P22106" /db_xref="ECOCYC:EG10092" /db_xref="EcoGene:EG10092" /db_xref="GeneID:945281" /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS EMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALED SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFEAYLPASVAWRQK EQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPL PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK" mat_peptide complement(696739..698397) /gene="asnB" /locus_tag="b0674" /gene_synonym="ECK0662; JW0660" /product="asparagine synthetase B" /experiment="N-terminus verified by Edman degradation: PMID 7907328" repeat_region 698648..698745 /note="RIP61 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(698797..699549) /gene="nagD" /locus_tag="b0675" /gene_synonym="ECK0663; JW0661" /db_xref="ECOCYC:EG10634" /db_xref="EcoGene:EG10634" /db_xref="GeneID:945283" CDS complement(698797..699549) /gene="nagD" /locus_tag="b0675" /gene_synonym="ECK0663; JW0661" /function="enzyme; Central intermediary metabolism: Amino sugars" /GO_process="GO:0046349 - amino sugar biosynthetic process" /note="N-acetylglucosamine metabolism" /codon_start=1 /transl_table=11 /product="UMP phosphatase" /protein_id="NP_415201.1" /db_xref="GI:16128651" /db_xref="ASAP:ABE-0002296" /db_xref="UniProtKB/Swiss-Prot:P0AF24" /db_xref="ECOCYC:EG10634" /db_xref="EcoGene:EG10634" /db_xref="GeneID:945283" /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA GFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI LVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI" gene complement(699597..700817) /gene="nagC" /locus_tag="b0676" /gene_synonym="ECK0664; JW0662; nagR" /db_xref="ECOCYC:EG10636" /db_xref="EcoGene:EG10636" /db_xref="GeneID:945285" CDS complement(699597..700817) /gene="nagC" /locus_tag="b0676" /gene_synonym="ECK0664; JW0662; nagR" /function="regulator; Central intermediary metabolism: Amino sugars" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0046349 - amino sugar biosynthetic process; GO:0006350 - transcription; GO:0009386 - translational attenuation" /note="transcriptional repressor of nag (N-acetylglucosamine) operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine" /protein_id="NP_415202.1" /db_xref="GI:16128652" /db_xref="ASAP:ABE-0002299" /db_xref="UniProtKB/Swiss-Prot:P0AF20" /db_xref="ECOCYC:EG10636" /db_xref="EcoGene:EG10636" /db_xref="GeneID:945285" /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR AMLNGILLQHLLEN" gene complement(700826..701974) /gene="nagA" /locus_tag="b0677" /gene_synonym="ECK0665; JW0663" /db_xref="ECOCYC:EG10632" /db_xref="EcoGene:EG10632" /db_xref="GeneID:945289" CDS complement(700826..701974) /gene="nagA" /locus_tag="b0677" /gene_synonym="ECK0665; JW0663" /EC_number="3.5.1.25" /function="enzyme; Central intermediary metabolism: Amino sugars" /GO_process="GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate deacetylase" /protein_id="NP_415203.1" /db_xref="GI:16128653" /db_xref="ASAP:ABE-0002301" /db_xref="UniProtKB/Swiss-Prot:P0AF18" /db_xref="ECOCYC:EG10632" /db_xref="EcoGene:EG10632" /db_xref="GeneID:945289" /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT SDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ" gene complement(702034..702834) /gene="nagB" /locus_tag="b0678" /gene_synonym="ECK0666; glmD; JW0664" /db_xref="ECOCYC:EG10633" /db_xref="EcoGene:EG10633" /db_xref="GeneID:945290" CDS complement(702034..702834) /gene="nagB" /locus_tag="b0678" /gene_synonym="ECK0666; glmD; JW0664" /EC_number="3.5.99.6" /function="enzyme; Central intermediary metabolism: Amino sugars" /GO_process="GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="glucosamine-6-phosphate deaminase" /protein_id="NP_415204.1" /db_xref="GI:16128654" /db_xref="ASAP:ABE-0002304" /db_xref="UniProtKB/Swiss-Prot:P0A759" /db_xref="ECOCYC:EG10633" /db_xref="EcoGene:EG10633" /db_xref="GeneID:945290" /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL" gene 703167..705113 /gene="nagE" /locus_tag="b0679" /gene_synonym="ECK0667; JW0665; pstN; ptsN" /db_xref="ECOCYC:EG10635" /db_xref="EcoGene:EG10635" /db_xref="GeneID:945292" CDS 703167..705113 /gene="nagE" /locus_tag="b0679" /gene_synonym="ECK0667; JW0665; pstN; ptsN" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009310 - amine catabolic process; GO:0046349 - amino sugar biosynthetic process" /note="PTS system, N-acetylglucosamine-specific enzyme IIABC" /codon_start=1 /transl_table=11 /product="fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components" /protein_id="NP_415205.1" /db_xref="GI:16128655" /db_xref="ASAP:ABE-0002312" /db_xref="UniProtKB/Swiss-Prot:P09323" /db_xref="ECOCYC:EG10635" /db_xref="EcoGene:EG10635" /db_xref="GeneID:945292" /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS QNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQL ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI VGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGD VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD FSGLIIKAQGHIVAGQTPLYEIKK" repeat_region 705120..705155 /note="REP62 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 705316..706980 /gene="glnS" /locus_tag="b0680" /gene_synonym="ECK0668; JW0666" /db_xref="ECOCYC:EG10390" /db_xref="EcoGene:EG10390" /db_xref="GeneID:945310" CDS 705316..706980 /gene="glnS" /locus_tag="b0680" /gene_synonym="ECK0668; JW0666" /EC_number="6.1.1.18" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="glutamine tRNA synthetase" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /protein_id="NP_415206.1" /db_xref="GI:16128656" /db_xref="ASAP:ABE-0002317" /db_xref="UniProtKB/Swiss-Prot:P00962" /db_xref="ECOCYC:EG10390" /db_xref="EcoGene:EG10390" /db_xref="GeneID:945310" /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRAD FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE" mat_peptide 705319..706977 /gene="glnS" /locus_tag="b0680" /gene_synonym="ECK0668; JW0666" /product="glutamyl-tRNA synthetase" /experiment="N-terminus verified by Edman degradation: PMID 6749844,9298646" repeat_region 706993..707157 /note="RIP63 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site" gene 707557..708963 /gene="chiP" /locus_tag="b0681" /gene_synonym="ECK0669; JW0667; ybfM" /db_xref="ECOCYC:G6370" /db_xref="EcoGene:EG13659" /db_xref="GeneID:945296" CDS 707557..708963 /gene="chiP" /locus_tag="b0681" /gene_synonym="ECK0669; JW0667; ybfM" /codon_start=1 /transl_table=11 /product="chitoporin, uptake of chitosugars" /protein_id="NP_415207.1" /db_xref="GI:16128657" /db_xref="ASAP:ABE-0002323" /db_xref="UniProtKB/Swiss-Prot:P75733" /db_xref="ECOCYC:G6370" /db_xref="EcoGene:EG13659" /db_xref="GeneID:945296" /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAEN GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV DYLHSFGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPTYAS SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQS NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI FQDERDVKFMVIAPFTIF" gene 709013..709339 /gene="chiQ" /locus_tag="b0682" /gene_synonym="ECK0670; JW0668; ybfN" /db_xref="ECOCYC:G6371" /db_xref="EcoGene:EG13660" /db_xref="GeneID:945713" CDS 709013..709339 /gene="chiQ" /locus_tag="b0682" /gene_synonym="ECK0670; JW0668; ybfN" /codon_start=1 /transl_table=11 /product="novel lipoprotein induced by chitosugars" /protein_id="NP_415208.1" /db_xref="GI:16128658" /db_xref="ASAP:ABE-0002325" /db_xref="UniProtKB/Swiss-Prot:P75734" /db_xref="ECOCYC:G6371" /db_xref="EcoGene:EG13660" /db_xref="GeneID:945713" /translation="MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP EKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE IRSNNK" gene complement(709423..709869) /gene="fur" /locus_tag="b0683" /gene_synonym="ECK0671; JW0669" /db_xref="ECOCYC:EG10359" /db_xref="EcoGene:EG10359" /db_xref="GeneID:945295" CDS complement(709423..709869) /gene="fur" /locus_tag="b0683" /gene_synonym="ECK0671; JW0669" /function="regulator; Global regulatory functions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="negative regulator" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport" /protein_id="NP_415209.1" /db_xref="GI:16128659" /db_xref="ASAP:ABE-0002327" /db_xref="UniProtKB/Swiss-Prot:P0A9A9" /db_xref="ECOCYC:EG10359" /db_xref="EcoGene:EG10359" /db_xref="GeneID:945295" /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK" gene complement(709862..709948) /gene="uof" /locus_tag="b4637" /gene_synonym="ECK4461" /db_xref="ECOCYC:G0-10580" /db_xref="EcoGene:EG14465" /db_xref="GeneID:5625562" CDS complement(709862..709948) /gene="uof" /locus_tag="b4637" /gene_synonym="ECK4461" /codon_start=1 /transl_table=11 /product="ryhB-regulated fur leader peptide" /protein_id="YP_001491546.1" /db_xref="GI:157783150" /db_xref="ECOCYC:G0-10580" /db_xref="EcoGene:EG14465" /db_xref="GeneID:5625562" /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD" repeat_region 710131..710163 /note="REP64 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(710158..710688) /gene="fldA" /locus_tag="b0684" /gene_synonym="ECK0672; JW0671" /db_xref="ECOCYC:EG10318" /db_xref="EcoGene:EG10318" /db_xref="GeneID:945293" CDS complement(710158..710688) /gene="fldA" /locus_tag="b0684" /gene_synonym="ECK0672; JW0671" /function="enzyme; Energy metabolism, carbon: Electron transport" /codon_start=1 /transl_table=11 /product="flavodoxin 1" /protein_id="NP_415210.1" /db_xref="GI:16128660" /db_xref="ASAP:ABE-0002332" /db_xref="UniProtKB/Swiss-Prot:P61949" /db_xref="ECOCYC:EG10318" /db_xref="EcoGene:EG10318" /db_xref="GeneID:945293" /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW VKQISEELHLDEILNA" mat_peptide complement(710161..710685) /gene="fldA" /locus_tag="b0684" /gene_synonym="ECK0672; JW0671" /product="flavodoxin 1" /experiment="N-terminus verified by Edman degradation: PMID 1999390,7642583,7961651,8076639" gene complement(710828..711121) /gene="ybfE" /locus_tag="b0685" /gene_synonym="ECK0673; JW5816" /db_xref="ECOCYC:EG11775" /db_xref="EcoGene:EG11775" /db_xref="GeneID:945291" CDS complement(710828..711121) /gene="ybfE" /locus_tag="b0685" /gene_synonym="ECK0673; JW5816" /GO_process="GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="LexA-regulated conserved protein" /protein_id="NP_415211.2" /db_xref="GI:90111159" /db_xref="ASAP:ABE-0002335" /db_xref="UniProtKB/Swiss-Prot:P0AAU7" /db_xref="ECOCYC:EG11775" /db_xref="EcoGene:EG11775" /db_xref="GeneID:945291" /translation="MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKR DKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV" gene complement(711261..712025) /gene="ybfF" /locus_tag="b0686" /gene_synonym="ECK0674; JW0673" /db_xref="ECOCYC:EG11776" /db_xref="EcoGene:EG11776" /db_xref="GeneID:945288" CDS complement(711261..712025) /gene="ybfF" /locus_tag="b0686" /gene_synonym="ECK0674; JW0673" /codon_start=1 /transl_table=11 /product="acyl-CoA esterase in vitro" /protein_id="NP_415212.1" /db_xref="GI:16128662" /db_xref="ASAP:ABE-0002337" /db_xref="UniProtKB/Swiss-Prot:P75736" /db_xref="ECOCYC:EG11776" /db_xref="EcoGene:EG11776" /db_xref="GeneID:945288" /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA SDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLL AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND" gene 712210..712755 /gene="seqA" /locus_tag="b0687" /gene_synonym="ECK0675; JW0674" /db_xref="ECOCYC:EG12197" /db_xref="EcoGene:EG12197" /db_xref="GeneID:945272" CDS 712210..712755 /gene="seqA" /locus_tag="b0687" /gene_synonym="ECK0675; JW0674" /function="regulator; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 7553853" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006261 - DNA-dependent DNA replication" /note="negative modulator of initiation of replication" /codon_start=1 /transl_table=11 /product="regulatory protein for replication initiation" /protein_id="NP_415213.1" /db_xref="GI:16128663" /db_xref="ASAP:ABE-0002343" /db_xref="UniProtKB/Swiss-Prot:P0AFY8" /db_xref="ECOCYC:EG12197" /db_xref="EcoGene:EG12197" /db_xref="GeneID:945272" /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP VTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI EHIMQSMQFPAELIEKVCGTI" gene 712781..714421 /gene="pgm" /locus_tag="b0688" /gene_synonym="blu; ECK0676; JW0675; pgmA" /db_xref="ECOCYC:EG12144" /db_xref="EcoGene:EG12144" /db_xref="GeneID:945271" CDS 712781..714421 /gene="pgm" /locus_tag="b0688" /gene_synonym="blu; ECK0676; JW0675; pgmA" /EC_number="5.4.2.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0006006 - glucose metabolic process" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /protein_id="NP_415214.1" /db_xref="GI:16128664" /db_xref="ASAP:ABE-0002345" /db_xref="UniProtKB/Swiss-Prot:P36938" /db_xref="ECOCYC:EG12144" /db_xref="EcoGene:EG12144" /db_xref="GeneID:945271" /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA" repeat_region 714487..714584 /note="RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 714635..715129 /gene="ybfP" /locus_tag="b0689" /gene_synonym="ECK0677; JW0676" /db_xref="ECOCYC:G6374" /db_xref="EcoGene:EG14158" /db_xref="GeneID:945274" CDS 714635..715129 /gene="ybfP" /locus_tag="b0689" /gene_synonym="ECK0677; JW0676" /function="putative enzyme; Not classified" /note="putative pectinase" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="NP_415215.1" /db_xref="GI:16128665" /db_xref="ASAP:ABE-0002350" /db_xref="UniProtKB/Swiss-Prot:P75737" /db_xref="ECOCYC:G6374" /db_xref="EcoGene:EG14158" /db_xref="GeneID:945274" /translation="MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTR GLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPG WQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA INTH" gene complement(715170..715820) /gene="ybfG" /locus_tag="b0691" /old_locus_tag="b0690" /gene_synonym="ECK0678; JW5094; ybfH" /pseudo /db_xref="EcoGene:EG11777" /db_xref="GeneID:945287" CDS complement(715170..715820) /gene="ybfG" /locus_tag="b0691" /old_locus_tag="b0690" /gene_synonym="ECK0678; JW5094; ybfH" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002352" /db_xref="ASAP:ABE-0002355" /db_xref="UniProtKB/Swiss-Prot:P37003" /db_xref="EcoGene:EG11777" /db_xref="GeneID:945287" gene complement(715944..716093) /gene="ybfI" /locus_tag="b4636" /gene_synonym="ECK4436" /pseudo /db_xref="EcoGene:EG12390" /db_xref="GeneID:5625563" CDS complement(715944..716093) /gene="ybfI" /locus_tag="b4636" /gene_synonym="ECK4436" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="UniProtKB/Swiss-Prot:P39901" /db_xref="EcoGene:EG12390" /db_xref="GeneID:5625563" gene complement(716169..717488) /gene="potE" /locus_tag="b0692" /gene_synonym="ECK0680; JW0679" /db_xref="ECOCYC:EG10753" /db_xref="EcoGene:EG10753" /db_xref="GeneID:945422" CDS complement(716169..717488) /gene="potE" /locus_tag="b0692" /gene_synonym="ECK0680; JW0679" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0015496 - putrescine:ornithine antiporter activity" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process; GO:0006970 - response to osmotic stress" /note="putrescine transport protein" /codon_start=1 /transl_table=11 /product="putrescine/proton symporter: putrescine/ornithine antiporter" /protein_id="NP_415219.1" /db_xref="GI:16128668" /db_xref="ASAP:ABE-0002360" /db_xref="UniProtKB/Swiss-Prot:P0AAF1" /db_xref="ECOCYC:EG10753" /db_xref="EcoGene:EG10753" /db_xref="GeneID:945422" /translation="MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIIS WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA IAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIP VVGLCIIGWFWFSPTLYVDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVEN PERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKV IMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQS GLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVA FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG" gene complement(717485..719683) /gene="speF" /locus_tag="b0693" /gene_synonym="ECK0681; JW0680" /db_xref="ECOCYC:EG10964" /db_xref="EcoGene:EG10964" /db_xref="GeneID:945297" CDS complement(717485..719683) /gene="speF" /locus_tag="b0693" /gene_synonym="ECK0681; JW0680" /EC_number="4.1.1.17" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /GO_process="GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="ornithine decarboxylase isozyme, inducible" /protein_id="NP_415220.1" /db_xref="GI:16128669" /db_xref="ASAP:ABE-0002362" /db_xref="UniProtKB/Swiss-Prot:P24169" /db_xref="ECOCYC:EG10964" /db_xref="EcoGene:EG10964" /db_xref="GeneID:945297" /translation="MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVT CGKLDEIDATGYGIPVFIATENQERVPAEYLPRISGVFENCESRREFYGRQLETAASH YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLC NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQR AKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCS PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH ASTSPFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELV DGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNG EYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL ESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKEHFPRV SMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL" gene 719806..720063 /gene="ybfK" /locus_tag="b4590" /gene_synonym="ECK4400" /db_xref="ECOCYC:G0-10586" /db_xref="EcoGene:EG12869" /db_xref="GeneID:948953" CDS 719806..720063 /gene="ybfK" /locus_tag="b4590" /gene_synonym="ECK4400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001165310.1" /db_xref="GI:145698231" /db_xref="UniProtKB/Swiss-Prot:P46121" /db_xref="ECOCYC:G0-10586" /db_xref="EcoGene:EG12869" /db_xref="GeneID:948953" /translation="MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVG RLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS" gene complement(720279..720956) /gene="kdpE" /locus_tag="b0694" /gene_synonym="ECK0682; JW5096" /db_xref="ECOCYC:EG10517" /db_xref="EcoGene:EG10517" /db_xref="GeneID:945302" CDS complement(720279..720956) /gene="kdpE" /locus_tag="b0694" /gene_synonym="ECK0682; JW5096" /function="regulator; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 1630317" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="regulator of kdp operon (transcriptional effector)" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator in two-component regulatory system with KdpD" /protein_id="NP_415222.1" /db_xref="GI:16128670" /db_xref="ASAP:ABE-0002366" /db_xref="UniProtKB/Swiss-Prot:P21866" /db_xref="ECOCYC:EG10517" /db_xref="EcoGene:EG10517" /db_xref="GeneID:945302" /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATR KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP FGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG IGYRFML" gene complement(720953..723637) /gene="kdpD" /locus_tag="b0695" /gene_synonym="ECK0683; JW0683; kac" /db_xref="ECOCYC:EG10516" /db_xref="EcoGene:EG10516" /db_xref="GeneID:946744" CDS complement(720953..723637) /gene="kdpD" /locus_tag="b0695" /gene_synonym="ECK0683; JW0683; kac" /function="enzyme; Global regulatory functions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006464 - protein modification process" /note="sensor for high-affinity potassium transport system; sensory histidine kinase" /codon_start=1 /transl_table=11 /product="fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein" /protein_id="NP_415223.1" /db_xref="GI:16128671" /db_xref="ASAP:ABE-0002368" /db_xref="UniProtKB/Swiss-Prot:P21865" /db_xref="ECOCYC:EG10516" /db_xref="EcoGene:EG10516" /db_xref="GeneID:946744" /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE AQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDLDAALARR PALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDNRSFK DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR EQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVLLPDDNGKLQPLTHPQG MTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM" gene complement(723630..724202) /gene="kdpC" /locus_tag="b0696" /gene_synonym="ECK0684; JW0684; kac" /db_xref="ECOCYC:EG10515" /db_xref="EcoGene:EG10515" /db_xref="GeneID:947508" CDS complement(723630..724202) /gene="kdpC" /locus_tag="b0696" /gene_synonym="ECK0684; JW0684; kac" /EC_number="3.6.3.12" /function="enzyme; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /note="high-affinity potassium transport system" /codon_start=1 /transl_table=11 /product="potassium translocating ATPase, subunit C" /protein_id="NP_415224.1" /db_xref="GI:16128672" /db_xref="ASAP:ABE-0002374" /db_xref="UniProtKB/Swiss-Prot:P03961" /db_xref="ECOCYC:EG10515" /db_xref="EcoGene:EG10515" /db_xref="GeneID:947508" /translation="MSGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIR EGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKLIAARV AALRAANPDASASVPVELVTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIA KYSQQPLVKYIGQPVVNIVELNLALDKLDE" gene complement(724211..726259) /gene="kdpB" /locus_tag="b0697" /gene_synonym="ECK0685; JW0685; kac" /db_xref="ECOCYC:EG10514" /db_xref="EcoGene:EG10514" /db_xref="GeneID:947450" CDS complement(724211..726259) /gene="kdpB" /locus_tag="b0697" /gene_synonym="ECK0685; JW0685; kac" /EC_number="3.6.3.12" /function="enzyme; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /note="ATPase of high-affinity potassium transport system, B chain" /codon_start=1 /transl_table=11 /product="potassium translocating ATPase, subunit B" /protein_id="NP_415225.1" /db_xref="GI:16128673" /db_xref="ASAP:ABE-0002376" /db_xref="UniProtKB/Swiss-Prot:P03960" /db_xref="ECOCYC:EG10514" /db_xref="EcoGene:EG10514" /db_xref="GeneID:947450" /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL LTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKAQANSLKGVKK TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM IRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA EGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK QMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMCLHSPDSAILSAVIFN ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV" gene complement(726282..727955) /gene="kdpA" /locus_tag="b0698" /gene_synonym="ECK0686; JW0686; kac" /db_xref="ECOCYC:EG10513" /db_xref="EcoGene:EG10513" /db_xref="GeneID:946045" CDS complement(726282..727955) /gene="kdpA" /locus_tag="b0698" /gene_synonym="ECK0686; JW0686; kac" /EC_number="3.6.3.12" /function="enzyme; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /note="ATPase of high-affinity potassium transport system, A chain" /codon_start=1 /transl_table=11 /product="potassium translocating ATPase, subunit A" /protein_id="NP_415226.1" /db_xref="GI:16128674" /db_xref="ASAP:ABE-0002381" /db_xref="UniProtKB/Swiss-Prot:P03959" /db_xref="ECOCYC:EG10513" /db_xref="EcoGene:EG10513" /db_xref="GeneID:946045" /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVER VLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSM STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGP VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGD RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSL FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV SKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS" gene complement(727955..728044) /gene="kdpF" /locus_tag="b4513" /gene_synonym="ECK0687; JW0687" /db_xref="ECOCYC:G0-10439" /db_xref="EcoGene:EG12126" /db_xref="GeneID:948946" CDS complement(727955..728044) /gene="kdpF" /locus_tag="b4513" /gene_synonym="ECK0687; JW0687" /GO_component="GO:0031225 - anchored to membrane" /codon_start=1 /transl_table=11 /product="potassium ion accessory transporter subunit" /protein_id="YP_588443.1" /db_xref="GI:94541101" /db_xref="ASAP:ABE-0285034" /db_xref="UniProtKB/Swiss-Prot:P36937" /db_xref="ECOCYC:G0-10439" /db_xref="EcoGene:EG12126" /db_xref="GeneID:948946" /translation="MSAGVITGVLLVFLLLGYLVYALINAEAF" gene 728357..728563 /gene="ybfA" /locus_tag="b0699" /gene_synonym="ECK0688; JW0688" /db_xref="ECOCYC:EG11521" /db_xref="EcoGene:EG11521" /db_xref="GeneID:947452" CDS 728357..728563 /gene="ybfA" /locus_tag="b0699" /gene_synonym="ECK0688; JW0688" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415228.1" /db_xref="GI:16128675" /db_xref="ASAP:ABE-0002386" /db_xref="UniProtKB/Swiss-Prot:P0AAU2" /db_xref="ECOCYC:EG11521" /db_xref="EcoGene:EG11521" /db_xref="GeneID:947452" /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH RVWSKTSDKPVWMDQAEKATGDFY" gene 728806..732999 /gene="rhsC" /locus_tag="b0700" /gene_synonym="ECK0689; JW0689" /db_xref="ECOCYC:EG10848" /db_xref="EcoGene:EG10848" /db_xref="GeneID:945306" CDS 728806..732999 /gene="rhsC" /locus_tag="b0700" /gene_synonym="ECK0689; JW0689" /function="orf; Transposon-related functions" /codon_start=1 /transl_table=11 /product="rhsC element core protein RshC" /protein_id="NP_415229.1" /db_xref="GI:16128676" /db_xref="ASAP:ABE-0002392" /db_xref="UniProtKB/Swiss-Prot:P16918" /db_xref="ECOCYC:EG10848" /db_xref="EcoGene:EG10848" /db_xref="GeneID:945306" /translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVT SGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADI RLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQ ALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGR TQTFHREAAGEFSGEITGVTDGAGRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDT LPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVR SFTYDDKYRGRMVAHRHTGRPEICYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDS LNRREVLHTQGEGGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVT GLITRITTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDITRY RYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQVTAVHRE EGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAGDLTTVIAPDGSRNGTQYDAWGKAI CTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLT GKLIRSEDEGLVTHWHYDEADRLTHRTVNGETAERWQYDERGWLTDISHISEGHRVTV HYGYDSKGRLASEHLTVHHPQTNELLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYG SGWLSGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRD YTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYTTDPAGNRLPDPE LHPDSALSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLY HCDHRGLPLALISTEGTTAWYAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISNIDPLGLETLKCIKPLHSMGGT GERSGPDIWGNPFYHQYLCVPDGKGDYTCGGQDQRGESKGDGLWGPGKASNDTKEAAG RCDLVETDNSCVENCLKGKFKEVRPRYSVLPDIFTPINLGLFKNCQDWSNDSLETCKM KCSGNNIGRFIRFVFTGVM" gene 732999..733325 /gene="ybfB" /locus_tag="b0702" /gene_synonym="ECK0690; JW0691" /db_xref="ECOCYC:EG11522" /db_xref="EcoGene:EG11522" /db_xref="GeneID:947566" CDS 732999..733325 /gene="ybfB" /locus_tag="b0702" /gene_synonym="ECK0690; JW0691" /codon_start=1 /transl_table=11 /product="predicted membrane protein" /protein_id="NP_415230.1" /db_xref="GI:16128677" /db_xref="ASAP:ABE-0002398" /db_xref="UniProtKB/Swiss-Prot:P0AAU5" /db_xref="ECOCYC:EG11522" /db_xref="EcoGene:EG11522" /db_xref="GeneID:947566" /translation="MKYIIFLFRAIWLALSLLILFFSMHRLSLLDSTRDVSELISLMS YGMMVICFPTGIVFFIALIFIGTVSDIIGVRIDSKYIMAIIIWLYFLSGGYIQWFVLS KRIINK" gene 733356..734876 /gene="ybfO" /locus_tag="b0703" /gene_synonym="ECK0691; JW0692" /pseudo /db_xref="EcoGene:EG13661" /db_xref="GeneID:946124" CDS 733356..734876 /gene="ybfO" /locus_tag="b0703" /gene_synonym="ECK0691; JW0692" /note="pseudogene, rhs-like" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002402" /db_xref="UniProtKB/Swiss-Prot:P77779" /db_xref="EcoGene:EG13661" /db_xref="GeneID:946124" gene 734873..735442 /gene="ybfC" /locus_tag="b0704" /gene_synonym="ECK0692; JW0693" /db_xref="ECOCYC:EG11523" /db_xref="EcoGene:EG11523" /db_xref="GeneID:947288" CDS 734873..735442 /gene="ybfC" /locus_tag="b0704" /gene_synonym="ECK0692; JW0693" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415232.1" /db_xref="GI:16128679" /db_xref="ASAP:ABE-0002404" /db_xref="UniProtKB/Swiss-Prot:P28915" /db_xref="ECOCYC:EG11523" /db_xref="EcoGene:EG11523" /db_xref="GeneID:947288" /translation="MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFP VLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGT LQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYA RMTAHLPNKNESYECLIKIQHELIRSEEK" gene 735668..735907 /gene="ybfQ" /locus_tag="b4514" /gene_synonym="ECK4474" /pseudo /db_xref="ECOCYC:G0-10440" /db_xref="EcoGene:EG14419" /db_xref="GeneID:1450245" CDS 735668..735907 /gene="ybfQ" /locus_tag="b4514" /gene_synonym="ECK4474" /note="pseudogene, H repeat-associated protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285035" /db_xref="UniProtKB/Swiss-Prot:Q2EEQ8" /db_xref="ECOCYC:G0-10440" /db_xref="EcoGene:EG14419" /db_xref="GeneID:1450245" gene 736048..737184 /gene="ybfL" /locus_tag="b0705" /gene_synonym="ECK0694; JW0695" /pseudo /db_xref="ECOCYC:G6377" /db_xref="EcoGene:EG13417" /db_xref="GeneID:947075" CDS 736048..737184 /gene="ybfL" /locus_tag="b0705" /gene_synonym="ECK0694; JW0695" /note="predicted transposase (pseudogene);putative factor; Not classified; putative receptor protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002407" /db_xref="UniProtKB/Swiss-Prot:P75741" /db_xref="ECOCYC:G6377" /db_xref="EcoGene:EG13417" /db_xref="GeneID:947075" gene 737315..738076 /gene="ybfD" /locus_tag="b0706" /gene_synonym="ECK0695; JW0696" /db_xref="ECOCYC:EG11524" /db_xref="EcoGene:EG11524" /db_xref="GeneID:945176" CDS 737315..738076 /gene="ybfD" /locus_tag="b0706" /gene_synonym="ECK0695; JW0696" /function="putative enzyme; Not classified" /note="putative DNA ligase" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415234.1" /db_xref="GI:16128681" /db_xref="ASAP:ABE-0002411" /db_xref="UniProtKB/Swiss-Prot:P28916" /db_xref="ECOCYC:EG11524" /db_xref="EcoGene:EG11524" /db_xref="GeneID:945176" /translation="MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGW EDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCICPAKFHESFINWMLDYHSSDD KDVIAIDGKIHRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLN MLDIKGKIIKTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNP KHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE" gene 738224..738733 /gene="ybgA" /locus_tag="b0707" /gene_synonym="ECK0696; JW0697; tkp" /db_xref="ECOCYC:EG11108" /db_xref="EcoGene:EG11108" /db_xref="GeneID:944853" CDS 738224..738733 /gene="ybgA" /locus_tag="b0707" /gene_synonym="ECK0696; JW0697; tkp" /codon_start=1 /transl_table=11 /product="conserved protein, DUF1722 family" /protein_id="NP_415235.1" /db_xref="GI:16128682" /db_xref="ASAP:ABE-0002414" /db_xref="UniProtKB/Swiss-Prot:P24252" /db_xref="ECOCYC:EG11108" /db_xref="EcoGene:EG11108" /db_xref="GeneID:944853" /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF LAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGY FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV INLRHSGVL" gene 738730..740148 /gene="phr" /locus_tag="b0708" /gene_synonym="ECK0697; JW0698; phrB" /db_xref="ECOCYC:EG10736" /db_xref="EcoGene:EG10736" /db_xref="GeneID:947005" CDS 738730..740148 /gene="phr" /locus_tag="b0708" /gene_synonym="ECK0697; JW0698; phrB" /EC_number="4.1.99.3" /function="enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006281 - DNA repair" /note="deoxyribodipyrimidine photolyase (photoreactivation)" /codon_start=1 /transl_table=11 /product="deoxyribodipyrimidine photolyase, FAD-binding" /protein_id="NP_415236.1" /db_xref="GI:16128683" /db_xref="ASAP:ABE-0002417" /db_xref="UniProtKB/Swiss-Prot:P00914" /db_xref="ECOCYC:EG10736" /db_xref="EcoGene:EG10736" /db_xref="GeneID:947005" /translation="MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWAT HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNEL IWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD AAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQKAGVTLDYPQP IVEHKEARVQTLAAYEAARKGK" mat_peptide 738733..740145 /gene="phr" /locus_tag="b0708" /gene_synonym="ECK0697; JW0698; phrB" /product="deoxyribodipyrimidine photolyase, FAD-binding" /experiment="N-terminus verified by Edman degradation: PMID 6325460" repeat_region 740177..740282 /note="RIP66 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(740298..741779) /gene="dtpD" /locus_tag="b0709" /gene_synonym="ECK0698; JW0699; ybgH" /db_xref="ECOCYC:G6378" /db_xref="EcoGene:EG13304" /db_xref="GeneID:947368" CDS complement(740298..741779) /gene="dtpD" /locus_tag="b0709" /gene_synonym="ECK0698; JW0699; ybgH" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009063 - cellular amino acid catabolic process" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="dipeptide and tripeptide permease D" /protein_id="NP_415237.1" /db_xref="GI:16128684" /db_xref="ASAP:ABE-0002420" /db_xref="UniProtKB/Swiss-Prot:P75742" /db_xref="ECOCYC:G6378" /db_xref="EcoGene:EG13304" /db_xref="GeneID:947368" /translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV LLVATPALITILFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES" gene 742050..742793 /gene="ybgI" /locus_tag="b0710" /gene_synonym="ECK0699; JW0700" /db_xref="ECOCYC:G6379" /db_xref="EcoGene:EG13305" /db_xref="GeneID:945824" CDS 742050..742793 /gene="ybgI" /locus_tag="b0710" /gene_synonym="ECK0699; JW0700" /codon_start=1 /transl_table=11 /product="conserved metal-binding protein, NIF3 family" /protein_id="NP_415238.1" /db_xref="GI:16128685" /db_xref="ASAP:ABE-0002424" /db_xref="UniProtKB/Swiss-Prot:P0AFP6" /db_xref="ECOCYC:G6379" /db_xref="EcoGene:EG13305" /db_xref="GeneID:945824" /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT ERGGIRALSEWLNENTDLDVTFIDIPNPA" gene 742816..743472 /gene="ybgJ" /locus_tag="b0711" /gene_synonym="ECK0700; JW0701" /db_xref="ECOCYC:G6380" /db_xref="EcoGene:EG13306" /db_xref="GeneID:945311" CDS 742816..743472 /gene="ybgJ" /locus_tag="b0711" /gene_synonym="ECK0700; JW0701" /function="putative enzyme; Not classified" /note="putative carboxylase" /codon_start=1 /transl_table=11 /product="predicted enzyme subunit" /protein_id="NP_415239.1" /db_xref="GI:16128686" /db_xref="ASAP:ABE-0002426" /db_xref="UniProtKB/Swiss-Prot:P0AAV4" /db_xref="ECOCYC:G6380" /db_xref="EcoGene:EG13306" /db_xref="GeneID:945311" /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV EAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDL AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC" gene 743466..744398 /gene="ybgK" /locus_tag="b0712" /gene_synonym="ECK0701; JW0702" /db_xref="ECOCYC:G6381" /db_xref="EcoGene:EG13307" /db_xref="GeneID:945317" CDS 743466..744398 /gene="ybgK" /locus_tag="b0712" /gene_synonym="ECK0701; JW0702" /function="putative enzyme; Not classified" /note="putative carboxylase" /codon_start=1 /transl_table=11 /product="predicted enzyme subunit" /protein_id="NP_415240.1" /db_xref="GI:16128687" /db_xref="ASAP:ABE-0002428" /db_xref="UniProtKB/Swiss-Prot:P75745" /db_xref="ECOCYC:G6381" /db_xref="EcoGene:EG13307" /db_xref="GeneID:945317" /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKSKRDSM EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQGQILKR TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN" gene 744388..745122 /gene="ybgL" /locus_tag="b0713" /gene_synonym="ECK0702; JW0703" /db_xref="ECOCYC:G6382" /db_xref="EcoGene:EG13308" /db_xref="GeneID:945318" CDS 744388..745122 /gene="ybgL" /locus_tag="b0713" /gene_synonym="ECK0702; JW0703" /function="phenotype; Not classified" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0042493 - response to drug" /note="putative lactam utilization protein" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0271 family" /protein_id="NP_415241.1" /db_xref="GI:16128688" /db_xref="ASAP:ABE-0002431" /db_xref="UniProtKB/Swiss-Prot:P75746" /db_xref="ECOCYC:G6382" /db_xref="EcoGene:EG13308" /db_xref="GeneID:945318" /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQIMQACV REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH VKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEVF ADRGYQADGSLVPRSQSGALIENEEQALAQTLEMVQHGRVKSITGEWATVAAQTVCLH GDGEHALAFARRLRSAFAEKGIVVAA" gene 745158..745949 /gene="nei" /locus_tag="b0714" /gene_synonym="ECK0703; JW0704" /db_xref="ECOCYC:G6383" /db_xref="EcoGene:EG13237" /db_xref="GeneID:945320" CDS 745158..745949 /gene="nei" /locus_tag="b0714" /gene_synonym="ECK0703; JW0704" /EC_number="3.2.-.-" /function="enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006281 - DNA repair" /note="endonuclease VIII and DNA N-glycosylase with an AP lyase activity" /codon_start=1 /transl_table=11 /product="endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase" /protein_id="NP_415242.1" /db_xref="GI:16128689" /db_xref="ASAP:ABE-0002433" /db_xref="UniProtKB/Swiss-Prot:P50465" /db_xref="ECOCYC:G6383" /db_xref="EcoGene:EG13237" /db_xref="GeneID:945320" /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKPYQSQLIGQH VTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL LYSASDIEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE NKHHGALFRFKVFHRDGEPCERCGSIIEKTTLSSRPFYWCPGCQH" mat_peptide 745161..745946 /gene="nei" /locus_tag="b0714" /gene_synonym="ECK0703; JW0704" /product="endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase" /experiment="N-terminus verified by Edman degradation: PMID 9171429" gene complement(745946..746992) /gene="abrB" /locus_tag="b0715" /gene_synonym="ECK0704; JW5097; ybgN" /db_xref="ECOCYC:G6384" /db_xref="EcoGene:EG13310" /db_xref="GeneID:945321" CDS complement(745946..746992) /gene="abrB" /locus_tag="b0715" /gene_synonym="ECK0704; JW5097; ybgN" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="regulator of aidB expression; inner membrane protein" /protein_id="NP_415243.4" /db_xref="GI:90111163" /db_xref="ASAP:ABE-0002435" /db_xref="UniProtKB/Swiss-Prot:P75747" /db_xref="ECOCYC:G6384" /db_xref="EcoGene:EG13310" /db_xref="GeneID:945321" /translation="MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLL VRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM MLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM AWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA IARFISTYAPKRSA" gene complement(747144..748205) /gene="ybgO" /locus_tag="b0716" /gene_synonym="ECK0705; JW5098" /db_xref="ECOCYC:G6385" /db_xref="EcoGene:EG13311" /db_xref="GeneID:947550" CDS complement(747144..748205) /gene="ybgO" /locus_tag="b0716" /gene_synonym="ECK0705; JW5098" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415244.4" /db_xref="GI:90111164" /db_xref="ASAP:ABE-0002441" /db_xref="UniProtKB/Swiss-Prot:P75748" /db_xref="ECOCYC:G6385" /db_xref="EcoGene:EG13311" /db_xref="GeneID:947550" /translation="MSAGKGLLLVICLLFLPLKSAMALNCYFGTSGGAVEKSEAIQPF AVPGNAKPGDKIWESDDIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTY NGVDYDASLGKSRIDTNQCIDSKNIDIYTPEQIIAMGWQNKICSGDPANIHMSRTFLA RMRLYVKIREMPPHDYQSTLSDYIVVQFDGAGSVNEDPTAQNLKYHITGLENIRVLDC SVNFSISPETQVIDFGKFNLLDIRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEE TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLVYEKTYTAELSSIPG TPIEAGPFDTVVLFKINYN" gene complement(748202..748930) /gene="ybgP" /locus_tag="b0717" /gene_synonym="ECK0706; JW0707" /db_xref="ECOCYC:G6386" /db_xref="EcoGene:EG13312" /db_xref="GeneID:945110" CDS complement(748202..748930) /gene="ybgP" /locus_tag="b0717" /gene_synonym="ECK0706; JW0707" /function="putative factor; Not classified" /GO_process="GO:0006457 - protein folding" /note="putative chaperone" /codon_start=1 /transl_table=11 /product="predicted periplasmic pilus chaperone" /protein_id="NP_415245.1" /db_xref="GI:16128692" /db_xref="ASAP:ABE-0002443" /db_xref="UniProtKB/Swiss-Prot:P75749" /db_xref="ECOCYC:G6386" /db_xref="EcoGene:EG13312" /db_xref="GeneID:945110" /translation="MTFIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIEN QSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRE TLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQG NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMD DYGALRMTTLNCSGQCRLQAVEAK" gene complement(748945..751392) /gene="ybgQ" /locus_tag="b0718" /gene_synonym="ECK0707; JW5099" /db_xref="ECOCYC:G6387" /db_xref="EcoGene:EG13313" /db_xref="GeneID:946537" CDS complement(748945..751392) /gene="ybgQ" /locus_tag="b0718" /gene_synonym="ECK0707; JW5099" /function="putative membrane; Not classified" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative outer membrane protein" /codon_start=1 /transl_table=11 /product="predicted outer membrane protein" /protein_id="NP_415246.2" /db_xref="GI:90111165" /db_xref="ASAP:ABE-0002446" /db_xref="UniProtKB/Swiss-Prot:P75750" /db_xref="ECOCYC:G6387" /db_xref="EcoGene:EG13313" /db_xref="GeneID:946537" /translation="MNIYRLSFVSCLVMAMPCAMAVEFNLNVLDKSMRDRIDISLLKE KGVIAPGEYFVSVAVNNNKISNGQKINWQKKGDKTIPCINDSLVDKFGLKPDIRQSLP QIDRCIDFSSRPEMLFNFDQANQQLNISIPQAWLAWHSENWAPPSTWKEGVAGVLMDY NLFASSYRPQDGSSSTNLNAYGTAGINAGAWRLRSDYQLNKTDSEDNHDQSGGISRTY LFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQT NATVTISQSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAASTP FLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSNTSLYGGLLISDDDYHS AAMGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQVDATNSTISLAAYR FSDRHFHSYANYLDHKYNDSDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWNADA STTANITAGFNVDIGDWRDISISTSFNTTHYEDKDRDNQIYLSISLPFGNGGRVGYDM QNSSHSTIHRMSWNDTLDERNSWGMSAGLQSDRPDNGAQVSGNYQHLSSAGEWDISGT YAASDYSSVSSSWSGSFTATQYGAAFHRRSSTNEPRLMVSTDGVADIPVQGNLDYTNH FGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVIKETWIEGAIGYKSLASRSGKDVN VIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWLSGVAENQLFTVVWGEQSCIIH LPERLEDTTKRLILPCH" gene complement(751452..752018) /gene="ybgD" /locus_tag="b0719" /gene_synonym="ECK0708; JW0709" /db_xref="ECOCYC:EG12359" /db_xref="EcoGene:EG12359" /db_xref="GeneID:945325" CDS complement(751452..752018) /gene="ybgD" /locus_tag="b0719" /gene_synonym="ECK0708; JW0709" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415247.1" /db_xref="GI:16128694" /db_xref="ASAP:ABE-0002448" /db_xref="UniProtKB/Swiss-Prot:P37909" /db_xref="ECOCYC:EG12359" /db_xref="EcoGene:EG12359" /db_xref="GeneID:945325" /translation="MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEI HPEDIDKNIDLGQVTTTHINREHHSNKVAVDIRLINCDLPASDNGSGMPVSKVGVTFD STAKTTGATPLLSNTSAGEATGVGVRLMDKNDGNIVLGSAAPDLDLDASSSEQTLNFF AWMEQIDNAVDVTAGEVTANATYVLDYK" gene complement(752408..753691) /gene="gltA" /locus_tag="b0720" /gene_synonym="ECK0709; gluT; icdB; JW0710" /db_xref="ECOCYC:EG10402" /db_xref="EcoGene:EG10402" /db_xref="GeneID:945323" CDS complement(752408..753691) /gene="gltA" /locus_tag="b0720" /gene_synonym="ECK0709; gluT; icdB; JW0710" /EC_number="2.3.3.1" /function="enzyme; Energy metabolism, carbon: TCA cycle" /GO_process="GO:0009061 - anaerobic respiration; GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="citrate synthase" /protein_id="NP_415248.1" /db_xref="GI:16128695" /db_xref="ASAP:ABE-0002451" /db_xref="UniProtKB/Swiss-Prot:P0ABH7" /db_xref="ECOCYC:EG10402" /db_xref="EcoGene:EG10402" /db_xref="GeneID:945323" /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR" mat_peptide complement(752411..753688) /gene="gltA" /locus_tag="b0720" /gene_synonym="ECK0709; gluT; icdB; JW0710" /product="citrate synthase" /experiment="N-terminus verified by Edman degradation: PMID 6380576,9732527" gene 754400..754789 /gene="sdhC" /locus_tag="b0721" /gene_synonym="cybA; ECK0710; JW0711" /db_xref="ECOCYC:EG10933" /db_xref="EcoGene:EG10933" /db_xref="GeneID:945316" CDS 754400..754789 /gene="sdhC" /locus_tag="b0721" /gene_synonym="cybA; ECK0710; JW0711" /function="enzyme; Energy metabolism, carbon: TCA cycle" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration; GO:0017004 - cytochrome complex assembly; GO:0006099 - tricarboxylic acid cycle" /note="succinate dehydrogenase, cytochrome b556" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, membrane subunit, binds cytochrome b556" /protein_id="NP_415249.1" /db_xref="GI:16128696" /db_xref="ASAP:ABE-0002460" /db_xref="UniProtKB/Swiss-Prot:P69054" /db_xref="ECOCYC:EG10933" /db_xref="EcoGene:EG10933" /db_xref="GeneID:945316" /translation="MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGIL LWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEET FEAGKRSAKISFVITVVLSLLAGVLVW" gene 754783..755130 /gene="sdhD" /locus_tag="b0722" /gene_synonym="ECK0711; JW0712" /db_xref="ECOCYC:EG10934" /db_xref="EcoGene:EG10934" /db_xref="GeneID:945322" CDS 754783..755130 /gene="sdhD" /locus_tag="b0722" /gene_synonym="ECK0711; JW0712" /function="enzyme; Energy metabolism, carbon: TCA cycle" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration; GO:0006099 - tricarboxylic acid cycle" /note="succinate dehydrogenase, hydrophobic subunit" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, membrane subunit, binds cytochrome b556" /protein_id="NP_415250.1" /db_xref="GI:16128697" /db_xref="ASAP:ABE-0002464" /db_xref="UniProtKB/Swiss-Prot:P0AC44" /db_xref="ECOCYC:EG10934" /db_xref="EcoGene:EG10934" /db_xref="GeneID:945322" /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV VYVIYGFVVVWGV" gene 755130..756896 /gene="sdhA" /locus_tag="b0723" /gene_synonym="ECK0712; JW0713" /db_xref="ECOCYC:EG10931" /db_xref="EcoGene:EG10931" /db_xref="GeneID:945402" CDS 755130..756896 /gene="sdhA" /locus_tag="b0723" /gene_synonym="ECK0712; JW0713" /EC_number="1.3.99.1" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009060 - aerobic respiration; GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, flavoprotein subunit" /protein_id="NP_415251.1" /db_xref="GI:16128698" /db_xref="ASAP:ABE-0002466" /db_xref="UniProtKB/Swiss-Prot:P0AC41" /db_xref="ECOCYC:EG10931" /db_xref="EcoGene:EG10931" /db_xref="GeneID:945402" /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM TRRSVNMEPKLRPAFPPKIRTY" gene 756912..757628 /gene="sdhB" /locus_tag="b0724" /gene_synonym="ECK0713; JW0714" /db_xref="ECOCYC:EG10932" /db_xref="EcoGene:EG10932" /db_xref="GeneID:945300" CDS 756912..757628 /gene="sdhB" /locus_tag="b0724" /gene_synonym="ECK0713; JW0714" /EC_number="1.3.99.1" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009060 - aerobic respiration; GO:0006099 - tricarboxylic acid cycle" /note="succinate dehydrogenase, iron sulfur protein" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, FeS subunit" /protein_id="NP_415252.1" /db_xref="GI:16128699" /db_xref="ASAP:ABE-0002468" /db_xref="UniProtKB/Swiss-Prot:P07014" /db_xref="ECOCYC:EG10932" /db_xref="EcoGene:EG10932" /db_xref="GeneID:945300" /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKE KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK GLNPTRAIGHIKSMLLQRNA" repeat_region 757632..757749 /note="RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site" gene 757929..760730 /gene="sucA" /locus_tag="b0726" /gene_synonym="ECK0714; JW0715; lys" /db_xref="ECOCYC:EG10979" /db_xref="EcoGene:EG10979" /db_xref="GeneID:945303" CDS 757929..760730 /gene="sucA" /locus_tag="b0726" /gene_synonym="ECK0714; JW0715; lys" /EC_number="1.2.4.2" /function="enzyme; Energy metabolism, carbon: TCA cycle" /GO_process="GO:0006099 - tricarboxylic acid cycle" /note="2-oxoglutarate dehydrogenase (decarboxylase component)" /codon_start=1 /transl_table=11 /product="2-oxoglutarate decarboxylase, thiamin-requiring" /protein_id="NP_415254.1" /db_xref="GI:16128701" /db_xref="ASAP:ABE-0002478" /db_xref="UniProtKB/Swiss-Prot:P0AFG3" /db_xref="ECOCYC:EG10979" /db_xref="EcoGene:EG10979" /db_xref="GeneID:945303" /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY MSVHQKQQQDLVNDALNVE" gene 760745..761962 /gene="sucB" /locus_tag="b0727" /gene_synonym="ECK0715; JW0716" /db_xref="ECOCYC:EG10980" /db_xref="EcoGene:EG10980" /db_xref="GeneID:945307" CDS 760745..761962 /gene="sucB" /locus_tag="b0727" /gene_synonym="ECK0715; JW0716" /EC_number="2.3.1.61" /function="enzyme; Energy metabolism, carbon: TCA cycle" /GO_process="GO:0006099 - tricarboxylic acid cycle" /note="2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component)" /codon_start=1 /transl_table=11 /product="dihydrolipoyltranssuccinase" /protein_id="NP_415255.1" /db_xref="GI:16128702" /db_xref="ASAP:ABE-0002480" /db_xref="UniProtKB/Swiss-Prot:P0AFG6" /db_xref="ECOCYC:EG10980" /db_xref="EcoGene:EG10980" /db_xref="GeneID:945307" /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAP AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK ELLEDPTRLLLDV" mat_peptide 760748..761959 /gene="sucB" /locus_tag="b0727" /gene_synonym="ECK0715; JW0716" /product="dihydrolipoyltranssuccinase" /experiment="N-terminus verified by Edman degradation: PMID 9298646" repeat_region 761985..762151 /note="REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene 762237..763403 /gene="sucC" /locus_tag="b0728" /gene_synonym="ECK0716; JW0717" /db_xref="ECOCYC:EG10981" /db_xref="EcoGene:EG10981" /db_xref="GeneID:945312" CDS 762237..763403 /gene="sucC" /locus_tag="b0728" /gene_synonym="ECK0716; JW0717" /EC_number="6.2.1.5" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /GO_process="GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase, beta subunit" /protein_id="NP_415256.1" /db_xref="GI:16128703" /db_xref="ASAP:ABE-0002483" /db_xref="UniProtKB/Swiss-Prot:P0A836" /db_xref="ECOCYC:EG10981" /db_xref="EcoGene:EG10981" /db_xref="GeneID:945312" /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA DGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIG AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK" gene 763403..764272 /gene="sucD" /locus_tag="b0729" /gene_synonym="ECK0717; JW0718" /db_xref="ECOCYC:EG10982" /db_xref="EcoGene:EG10982" /db_xref="GeneID:945314" CDS 763403..764272 /gene="sucD" /locus_tag="b0729" /gene_synonym="ECK0717; JW0718" /EC_number="6.2.1.5" /function="enzyme; Energy metabolism, carbon: TCA cycle" /GO_process="GO:0006099 - tricarboxylic acid cycle" /note="succinyl-CoA synthetase, alpha subunit" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase, NAD(P)-binding, alpha subunit" /protein_id="NP_415257.1" /db_xref="GI:16128704" /db_xref="ASAP:ABE-0002485" /db_xref="UniProtKB/Swiss-Prot:P0AGE9" /db_xref="ECOCYC:EG10982" /db_xref="EcoGene:EG10982" /db_xref="GeneID:945314" /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS LADIGEALKTVLK" mat_peptide 763406..764269 /gene="sucD" /locus_tag="b0729" /gene_synonym="ECK0717; JW0718" /product="succinyl-CoA synthetase, NAD(P)-binding, alpha subunit" /experiment="N-terminus verified by Edman degradation: PMID 7783627,9298646" gene complement(764376..765098) /gene="mngR" /locus_tag="b0730" /gene_synonym="ECK0718; farR; JW0719; ybgB" /db_xref="ECOCYC:EG11109" /db_xref="EcoGene:EG11109" /db_xref="GeneID:945371" CDS complement(764376..765098) /gene="mngR" /locus_tag="b0730" /gene_synonym="ECK0718; farR; JW0719; ybgB" /function="regulator; Energy metabolism, carbon: TCA cycle" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent; GO:0006350 - transcription; GO:0006099 - tricarboxylic acid cycle" /note="transcriptional regulator of succinylCoA synthetase operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator, fatty-acyl-binding" /protein_id="NP_415258.1" /db_xref="GI:16128705" /db_xref="ASAP:ABE-0002487" /db_xref="UniProtKB/Swiss-Prot:P13669" /db_xref="ECOCYC:EG11109" /db_xref="EcoGene:EG11109" /db_xref="GeneID:945371" /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF EVIPADDFLQQQLQITPQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY SRNAFNTDDYKFTLIAQRKSSR" gene 765207..767183 /gene="mngA" /locus_tag="b0731" /gene_synonym="ECK0719; hrsA; JW0720" /db_xref="ECOCYC:EG13235" /db_xref="EcoGene:EG13235" /db_xref="GeneID:945355" CDS 765207..767183 /gene="mngA" /locus_tag="b0731" /gene_synonym="ECK0719; hrsA; JW0720" /EC_number="2.7.1.69" /function="enzyme; Proteins - translation and modification" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0006464 - protein modification process; GO:0009266 - response to temperature stimulus" /note="protein modification enzyme, induction of ompC" /codon_start=1 /transl_table=11 /product="fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component" /protein_id="NP_415259.1" /db_xref="GI:16128706" /db_xref="ASAP:ABE-0002493" /db_xref="UniProtKB/Swiss-Prot:P54745" /db_xref="ECOCYC:EG13235" /db_xref="EcoGene:EG13235" /db_xref="GeneID:945355" /translation="MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALCLNARFTSREEA IHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVAT LSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATT PDELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVY VEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEAL IQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLL SQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGL AANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLML FVVGEPVAWINNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMA NGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPM AIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWF GAALVGAAISTAILLMWRRHAVKHGNYLTDGVMP" gene 767201..769834 /gene="mngB" /locus_tag="b0732" /gene_synonym="ECK0720; JW0721" /db_xref="ECOCYC:EG13236" /db_xref="EcoGene:EG13236" /db_xref="GeneID:945359" CDS 767201..769834 /gene="mngB" /locus_tag="b0732" /gene_synonym="ECK0720; JW0721" /function="putative enzyme; Not classified" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="putative sugar hydrolase" /codon_start=1 /transl_table=11 /product="alpha-mannosidase" /protein_id="NP_415260.1" /db_xref="GI:16128707" /db_xref="ASAP:ABE-0002495" /db_xref="UniProtKB/Swiss-Prot:P54746" /db_xref="ECOCYC:EG13236" /db_xref="EcoGene:EG13236" /db_xref="GeneID:945359" /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIV RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDK TEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLP NGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGK YMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILK NHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNL MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLV DKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVIR YDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPTP FNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVF SEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSC RLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPP VGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQ GSNLSGPFLPGQSRTFSYRLA" repeat_region 769898..769996 /note="RIP69 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 770681..772249 /gene="cydA" /locus_tag="b0733" /gene_synonym="ECK0721; JW0722" /db_xref="ECOCYC:EG10173" /db_xref="EcoGene:EG10173" /db_xref="GeneID:945341" CDS 770681..772249 /gene="cydA" /locus_tag="b0733" /gene_synonym="ECK0721; JW0722" /EC_number="1.9.3.-" /function="enzyme; Energy metabolism, carbon: Electron transport" /experiment="N-terminus verified by Edman degradation: PMID 10428033" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="cytochrome d terminal oxidase, polypeptide subunit I" /codon_start=1 /transl_table=11 /product="cytochrome d terminal oxidase, subunit I" /protein_id="NP_415261.2" /db_xref="GI:90111166" /db_xref="ASAP:ABE-0002499" /db_xref="UniProtKB/Swiss-Prot:P0ABJ9" /db_xref="ECOCYC:EG10173" /db_xref="EcoGene:EG10173" /db_xref="GeneID:945341" /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR YHFEQSSTTTQPAR" gene 772265..773404 /gene="cydB" /locus_tag="b0734" /gene_synonym="ECK0722; JW0723" /db_xref="ECOCYC:EG10174" /db_xref="EcoGene:EG10174" /db_xref="GeneID:945347" CDS 772265..773404 /gene="cydB" /locus_tag="b0734" /gene_synonym="ECK0722; JW0723" /EC_number="1.9.3.-" /function="enzyme; Energy metabolism, carbon: Electron transport" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="cytochrome d terminal oxidase polypeptide subunit II" /codon_start=1 /transl_table=11 /product="cytochrome d terminal oxidase, subunit II" /protein_id="NP_415262.1" /db_xref="GI:16128709" /db_xref="ASAP:ABE-0002501" /db_xref="UniProtKB/Swiss-Prot:P0ABK2" /db_xref="ECOCYC:EG10174" /db_xref="EcoGene:EG10174" /db_xref="GeneID:945347" /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY" gene 773419..773532 /gene="ybgT" /locus_tag="b4515" /gene_synonym="ECK0723; JW0724" /db_xref="ECOCYC:G0-10441" /db_xref="EcoGene:EG14329" /db_xref="GeneID:1450246" CDS 773419..773532 /gene="ybgT" /locus_tag="b4515" /gene_synonym="ECK0723; JW0724" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="YP_588444.1" /db_xref="GI:94541102" /db_xref="ASAP:ABE-0285036" /db_xref="UniProtKB/Swiss-Prot:P56100" /db_xref="ECOCYC:G0-10441" /db_xref="EcoGene:EG14329" /db_xref="GeneID:1450246" /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI" gene 773532..773825 /gene="ybgE" /locus_tag="b0735" /gene_synonym="ECK0724; JW0725" /db_xref="ECOCYC:EG12395" /db_xref="EcoGene:EG12395" /db_xref="GeneID:945326" CDS 773532..773825 /gene="ybgE" /locus_tag="b0735" /gene_synonym="ECK0724; JW0725" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415263.1" /db_xref="GI:16128710" /db_xref="ASAP:ABE-0002505" /db_xref="UniProtKB/Swiss-Prot:P0AAV0" /db_xref="ECOCYC:EG12395" /db_xref="EcoGene:EG12395" /db_xref="GeneID:945326" /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF" gene 773975..774379 /gene="ybgC" /locus_tag="b0736" /gene_synonym="ECK0725; JW0726" /db_xref="ECOCYC:EG11110" /db_xref="EcoGene:EG11110" /db_xref="GeneID:948907" CDS 773975..774379 /gene="ybgC" /locus_tag="b0736" /gene_synonym="ECK0725; JW0726" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase, involved in phospholipid metabolism" /protein_id="NP_415264.1" /db_xref="GI:16128711" /db_xref="ASAP:ABE-0002508" /db_xref="UniProtKB/Swiss-Prot:P0A8Z3" /db_xref="ECOCYC:EG11110" /db_xref="EcoGene:EG11110" /db_xref="GeneID:948907" /translation="MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ" gene 774376..775068 /gene="tolQ" /locus_tag="b0737" /gene_synonym="ECK0726; fii; JW0727; tolP" /db_xref="ECOCYC:EG11010" /db_xref="EcoGene:EG11010" /db_xref="GeneID:948900" CDS 774376..775068 /gene="tolQ" /locus_tag="b0737" /gene_synonym="ECK0726; fii; JW0727; tolP" /function="membrane; Colicin-related functions" /experiment="N-terminus verified by Edman degradation: PMID 8300535" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins" /codon_start=1 /transl_table=11 /product="membrane spanning protein in TolA-TolQ-TolR complex" /protein_id="NP_415265.1" /db_xref="GI:16128712" /db_xref="ASAP:ABE-0002511" /db_xref="UniProtKB/Swiss-Prot:P0ABU9" /db_xref="ECOCYC:EG11010" /db_xref="EcoGene:EG11010" /db_xref="GeneID:948900" /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH RQAFTVSESNKG" gene 775072..775500 /gene="tolR" /locus_tag="b0738" /gene_synonym="ECK0727; JW0728" /db_xref="ECOCYC:EG11011" /db_xref="EcoGene:EG11011" /db_xref="GeneID:945328" CDS 775072..775500 /gene="tolR" /locus_tag="b0738" /gene_synonym="ECK0727; JW0728" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative inner membrane protein, involved in the tonB-independent uptake of group A colicins" /codon_start=1 /transl_table=11 /product="membrane spanning protein in TolA-TolQ-TolR complex" /protein_id="NP_415266.1" /db_xref="GI:16128713" /db_xref="ASAP:ABE-0002513" /db_xref="UniProtKB/Swiss-Prot:P0ABV6" /db_xref="ECOCYC:EG11011" /db_xref="EcoGene:EG11011" /db_xref="GeneID:945328" /translation="MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVE VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI" gene 775565..776830 /gene="tolA" /locus_tag="b0739" /gene_synonym="cim; ECK0728; excC; JW0729; lky" /db_xref="ECOCYC:EG11007" /db_xref="EcoGene:EG11007" /db_xref="GeneID:946625" CDS 775565..776830 /gene="tolA" /locus_tag="b0739" /gene_synonym="cim; ECK0728; excC; JW0729; lky" /function="membrane; Colicin-related functions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="membrane spanning protein, required for outer membrane integrity" /codon_start=1 /transl_table=11 /product="membrane anchored protein in TolA-TolQ-TolR complex" /protein_id="NP_415267.1" /db_xref="GI:16128714" /db_xref="ASAP:ABE-0002515" /db_xref="UniProtKB/Swiss-Prot:P19934" /db_xref="ECOCYC:EG11007" /db_xref="EcoGene:EG11007" /db_xref="GeneID:946625" /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA KKAAADAKKKAEAEAAKAAAEAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEK AKAEAEKKAAAEKAAADKKAAAEKAAADKKAAEKAAAEKAAADKKAAAEKAAADKKAA AAKAAAEKAAAAKAAAEADDIFGELSSGKNAPKTGGGAKGNNASPAGSGNTKNNGASG ADINNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPEGGDPALCQAAL AAAKLAKIPKPPSQAVYEVFKNAPLDFKP" gene 776963..778255 /gene="tolB" /locus_tag="b0740" /gene_synonym="ECK0729; JW5100" /db_xref="ECOCYC:EG11008" /db_xref="EcoGene:EG11008" /db_xref="GeneID:945429" CDS 776963..778255 /gene="tolB" /locus_tag="b0740" /gene_synonym="ECK0729; JW5100" /function="factor; Colicin-related functions" /GO_component="GO:0042597 - periplasmic space" /note="periplasmic protein involved in the tonb-independent uptake of group A colicins" /codon_start=1 /transl_table=11 /product="periplasmic protein" /protein_id="NP_415268.1" /db_xref="GI:16128715" /db_xref="ASAP:ABE-0002517" /db_xref="UniProtKB/Swiss-Prot:P0A855" /db_xref="ECOCYC:EG11008" /db_xref="EcoGene:EG11008" /db_xref="GeneID:945429" /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVG QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQN QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL" mat_peptide 777026..778252 /gene="tolB" /locus_tag="b0740" /gene_synonym="ECK0729; JW5100" /product="periplasmic protein" /experiment="N-terminus verified by Edman degradation: PMID 7929011,9740056" gene 778290..778811 /gene="pal" /locus_tag="b0741" /gene_synonym="ECK0730; excC; JW0731" /db_xref="ECOCYC:EG10684" /db_xref="EcoGene:EG10684" /db_xref="GeneID:945004" CDS 778290..778811 /gene="pal" /locus_tag="b0741" /gene_synonym="ECK0730; excC; JW0731" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="peptidoglycan-associated lipoprotein" /codon_start=1 /transl_table=11 /product="peptidoglycan-associated outer membrane lipoprotein" /protein_id="NP_415269.1" /db_xref="GI:16128716" /db_xref="ASAP:ABE-0002521" /db_xref="UniProtKB/Swiss-Prot:P0A912" /db_xref="ECOCYC:EG10684" /db_xref="EcoGene:EG10684" /db_xref="GeneID:945004" /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE AAYSKNRRAVLVY" gene 778821..779612 /gene="ybgF" /locus_tag="b0742" /gene_synonym="ECK0731; JW0732" /db_xref="ECOCYC:EG12854" /db_xref="EcoGene:EG12854" /db_xref="GeneID:947227" CDS 778821..779612 /gene="ybgF" /locus_tag="b0742" /gene_synonym="ECK0731; JW0732" /GO_component="GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="periplasmic TolA-binding protein" /protein_id="NP_415270.1" /db_xref="GI:16128717" /db_xref="ASAP:ABE-0002523" /db_xref="UniProtKB/Swiss-Prot:P45955" /db_xref="ECOCYC:EG12854" /db_xref="EcoGene:EG12854" /db_xref="GeneID:947227" /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS SGGAAAQSTSGDQSGAAASTTPTADAGTANAGAPVKSGNANTDYNAAIALVQDKSRQD DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM" gene 779777..779852 /gene="lysT" /locus_tag="b0743" /gene_synonym="ECK0732; JWR0018; lysTalpha; sua; supG; supL" /db_xref="ECOCYC:EG30055" /db_xref="EcoGene:EG30055" /db_xref="GeneID:945336" tRNA 779777..779852 /gene="lysT" /locus_tag="b0743" /gene_synonym="ECK0732; JWR0018; lysTalpha; sua; supG; supL" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002525" /db_xref="ECOCYC:EG30055" /db_xref="EcoGene:EG30055" /db_xref="GeneID:945336" gene 779988..780063 /gene="valT" /locus_tag="b0744" /gene_synonym="ECK0733; JWR0019" /db_xref="ECOCYC:EG30109" /db_xref="EcoGene:EG30109" /db_xref="GeneID:945331" tRNA 779988..780063 /gene="valT" /locus_tag="b0744" /gene_synonym="ECK0733; JWR0019" /product="tRNA-Val" /note="anticodon: UAC" /db_xref="ASAP:ABE-0002527" /db_xref="ECOCYC:EG30109" /db_xref="EcoGene:EG30109" /db_xref="GeneID:945331" gene 780066..780141 /gene="lysW" /locus_tag="b0745" /gene_synonym="ECK0734; JWR0020; lysTbeta; su" /db_xref="ECOCYC:EG30057" /db_xref="EcoGene:EG30057" /db_xref="GeneID:945338" tRNA 780066..780141 /gene="lysW" /locus_tag="b0745" /gene_synonym="ECK0734; JWR0020; lysTbeta; su" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002529" /db_xref="ECOCYC:EG30057" /db_xref="EcoGene:EG30057" /db_xref="GeneID:945338" gene 780291..780366 /gene="valZ" /locus_tag="b0746" /gene_synonym="ECK0735; JWR0021" /db_xref="ECOCYC:G6389" /db_xref="EcoGene:EG31125" /db_xref="GeneID:945345" tRNA 780291..780366 /gene="valZ" /locus_tag="b0746" /gene_synonym="ECK0735; JWR0021" /product="tRNA-Val" /note="anticodon: UAC" /db_xref="ASAP:ABE-0002531" /db_xref="ECOCYC:G6389" /db_xref="EcoGene:EG31125" /db_xref="GeneID:945345" gene 780370..780445 /gene="lysY" /locus_tag="b0747" /gene_synonym="ECK0736; JWR0022" /db_xref="ECOCYC:G6390" /db_xref="EcoGene:EG31123" /db_xref="GeneID:945342" tRNA 780370..780445 /gene="lysY" /locus_tag="b0747" /gene_synonym="ECK0736; JWR0022" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002533" /db_xref="ECOCYC:G6390" /db_xref="EcoGene:EG31123" /db_xref="GeneID:945342" gene 780592..780667 /gene="lysZ" /locus_tag="b0748" /gene_synonym="ECK0737; JWR0023" /db_xref="ECOCYC:G6391" /db_xref="EcoGene:EG31124" /db_xref="GeneID:945352" tRNA 780592..780667 /gene="lysZ" /locus_tag="b0748" /gene_synonym="ECK0737; JWR0023" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002535" /db_xref="ECOCYC:G6391" /db_xref="EcoGene:EG31124" /db_xref="GeneID:945352" gene 780800..780875 /gene="lysQ" /locus_tag="b0749" /gene_synonym="ECK0738; JWR0024" /db_xref="ECOCYC:G6392" /db_xref="EcoGene:EG31122" /db_xref="GeneID:945353" tRNA 780800..780875 /gene="lysQ" /locus_tag="b0749" /gene_synonym="ECK0738; JWR0024" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002537" /db_xref="ECOCYC:G6392" /db_xref="EcoGene:EG31122" /db_xref="GeneID:945353" gene 781308..782351 /gene="nadA" /locus_tag="b0750" /gene_synonym="ECK0739; JW0733; nicA" /db_xref="ECOCYC:EG10630" /db_xref="EcoGene:EG10630" /db_xref="GeneID:945351" CDS 781308..782351 /gene="nadA" /locus_tag="b0750" /gene_synonym="ECK0739; JW0733; nicA" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009435 - NAD biosynthetic process" /note="quinolinate synthetase, A protein" /codon_start=1 /transl_table=11 /product="quinolinate synthase, subunit A" /protein_id="NP_415271.1" /db_xref="GI:16128718" /db_xref="ASAP:ABE-0002541" /db_xref="UniProtKB/Swiss-Prot:P11458" /db_xref="ECOCYC:EG10630" /db_xref="EcoGene:EG10630" /db_xref="GeneID:945351" /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD KELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVP LNRMLDFAATLRG" gene 782389..783108 /gene="pnuC" /locus_tag="b0751" /gene_synonym="ECK0740; JW0734" /db_xref="ECOCYC:EG11700" /db_xref="EcoGene:EG11700" /db_xref="GeneID:945350" CDS 782389..783108 /gene="pnuC" /locus_tag="b0751" /gene_synonym="ECK0740; JW0734" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /note="required for NMN transport" /codon_start=1 /transl_table=11 /product="nicotinamide mononucleotide transporter" /protein_id="NP_415272.1" /db_xref="GI:16128719" /db_xref="ASAP:ABE-0002547" /db_xref="UniProtKB/Swiss-Prot:P0AFK2" /db_xref="ECOCYC:EG11700" /db_xref="EcoGene:EG11700" /db_xref="GeneID:945350" /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP FWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA LNGSRMWINSARERGSRALSH" gene complement(783105..784046) /gene="zitB" /locus_tag="b0752" /gene_synonym="ECK0741; JW0735; ybgR" /db_xref="ECOCYC:G6393" /db_xref="EcoGene:EG13662" /db_xref="GeneID:945348" CDS complement(783105..784046) /gene="zitB" /locus_tag="b0752" /gene_synonym="ECK0741; JW0735; ybgR" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport system permease protein" /codon_start=1 /transl_table=11 /product="zinc efflux system" /protein_id="NP_415273.1" /db_xref="GI:16128720" /db_xref="ASAP:ABE-0002549" /db_xref="UniProtKB/Swiss-Prot:P75757" /db_xref="ECOCYC:G6393" /db_xref="EcoGene:EG13662" /db_xref="GeneID:945348" /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV LGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPV SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYL MDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH" gene complement(784160..784540) /gene="ybgS" /locus_tag="b0753" /gene_synonym="ECK0742; JW0736" /db_xref="ECOCYC:G6394" /db_xref="EcoGene:EG13663" /db_xref="GeneID:945356" CDS complement(784160..784540) /gene="ybgS" /locus_tag="b0753" /gene_synonym="ECK0742; JW0736" /function="putative regulator; Not classified" /note="putative homeobox protein" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415274.1" /db_xref="GI:16128721" /db_xref="ASAP:ABE-0002553" /db_xref="UniProtKB/Swiss-Prot:P0AAV6" /db_xref="ECOCYC:G6394" /db_xref="EcoGene:EG13663" /db_xref="GeneID:945356" /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQ VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD INKKVQTGDGINNDVDTKTDGTTQ" gene 784856..785908 /gene="aroG" /locus_tag="b0754" /gene_synonym="ECK0743; JW0737" /db_xref="ECOCYC:EG10079" /db_xref="EcoGene:EG10079" /db_xref="GeneID:945605" CDS 784856..785908 /gene="aroG" /locus_tag="b0754" /gene_synonym="ECK0743; JW0737" /EC_number="2.5.1.54" /function="enzyme; Amino acid biosynthesis: Phenylalanine" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9740056" /GO_process="GO:0009094 - L-phenylalanine biosynthetic process" /note="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible" /protein_id="NP_415275.1" /db_xref="GI:16128722" /db_xref="ASAP:ABE-0002560" /db_xref="UniProtKB/Swiss-Prot:P0AB91" /db_xref="ECOCYC:EG10079" /db_xref="EcoGene:EG10079" /db_xref="GeneID:945605" /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT DALLRQLANAVKARRG" repeat_region 785958..785992 /note="REP70 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(786066..786818) /gene="gpmA" /locus_tag="b0755" /gene_synonym="ECK0744; gpm; JW0738" /db_xref="ECOCYC:EG11699" /db_xref="EcoGene:EG11699" /db_xref="GeneID:945068" CDS complement(786066..786818) /gene="gpmA" /locus_tag="b0755" /gene_synonym="ECK0744; gpm; JW0738" /EC_number="5.4.2.1" /function="enzyme; Energy metabolism, carbon: Glycolysis" /GO_process="GO:0006094 - gluconeogenesis; GO:0006096 - glycolysis" /codon_start=1 /transl_table=11 /product="phosphoglyceromutase 1" /protein_id="NP_415276.1" /db_xref="GI:16128723" /db_xref="ASAP:ABE-0002563" /db_xref="UniProtKB/Swiss-Prot:P62707" /db_xref="ECOCYC:EG11699" /db_xref="EcoGene:EG11699" /db_xref="GeneID:945068" /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF DENFKPLKRYYLGNADEIAAKAAAVANQGKAK" mat_peptide complement(786069..786815) /gene="gpmA" /locus_tag="b0755" /gene_synonym="ECK0744; gpm; JW0738" /product="phosphoglyceromutase 1" /experiment="N-terminus verified by Edman degradation: PMID 8670822,8740179,9298646,9600841" gene complement(787020..788060) /gene="galM" /locus_tag="b0756" /gene_synonym="ECK0745; JW0739" /db_xref="ECOCYC:EG11698" /db_xref="EcoGene:EG11698" /db_xref="GeneID:944943" CDS complement(787020..788060) /gene="galM" /locus_tag="b0756" /gene_synonym="ECK0745; JW0739" /EC_number="5.1.3.3" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="galactose-1-epimerase (mutarotase)" /protein_id="NP_415277.1" /db_xref="GI:16128724" /db_xref="ASAP:ABE-0002566" /db_xref="UniProtKB/Swiss-Prot:P0A9C3" /db_xref="ECOCYC:EG11698" /db_xref="EcoGene:EG11698" /db_xref="GeneID:944943" /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE YSSLTEYQFIAE" gene complement(788054..789202) /gene="galK" /locus_tag="b0757" /gene_synonym="ECK0746; galA; JW0740" /db_xref="ECOCYC:EG10363" /db_xref="EcoGene:EG10363" /db_xref="GeneID:945358" CDS complement(788054..789202) /gene="galK" /locus_tag="b0757" /gene_synonym="ECK0746; galA; JW0740" /EC_number="2.7.1.6" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0009242 - colanic acid biosynthetic process; GO:0006012 - galactose metabolic process; GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="galactokinase" /protein_id="NP_415278.1" /db_xref="GI:16128725" /db_xref="ASAP:ABE-0002568" /db_xref="UniProtKB/Swiss-Prot:P0A6T3" /db_xref="ECOCYC:EG10363" /db_xref="EcoGene:EG10363" /db_xref="GeneID:945358" /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKH LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC" mat_peptide complement(788057..789199) /gene="galK" /locus_tag="b0757" /gene_synonym="ECK0746; galA; JW0740" /product="galactokinase" /experiment="N-terminus verified by Edman degradation: PMID 200486" gene complement(789206..790252) /gene="galT" /locus_tag="b0758" /gene_synonym="ECK0747; galB; JW0741" /db_xref="ECOCYC:EG10366" /db_xref="EcoGene:EG10366" /db_xref="GeneID:945357" CDS complement(789206..790252) /gene="galT" /locus_tag="b0758" /gene_synonym="ECK0747; galB; JW0741" /EC_number="2.7.7.10" /function="enzyme; Degradation of small molecules: Carbon compounds" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0009242 - colanic acid biosynthetic process; GO:0006012 - galactose metabolic process; GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="galactose-1-phosphate uridylyltransferase" /protein_id="NP_415279.1" /db_xref="GI:16128726" /db_xref="ASAP:ABE-0002573" /db_xref="UniProtKB/Swiss-Prot:P09148" /db_xref="ECOCYC:EG10366" /db_xref="EcoGene:EG10366" /db_xref="GeneID:945357" /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV LPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSA RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER LRAVSDIHFRESGV" mat_peptide complement(789209..790249) /gene="galT" /locus_tag="b0758" /gene_synonym="ECK0747; galB; JW0741" /product="galactose-1-phosphate uridylyltransferase" /experiment="N-terminus verified by Edman degradation: PMID 384209" gene complement(790262..791278) /gene="galE" /locus_tag="b0759" /gene_synonym="ECK0748; galD; JW0742" /db_xref="ECOCYC:EG10362" /db_xref="EcoGene:EG10362" /db_xref="GeneID:945354" CDS complement(790262..791278) /gene="galE" /locus_tag="b0759" /gene_synonym="ECK0748; galD; JW0742" /EC_number="5.1.3.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 4613352,9119048" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0009242 - colanic acid biosynthetic process; GO:0006012 - galactose metabolic process; GO:0009435 - NAD biosynthetic process; GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="UDP-galactose-4-epimerase" /protein_id="NP_415280.3" /db_xref="GI:49176045" /db_xref="ASAP:ABE-0002575" /db_xref="UniProtKB/Swiss-Prot:P09147" /db_xref="ECOCYC:EG10362" /db_xref="EcoGene:EG10362" /db_xref="GeneID:945354" /translation="MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAF SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ GYPD" repeat_region 791487..791520 /note="REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(791539..793011) /gene="modF" /locus_tag="b0760" /gene_synonym="chlD; ECK0749; JW0743; phrA" /db_xref="ECOCYC:EG11677" /db_xref="EcoGene:EG11677" /db_xref="GeneID:945368" CDS complement(791539..793011) /gene="modF" /locus_tag="b0760" /gene_synonym="chlD; ECK0749; JW0743; phrA" /function="transport; Transport of small molecules: Anions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0042888 - molybdenum ion transmembrane transporter activity" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="ATP-binding component of molybdate transport system" /codon_start=1 /transl_table=11 /product="fused molybdate transporter subunits of ABC superfamily: ATP-binding components" /protein_id="NP_415281.1" /db_xref="GI:16128728" /db_xref="ASAP:ABE-0002582" /db_xref="UniProtKB/Swiss-Prot:P31060" /db_xref="ECOCYC:EG11677" /db_xref="EcoGene:EG11677" /db_xref="GeneID:945368" /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILD EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK RTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY" gene complement(793079..793867) /gene="modE" /locus_tag="b0761" /gene_synonym="chlD; ECK0750; JW0744; modR" /db_xref="ECOCYC:G6395" /db_xref="EcoGene:EG13227" /db_xref="GeneID:945366" CDS complement(793079..793867) /gene="modE" /locus_tag="b0761" /gene_synonym="chlD; ECK0750; JW0744; modR" /function="regulator; Transport of small molecules: Anions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process; GO:0006350 - transcription" /note="molybdate uptake regulatory protein" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor for the molybdenum transport operon modABC" /protein_id="NP_415282.1" /db_xref="GI:16128729" /db_xref="ASAP:ABE-0002585" /db_xref="UniProtKB/Swiss-Prot:P0A9G8" /db_xref="ECOCYC:G6395" /db_xref="EcoGene:EG13227" /db_xref="GeneID:945366" /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCE VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC" gene 793996..794145 /gene="ybhT" /locus_tag="b0762" /gene_synonym="ECK0751; JW5102" /db_xref="ECOCYC:G6396" /db_xref="EcoGene:EG14328" /db_xref="GeneID:945365" CDS 793996..794145 /gene="ybhT" /locus_tag="b0762" /gene_synonym="ECK0751; JW5102" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415283.1" /db_xref="GI:16128730" /db_xref="ASAP:ABE-0002595" /db_xref="UniProtKB/Swiss-Prot:P0AAW9" /db_xref="ECOCYC:G6396" /db_xref="EcoGene:EG14328" /db_xref="GeneID:945365" /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ PGQNH" gene 794312..795085 /gene="modA" /locus_tag="b0763" /gene_synonym="ECK0752; JW0746" /db_xref="ECOCYC:EG12427" /db_xref="EcoGene:EG12427" /db_xref="GeneID:945364" CDS 794312..795085 /gene="modA" /locus_tag="b0763" /gene_synonym="ECK0752; JW0746" /function="transport; Transport of small molecules: Anions" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="molybdate-binding periplasmic protein; permease; periplasmic-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="molybdate transporter subunit" /protein_id="NP_415284.1" /db_xref="GI:16128731" /db_xref="ASAP:ABE-0002601" /db_xref="UniProtKB/Swiss-Prot:P37329" /db_xref="ECOCYC:EG12427" /db_xref="EcoGene:EG12427" /db_xref="GeneID:945364" /translation="MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDI ATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQ TLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKV EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK" mat_peptide 794384..795082 /gene="modA" /locus_tag="b0763" /gene_synonym="ECK0752; JW0746" /product="molybdate transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 8576221" gene 795085..795774 /gene="modB" /locus_tag="b0764" /gene_synonym="chlJ; ECK0753; JW0747" /db_xref="ECOCYC:EG10002" /db_xref="EcoGene:EG10002" /db_xref="GeneID:945361" CDS 795085..795774 /gene="modB" /locus_tag="b0764" /gene_synonym="chlJ; ECK0753; JW0747" /function="transport; Transport of small molecules: Anions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="molybdate transport permease protein; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="molybdate transporter subunit" /protein_id="NP_415285.1" /db_xref="GI:16128732" /db_xref="ASAP:ABE-0002603" /db_xref="UniProtKB/Swiss-Prot:P0AF01" /db_xref="ECOCYC:EG10002" /db_xref="EcoGene:EG10002" /db_xref="GeneID:945361" /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW LARISRERAGR" gene 795777..796835 /gene="modC" /locus_tag="b0765" /gene_synonym="chlD; ECK0754; JW0748; narD" /db_xref="ECOCYC:EG10152" /db_xref="EcoGene:EG10152" /db_xref="GeneID:945362" CDS 795777..796835 /gene="modC" /locus_tag="b0765" /gene_synonym="chlD; ECK0754; JW0748; narD" /EC_number="3.6.3.29" /function="transport; Transport of small molecules: Anions" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="ATP-binding component of molybdate transport" /codon_start=1 /transl_table=11 /product="molybdate transporter subunit" /protein_id="NP_415286.1" /db_xref="GI:16128733" /db_xref="ASAP:ABE-0002605" /db_xref="UniProtKB/Swiss-Prot:P09833" /db_xref="ECOCYC:EG10152" /db_xref="EcoGene:EG10152" /db_xref="GeneID:945362" /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMS KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA IKPGLWLYAQIKSVSITA" gene complement(796836..797654) /gene="ybhA" /locus_tag="b0766" /gene_synonym="ECK0755; JW0749; modD" /db_xref="ECOCYC:EG11239" /db_xref="EcoGene:EG11239" /db_xref="GeneID:945372" CDS complement(796836..797654) /gene="ybhA" /locus_tag="b0766" /gene_synonym="ECK0755; JW0749; modD" /function="putative enzyme; Not classified" /note="putative phosphatase" /codon_start=1 /transl_table=11 /product="pyridoxal phosphate (PLP) phosphatase" /protein_id="NP_415287.1" /db_xref="GI:16128734" /db_xref="ASAP:ABE-0002607" /db_xref="UniProtKB/Swiss-Prot:P21829" /db_xref="ECOCYC:EG11239" /db_xref="EcoGene:EG11239" /db_xref="GeneID:945372" /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHI HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI" gene 797809..798804 /gene="pgl" /locus_tag="b0767" /gene_synonym="blu; ECK0756; JW0750; ybhE" /db_xref="ECOCYC:G6397" /db_xref="EcoGene:EG13231" /db_xref="GeneID:946398" CDS 797809..798804 /gene="pgl" /locus_tag="b0767" /gene_synonym="blu; ECK0756; JW0750; ybhE" /EC_number="3.1.1.31" /function="orf; Not classified" /note="putative isomerase" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /protein_id="NP_415288.1" /db_xref="GI:16128735" /db_xref="ASAP:ABE-0002611" /db_xref="UniProtKB/Swiss-Prot:P52697" /db_xref="ECOCYC:G6397" /db_xref="EcoGene:EG13231" /db_xref="GeneID:946398" /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH" gene complement(798845..799798) /gene="ybhD" /locus_tag="b0768" /gene_synonym="ECK0757; JW5896" /db_xref="ECOCYC:G6398" /db_xref="EcoGene:EG13230" /db_xref="GeneID:944869" CDS complement(798845..799798) /gene="ybhD" /locus_tag="b0768" /gene_synonym="ECK0757; JW5896" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator LYSR-type" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415289.4" /db_xref="GI:145698233" /db_xref="ASAP:ABE-0002613" /db_xref="UniProtKB/Swiss-Prot:P52696" /db_xref="ECOCYC:G6398" /db_xref="EcoGene:EG13230" /db_xref="GeneID:944869" /translation="MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEED LHVQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPT AVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFT PLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLD WFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKD AVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG" gene 799982..801034 /gene="ybhH" /locus_tag="b0769" /gene_synonym="ECK0758; JW0752" /db_xref="ECOCYC:G6399" /db_xref="EcoGene:EG13664" /db_xref="GeneID:945375" CDS 799982..801034 /gene="ybhH" /locus_tag="b0769" /gene_synonym="ECK0758; JW0752" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415290.1" /db_xref="GI:16128737" /db_xref="ASAP:ABE-0002618" /db_xref="UniProtKB/Swiss-Prot:P0AAV8" /db_xref="ECOCYC:G6399" /db_xref="EcoGene:EG13664" /db_xref="GeneID:945375" /translation="MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGND LEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGA FAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVA LTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELD ADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRA LAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRAS VIRTTRKIFSGEVYLP" gene 801110..802543 /gene="ybhI" /locus_tag="b0770" /gene_synonym="ECK0759; JW0753" /db_xref="ECOCYC:G6400" /db_xref="EcoGene:EG13665" /db_xref="GeneID:945377" CDS 801110..802543 /gene="ybhI" /locus_tag="b0770" /gene_synonym="ECK0759; JW0753" /function="orf; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative membrane pump protein" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415291.1" /db_xref="GI:16128738" /db_xref="ASAP:ABE-0002621" /db_xref="UniProtKB/Swiss-Prot:P75763" /db_xref="ECOCYC:G6400" /db_xref="EcoGene:EG13665" /db_xref="GeneID:945377" /translation="MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIV GLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAA FVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSV AVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISW GGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLG VFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGII GLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAML PVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGA VLTILTFLVHITLGVWWWNMLIGWNML" gene 802726..804987 /gene="ybhJ" /locus_tag="b0771" /gene_synonym="ECK0760; JW5103" /db_xref="ECOCYC:G6401" /db_xref="EcoGene:EG13666" /db_xref="GeneID:945380" CDS 802726..804987 /gene="ybhJ" /locus_tag="b0771" /gene_synonym="ECK0760; JW5103" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="predicted hydratase" /protein_id="NP_415292.2" /db_xref="GI:90111167" /db_xref="ASAP:ABE-0002626" /db_xref="UniProtKB/Swiss-Prot:P75764" /db_xref="ECOCYC:G6401" /db_xref="EcoGene:EG13666" /db_xref="GeneID:945380" /translation="MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSS HNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGT INGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVK NKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQL NPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAH GKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPS SQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREG SKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQG FVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRS NPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPL QTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQM AEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIK AGSLINFNKNRQM" repeat_region 805027..805204 /note="REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(805221..806504) /gene="ybhC" /locus_tag="b0772" /gene_synonym="ECK0761; JW0755" /db_xref="ECOCYC:EG12875" /db_xref="EcoGene:EG12875" /db_xref="GeneID:945381" CDS complement(805221..806504) /gene="ybhC" /locus_tag="b0772" /gene_synonym="ECK0761; JW0755" /function="putative enzyme" /GO_component="GO:0009279 - cell outer membrane" /GO_process="GO:0008152 - metabolic process; GO:0000272 - polysaccharide catabolic process" /note="putative pectinesterase" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase, lipoprotein" /protein_id="NP_415293.1" /db_xref="GI:16128740" /db_xref="ASAP:ABE-0002629" /db_xref="UniProtKB/Swiss-Prot:P46130" /db_xref="ECOCYC:EG12875" /db_xref="EcoGene:EG12875" /db_xref="GeneID:945381" /translation="MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPI LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK" gene complement(806656..807132) /gene="ybhB" /locus_tag="b0773" /gene_synonym="ECK0762; JW0756" /db_xref="ECOCYC:EG11238" /db_xref="EcoGene:EG11238" /db_xref="GeneID:945383" CDS complement(806656..807132) /gene="ybhB" /locus_tag="b0773" /gene_synonym="ECK0762; JW0756" /codon_start=1 /transl_table=11 /product="kinase inhibitor homolog, UPF0098 family" /protein_id="NP_415294.1" /db_xref="GI:16128741" /db_xref="ASAP:ABE-0002632" /db_xref="UniProtKB/Swiss-Prot:P12994" /db_xref="ECOCYC:EG11238" /db_xref="EcoGene:EG11238" /db_xref="GeneID:945383" /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG YDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS" gene complement(807191..808480) /gene="bioA" /locus_tag="b0774" /gene_synonym="ECK0763; JW0757" /db_xref="ECOCYC:EG10117" /db_xref="EcoGene:EG10117" /db_xref="GeneID:945376" CDS complement(807191..808480) /gene="bioA" /locus_tag="b0774" /gene_synonym="ECK0763; JW0757" /EC_number="2.6.1.62" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /GO_process="GO:0009102 - biotin biosynthetic process" /note="7,8-diaminopelargonic acid synthetase" /codon_start=1 /transl_table=11 /product="7,8-diaminopelargonic acid synthase, PLP-dependent" /protein_id="NP_415295.1" /db_xref="GI:16128742" /db_xref="ASAP:ABE-0002635" /db_xref="UniProtKB/Swiss-Prot:P12995" /db_xref="ECOCYC:EG10117" /db_xref="EcoGene:EG10117" /db_xref="GeneID:945376" /translation="MTTDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRR LVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP LECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG GMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKAL TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ QVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRP FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ" gene 808567..809607 /gene="bioB" /locus_tag="b0775" /gene_synonym="ECK0764; JW0758" /db_xref="ECOCYC:EG10118" /db_xref="EcoGene:EG10118" /db_xref="GeneID:945370" CDS 808567..809607 /gene="bioB" /locus_tag="b0775" /gene_synonym="ECK0764; JW0758" /EC_number="2.8.1.6" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /experiment="N-terminus verified by Edman degradation: PMID 8142361" /GO_process="GO:0009102 - biotin biosynthetic process" /note="biotin synthesis, sulfur insertion?" /codon_start=1 /transl_table=11 /product="biotin synthase" /protein_id="NP_415296.1" /db_xref="GI:16128743" /db_xref="ASAP:ABE-0002644" /db_xref="UniProtKB/Swiss-Prot:P12996" /db_xref="ECOCYC:EG10118" /db_xref="EcoGene:EG10118" /db_xref="GeneID:945370" /translation="MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVST LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW KNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT PDTDEYYNAAAL" gene 809604..810758 /gene="bioF" /locus_tag="b0776" /gene_synonym="ECK0765; JW0759" /db_xref="ECOCYC:EG10121" /db_xref="EcoGene:EG10121" /db_xref="GeneID:945384" CDS 809604..810758 /gene="bioF" /locus_tag="b0776" /gene_synonym="ECK0765; JW0759" /EC_number="2.3.1.47" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /GO_process="GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="8-amino-7-oxononanoate synthase" /protein_id="NP_415297.1" /db_xref="GI:16128744" /db_xref="ASAP:ABE-0002646" /db_xref="UniProtKB/Swiss-Prot:P12998" /db_xref="ECOCYC:EG10121" /db_xref="EcoGene:EG10121" /db_xref="GeneID:945384" /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF SSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRA LLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLAR LLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQAL RASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG" gene 810745..811500 /gene="bioC" /locus_tag="b0777" /gene_synonym="ECK0766; JW0760" /db_xref="ECOCYC:EG10119" /db_xref="EcoGene:EG10119" /db_xref="GeneID:945388" CDS 810745..811500 /gene="bioC" /locus_tag="b0777" /gene_synonym="ECK0766; JW0760" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /GO_process="GO:0009102 - biotin biosynthetic process" /note="biotin biosynthesis; reaction prior to pimeloyl CoA" /codon_start=1 /transl_table=11 /product="predicted methltransferase, enzyme of biotin synthesis" /protein_id="NP_415298.1" /db_xref="GI:16128745" /db_xref="ASAP:ABE-0002648" /db_xref="UniProtKB/Swiss-Prot:P12999" /db_xref="ECOCYC:EG10119" /db_xref="EcoGene:EG10119" /db_xref="GeneID:945388" /translation="MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYT HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA TFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERP HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE" gene 811493..812170 /gene="bioD" /locus_tag="b0778" /gene_synonym="ECK0767; JW0761" /db_xref="ECOCYC:EG10120" /db_xref="EcoGene:EG10120" /db_xref="GeneID:945387" CDS 811493..812170 /gene="bioD" /locus_tag="b0778" /gene_synonym="ECK0767; JW0761" /EC_number="6.3.3.3" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /GO_process="GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="dethiobiotin synthetase" /protein_id="NP_415299.1" /db_xref="GI:16128746" /db_xref="ASAP:ABE-0002650" /db_xref="UniProtKB/Swiss-Prot:P13000" /db_xref="ECOCYC:EG10120" /db_xref="EcoGene:EG10120" /db_xref="GeneID:945387" /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGS EKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA QVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK YINLALL" mat_peptide 811496..812167 /gene="bioD" /locus_tag="b0778" /gene_synonym="ECK0767; JW0761" /product="dethiobiotin synthetase" /experiment="N-terminus verified by Edman degradation: PMID 8289297" gene 812749..814770 /gene="uvrB" /locus_tag="b0779" /gene_synonym="dar-1; dar-6; ECK0768; JW0762" /db_xref="ECOCYC:EG11062" /db_xref="EcoGene:EG11062" /db_xref="GeneID:945385" CDS 812749..814770 /gene="uvrB" /locus_tag="b0779" /gene_synonym="dar-1; dar-6; ECK0768; JW0762" /function="enzyme; Degradation of DNA" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006308 - DNA catabolic process; GO:0006281 - DNA repair; GO:0009314 - response to radiation; GO:0009432 - SOS response" /note="DNA repair; excision nuclease subunit B" /codon_start=1 /transl_table=11 /product="excinulease of nucleotide excision repair, DNA damage recognition component" /protein_id="NP_415300.1" /db_xref="GI:16128747" /db_xref="ASAP:ABE-0002658" /db_xref="UniProtKB/Swiss-Prot:P0A8F8" /db_xref="ECOCYC:EG11062" /db_xref="EcoGene:EG11062" /db_xref="GeneID:945385" /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS" mat_peptide 812752..814767 /gene="uvrB" /locus_tag="b0779" /gene_synonym="dar-1; dar-6; ECK0768; JW0762" /product="excinulease of nucleotide excision repair, DNA damage recognition component" /experiment="N-terminus verified by Edman degradation: PMID 3515321" repeat_region 814808..814904 /note="RIP73 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(814962..815870) /gene="ybhK" /locus_tag="b0780" /gene_synonym="ECK0769; JW0763" /db_xref="ECOCYC:G6402" /db_xref="EcoGene:EG13667" /db_xref="GeneID:945390" CDS complement(814962..815870) /gene="ybhK" /locus_tag="b0780" /gene_synonym="ECK0769; JW0763" /function="putative structure; Not classified" /note="putative structural protein" /codon_start=1 /transl_table=11 /product="predicted transferase with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415301.1" /db_xref="GI:16128748" /db_xref="ASAP:ABE-0002661" /db_xref="UniProtKB/Swiss-Prot:P75767" /db_xref="ECOCYC:G6402" /db_xref="EcoGene:EG13667" /db_xref="GeneID:945390" /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL EASDIPYRHDRQLLHNALEKALQALG" gene 816267..817256 /gene="moaA" /locus_tag="b0781" /gene_synonym="bisA; chlA; ECK0770; JW0764; narA" /db_xref="ECOCYC:EG11595" /db_xref="EcoGene:EG11595" /db_xref="GeneID:945392" CDS 816267..817256 /gene="moaA" /locus_tag="b0781" /gene_synonym="bisA; chlA; ECK0770; JW0764; narA" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /experiment="N-terminus verified by Edman degradation: PMID 8361352" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="molybdopterin biosynthesis, protein A" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein A" /protein_id="NP_415302.1" /db_xref="GI:16128749" /db_xref="ASAP:ABE-0002669" /db_xref="UniProtKB/Swiss-Prot:P30745" /db_xref="ECOCYC:EG11595" /db_xref="EcoGene:EG11595" /db_xref="GeneID:945392" /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK GFLTVDEIRRVTRAFARLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG YRLERDVASWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG" gene 817278..817790 /gene="moaB" /locus_tag="b0782" /gene_synonym="ECK0771; JW0765" /db_xref="ECOCYC:EG11596" /db_xref="EcoGene:EG11596" /db_xref="GeneID:945396" CDS 817278..817790 /gene="moaB" /locus_tag="b0782" /gene_synonym="ECK0771; JW0765" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="molybdopterin biosynthesis, protein B" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein B" /protein_id="NP_415303.1" /db_xref="GI:16128750" /db_xref="ASAP:ABE-0002671" /db_xref="UniProtKB/Swiss-Prot:P0AEZ9" /db_xref="ECOCYC:EG11596" /db_xref="EcoGene:EG11596" /db_xref="GeneID:945396" /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR PCNFHPHLKK" mat_peptide 817281..817787 /gene="moaB" /locus_tag="b0782" /gene_synonym="ECK0771; JW0765" /product="molybdopterin biosynthesis protein B" /experiment="N-terminus verified by Edman degradation: PMID 8361352" gene 817793..818278 /gene="moaC" /locus_tag="b0783" /gene_synonym="ECK0772; JW0766" /db_xref="ECOCYC:EG11666" /db_xref="EcoGene:EG11666" /db_xref="GeneID:945397" CDS 817793..818278 /gene="moaC" /locus_tag="b0783" /gene_synonym="ECK0772; JW0766" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis, protein C" /protein_id="NP_415304.1" /db_xref="GI:16128751" /db_xref="ASAP:ABE-0002673" /db_xref="UniProtKB/Swiss-Prot:P0A738" /db_xref="ECOCYC:EG11666" /db_xref="EcoGene:EG11666" /db_xref="GeneID:945397" /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD D" mat_peptide 817796..818275 /gene="moaC" /locus_tag="b0783" /gene_synonym="ECK0772; JW0766" /product="molybdopterin biosynthesis, protein C" /experiment="N-terminus verified by Edman degradation: PMID 8361352" gene 818271..818516 /gene="moaD" /locus_tag="b0784" /gene_synonym="chlM; ECK0773; JW0767" /db_xref="ECOCYC:EG11597" /db_xref="EcoGene:EG11597" /db_xref="GeneID:945398" CDS 818271..818516 /gene="moaD" /locus_tag="b0784" /gene_synonym="chlM; ECK0773; JW0767" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /experiment="N-terminus verified by Edman degradation: PMID 8514782" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="molybdopterin biosynthesis" /codon_start=1 /transl_table=11 /product="molybdopterin synthase, small subunit" /protein_id="NP_415305.1" /db_xref="GI:16128752" /db_xref="ASAP:ABE-0002675" /db_xref="UniProtKB/Swiss-Prot:P30748" /db_xref="ECOCYC:EG11597" /db_xref="EcoGene:EG11597" /db_xref="GeneID:945398" /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWAL ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG" gene 818518..818970 /gene="moaE" /locus_tag="b0785" /gene_synonym="ECK0774; JW0768" /db_xref="ECOCYC:EG11598" /db_xref="EcoGene:EG11598" /db_xref="GeneID:945399" CDS 818518..818970 /gene="moaE" /locus_tag="b0785" /gene_synonym="ECK0774; JW0768" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="molybdopterin converting factor, subunit 2" /codon_start=1 /transl_table=11 /product="molybdopterin synthase, large subunit" /protein_id="NP_415306.1" /db_xref="GI:16128753" /db_xref="ASAP:ABE-0002678" /db_xref="UniProtKB/Swiss-Prot:P30749" /db_xref="ECOCYC:EG11598" /db_xref="EcoGene:EG11598" /db_xref="GeneID:945399" /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG DSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSA HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW" mat_peptide 818521..818967 /gene="moaE" /locus_tag="b0785" /gene_synonym="ECK0774; JW0768" /product="molybdopterin synthase, large subunit" /experiment="N-terminus verified by Edman degradation: PMID 8361352,8514782" repeat_region 818981..819007 /note="REP74 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 819107..819811 /gene="ybhL" /locus_tag="b0786" /gene_synonym="ECK0775; JW0769" /db_xref="ECOCYC:G6403" /db_xref="EcoGene:EG13668" /db_xref="GeneID:945401" CDS 819107..819811 /gene="ybhL" /locus_tag="b0786" /gene_synonym="ECK0775; JW0769" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="inner membrane protein, UPF0005 family" /protein_id="NP_415307.1" /db_xref="GI:16128754" /db_xref="ASAP:ABE-0002685" /db_xref="UniProtKB/Swiss-Prot:P0AAC4" /db_xref="ECOCYC:G6403" /db_xref="EcoGene:EG13668" /db_xref="GeneID:945401" /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD FINLFLMLLRIFGNRR" gene 820016..820729 /gene="ybhM" /locus_tag="b0787" /gene_synonym="ECK0776; JW0770" /db_xref="ECOCYC:G6404" /db_xref="EcoGene:EG13669" /db_xref="GeneID:949001" CDS 820016..820729 /gene="ybhM" /locus_tag="b0787" /gene_synonym="ECK0776; JW0770" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="inner membrane protein, UPF0005 family" /protein_id="NP_415308.1" /db_xref="GI:16128755" /db_xref="ASAP:ABE-0002688" /db_xref="UniProtKB/Swiss-Prot:P75769" /db_xref="ECOCYC:G6404" /db_xref="EcoGene:EG13669" /db_xref="GeneID:949001" /translation="MESYSQNSNKLDFQHEARILNGIWLITALGLVATAGLAWGAKYI EITATKYDSPPMYVAIGLLLLCMYGLSKDINKINAAIAGVIYLFLLSLVAIVVASLVP VYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERP IWIISCLMIVLWSGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFG ILAAIAITLVWQRHTRFFH" gene complement(820765..821721) /gene="ybhN" /locus_tag="b0788" /gene_synonym="ECK0777; JW0771" /db_xref="ECOCYC:G6405" /db_xref="EcoGene:EG13670" /db_xref="GeneID:945410" CDS complement(820765..821721) /gene="ybhN" /locus_tag="b0788" /gene_synonym="ECK0777; JW0771" /codon_start=1 /transl_table=11 /product="conserved inner membrane protein" /protein_id="NP_415309.1" /db_xref="GI:16128756" /db_xref="ASAP:ABE-0002690" /db_xref="UniProtKB/Swiss-Prot:P75770" /db_xref="ECOCYC:G6405" /db_xref="EcoGene:EG13670" /db_xref="GeneID:945410" /translation="MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIR DYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTW VGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVD QTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMV MGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGT IIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM" gene complement(821721..822962) /gene="ybhO" /locus_tag="b0789" /gene_synonym="ECK0778; JW0772" /db_xref="ECOCYC:G6406" /db_xref="EcoGene:EG13671" /db_xref="GeneID:945409" CDS complement(821721..822962) /gene="ybhO" /locus_tag="b0789" /gene_synonym="ECK0778; JW0772" /EC_number="2.7.8.-" /function="orf; Not classified" /GO_process="GO:0008654 - phospholipid biosynthetic process" /note="cardiolipin synthase activity" /codon_start=1 /transl_table=11 /product="cardiolipin synthase 2" /protein_id="NP_415310.1" /db_xref="GI:16128757" /db_xref="ASAP:ABE-0002692" /db_xref="UniProtKB/Swiss-Prot:P0AA84" /db_xref="ECOCYC:G6406" /db_xref="EcoGene:EG13671" /db_xref="GeneID:945409" /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE DDVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLF GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPRLAQVDP PAQPTMETQDRVETENTGVKP" gene complement(822959..823720) /gene="ybhP" /locus_tag="b0790" /gene_synonym="ECK0779; JW0773" /db_xref="ECOCYC:G6407" /db_xref="EcoGene:EG13672" /db_xref="GeneID:945408" CDS complement(822959..823720) /gene="ybhP" /locus_tag="b0790" /gene_synonym="ECK0779; JW0773" /GO_process="GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="conserved protein, endo/exonuclease/phosphatase family PFAM PF03372" /protein_id="NP_415311.1" /db_xref="GI:16128758" /db_xref="ASAP:ABE-0002696" /db_xref="UniProtKB/Swiss-Prot:P0AAW1" /db_xref="ECOCYC:G6407" /db_xref="EcoGene:EG13672" /db_xref="GeneID:945408" /translation="MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADI VCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRY PIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLD RIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL" gene 823853..824263 /gene="ybhQ" /locus_tag="b0791" /gene_synonym="ECK0780; JW0774" /db_xref="ECOCYC:G6408" /db_xref="EcoGene:EG13673" /db_xref="GeneID:945405" CDS 823853..824263 /gene="ybhQ" /locus_tag="b0791" /gene_synonym="ECK0780; JW0774" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="NP_415312.1" /db_xref="GI:16128759" /db_xref="ASAP:ABE-0002699" /db_xref="UniProtKB/Swiss-Prot:P0AAW5" /db_xref="ECOCYC:G6408" /db_xref="EcoGene:EG13673" /db_xref="GeneID:945405" /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR" gene complement(824225..825331) /gene="ybhR" /locus_tag="b0792" /gene_synonym="ECK0781; JW5803" /db_xref="ECOCYC:G6409" /db_xref="EcoGene:EG13674" /db_xref="GeneID:945403" CDS complement(824225..825331) /gene="ybhR" /locus_tag="b0792" /gene_synonym="ECK0781; JW5803" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted transporter subunit: membrane component of ABC superfamily" /protein_id="NP_415313.1" /db_xref="GI:16128760" /db_xref="ASAP:ABE-0002701" /db_xref="UniProtKB/Swiss-Prot:P0AFP9" /db_xref="ECOCYC:G6409" /db_xref="EcoGene:EG13674" /db_xref="GeneID:945403" /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP ADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELV VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM" gene complement(825342..826475) /gene="ybhS" /locus_tag="b0793" /gene_synonym="ECK0782; JW0777" /db_xref="ECOCYC:G6410" /db_xref="EcoGene:EG13675" /db_xref="GeneID:945411" CDS complement(825342..826475) /gene="ybhS" /locus_tag="b0793" /gene_synonym="ECK0782; JW0777" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted transporter subunit: membrane component of ABC superfamily" /protein_id="NP_415314.1" /db_xref="GI:16128761" /db_xref="ASAP:ABE-0002703" /db_xref="UniProtKB/Swiss-Prot:P0AFQ2" /db_xref="ECOCYC:G6410" /db_xref="EcoGene:EG13675" /db_xref="GeneID:945411" /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD" gene complement(826468..828204) /gene="ybhF" /locus_tag="b0794" /gene_synonym="ECK0783; JW5104" /db_xref="ECOCYC:G6411" /db_xref="EcoGene:EG13314" /db_xref="GeneID:945413" CDS complement(826468..828204) /gene="ybhF" /locus_tag="b0794" /gene_synonym="ECK0783; JW5104" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="fused predicted transporter subunits of ABC superfamily: ATP-binding components" /protein_id="NP_415315.4" /db_xref="GI:90111168" /db_xref="ASAP:ABE-0002707" /db_xref="UniProtKB/Swiss-Prot:P0A9U1" /db_xref="ECOCYC:G6411" /db_xref="EcoGene:EG13314" /db_xref="GeneID:945413" /translation="MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGA GKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL LLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ LIHDWDKEHSNE" gene complement(828197..829195) /gene="ybhG" /locus_tag="b0795" /gene_synonym="ECK0784; JW0779" /db_xref="ECOCYC:G6412" /db_xref="EcoGene:EG13315" /db_xref="GeneID:945414" CDS complement(828197..829195) /gene="ybhG" /locus_tag="b0795" /gene_synonym="ECK0784; JW0779" /function="putative membrane; Not classified" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor" /protein_id="NP_415316.1" /db_xref="GI:16128763" /db_xref="ASAP:ABE-0002709" /db_xref="UniProtKB/Swiss-Prot:P75777" /db_xref="ECOCYC:G6412" /db_xref="EcoGene:EG13315" /db_xref="GeneID:945414" /translation="MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRT VNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLML AGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTR AVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQ IGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE" gene complement(829195..829866) /gene="ybiH" /locus_tag="b0796" /gene_synonym="ECK0785; JW0780" /db_xref="ECOCYC:EG12406" /db_xref="EcoGene:EG12406" /db_xref="GeneID:945421" CDS complement(829195..829866) /gene="ybiH" /locus_tag="b0796" /gene_synonym="ECK0785; JW0780" /function="putative regulator; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415317.4" /db_xref="GI:162135896" /db_xref="ASAP:ABE-0002711" /db_xref="UniProtKB/Swiss-Prot:P0ACU0" /db_xref="ECOCYC:EG12406" /db_xref="EcoGene:EG12406" /db_xref="GeneID:945421" /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQN IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL SQRSL" gene 830095..831459 /gene="rhlE" /locus_tag="b0797" /gene_synonym="ECK0786; JW0781" /db_xref="ECOCYC:EG11235" /db_xref="EcoGene:EG11235" /db_xref="GeneID:945425" CDS 830095..831459 /gene="rhlE" /locus_tag="b0797" /gene_synonym="ECK0786; JW0781" /function="putative enzyme; Not classified" /GO_process="GO:0009451 - RNA modification" /note="putative ATP-dependent RNA helicase" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_415318.1" /db_xref="GI:16128765" /db_xref="ASAP:ABE-0002719" /db_xref="UniProtKB/Swiss-Prot:P25888" /db_xref="ECOCYC:EG11235" /db_xref="EcoGene:EG11235" /db_xref="GeneID:945425" /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH GNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP AAAQ" repeat_region 831512..831609 /note="RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(831691..832173) /gene="ybiA" /locus_tag="b0798" /gene_synonym="ECK0787; JW0783" /db_xref="ECOCYC:EG11579" /db_xref="EcoGene:EG11579" /db_xref="GeneID:945426" CDS complement(831691..832173) /gene="ybiA" /locus_tag="b0798" /gene_synonym="ECK0787; JW0783" /codon_start=1 /transl_table=11 /product="conserved protein, DUF1768 family" /protein_id="NP_415319.1" /db_xref="GI:16128766" /db_xref="ASAP:ABE-0002722" /db_xref="UniProtKB/Swiss-Prot:P30176" /db_xref="ECOCYC:EG11579" /db_xref="EcoGene:EG11579" /db_xref="GeneID:945426" /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWESVKEQVMRKALR AKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEK" gene 832293..834443 /gene="dinG" /locus_tag="b0799" /gene_synonym="ECK0788; JW0784; rarB" /db_xref="ECOCYC:EG11357" /db_xref="EcoGene:EG11357" /db_xref="GeneID:945431" CDS 832293..834443 /gene="dinG" /locus_tag="b0799" /gene_synonym="ECK0788; JW0784; rarB" /function="putative enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006281 - DNA repair; GO:0009432 - SOS response" /note="probably ATP-dependent helicase" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase" /protein_id="NP_415320.1" /db_xref="GI:16128767" /db_xref="ASAP:ABE-0002732" /db_xref="UniProtKB/Swiss-Prot:P27296" /db_xref="ECOCYC:EG11357" /db_xref="EcoGene:EG11357" /db_xref="GeneID:945431" /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVE PSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR" gene 834471..835433 /gene="ybiB" /locus_tag="b0800" /gene_synonym="ECK0789; JW0785" /db_xref="ECOCYC:EG11580" /db_xref="EcoGene:EG11580" /db_xref="GeneID:945424" CDS 834471..835433 /gene="ybiB" /locus_tag="b0800" /gene_synonym="ECK0789; JW0785" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="predicted transferase/phosphorylase" /protein_id="NP_415321.1" /db_xref="GI:16128768" /db_xref="ASAP:ABE-0002734" /db_xref="UniProtKB/Swiss-Prot:P30177" /db_xref="ECOCYC:EG11580" /db_xref="EcoGene:EG11580" /db_xref="GeneID:945424" /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQ WIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF" repeat_region 835445..835468 /note="REP76 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 835574..836659 /gene="ybiC" /locus_tag="b0801" /gene_synonym="ECK0790; JW0786" /db_xref="ECOCYC:EG11581" /db_xref="EcoGene:EG11581" /db_xref="GeneID:945412" CDS 835574..836659 /gene="ybiC" /locus_tag="b0801" /gene_synonym="ECK0790; JW0786" /function="putative enzyme; Not classified" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="predicted dehydrogenase" /protein_id="NP_415322.1" /db_xref="GI:16128769" /db_xref="ASAP:ABE-0002738" /db_xref="UniProtKB/Swiss-Prot:P30178" /db_xref="ECOCYC:EG11581" /db_xref="EcoGene:EG11581" /db_xref="GeneID:945412" /translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG HDSHGIGMIPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAMALGI EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA VMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII INPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGS WQAICDAARQIGMPEETLQAFCQQLAS" repeat_region 836762..836884 /note="REP77 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(836888..837148) /gene="ybiJ" /locus_tag="b0802" /gene_synonym="ECK0791; JW0787" /db_xref="ECOCYC:EG12422" /db_xref="EcoGene:EG12422" /db_xref="GeneID:945433" CDS complement(836888..837148) /gene="ybiJ" /locus_tag="b0802" /gene_synonym="ECK0791; JW0787" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415323.1" /db_xref="GI:16128770" /db_xref="ASAP:ABE-0002741" /db_xref="UniProtKB/Swiss-Prot:P0AAX3" /db_xref="ECOCYC:EG12422" /db_xref="EcoGene:EG12422" /db_xref="GeneID:945433" /translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG ASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK" gene complement(837413..837679) /gene="ybiI" /locus_tag="b0803" /gene_synonym="ECK0792; JW0788" /db_xref="ECOCYC:EG12421" /db_xref="EcoGene:EG12421" /db_xref="GeneID:945434" CDS complement(837413..837679) /gene="ybiI" /locus_tag="b0803" /gene_synonym="ECK0792; JW0788" /codon_start=1 /transl_table=11 /product="DksA-type zinc finger protein, function unknown" /protein_id="NP_415324.1" /db_xref="GI:16128771" /db_xref="ASAP:ABE-0002744" /db_xref="UniProtKB/Swiss-Prot:P41039" /db_xref="ECOCYC:EG12421" /db_xref="EcoGene:EG12421" /db_xref="GeneID:945434" /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGA PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR" gene complement(837753..838430) /gene="ybiX" /locus_tag="b0804" /gene_synonym="ECK0793; JW5105" /db_xref="ECOCYC:G6413" /db_xref="EcoGene:EG13316" /db_xref="GeneID:947502" CDS complement(837753..838430) /gene="ybiX" /locus_tag="b0804" /gene_synonym="ECK0793; JW5105" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="conserved protein, Fe(II)-dependent oxygenase superfamily" /protein_id="NP_415325.4" /db_xref="GI:90111170" /db_xref="ASAP:ABE-0002746" /db_xref="UniProtKB/Swiss-Prot:P75779" /db_xref="ECOCYC:G6413" /db_xref="EcoGene:EG13316" /db_xref="GeneID:947502" /translation="MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQ QVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVR SHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCV TPVTRGVRVASFMWIQSMIRDDKKRAMLFELDNNIQSLKSRYGESEEILSLLNLYHNL LREWSEI" gene complement(838472..840754) /gene="fiu" /locus_tag="b0805" /gene_synonym="ECK0794; JW0790; ybiL" /db_xref="ECOCYC:G6414" /db_xref="EcoGene:EG13317" /db_xref="GeneID:946246" CDS complement(838472..840754) /gene="fiu" /locus_tag="b0805" /gene_synonym="ECK0794; JW0790; ybiL" /function="putative membrane; Not classified" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006826 - iron ion transport" /note="ferric iron outer membrane transporter, TonB-dependent; siderophore receptor for ferri-dihydroxybenzoylserine, ferri-dihydroxybenzoate and other catecholate siderophores; surface receptor for colicins G, H, and E492" /codon_start=1 /transl_table=11 /product="catecholate siderophore receptor Fiu" /protein_id="NP_415326.1" /db_xref="GI:16128773" /db_xref="ASAP:ABE-0002749" /db_xref="UniProtKB/Swiss-Prot:P75780" /db_xref="ECOCYC:G6414" /db_xref="EcoGene:EG13317" /db_xref="GeneID:946246" /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVG AFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGE KTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSA PSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVK QDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGH DVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYA FDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCPTGVAKGSPVTTVDTAK SGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTDFKPQKA NTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNI TPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGAR YIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKS GYRYHPGEPRTFLLTANMHF" gene complement(841019..841279) /gene="mcbA" /locus_tag="b0806" /gene_synonym="ECK0795; JW5106; ybiM" /db_xref="ECOCYC:G6415" /db_xref="EcoGene:EG13318" /db_xref="GeneID:947523" CDS complement(841019..841279) /gene="mcbA" /locus_tag="b0806" /gene_synonym="ECK0795; JW5106; ybiM" /codon_start=1 /transl_table=11 /product="colanic acid mucoidy stimulation protein" /protein_id="NP_415327.2" /db_xref="GI:90111171" /db_xref="ASAP:ABE-0002753" /db_xref="UniProtKB/Swiss-Prot:P0AAX6" /db_xref="ECOCYC:G6415" /db_xref="EcoGene:EG13318" /db_xref="GeneID:947523" /translation="MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATG ASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK" gene 841555..842481 /gene="rlmF" /locus_tag="b0807" /gene_synonym="ECK0796; JW5107; ybiN" /db_xref="ECOCYC:G6416" /db_xref="EcoGene:EG13319" /db_xref="GeneID:944938" CDS 841555..842481 /gene="rlmF" /locus_tag="b0807" /gene_synonym="ECK0796; JW5107; ybiN" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA mA1618 methyltransferase, SAM-dependent" /protein_id="NP_415328.4" /db_xref="GI:162135897" /db_xref="ASAP:ABE-0002757" /db_xref="UniProtKB/Swiss-Prot:P75782" /db_xref="ECOCYC:G6416" /db_xref="EcoGene:EG13319" /db_xref="GeneID:944938" /translation="MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLR RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG QQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR" gene complement(842478..844703) /gene="ybiO" /locus_tag="b0808" /gene_synonym="ECK0797; JW5108" /db_xref="ECOCYC:G6417" /db_xref="EcoGene:EG13320" /db_xref="GeneID:945935" CDS complement(842478..844703) /gene="ybiO" /locus_tag="b0808" /gene_synonym="ECK0797; JW5108" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicted mechanosensitive channel" /protein_id="NP_415329.4" /db_xref="GI:90111173" /db_xref="ASAP:ABE-0002760" /db_xref="UniProtKB/Swiss-Prot:P75783" /db_xref="ECOCYC:G6417" /db_xref="EcoGene:EG13320" /db_xref="GeneID:945935" /translation="MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCAL PLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIG YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTL RVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPT L" repeat_region 844854..844952 /note="RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(844964..845686) /gene="glnQ" /locus_tag="b0809" /gene_synonym="ECK0798; JW0794" /db_xref="ECOCYC:EG10389" /db_xref="EcoGene:EG10389" /db_xref="GeneID:945435" CDS complement(844964..845686) /gene="glnQ" /locus_tag="b0809" /gene_synonym="ECK0798; JW0794" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006542 - glutamine biosynthetic process" /note="ATP-binding component of glutamine high-affinity transport system" /codon_start=1 /transl_table=11 /product="glutamine transporter subunit" /protein_id="NP_415330.1" /db_xref="GI:16128777" /db_xref="ASAP:ABE-0002764" /db_xref="UniProtKB/Swiss-Prot:P10346" /db_xref="ECOCYC:EG10389" /db_xref="EcoGene:EG10389" /db_xref="GeneID:945435" /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG NPQVLIKNPPSQRLQEFLQHVS" gene complement(845683..846342) /gene="glnP" /locus_tag="b0810" /gene_synonym="ECK0799; JW0795" /db_xref="ECOCYC:EG10388" /db_xref="EcoGene:EG10388" /db_xref="GeneID:945621" CDS complement(845683..846342) /gene="glnP" /locus_tag="b0810" /gene_synonym="ECK0799; JW0795" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006542 - glutamine biosynthetic process" /note="glutamine high-affinity transport system; membrane component" /codon_start=1 /transl_table=11 /product="glutamine transporter subunit" /protein_id="NP_415331.1" /db_xref="GI:16128778" /db_xref="ASAP:ABE-0002766" /db_xref="UniProtKB/Swiss-Prot:P0AEQ6" /db_xref="ECOCYC:EG10388" /db_xref="EcoGene:EG10388" /db_xref="GeneID:945621" /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI L" gene complement(846481..847227) /gene="glnH" /locus_tag="b0811" /gene_synonym="ECK0800; JW0796" /db_xref="ECOCYC:EG10386" /db_xref="EcoGene:EG10386" /db_xref="GeneID:944872" CDS complement(846481..847227) /gene="glnH" /locus_tag="b0811" /gene_synonym="ECK0800; JW0796" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006542 - glutamine biosynthetic process" /note="periplasmic glutamine-binding protein; permease" /codon_start=1 /transl_table=11 /product="glutamine transporter subunit" /protein_id="NP_415332.1" /db_xref="GI:16128779" /db_xref="ASAP:ABE-0002771" /db_xref="UniProtKB/Swiss-Prot:P0AEQ3" /db_xref="ECOCYC:EG10386" /db_xref="EcoGene:EG10386" /db_xref="GeneID:944872" /translation="MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGD KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL RDKVNGALKTLRENGTYNEIYKKWFGTEPK" mat_peptide complement(846484..847161) /gene="glnH" /locus_tag="b0811" /gene_synonym="ECK0800; JW0796" /product="glutamine transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 3027504,9298646,9740056" gene complement(847631..848134) /gene="dps" /locus_tag="b0812" /gene_synonym="ECK0801; JW0797; pexB; vtm" /db_xref="ECOCYC:EG11415" /db_xref="EcoGene:EG11415" /db_xref="GeneID:945101" CDS complement(847631..848134) /gene="dps" /locus_tag="b0812" /gene_synonym="ECK0801; JW0797; pexB; vtm" /function="regulator; Global regulatory functions" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0042594 - response to starvation" /note="global regulator, starvation conditions" /codon_start=1 /transl_table=11 /product="Fe-binding and storage protein" /protein_id="NP_415333.1" /db_xref="GI:16128780" /db_xref="ASAP:ABE-0002776" /db_xref="UniProtKB/Swiss-Prot:P0ABT2" /db_xref="ECOCYC:EG11415" /db_xref="EcoGene:EG11415" /db_xref="GeneID:945101" /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW FIESNIE" mat_peptide complement(847634..848131) /gene="dps" /locus_tag="b0812" /gene_synonym="ECK0801; JW0797; pexB; vtm" /product="Fe-binding and storage protein" /experiment="N-terminus verified by Edman degradation: PMID 7984106,8354462,9298646" gene complement(848433..849320) /gene="rhtA" /locus_tag="b0813" /gene_synonym="ECK0802; JW0798; ybiF" /db_xref="ECOCYC:EG12134" /db_xref="EcoGene:EG12134" /db_xref="GeneID:947045" CDS complement(848433..849320) /gene="rhtA" /locus_tag="b0813" /gene_synonym="ECK0802; JW0798; ybiF" /function="putative membrane; Not classified" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /note="putative transmembrane subunit" /codon_start=1 /transl_table=11 /product="threonine and homoserine efflux system" /protein_id="NP_415334.1" /db_xref="GI:16128781" /db_xref="ASAP:ABE-0002779" /db_xref="UniProtKB/Swiss-Prot:P0AA67" /db_xref="ECOCYC:EG12134" /db_xref="EcoGene:EG12134" /db_xref="GeneID:947045" /translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVT ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS MGSTLTVRKESKIKELDIN" gene 849673..850188 /gene="ompX" /locus_tag="b0814" /gene_synonym="ECK0803; JW0799; ybiG" /db_xref="ECOCYC:EG12117" /db_xref="EcoGene:EG12135" /db_xref="GeneID:944967" CDS 849673..850188 /gene="ompX" /locus_tag="b0814" /gene_synonym="ECK0803; JW0799; ybiG" /function="membrane; Outer membrane constituents" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="outer membrane protein X" /protein_id="NP_415335.1" /db_xref="GI:16128782" /db_xref="ASAP:ABE-0002784" /db_xref="UniProtKB/Swiss-Prot:P0A917" /db_xref="ECOCYC:EG12117" /db_xref="EcoGene:EG12135" /db_xref="GeneID:944967" /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV GTWIAGVGYRF" mat_peptide 849742..850185 /gene="ompX" /locus_tag="b0814" /gene_synonym="ECK0803; JW0799; ybiG" /product="outer membrane protein X" /experiment="N-terminus verified by Edman degradation: PMID 9629924" gene complement(850237..851820) /gene="ybiP" /locus_tag="b0815" /gene_synonym="ECK0804; JW0800" /db_xref="ECOCYC:G6418" /db_xref="EcoGene:EG13321" /db_xref="GeneID:945360" CDS complement(850237..851820) /gene="ybiP" /locus_tag="b0815" /gene_synonym="ECK0804; JW0800" /function="putative enzyme; Not classified" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="predicted hydrolase, inner membrane" /protein_id="NP_415336.1" /db_xref="GI:16128783" /db_xref="ASAP:ABE-0002786" /db_xref="UniProtKB/Swiss-Prot:P75785" /db_xref="ECOCYC:G6418" /db_xref="EcoGene:EG13321" /db_xref="GeneID:945360" /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF QLQKVDYNHLGTDIFDPKP" gene 851894..852163 /gene="yliL" /locus_tag="b0816" /gene_synonym="ECK0805; JW5969" /db_xref="ECOCYC:G6419" /db_xref="EcoGene:EG14410" /db_xref="GeneID:945436" CDS 851894..852163 /gene="yliL" /locus_tag="b0816" /gene_synonym="ECK0805; JW5969" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415337.1" /db_xref="GI:16128784" /db_xref="ASAP:ABE-0002789" /db_xref="UniProtKB/Swiss-Prot:P75786" /db_xref="ECOCYC:G6419" /db_xref="EcoGene:EG14410" /db_xref="GeneID:945436" /translation="MERGPHPRAAIYAGLQEDRASRRSGQLLTNKSFAKGIANPTKSG VFQTKTRYACMKAGVKRRTATPLFIGRFILLRFVVDHIAQHREQH" gene complement(852175..852263) /gene="rybA" /locus_tag="b4416" /gene_synonym="ECK0806; JWR0226" /db_xref="ECOCYC:G0-8881" /db_xref="EcoGene:EG31136" /db_xref="GeneID:2847681" ncRNA complement(852175..852263) /gene="rybA" /locus_tag="b4416" /gene_synonym="ECK0806; JWR0226" /ncRNA_class="other" /product="novel Novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047240" /db_xref="ECOCYC:G0-8881" /db_xref="EcoGene:EG31136" /db_xref="GeneID:2847681" gene 852406..852873 /gene="mntR" /locus_tag="b0817" /gene_synonym="ECK0807; JW0801; ybiQ" /db_xref="ECOCYC:G6420" /db_xref="EcoGene:EG13322" /db_xref="GeneID:945437" CDS 852406..852873 /gene="mntR" /locus_tag="b0817" /gene_synonym="ECK0807; JW0801; ybiQ" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator of mntH" /protein_id="NP_415338.1" /db_xref="GI:16128785" /db_xref="ASAP:ABE-0002793" /db_xref="UniProtKB/Swiss-Prot:P0A9F1" /db_xref="ECOCYC:G6420" /db_xref="EcoGene:EG13322" /db_xref="GeneID:945437" /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK" gene 852870..853988 /gene="ybiR" /locus_tag="b0818" /gene_synonym="ECK0808; JW0802" /db_xref="ECOCYC:G6421" /db_xref="EcoGene:EG13323" /db_xref="GeneID:945438" CDS 852870..853988 /gene="ybiR" /locus_tag="b0818" /gene_synonym="ECK0808; JW0802" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415339.1" /db_xref="GI:16128786" /db_xref="ASAP:ABE-0002795" /db_xref="UniProtKB/Swiss-Prot:P75788" /db_xref="ECOCYC:G6421" /db_xref="EcoGene:EG13323" /db_xref="GeneID:945438" /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI AQMAPLAGAMMLTLLLLCWCCFPGKAMQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLVWAVNVGGFGLLPGSLANLIA LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN" gene complement(854047..854967) /gene="ybiS" /locus_tag="b0819" /gene_synonym="ECK0809; JW0803" /db_xref="ECOCYC:G6422" /db_xref="EcoGene:EG13324" /db_xref="GeneID:945441" CDS complement(854047..854967) /gene="ybiS" /locus_tag="b0819" /gene_synonym="ECK0809; JW0803" /function="enzyme; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="L,D-transpeptidase linking Lpp to murein" /protein_id="NP_415340.1" /db_xref="GI:16128787" /db_xref="ASAP:ABE-0002797" /db_xref="UniProtKB/Swiss-Prot:P0AAX8" /db_xref="ECOCYC:G6422" /db_xref="EcoGene:EG13324" /db_xref="GeneID:945441" /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN" mat_peptide complement(854050..854895) /gene="ybiS" /locus_tag="b0819" /gene_synonym="ECK0809; JW0803" /product="L,D-transpeptidase linking Lpp to murein" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene 855186..856778 /gene="ybiT" /locus_tag="b0820" /gene_synonym="ECK0810; JW0804" /db_xref="ECOCYC:G6423" /db_xref="EcoGene:EG13325" /db_xref="GeneID:945440" CDS 855186..856778 /gene="ybiT" /locus_tag="b0820" /gene_synonym="ECK0810; JW0804" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="fused predicted transporter subunits of ABC superfamily: ATP-binding components" /protein_id="NP_415341.1" /db_xref="GI:16128788" /db_xref="ASAP:ABE-0002801" /db_xref="UniProtKB/Swiss-Prot:P0A9U3" /db_xref="ECOCYC:G6423" /db_xref="EcoGene:EG13325" /db_xref="GeneID:945440" /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHE YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI TPERVIDFSGNYEDYLRSKGIE" repeat_region 856839..856936 /note="RIP79 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(857019..858284) /gene="ybiU" /locus_tag="b0821" /gene_synonym="ECK0811; JW0805" /db_xref="ECOCYC:G6424" /db_xref="EcoGene:EG13326" /db_xref="GeneID:945439" CDS complement(857019..858284) /gene="ybiU" /locus_tag="b0821" /gene_synonym="ECK0811; JW0805" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415342.1" /db_xref="GI:16128789" /db_xref="ASAP:ABE-0002804" /db_xref="UniProtKB/Swiss-Prot:P75791" /db_xref="ECOCYC:G6424" /db_xref="EcoGene:EG13326" /db_xref="GeneID:945439" /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW DQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQS FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP REDYETNWEGRFTLADLNIHGKRALGMDV" gene complement(858436..859251) /gene="ybiV" /locus_tag="b0822" /gene_synonym="ECK0812; JW0806; supH" /db_xref="ECOCYC:G6425" /db_xref="EcoGene:EG13327" /db_xref="GeneID:945432" CDS complement(858436..859251) /gene="ybiV" /locus_tag="b0822" /gene_synonym="ECK0812; JW0806; supH" /codon_start=1 /transl_table=11 /product="sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P" /protein_id="NP_415343.1" /db_xref="GI:16128790" /db_xref="ASAP:ABE-0002807" /db_xref="UniProtKB/Swiss-Prot:P75792" /db_xref="ECOCYC:G6425" /db_xref="EcoGene:EG13327" /db_xref="GeneID:945432" /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVAS GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPL VIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS" gene complement(859397..861829) /gene="ybiW" /locus_tag="b0823" /gene_synonym="ECK0813; JW0807; pflF" /db_xref="ECOCYC:G6426" /db_xref="EcoGene:EG13328" /db_xref="GeneID:945444" CDS complement(859397..861829) /gene="ybiW" /locus_tag="b0823" /gene_synonym="ECK0813; JW0807; pflF" /function="putative enzyme; Not classified" /GO_process="GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="predicted pyruvate formate lyase" /protein_id="NP_415344.1" /db_xref="GI:16128791" /db_xref="ASAP:ABE-0002810" /db_xref="UniProtKB/Swiss-Prot:P75793" /db_xref="ECOCYC:G6426" /db_xref="EcoGene:EG13328" /db_xref="GeneID:945444" /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT SGDAHLAVNFPLLLEKGLDGLREEVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE HIERFAALAREMAATETRESRRDELLAMAENCDLIAHQPPQTFWQALQLCYFIQLILQ IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIEMLHSCWLKLLEVNKIRSGSH SKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW GYRCTGMSFINFARVMLAALEGGHDATSGKVFLPQEKALSAGNFNNFDEVMDAWDTQI RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK LMILLRTFFEVHKGWHIQYNIVSRETLLDAKKHPDQYRDLVVRVAGYSAFFTALSPDA QDDIIARTEHML" gene complement(861835..862734) /gene="ybiY" /locus_tag="b0824" /gene_synonym="ECK0814; JW0808; pflE" /db_xref="ECOCYC:G6427" /db_xref="EcoGene:EG13470" /db_xref="GeneID:945445" CDS complement(861835..862734) /gene="ybiY" /locus_tag="b0824" /gene_synonym="ECK0814; JW0808; pflE" /function="putative enzyme; Not classified" /GO_process="GO:0009061 - anaerobic respiration; GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="predicted pyruvate formate lyase activating enzyme" /protein_id="NP_415345.2" /db_xref="GI:226524704" /db_xref="ASAP:ABE-0002812" /db_xref="UniProtKB/Swiss-Prot:P75794" /db_xref="ECOCYC:G6427" /db_xref="EcoGene:EG13470" /db_xref="GeneID:945445" /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE VKSVEEIMTTVLRDKPFYDRSGGGLTLSGGEPFMQPEMAMALLQASHEAGIHTAVETC LHVPWKYIAPSLPYIDLFLADLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIR VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD APELLDFAQQYACQKGLTATLRG" gene 862865..863527 /gene="fsaA" /locus_tag="b0825" /gene_synonym="ECK0815; JW5109; mipB; ybiZ" /db_xref="ECOCYC:G6428" /db_xref="EcoGene:EG13471" /db_xref="GeneID:945449" CDS 862865..863527 /gene="fsaA" /locus_tag="b0825" /gene_synonym="ECK0815; JW5109; mipB; ybiZ" /EC_number="4.1.2.-" /note="fructose-6-phosphate aldolase" /codon_start=1 /transl_table=11 /product="fructose-6-phosphate aldolase 1" /protein_id="NP_415346.4" /db_xref="GI:90111174" /db_xref="ASAP:ABE-0002818" /db_xref="UniProtKB/Swiss-Prot:P78055" /db_xref="ECOCYC:G6428" /db_xref="EcoGene:EG13471" /db_xref="GeneID:945449" /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP QLHEAMGGQGRLFAQVMATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKMLKAE GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA KVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWQGAFGRT SI" mat_peptide 862868..863524 /gene="fsaA" /locus_tag="b0825" /gene_synonym="ECK0815; JW5109; mipB; ybiZ" /product="fructose-6-phosphate aldolase 1" /experiment="N-terminus verified by Edman degradation: PMID 11120740" repeat_region 863556..863593 /note="REP80 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(863603..864352) /gene="moeB" /locus_tag="b0826" /gene_synonym="chlN; ECK0816; JW0810" /db_xref="ECOCYC:EG10154" /db_xref="EcoGene:EG10154" /db_xref="GeneID:945452" CDS complement(863603..864352) /gene="moeB" /locus_tag="b0826" /gene_synonym="chlN; ECK0816; JW0810" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="molybdopterin biosynthesis" /codon_start=1 /transl_table=11 /product="molybdopterin synthase sulfurylase" /protein_id="NP_415347.1" /db_xref="GI:16128794" /db_xref="ASAP:ABE-0002820" /db_xref="UniProtKB/Swiss-Prot:P12282" /db_xref="ECOCYC:EG10154" /db_xref="EcoGene:EG10154" /db_xref="GeneID:945452" /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGC AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIA ITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKMLAGYGKP ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ" gene complement(864352..865587) /gene="moeA" /locus_tag="b0827" /gene_synonym="bisB; chlE; ECK0817; JW0811; narE" /db_xref="ECOCYC:EG10153" /db_xref="EcoGene:EG10153" /db_xref="GeneID:945454" CDS complement(864352..865587) /gene="moeA" /locus_tag="b0827" /gene_synonym="bisB; chlE; ECK0817; JW0811; narE" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /note="molybdopterin biosynthesis" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein" /protein_id="NP_415348.1" /db_xref="GI:16128795" /db_xref="ASAP:ABE-0002823" /db_xref="UniProtKB/Swiss-Prot:P12281" /db_xref="ECOCYC:EG10153" /db_xref="EcoGene:EG10153" /db_xref="GeneID:945454" /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV VSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA PVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN VEVGEWVEVEPFNALFGGL" gene 865791..866756 /gene="iaaA" /locus_tag="b0828" /gene_synonym="ECK0818; JW0812; spt; ybiK" /db_xref="ECOCYC:EG12407" /db_xref="EcoGene:EG12407" /db_xref="GeneID:945456" CDS 865791..866756 /gene="iaaA" /locus_tag="b0828" /gene_synonym="ECK0818; JW0812; spt; ybiK" /EC_number="3.5.1.1" /function="orf; Not classified" /GO_process="GO:0009063 - cellular amino acid catabolic process" /note="putative asparaginase" /codon_start=1 /transl_table=11 /product="Isoaspartyl peptidase" /protein_id="NP_415349.1" /db_xref="GI:16128796" /db_xref="ASAP:ABE-0002828" /db_xref="UniProtKB/Swiss-Prot:P37595" /db_xref="ECOCYC:EG12407" /db_xref="EcoGene:EG12407" /db_xref="GeneID:945456" /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEG ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG LIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ" gene 866743..868614 /gene="gsiA" /locus_tag="b0829" /gene_synonym="ECK0819; JW5897; yliA" /db_xref="ECOCYC:G6429" /db_xref="EcoGene:EG13472" /db_xref="GeneID:945457" CDS 866743..868614 /gene="gsiA" /locus_tag="b0829" /gene_synonym="ECK0819; JW5897; yliA" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="glutathione transporter ATP-binding protein, ABC superfamily" /protein_id="NP_415350.2" /db_xref="GI:145698235" /db_xref="ASAP:ABE-0002830" /db_xref="UniProtKB/Swiss-Prot:P75796" /db_xref="ECOCYC:G6429" /db_xref="EcoGene:EG13472" /db_xref="GeneID:945457" /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVR GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG AMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERV GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR" gene 868634..870172 /gene="gsiB" /locus_tag="b0830" /gene_synonym="ECK0820; JW5111; yliB" /db_xref="ECOCYC:G6430" /db_xref="EcoGene:EG13473" /db_xref="GeneID:945459" CDS 868634..870172 /gene="gsiB" /locus_tag="b0830" /gene_synonym="ECK0820; JW5111; yliB" /function="putative transport; Not classified" /GO_component="GO:0042597 - periplasmic space" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="glutathione periplasmic binding protein, ABC superfamily transporter" /protein_id="NP_415351.1" /db_xref="GI:16128798" /db_xref="ASAP:ABE-0002832" /db_xref="UniProtKB/Swiss-Prot:P75797" /db_xref="ECOCYC:G6430" /db_xref="EcoGene:EG13473" /db_xref="GeneID:945459" /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAH PATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI TWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVT QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED ADLQ" gene 870190..871110 /gene="gsiC" /locus_tag="b0831" /gene_synonym="ECK0821; JW0815; yliC" /db_xref="ECOCYC:G6431" /db_xref="EcoGene:EG13474" /db_xref="GeneID:945460" CDS 870190..871110 /gene="gsiC" /locus_tag="b0831" /gene_synonym="ECK0821; JW0815; yliC" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane" /note="putative transport system permease protein" /codon_start=1 /transl_table=11 /product="glutathione transporter, permease component, ABC superfamily" /protein_id="NP_415352.1" /db_xref="GI:16128799" /db_xref="ASAP:ABE-0002834" /db_xref="UniProtKB/Swiss-Prot:P75798" /db_xref="ECOCYC:G6431" /db_xref="EcoGene:EG13474" /db_xref="GeneID:945460" /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG WLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA EILLFSLEFILINLVVDVLYAAINPAIRYK" gene 871113..872024 /gene="gsiD" /locus_tag="b0832" /gene_synonym="ECK0822; JW0816; yliD" /db_xref="ECOCYC:G6432" /db_xref="EcoGene:EG13475" /db_xref="GeneID:945461" CDS 871113..872024 /gene="gsiD" /locus_tag="b0832" /gene_synonym="ECK0822; JW0816; yliD" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport system permease protein" /codon_start=1 /transl_table=11 /product="glutathione transporter, permease component, ABC superfamily" /protein_id="NP_415353.1" /db_xref="GI:16128800" /db_xref="ASAP:ABE-0002836" /db_xref="UniProtKB/Swiss-Prot:P75799" /db_xref="ECOCYC:G6432" /db_xref="EcoGene:EG13475" /db_xref="GeneID:945461" /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLLRHILPGT VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA LAIFLTVLAFNLLGDGLRDALDPKIKG" gene 872202..874550 /gene="yliE" /locus_tag="b0833" /gene_synonym="ECK0823; JW0817" /db_xref="ECOCYC:G6433" /db_xref="EcoGene:EG13476" /db_xref="GeneID:945462" CDS 872202..874550 /gene="yliE" /locus_tag="b0833" /gene_synonym="ECK0823; JW0817" /codon_start=1 /transl_table=11 /product="predicted cyclic-di-GMP phosphodiesterase, inner membrane protein" /protein_id="NP_415354.1" /db_xref="GI:16128801" /db_xref="ASAP:ABE-0002839" /db_xref="UniProtKB/Swiss-Prot:P75800" /db_xref="ECOCYC:G6433" /db_xref="EcoGene:EG13476" /db_xref="GeneID:945462" /translation="MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRAD SRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVL DDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSW NPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLF LKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPG GNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIE ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAE GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE" gene 874558..875886 /gene="yliF" /locus_tag="b0834" /gene_synonym="ECK0824; JW0818" /db_xref="ECOCYC:G6434" /db_xref="EcoGene:EG13477" /db_xref="GeneID:945463" CDS 874558..875886 /gene="yliF" /locus_tag="b0834" /gene_synonym="ECK0824; JW0818" /codon_start=1 /transl_table=11 /product="predicted diguanylate cyclase" /protein_id="NP_415355.1" /db_xref="GI:16128802" /db_xref="ASAP:ABE-0002841" /db_xref="UniProtKB/Swiss-Prot:P75801" /db_xref="ECOCYC:G6434" /db_xref="EcoGene:EG13477" /db_xref="GeneID:945463" /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNI NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ" gene complement(875933..877258) /gene="rimO" /locus_tag="b0835" /gene_synonym="ECK0825; JW0819; yliG" /db_xref="ECOCYC:G6435" /db_xref="EcoGene:EG13478" /db_xref="GeneID:945465" CDS complement(875933..877258) /gene="rimO" /locus_tag="b0835" /gene_synonym="ECK0825; JW0819; yliG" /codon_start=1 /transl_table=11 /product="ribosomal protein S12 methylthiotransferase; radical SAM superfamily" /protein_id="NP_415356.1" /db_xref="GI:16128803" /db_xref="ASAP:ABE-0002843" /db_xref="UniProtKB/Swiss-Prot:P0AEI4" /db_xref="ECOCYC:G6435" /db_xref="EcoGene:EG13478" /db_xref="GeneID:945465" /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV" gene 877471..877854 /gene="bssR" /locus_tag="b0836" /gene_synonym="ECK0826; JW0820; yliH" /db_xref="ECOCYC:G6436" /db_xref="EcoGene:EG13479" /db_xref="GeneID:945466" CDS 877471..877854 /gene="bssR" /locus_tag="b0836" /gene_synonym="ECK0826; JW0820; yliH" /function="putative factor; Not classified" /note="putative receptor" /codon_start=1 /transl_table=11 /product="repressor of biofilm formation by indole transport regulation" /protein_id="NP_415357.1" /db_xref="GI:16128804" /db_xref="ASAP:ABE-0002849" /db_xref="UniProtKB/Swiss-Prot:P0AAY1" /db_xref="ECOCYC:G6436" /db_xref="EcoGene:EG13479" /db_xref="GeneID:945466" /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD KLENCLMSLTLSIQSLQKHAMLEKA" gene 877965..879080 /gene="yliI" /locus_tag="b0837" /gene_synonym="ECK0827; JW0821" /db_xref="ECOCYC:G6437" /db_xref="EcoGene:EG13480" /db_xref="GeneID:945467" CDS 877965..879080 /gene="yliI" /locus_tag="b0837" /gene_synonym="ECK0827; JW0821" /function="putative enzyme; Not classified" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="soluble aldose sugar dehydrogenase" /protein_id="NP_415358.1" /db_xref="GI:16128805" /db_xref="ASAP:ABE-0002852" /db_xref="UniProtKB/Swiss-Prot:P75804" /db_xref="ECOCYC:G6437" /db_xref="EcoGene:EG13480" /db_xref="GeneID:945467" /translation="MHRQSFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLP DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWL SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYL FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQG MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAG TEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI LTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSPRN" gene complement(879077..879703) /gene="yliJ" /locus_tag="b0838" /gene_synonym="ECK0828; JW0822" /db_xref="ECOCYC:G6438" /db_xref="EcoGene:EG13481" /db_xref="GeneID:945469" CDS complement(879077..879703) /gene="yliJ" /locus_tag="b0838" /gene_synonym="ECK0828; JW0822" /function="putative enzyme; Not classified" /note="putative transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase homolog" /protein_id="NP_415359.4" /db_xref="GI:90111175" /db_xref="ASAP:ABE-0002855" /db_xref="UniProtKB/Swiss-Prot:P0ACA7" /db_xref="ECOCYC:G6438" /db_xref="EcoGene:EG13481" /db_xref="GeneID:945469" /translation="MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADF LAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWA NQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFG VGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS" gene 879950..881152 /gene="dacC" /locus_tag="b0839" /gene_synonym="ECK0829; JW0823" /db_xref="ECOCYC:EG10203" /db_xref="EcoGene:EG10203" /db_xref="GeneID:945455" CDS 879950..881152 /gene="dacC" /locus_tag="b0839" /gene_synonym="ECK0829; JW0823" /EC_number="3.4.16.4" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0042493 - response to drug" /note="D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)" /protein_id="NP_415360.1" /db_xref="GI:16128807" /db_xref="ASAP:ABE-0002860" /db_xref="UniProtKB/Swiss-Prot:P08506" /db_xref="ECOCYC:EG10203" /db_xref="EcoGene:EG10203" /db_xref="GeneID:945455" /translation="MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWIL MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGN PALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAK KLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQP NRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK LLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASY TLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRVWDFVMMKFH QWFGSWFS" mat_peptide 880031..881149 /gene="dacC" /locus_tag="b0839" /gene_synonym="ECK0829; JW0823" /product="D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)" /experiment="N-terminus verified by Edman degradation: PMID 7042389" repeat_region 881163..881189 /note="REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(881199..881957) /gene="deoR" /locus_tag="b0840" /gene_synonym="ECK0830; JW0824; nucR" /db_xref="ECOCYC:EG10223" /db_xref="EcoGene:EG10223" /db_xref="GeneID:945453" CDS complement(881199..881957) /gene="deoR" /locus_tag="b0840" /gene_synonym="ECK0830; JW0824; nucR" /function="regulator; Salvage of nucleosides and nucleotides" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO:0006350 - transcription" /note="transcriptional repressor for deo operon, tsx, nupG" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor" /protein_id="NP_415361.1" /db_xref="GI:16128808" /db_xref="ASAP:ABE-0002862" /db_xref="UniProtKB/Swiss-Prot:P0ACK5" /db_xref="ECOCYC:EG10223" /db_xref="EcoGene:EG10223" /db_xref="GeneID:945453" /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN HSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA RMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKLMY" gene complement(882015..882611) /gene="ybjG" /locus_tag="b0841" /gene_synonym="bcrC; ECK0831; JW5112" /db_xref="ECOCYC:G6439" /db_xref="EcoGene:EG13676" /db_xref="GeneID:945450" CDS complement(882015..882611) /gene="ybjG" /locus_tag="b0841" /gene_synonym="bcrC; ECK0831; JW5112" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate phosphatase" /protein_id="NP_415362.1" /db_xref="GI:16128809" /db_xref="ASAP:ABE-0002865" /db_xref="UniProtKB/Swiss-Prot:P75806" /db_xref="ECOCYC:G6439" /db_xref="EcoGene:EG13676" /db_xref="GeneID:945450" /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVV LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG CLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD" gene 882896..884128 /gene="mdfA" /locus_tag="b0842" /gene_synonym="cmlA; cmr; ECK0832; JW0826" /db_xref="ECOCYC:G6440" /db_xref="EcoGene:EG13696" /db_xref="GeneID:945448" CDS 882896..884128 /gene="mdfA" /locus_tag="b0842" /gene_synonym="cmlA; cmr; ECK0832; JW0826" /function="transport; Transport of small molecules: Other" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0042493 - response to drug" /note="proton motive force efflux pump" /codon_start=1 /transl_table=11 /product="multidrug efflux system protein" /protein_id="NP_415363.1" /db_xref="GI:16128810" /db_xref="ASAP:ABE-0002871" /db_xref="UniProtKB/Swiss-Prot:P0AEY8" /db_xref="ECOCYC:G6440" /db_xref="EcoGene:EG13696" /db_xref="GeneID:945448" /translation="MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVV EQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLA QNIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLV GAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKN GRFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLA RLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGL VRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWL SLMVIFLKDKQMGNSHEG" gene complement(884169..884453) /gene="ybjH" /locus_tag="b0843" /gene_synonym="ECK0833; JW0827" /db_xref="ECOCYC:G6441" /db_xref="EcoGene:EG13677" /db_xref="GeneID:945447" CDS complement(884169..884453) /gene="ybjH" /locus_tag="b0843" /gene_synonym="ECK0833; JW0827" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415364.1" /db_xref="GI:16128811" /db_xref="ASAP:ABE-0002873" /db_xref="UniProtKB/Swiss-Prot:P0AAY4" /db_xref="ECOCYC:G6441" /db_xref="EcoGene:EG13677" /db_xref="GeneID:945447" /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV PQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH" gene complement(884539..885354) /gene="ybjI" /locus_tag="b0844" /gene_synonym="ECK0834; JW5113" /db_xref="ECOCYC:G6442" /db_xref="EcoGene:EG13678" /db_xref="GeneID:945470" CDS complement(884539..885354) /gene="ybjI" /locus_tag="b0844" /gene_synonym="ECK0834; JW5113" /codon_start=1 /transl_table=11 /product="FMN and erythrose-4-P phosphatase" /protein_id="NP_415365.4" /db_xref="GI:90111176" /db_xref="ASAP:ABE-0002877" /db_xref="UniProtKB/Swiss-Prot:P75809" /db_xref="ECOCYC:G6442" /db_xref="EcoGene:EG13678" /db_xref="GeneID:945470" /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFATVVEHLLTRPEV EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ VQKALHEAIGDIMVSVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGN DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ" gene complement(885354..886562) /gene="ybjJ" /locus_tag="b0845" /gene_synonym="ECK0835; JW0829" /db_xref="ECOCYC:G6443" /db_xref="EcoGene:EG13679" /db_xref="GeneID:945471" CDS complement(885354..886562) /gene="ybjJ" /locus_tag="b0845" /gene_synonym="ECK0835; JW0829" /function="putative regulator; Not classified" /note="putative DEOR-type transcriptional regulator" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415366.1" /db_xref="GI:16128813" /db_xref="ASAP:ABE-0002880" /db_xref="UniProtKB/Swiss-Prot:P75810" /db_xref="ECOCYC:G6443" /db_xref="EcoGene:EG13679" /db_xref="GeneID:945471" /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGVPFYRDIQLL LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD TKTQTAMENS" gene 886646..887182 /gene="ybjK" /locus_tag="b0846" /gene_synonym="ECK0836; JW5114" /db_xref="ECOCYC:G6444" /db_xref="EcoGene:EG13680" /db_xref="GeneID:945473" CDS 886646..887182 /gene="ybjK" /locus_tag="b0846" /gene_synonym="ECK0836; JW5114" /function="putative regulator; Not classified" /note="putative DEOR-type transcriptional regulator" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415367.1" /db_xref="GI:16128814" /db_xref="ASAP:ABE-0002885" /db_xref="UniProtKB/Swiss-Prot:P75811" /db_xref="ECOCYC:G6444" /db_xref="EcoGene:EG13680" /db_xref="GeneID:945473" /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDN MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD RKPLSREEILRMVERVAG" gene complement(887199..887277) /gene="rybB" /locus_tag="b4417" /gene_synonym="ECK0837; JWR0227; p25" /db_xref="ECOCYC:G0-8880" /db_xref="EcoGene:EG31137" /db_xref="GeneID:2847774" ncRNA complement(887199..887277) /gene="rybB" /locus_tag="b4417" /gene_synonym="ECK0837; JWR0227; p25" /ncRNA_class="antisense_RNA" /product="sRNA antisense regulator of ompC and ompW mRNA instability, Hfq-dependent" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047241" /db_xref="ECOCYC:G0-8880" /db_xref="EcoGene:EG31137" /db_xref="GeneID:2847774" gene complement(887357..889042) /gene="ybjL" /locus_tag="b0847" /gene_synonym="ECK0838; JW0831" /db_xref="ECOCYC:G6445" /db_xref="EcoGene:EG13681" /db_xref="GeneID:945474" CDS complement(887357..889042) /gene="ybjL" /locus_tag="b0847" /gene_synonym="ECK0838; JW0831" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415368.1" /db_xref="GI:16128815" /db_xref="ASAP:ABE-0002887" /db_xref="UniProtKB/Swiss-Prot:P60869" /db_xref="ECOCYC:G6445" /db_xref="EcoGene:EG13681" /db_xref="GeneID:945474" /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG" gene 889312..889689 /gene="ybjM" /locus_tag="b0848" /gene_synonym="ECK0839; JW0832" /db_xref="ECOCYC:G6446" /db_xref="EcoGene:EG13682" /db_xref="GeneID:945477" CDS 889312..889689 /gene="ybjM" /locus_tag="b0848" /gene_synonym="ECK0839; JW0832" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="NP_415369.1" /db_xref="GI:16128816" /db_xref="ASAP:ABE-0002891" /db_xref="UniProtKB/Swiss-Prot:P64439" /db_xref="ECOCYC:G6446" /db_xref="EcoGene:EG13682" /db_xref="GeneID:945477" /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW CALGALCFLFISSLFKPQHRKNQ" gene complement(889719..889976) /gene="grxA" /locus_tag="b0849" /gene_synonym="ECK0840; grx; JW0833" /db_xref="ECOCYC:EG10417" /db_xref="EcoGene:EG10417" /db_xref="GeneID:945479" CDS complement(889719..889976) /gene="grxA" /locus_tag="b0849" /gene_synonym="ECK0840; grx; JW0833" /function="carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /experiment="N-terminus verified by Edman degradation: PMID 6352262" /note="glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase" /codon_start=1 /transl_table=11 /product="glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a)" /protein_id="NP_415370.1" /db_xref="GI:16128817" /db_xref="ASAP:ABE-0002893" /db_xref="UniProtKB/Swiss-Prot:P68688" /db_xref="ECOCYC:EG10417" /db_xref="EcoGene:EG10417" /db_xref="GeneID:945479" /translation="MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA" gene 890136..890423 /gene="ybjC" /locus_tag="b0850" /gene_synonym="ECK0841; JW0834" /db_xref="ECOCYC:EG12842" /db_xref="EcoGene:EG12842" /db_xref="GeneID:945481" CDS 890136..890423 /gene="ybjC" /locus_tag="b0850" /gene_synonym="ECK0841; JW0834" /codon_start=1 /transl_table=11 /product="conserved protein, DUF1418 family" /protein_id="NP_415371.1" /db_xref="GI:16128818" /db_xref="ASAP:ABE-0002898" /db_xref="UniProtKB/Swiss-Prot:P46119" /db_xref="ECOCYC:EG12842" /db_xref="EcoGene:EG12842" /db_xref="GeneID:945481" /translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH" gene 890407..891129 /gene="nfsA" /locus_tag="b0851" /gene_synonym="ECK0842; JW0835; mda18; mdaA; snrA; ybjB" /db_xref="ECOCYC:EG11261" /db_xref="EcoGene:EG11261" /db_xref="GeneID:945483" CDS 890407..891129 /gene="nfsA" /locus_tag="b0851" /gene_synonym="ECK0842; JW0835; mda18; mdaA; snrA; ybjB" /EC_number="1.-.-.-" /function="phenotype; Not classified" /GO_process="GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitroreductase A, NADPH-dependent, FMN-dependent" /protein_id="NP_415372.1" /db_xref="GI:16128819" /db_xref="ASAP:ABE-0002900" /db_xref="UniProtKB/Swiss-Prot:P17117" /db_xref="ECOCYC:EG11261" /db_xref="EcoGene:EG11261" /db_xref="GeneID:945483" /translation="MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQ CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL LGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP ADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR TIIKESRPFILDYLHKQGWATR" gene 891190..892092 /gene="rimK" /locus_tag="b0852" /gene_synonym="ECK0843; JW0836; nek" /db_xref="ECOCYC:EG10852" /db_xref="EcoGene:EG10852" /db_xref="GeneID:945484" CDS 891190..892092 /gene="rimK" /locus_tag="b0852" /gene_synonym="ECK0843; JW0836; nek" /function="structural component; Ribosomes - maturation and modification" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0003735 - structural constituent of ribosome" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="ribosomal protein S6 modification protein" /protein_id="NP_415373.1" /db_xref="GI:16128820" /db_xref="ASAP:ABE-0002903" /db_xref="UniProtKB/Swiss-Prot:P0C0U4" /db_xref="ECOCYC:EG10852" /db_xref="EcoGene:EG10852" /db_xref="GeneID:945484" /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI DIAGKMIRWIERHATTEYCLKTGG" gene 892180..892656 /gene="ybjN" /locus_tag="b0853" /gene_synonym="ECK0844; JW0837" /db_xref="ECOCYC:G6447" /db_xref="EcoGene:EG13683" /db_xref="GeneID:945482" CDS 892180..892656 /gene="ybjN" /locus_tag="b0853" /gene_synonym="ECK0844; JW0837" /function="putative regulator; Not classified" /note="putative sensory transduction regulator" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase" /protein_id="NP_415374.1" /db_xref="GI:16128821" /db_xref="ASAP:ABE-0002910" /db_xref="UniProtKB/Swiss-Prot:P0AAY6" /db_xref="ECOCYC:G6447" /db_xref="EcoGene:EG13683" /db_xref="GeneID:945482" /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH" gene 893007..894119 /gene="potF" /locus_tag="b0854" /gene_synonym="ECK0845; JW0838" /db_xref="ECOCYC:EG11629" /db_xref="EcoGene:EG11629" /db_xref="GeneID:945480" CDS 893007..894119 /gene="potF" /locus_tag="b0854" /gene_synonym="ECK0845; JW0838" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process; GO:0015847 - putrescine transport" /note="periplasmic putrescine-binding protein; permease protein" /codon_start=1 /transl_table=11 /product="putrescine transporter subunit: periplasmic-binding component of ABC superfamily" /protein_id="NP_415375.1" /db_xref="GI:16128822" /db_xref="ASAP:ABE-0002913" /db_xref="UniProtKB/Swiss-Prot:P31133" /db_xref="ECOCYC:EG11629" /db_xref="EcoGene:EG11629" /db_xref="GeneID:945480" /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK" mat_peptide 893085..894116 /gene="potF" /locus_tag="b0854" /gene_synonym="ECK0845; JW0838" /product="putrescine transporter subunit: periplasmic-binding component of ABC superfamily" /experiment="N-terminus verified by Edman degradation: PMID 8416922,9298646" gene 894214..895347 /gene="potG" /locus_tag="b0855" /gene_synonym="ECK0846; JW5818" /db_xref="ECOCYC:EG11630" /db_xref="EcoGene:EG11630" /db_xref="GeneID:945476" CDS 894214..895347 /gene="potG" /locus_tag="b0855" /gene_synonym="ECK0846; JW5818" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process; GO:0015847 - putrescine transport" /note="ATP-binding component of putrescine transport system" /codon_start=1 /transl_table=11 /product="putrescine transporter subunit: ATP-binding component of ABC superfamily" /protein_id="NP_415376.4" /db_xref="GI:90111177" /db_xref="ASAP:ABE-0002915" /db_xref="UniProtKB/Swiss-Prot:P31134" /db_xref="ECOCYC:EG11630" /db_xref="EcoGene:EG11630" /db_xref="GeneID:945476" /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK GEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL FPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVAL ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERQEDGLVLDSPGLV HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV" gene 895357..896310 /gene="potH" /locus_tag="b0856" /gene_synonym="ECK0847; JW0840" /db_xref="ECOCYC:EG11631" /db_xref="EcoGene:EG11631" /db_xref="GeneID:945475" CDS 895357..896310 /gene="potH" /locus_tag="b0856" /gene_synonym="ECK0847; JW0840" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process; GO:0015847 - putrescine transport" /note="putrescine transport protein; permease" /codon_start=1 /transl_table=11 /product="putrescine transporter subunit: membrane component of ABC superfamily" /protein_id="NP_415377.1" /db_xref="GI:16128824" /db_xref="ASAP:ABE-0002917" /db_xref="UniProtKB/Swiss-Prot:P31135" /db_xref="ECOCYC:EG11631" /db_xref="EcoGene:EG11631" /db_xref="GeneID:945475" /translation="MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ EFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG" gene 896307..897152 /gene="potI" /locus_tag="b0857" /gene_synonym="ECK0848; JW0841" /db_xref="ECOCYC:EG11632" /db_xref="EcoGene:EG11632" /db_xref="GeneID:945485" CDS 896307..897152 /gene="potI" /locus_tag="b0857" /gene_synonym="ECK0848; JW0841" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process; GO:0015847 - putrescine transport" /note="putrescine transport protein; permease" /codon_start=1 /transl_table=11 /product="putrescine transporter subunit: membrane component of ABC superfamily" /protein_id="NP_415378.1" /db_xref="GI:16128825" /db_xref="ASAP:ABE-0002919" /db_xref="UniProtKB/Swiss-Prot:P0AFL1" /db_xref="ECOCYC:EG11632" /db_xref="EcoGene:EG11632" /db_xref="GeneID:945485" /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ RARRG" gene 897212..897700 /gene="ybjO" /locus_tag="b0858" /gene_synonym="ECK0849; JW0842" /db_xref="ECOCYC:G6448" /db_xref="EcoGene:EG13684" /db_xref="GeneID:945488" CDS 897212..897700 /gene="ybjO" /locus_tag="b0858" /gene_synonym="ECK0849; JW0842" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF2593 family" /protein_id="NP_415379.1" /db_xref="GI:16128826" /db_xref="ASAP:ABE-0002922" /db_xref="UniProtKB/Swiss-Prot:P0AAZ0" /db_xref="ECOCYC:G6448" /db_xref="EcoGene:EG13684" /db_xref="GeneID:945488" /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ LQ" gene 897741..898868 /gene="rumB" /locus_tag="b0859" /gene_synonym="ECK0850; JW0843; ybjF" /db_xref="ECOCYC:G6449" /db_xref="EcoGene:EG13427" /db_xref="GeneID:947260" CDS 897741..898868 /gene="rumB" /locus_tag="b0859" /gene_synonym="ECK0850; JW0843; ybjF" /EC_number="2.1.1.-" /function="enzyme: rRNA modification" /GO_process="GO:0009451 - RNA modification" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="23S rRNA m(5)U747 methyltransferase" /protein_id="NP_415380.1" /db_xref="GI:16128827" /db_xref="ASAP:ABE-0002924" /db_xref="UniProtKB/Swiss-Prot:P75817" /db_xref="ECOCYC:G6449" /db_xref="EcoGene:EG13427" /db_xref="GeneID:947260" /translation="MQCALYDAGRCRSCQWIMQPIPEQLSAKTADLKNLLADFPVEEW CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLHE QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAA ELGLTRLQFQALDSTQFATAQGDVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC NAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQ" repeat_region 898919..899016 /note="RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(899067..899798) /gene="artJ" /locus_tag="b0860" /gene_synonym="ECK0851; JW0844" /db_xref="ECOCYC:EG11628" /db_xref="EcoGene:EG11628" /db_xref="GeneID:948981" CDS complement(899067..899798) /gene="artJ" /locus_tag="b0860" /gene_synonym="ECK0851; JW0844" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006526 - arginine biosynthetic process" /note="arginine 3rd transport system periplasmic binding protein" /codon_start=1 /transl_table=11 /product="arginine transporter subunit" /protein_id="NP_415381.1" /db_xref="GI:16128828" /db_xref="ASAP:ABE-0002927" /db_xref="UniProtKB/Swiss-Prot:P30860" /db_xref="ECOCYC:EG11628" /db_xref="EcoGene:EG11628" /db_xref="GeneID:948981" /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE KLNNALAAIKADGTYQKISDQWFPQ" mat_peptide complement(899070..899741) /gene="artJ" /locus_tag="b0860" /gene_synonym="ECK0851; JW0844" /product="arginine transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 8801422,9298646,9600841" repeat_region 899972..900058 /note="REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(900089..900757) /gene="artM" /locus_tag="b0861" /gene_synonym="ECK0852; JW0845" /db_xref="ECOCYC:EG11627" /db_xref="EcoGene:EG11627" /db_xref="GeneID:949066" CDS complement(900089..900757) /gene="artM" /locus_tag="b0861" /gene_synonym="ECK0852; JW0845" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006526 - arginine biosynthetic process; GO:0009063 - cellular amino acid catabolic process" /note="arginine 3rd transport system permease protein; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="arginine transporter subunit" /protein_id="NP_415382.1" /db_xref="GI:16128829" /db_xref="ASAP:ABE-0002931" /db_xref="UniProtKB/Swiss-Prot:P0AE30" /db_xref="ECOCYC:EG11627" /db_xref="EcoGene:EG11627" /db_xref="GeneID:949066" /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF ERRN" gene complement(900757..901473) /gene="artQ" /locus_tag="b0862" /gene_synonym="ECK0853; JW0846" /db_xref="ECOCYC:EG11626" /db_xref="EcoGene:EG11626" /db_xref="GeneID:949046" CDS complement(900757..901473) /gene="artQ" /locus_tag="b0862" /gene_synonym="ECK0853; JW0846" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006526 - arginine biosynthetic process" /note="arginine 3rd transport system permease protein; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="arginine transporter subunit" /protein_id="NP_415383.1" /db_xref="GI:16128830" /db_xref="ASAP:ABE-0002933" /db_xref="UniProtKB/Swiss-Prot:P0AE34" /db_xref="ECOCYC:EG11626" /db_xref="EcoGene:EG11626" /db_xref="GeneID:949046" /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVA WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL SQYILKRIDLRATRFERRPS" gene complement(901480..902211) /gene="artI" /locus_tag="b0863" /gene_synonym="ECK0854; JW0847" /db_xref="ECOCYC:EG11625" /db_xref="EcoGene:EG11625" /db_xref="GeneID:948988" CDS complement(901480..902211) /gene="artI" /locus_tag="b0863" /gene_synonym="ECK0854; JW0847" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006542 - glutamine biosynthetic process" /note="arginine 3rd transport system periplasmic binding protein" /codon_start=1 /transl_table=11 /product="arginine transporter subunit" /protein_id="NP_415384.1" /db_xref="GI:16128831" /db_xref="ASAP:ABE-0002937" /db_xref="UniProtKB/Swiss-Prot:P30859" /db_xref="ECOCYC:EG11625" /db_xref="EcoGene:EG11625" /db_xref="GeneID:948988" /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ KLNTALEKVKKDGTYETIYNKWFQK" mat_peptide complement(901483..902154) /gene="artI" /locus_tag="b0863" /gene_synonym="ECK0854; JW0847" /product="arginine transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 8801422,9298646,9600841,9740056" gene complement(902229..902957) /gene="artP" /locus_tag="b0864" /gene_synonym="ECK0855; JW0848" /db_xref="ECOCYC:EG11624" /db_xref="EcoGene:EG11624" /db_xref="GeneID:945489" CDS complement(902229..902957) /gene="artP" /locus_tag="b0864" /gene_synonym="ECK0855; JW0848" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006526 - arginine biosynthetic process" /note="ATP-binding component of 3rd arginine transport system" /codon_start=1 /transl_table=11 /product="arginine transporter subunit" /protein_id="NP_415385.1" /db_xref="GI:16128832" /db_xref="ASAP:ABE-0002939" /db_xref="UniProtKB/Swiss-Prot:P0AAF6" /db_xref="ECOCYC:EG11624" /db_xref="EcoGene:EG11624" /db_xref="GeneID:945489" /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH IVEQGDASCFTEPQTEAFKNYLSH" gene complement(903175..903690) /gene="ybjP" /locus_tag="b0865" /gene_synonym="ECK0856; JW0849" /db_xref="ECOCYC:G6450" /db_xref="EcoGene:EG13685" /db_xref="GeneID:945491" CDS complement(903175..903690) /gene="ybjP" /locus_tag="b0865" /gene_synonym="ECK0856; JW0849" /function="putative enzyme; Not classified" /note="putative lipoprotein" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="NP_415386.1" /db_xref="GI:16128833" /db_xref="ASAP:ABE-0002941" /db_xref="UniProtKB/Swiss-Prot:P75818" /db_xref="ECOCYC:G6450" /db_xref="EcoGene:EG13685" /db_xref="GeneID:945491" /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNV AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDS AHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHAT AGTLRQSIENR" gene 903816..904139 /gene="ybjQ" /locus_tag="b0866" /gene_synonym="ECK0857; JW0850" /db_xref="ECOCYC:G6451" /db_xref="EcoGene:EG13686" /db_xref="GeneID:945493" CDS 903816..904139 /gene="ybjQ" /locus_tag="b0866" /gene_synonym="ECK0857; JW0850" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0145 family" /protein_id="NP_415387.1" /db_xref="GI:16128834" /db_xref="ASAP:ABE-0002945" /db_xref="UniProtKB/Swiss-Prot:P0A8C1" /db_xref="ECOCYC:G6451" /db_xref="EcoGene:EG13686" /db_xref="GeneID:945493" /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA VKTRR" gene 904136..904966 /gene="amiD" /locus_tag="b0867" /gene_synonym="ECK0858; JW0851; ybjR" /db_xref="ECOCYC:G6452" /db_xref="EcoGene:EG13687" /db_xref="GeneID:945494" CDS 904136..904966 /gene="amiD" /locus_tag="b0867" /gene_synonym="ECK0858; JW0851; ybjR" /function="putative regulator; Not classified" /codon_start=1 /transl_table=11 /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein" /protein_id="NP_415388.1" /db_xref="GI:16128835" /db_xref="ASAP:ABE-0002947" /db_xref="UniProtKB/Swiss-Prot:P75820" /db_xref="ECOCYC:G6452" /db_xref="EcoGene:EG13687" /db_xref="GeneID:945494" /translation="MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD" gene complement(904963..905976) /gene="ybjS" /locus_tag="b0868" /gene_synonym="ECK0859; JW5819" /db_xref="ECOCYC:G6453" /db_xref="EcoGene:EG13688" /db_xref="GeneID:945495" CDS complement(904963..905976) /gene="ybjS" /locus_tag="b0868" /gene_synonym="ECK0859; JW5819" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="predicted NAD(P)H-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415389.2" /db_xref="GI:90111178" /db_xref="ASAP:ABE-0002949" /db_xref="UniProtKB/Swiss-Prot:P75821" /db_xref="ECOCYC:G6453" /db_xref="EcoGene:EG13688" /db_xref="GeneID:945495" /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQ TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA SQEACDKLPSGRVYNITNGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER LGRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGK LPR" gene complement(906075..907505) /gene="ybjT" /locus_tag="b0869" /gene_synonym="ECK0860; JW5116" /db_xref="ECOCYC:G6454" /db_xref="EcoGene:EG13689" /db_xref="GeneID:945496" CDS complement(906075..907505) /gene="ybjT" /locus_tag="b0869" /gene_synonym="ECK0860; JW5116" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="conserved protein with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415390.4" /db_xref="GI:90111179" /db_xref="ASAP:ABE-0002951" /db_xref="UniProtKB/Swiss-Prot:P75822" /db_xref="ECOCYC:G6454" /db_xref="EcoGene:EG13689" /db_xref="GeneID:945496" /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL LMIPAHLFIFRGMAKQIARLAEQSTD" gene complement(907516..908517) /gene="ltaE" /locus_tag="b0870" /gene_synonym="ECK0861; JW0854; ltaA; ybjU" /db_xref="ECOCYC:G6455" /db_xref="EcoGene:EG13690" /db_xref="GeneID:944955" CDS complement(907516..908517) /gene="ltaE" /locus_tag="b0870" /gene_synonym="ECK0861; JW0854; ltaA; ybjU" /EC_number="4.1.2.5" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9692922" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006545 - glycine biosynthetic process" /codon_start=1 /transl_table=11 /product="L-allo-threonine aldolase, PLP-dependent" /protein_id="NP_415391.1" /db_xref="GI:16128838" /db_xref="ASAP:ABE-0002954" /db_xref="UniProtKB/Swiss-Prot:P75823" /db_xref="ECOCYC:G6455" /db_xref="EcoGene:EG13690" /db_xref="GeneID:944955" /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI RWRKMTGGGMRQSGILAAAGIYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN MLFVRVGEENAAALGEYMKARNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR" gene complement(908554..910272) /gene="poxB" /locus_tag="b0871" /gene_synonym="ECK0862; JW0855" /db_xref="ECOCYC:EG10754" /db_xref="EcoGene:EG10754" /db_xref="GeneID:946132" CDS complement(908554..910272) /gene="poxB" /locus_tag="b0871" /gene_synonym="ECK0862; JW0855" /EC_number="1.2.2.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 3902830" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0042867 - pyruvate catabolic process" /note="pyruvate oxidase" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding" /protein_id="NP_415392.1" /db_xref="GI:16128839" /db_xref="ASAP:ABE-0002958" /db_xref="UniProtKB/Swiss-Prot:P07003" /db_xref="ECOCYC:EG10754" /db_xref="EcoGene:EG10754" /db_xref="GeneID:946132" /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP GDVALKPAPEGATMHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDK ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA KTNWLR" repeat_region 910370..910395 /note="REP84 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(910405..911373) /gene="hcr" /locus_tag="b0872" /gene_synonym="ECK0863; JW5117; ybjV" /db_xref="ECOCYC:G6456" /db_xref="EcoGene:EG13691" /db_xref="GeneID:947660" CDS complement(910405..911373) /gene="hcr" /locus_tag="b0872" /gene_synonym="ECK0863; JW5117; ybjV" /EC_number="1.-.-.-" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="HCP oxidoreductase, NADH-dependent" /protein_id="NP_415393.1" /db_xref="GI:16128840" /db_xref="ASAP:ABE-0002960" /db_xref="UniProtKB/Swiss-Prot:P75824" /db_xref="ECOCYC:G6456" /db_xref="EcoGene:EG13691" /db_xref="GeneID:947660" /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEW RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG VTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA" gene complement(911385..913037) /gene="hcp" /locus_tag="b0873" /gene_synonym="ECK0864; JW0857; ybjW" /db_xref="ECOCYC:G6457" /db_xref="EcoGene:EG13692" /db_xref="GeneID:946592" CDS complement(911385..913037) /gene="hcp" /locus_tag="b0873" /gene_synonym="ECK0864; JW0857; ybjW" /function="orf; Not classified" /codon_start=1 /transl_table=11 /product="hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases" /protein_id="NP_415394.4" /db_xref="GI:90111180" /db_xref="ASAP:ABE-0002962" /db_xref="UniProtKB/Swiss-Prot:P75825" /db_xref="ECOCYC:G6457" /db_xref="EcoGene:EG13692" /db_xref="GeneID:946592" /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRS IVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS REKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLP RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA" gene complement(913181..914080) /gene="ybjE" /locus_tag="b0874" /gene_synonym="ECK0865; JW0858" /db_xref="ECOCYC:G6458" /db_xref="EcoGene:EG13426" /db_xref="GeneID:947142" CDS complement(913181..914080) /gene="ybjE" /locus_tag="b0874" /gene_synonym="ECK0865; JW0858" /function="putative structure; Not classified" /note="putative surface protein" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415395.2" /db_xref="GI:90111181" /db_xref="ASAP:ABE-0002966" /db_xref="UniProtKB/Swiss-Prot:P75826" /db_xref="ECOCYC:G6458" /db_xref="EcoGene:EG13426" /db_xref="GeneID:947142" /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV PAAIVHGFILSLLVPILIAFFSA" gene complement(914575..915270) /gene="aqpZ" /locus_tag="b0875" /gene_synonym="bniP; ECK0866; JW0859" /db_xref="ECOCYC:EG13270" /db_xref="EcoGene:EG13270" /db_xref="GeneID:945497" CDS complement(914575..915270) /gene="aqpZ" /locus_tag="b0875" /gene_synonym="bniP; ECK0866; JW0859" /function="transport; Transport of small molecules: Other" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006970 - response to osmotic stress" /note="transmembrane water channel; aquaporin Z" /codon_start=1 /transl_table=11 /product="aquaporin Z" /protein_id="NP_415396.1" /db_xref="GI:16128843" /db_xref="ASAP:ABE-0002976" /db_xref="UniProtKB/Swiss-Prot:P60844" /db_xref="ECOCYC:EG13270" /db_xref="EcoGene:EG13270" /db_xref="GeneID:945497" /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII GGLIYRTLLEKRD" gene 915696..917354 /gene="ybjD" /locus_tag="b0876" /gene_synonym="ECK0867; JW0860" /db_xref="ECOCYC:G6459" /db_xref="EcoGene:EG13425" /db_xref="GeneID:945498" CDS 915696..917354 /gene="ybjD" /locus_tag="b0876" /gene_synonym="ECK0867; JW0860" /codon_start=1 /transl_table=11 /product="conserved protein with nucleoside triphosphate hydrolase domain" /protein_id="NP_415397.1" /db_xref="GI:16128844" /db_xref="ASAP:ABE-0002980" /db_xref="UniProtKB/Swiss-Prot:P75828" /db_xref="ECOCYC:G6459" /db_xref="EcoGene:EG13425" /db_xref="GeneID:945498" /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAI HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD" gene complement(917351..918343) /gene="ybjX" /locus_tag="b0877" /gene_synonym="ECK0868; JW0861" /db_xref="ECOCYC:G6460" /db_xref="EcoGene:EG13693" /db_xref="GeneID:946025" CDS complement(917351..918343) /gene="ybjX" /locus_tag="b0877" /gene_synonym="ECK0868; JW0861" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415398.1" /db_xref="GI:16128845" /db_xref="ASAP:ABE-0002982" /db_xref="UniProtKB/Swiss-Prot:P75829" /db_xref="ECOCYC:G6460" /db_xref="EcoGene:EG13693" /db_xref="GeneID:946025" /translation="MVKSTPCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCR PGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLA ANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMI SMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATK ACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWE SVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG" gene 918458..919573 /gene="macA" /locus_tag="b0878" /gene_synonym="ECK0869; JW0862; ybjY" /db_xref="ECOCYC:G6461" /db_xref="EcoGene:EG13694" /db_xref="GeneID:947322" CDS 918458..919573 /gene="macA" /locus_tag="b0878" /gene_synonym="ECK0869; JW0862; ybjY" /function="putative membrane; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 17214741" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="macrolide transporter subunit, membrane fusion protein (MFP) component" /protein_id="NP_415399.4" /db_xref="GI:90111182" /db_xref="ASAP:ABE-0002986" /db_xref="UniProtKB/Swiss-Prot:P75830" /db_xref="ECOCYC:G6461" /db_xref="EcoGene:EG13694" /db_xref="GeneID:947322" /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQI GTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA DMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ" gene 919570..921516 /gene="macB" /locus_tag="b0879" /gene_synonym="ECK0870; JW0863; ybjZ" /db_xref="ECOCYC:G6462" /db_xref="EcoGene:EG13695" /db_xref="GeneID:945164" CDS 919570..921516 /gene="macB" /locus_tag="b0879" /gene_synonym="ECK0870; JW0863; ybjZ" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component" /protein_id="NP_415400.1" /db_xref="GI:16128847" /db_xref="ASAP:ABE-0002989" /db_xref="UniProtKB/Swiss-Prot:P75831" /db_xref="ECOCYC:G6462" /db_xref="EcoGene:EG13695" /db_xref="GeneID:945164" /translation="MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASG SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRD GEIVRNPPAIEKVNVTGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVT GILFGWLPARNAARLDPVDALARE" gene complement(921589..921813) /gene="cspD" /locus_tag="b0880" /gene_synonym="cspH; ECK0871; JW0864; ybjA" /db_xref="ECOCYC:EG11111" /db_xref="EcoGene:EG11111" /db_xref="GeneID:945669" CDS complement(921589..921813) /gene="cspD" /locus_tag="b0880" /gene_synonym="cspH; ECK0871; JW0864; ybjA" /function="phenotype; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /GO_component="GO:0005737 - cytoplasm" /note="stress induced DNA replication inhibitor." /codon_start=1 /transl_table=11 /product="inhibitor of DNA replication, cold shock protein homolog" /protein_id="NP_415401.1" /db_xref="GI:16128848" /db_xref="ASAP:ABE-0002991" /db_xref="UniProtKB/Swiss-Prot:P0A968" /db_xref="ECOCYC:EG11111" /db_xref="EcoGene:EG11111" /db_xref="GeneID:945669" /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA GQSVQFDVHQGPKGNHASVIVPVEVEAAVA" gene 922136..922456 /gene="clpS" /locus_tag="b0881" /gene_synonym="ECK0872; JW0865; yljA" /db_xref="ECOCYC:G6463" /db_xref="EcoGene:EG14241" /db_xref="GeneID:948443" CDS 922136..922456 /gene="clpS" /locus_tag="b0881" /gene_synonym="ECK0872; JW0865; yljA" /codon_start=1 /transl_table=11 /product="regulatory protein for ClpA substrate specificity" /protein_id="NP_415402.1" /db_xref="GI:16128849" /db_xref="ASAP:ABE-0002998" /db_xref="UniProtKB/Swiss-Prot:P0A8Q6" /db_xref="ECOCYC:G6463" /db_xref="EcoGene:EG14241" /db_xref="GeneID:948443" /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT LEKA" gene 922487..924763 /gene="clpA" /locus_tag="b0882" /gene_synonym="ECK0873; JW0866; lopD" /db_xref="ECOCYC:EG10156" /db_xref="EcoGene:EG10156" /db_xref="GeneID:945764" CDS 922487..924763 /gene="clpA" /locus_tag="b0882" /gene_synonym="ECK0873; JW0866; lopD" /function="enzyme; Degradation of proteins, peptides, glyco" /experiment="N-terminus verified by Edman degradation: PMID 3049606" /GO_component="GO:0005737 - cytoplasm" /note="ATP-binding component of serine protease" /codon_start=1 /transl_table=11 /product="ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity" /protein_id="NP_415403.1" /db_xref="GI:16128850" /db_xref="ASAP:ABE-0003001" /db_xref="UniProtKB/Swiss-Prot:P0ABH9" /db_xref="ECOCYC:EG10156" /db_xref="EcoGene:EG10156" /db_xref="GeneID:945764" /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN ELTYGFQSAQKHKAEAAH" gene complement(925107..925194) /gene="serW" /locus_tag="b0883" /gene_synonym="ECK0874; JWR0025" /db_xref="ECOCYC:EG30096" /db_xref="EcoGene:EG30096" /db_xref="GeneID:945501" tRNA complement(925107..925194) /gene="serW" /locus_tag="b0883" /gene_synonym="ECK0874; JWR0025" /product="tRNA-Ser" /note="anticodon: GGA" /db_xref="ASAP:ABE-0003003" /db_xref="ECOCYC:EG30096" /db_xref="EcoGene:EG30096" /db_xref="GeneID:945501" gene complement(925448..925666) /gene="infA" /locus_tag="b0884" /gene_synonym="bypA1; ECK0875; JW0867" /db_xref="ECOCYC:EG10504" /db_xref="EcoGene:EG10504" /db_xref="GeneID:945500" CDS complement(925448..925666) /gene="infA" /locus_tag="b0884" /gene_synonym="bypA1; ECK0875; JW0867" /function="factor; Proteins - translation and modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006412 - translation" /note="protein chain initiation factor IF-1" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /protein_id="NP_415404.1" /db_xref="GI:16128851" /db_xref="ASAP:ABE-0003005" /db_xref="UniProtKB/Swiss-Prot:P69222" /db_xref="ECOCYC:EG10504" /db_xref="EcoGene:EG10504" /db_xref="GeneID:945500" /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY IRILTGDKVTVELTPYDLSKGRIVFRSR" mat_peptide complement(925451..925663) /gene="infA" /locus_tag="b0884" /gene_synonym="bypA1; ECK0875; JW0867" /product="translation initiation factor IF-1" /experiment="N-terminus verified by Edman degradation: PMID 376343,9868784" gene complement(925951..926655) /gene="aat" /locus_tag="b0885" /gene_synonym="ECK0876; JW0868; ycaA" /db_xref="ECOCYC:EG11112" /db_xref="EcoGene:EG11112" /db_xref="GeneID:945490" CDS complement(925951..926655) /gene="aat" /locus_tag="b0885" /gene_synonym="ECK0876; JW0868; ycaA" /EC_number="2.3.2.6" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006508 - proteolysis" /note="leucyl, phenylalanyl-tRNA-protein transferase" /codon_start=1 /transl_table=11 /product="leucyl/phenylalanyl-tRNA-protein transferase" /protein_id="NP_415405.1" /db_xref="GI:16128852" /db_xref="ASAP:ABE-0003009" /db_xref="UniProtKB/Swiss-Prot:P0A8P1" /db_xref="ECOCYC:EG11112" /db_xref="EcoGene:EG11112" /db_xref="GeneID:945490" /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR LPNNFWVPRCLFSPQE" gene complement(926697..928418) /gene="cydC" /locus_tag="b0886" /gene_synonym="ECK0877; JW0869; mdrA; mdrH; surB; ycaB" /db_xref="ECOCYC:EG10012" /db_xref="EcoGene:EG10012" /db_xref="GeneID:945504" CDS complement(926697..928418) /gene="cydC" /locus_tag="b0886" /gene_synonym="ECK0877; JW0869; mdrA; mdrH; surB; ycaB" /function="transport; Transport of small molecules: Other" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="ATP-binding component of cytochrome-related transport" /codon_start=1 /transl_table=11 /product="fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component" /protein_id="NP_415406.1" /db_xref="GI:16128853" /db_xref="ASAP:ABE-0003012" /db_xref="UniProtKB/Swiss-Prot:P23886" /db_xref="ECOCYC:EG10012" /db_xref="EcoGene:EG10012" /db_xref="GeneID:945504" /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDF TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVA DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDP QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEIL RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY YQFKQGL" gene complement(928419..930185) /gene="cydD" /locus_tag="b0887" /gene_synonym="ECK0878; htrD; JW0870" /db_xref="ECOCYC:EG11405" /db_xref="EcoGene:EG11405" /db_xref="GeneID:949052" CDS complement(928419..930185) /gene="cydD" /locus_tag="b0887" /gene_synonym="ECK0878; htrD; JW0870" /function="transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="ATP-binding component of cytochrome-related transport, Zn sensitive" /codon_start=1 /transl_table=11 /product="fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component" /protein_id="NP_415407.1" /db_xref="GI:16128854" /db_xref="ASAP:ABE-0003015" /db_xref="UniProtKB/Swiss-Prot:P29018" /db_xref="ECOCYC:EG11405" /db_xref="EcoGene:EG11405" /db_xref="GeneID:949052" /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH PQRGEAELASTDPVTIEAEELFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA SEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR YAELSVAGGPFATLLAHRQEEI" gene complement(930308..931273) /gene="trxB" /locus_tag="b0888" /gene_synonym="ECK0879; JW0871" /db_xref="ECOCYC:EG11032" /db_xref="EcoGene:EG11032" /db_xref="GeneID:949054" CDS complement(930308..931273) /gene="trxB" /locus_tag="b0888" /gene_synonym="ECK0879; JW0871" /EC_number="1.8.1.9" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /GO_component="GO:0005737 - cytoplasm" /note="thioredoxin reductase" /codon_start=1 /transl_table=11 /product="thioredoxin reductase, FAD/NAD(P)-binding" /protein_id="NP_415408.1" /db_xref="GI:16128855" /db_xref="ASAP:ABE-0003018" /db_xref="UniProtKB/Swiss-Prot:P0A9P4" /db_xref="ECOCYC:EG11032" /db_xref="EcoGene:EG11032" /db_xref="GeneID:949054" /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK" mat_peptide complement(930311..931270) /gene="trxB" /locus_tag="b0888" /gene_synonym="ECK0879; JW0871" /product="thioredoxin reductase, FAD/NAD(P)-binding" /experiment="N-terminus verified by Edman degradation: PMID 1575737,3288628" gene 931818..932312 /gene="lrp" /locus_tag="b0889" /gene_synonym="alsB; ECK0880; ihb; JW0872; livR; lrs; lss; lstR; mbf; oppI; rblA" /db_xref="ECOCYC:EG10547" /db_xref="EcoGene:EG10547" /db_xref="GeneID:949051" CDS 931818..932312 /gene="lrp" /locus_tag="b0889" /gene_synonym="alsB; ECK0880; ihb; JW0872; livR; lrs; lss; lstR; mbf; oppI; rblA" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0009098 - leucine biosynthetic process; GO:0006350 - transcription" /note="regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator, leucine-binding" /protein_id="NP_415409.1" /db_xref="GI:16128856" /db_xref="ASAP:ABE-0003023" /db_xref="UniProtKB/Swiss-Prot:P0ACJ0" /db_xref="ECOCYC:EG10547" /db_xref="EcoGene:EG10547" /db_xref="GeneID:949051" /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV IKTR" mat_peptide 931821..932309 /gene="lrp" /locus_tag="b0889" /gene_synonym="alsB; ECK0880; ihb; JW0872; livR; lrs; lss; lstR; mbf; oppI; rblA" /product="DNA-binding transcriptional dual regulator, leucine-binding" /experiment="N-terminus verified by Edman degradation: PMID 2115869" gene 932447..936436 /gene="ftsK" /locus_tag="b0890" /gene_synonym="dinH; ECK0881; JW0873" /db_xref="ECOCYC:G6464" /db_xref="EcoGene:EG13226" /db_xref="GeneID:945102" CDS 932447..936436 /gene="ftsK" /locus_tag="b0890" /gene_synonym="dinH; ECK0881; JW0873" /function="phenotype; Cell division" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009432 - SOS response" /note="cell division protein" /codon_start=1 /transl_table=11 /product="DNA translocase at septal ring sorting daughter chromsomes" /protein_id="NP_415410.1" /db_xref="GI:16128857" /db_xref="ASAP:ABE-0003027" /db_xref="UniProtKB/Swiss-Prot:P46889" /db_xref="ECOCYC:G6464" /db_xref="EcoGene:EG13226" /db_xref="GeneID:945102" /translation="MSQEYIEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDE EITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA APVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQ YNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQ TEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRARERE QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAA TVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKA REAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAA EAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQ QPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPV APQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPV DTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLA RSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDI AGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELS VYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRM MRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKAR AAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDM LYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGA EELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNR EVLAPPPFD" repeat_region 936447..936482 /note="REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 936595..937206 /gene="lolA" /locus_tag="b0891" /gene_synonym="ECK0882; JW0874; lplA; yzzV" /db_xref="ECOCYC:G6465" /db_xref="EcoGene:EG12684" /db_xref="GeneID:948989" CDS 936595..937206 /gene="lolA" /locus_tag="b0891" /gene_synonym="ECK0882; JW0874; lplA; yzzV" /function="transport; Protein, peptide secretion" /GO_component="GO:0042597 - periplasmic space" /note="periplasmic protein effects translocation of lipoproteins from inner membrane to outer" /codon_start=1 /transl_table=11 /product="chaperone for lipoproteins" /protein_id="NP_415411.2" /db_xref="GI:145698236" /db_xref="ASAP:ABE-0003031" /db_xref="UniProtKB/Swiss-Prot:P61316" /db_xref="ECOCYC:G6465" /db_xref="EcoGene:EG12684" /db_xref="GeneID:948989" /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK" mat_peptide 936661..937203 /gene="lolA" /locus_tag="b0891" /gene_synonym="ECK0882; JW0874; lplA; yzzV" /product="chaperone for lipoproteins" /experiment="N-terminus verified by Edman degradation: PMID 7628437,9298646" gene 937217..938560 /gene="rarA" /locus_tag="b0892" /gene_synonym="ECK0883; JW0875; ycaJ" /db_xref="ECOCYC:EG12690" /db_xref="EcoGene:EG12690" /db_xref="GeneID:945505" CDS 937217..938560 /gene="rarA" /locus_tag="b0892" /gene_synonym="ECK0883; JW0875; ycaJ" /function="putative enzyme; Not classified" /note="putative polynucleotide enzyme" /codon_start=1 /transl_table=11 /product="recombination protein involved in processing recombnation intermediates at replication forks" /protein_id="NP_415412.1" /db_xref="GI:16128859" /db_xref="ASAP:ABE-0003034" /db_xref="UniProtKB/Swiss-Prot:P0AAZ4" /db_xref="ECOCYC:EG12690" /db_xref="EcoGene:EG12690" /db_xref="GeneID:945505" /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM ADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA HDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR" gene 938651..939943 /gene="serS" /locus_tag="b0893" /gene_synonym="ECK0884; JW0876" /db_xref="ECOCYC:EG10947" /db_xref="EcoGene:EG10947" /db_xref="GeneID:945506" CDS 938651..939943 /gene="serS" /locus_tag="b0893" /gene_synonym="ECK0884; JW0876" /EC_number="6.1.1.11" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="serine tRNA synthetase; also charges selenocystein tRNA with serine" /codon_start=1 /transl_table=11 /product="seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine" /protein_id="NP_415413.1" /db_xref="GI:16128860" /db_xref="ASAP:ABE-0003038" /db_xref="UniProtKB/Swiss-Prot:P0A8L1" /db_xref="ECOCYC:EG10947" /db_xref="EcoGene:EG10947" /db_xref="GeneID:945506" /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG" gene 940182..942626 /gene="dmsA" /locus_tag="b0894" /gene_synonym="ECK0885; JW5118" /db_xref="ECOCYC:EG10232" /db_xref="EcoGene:EG10232" /db_xref="GeneID:945508" CDS 940182..942626 /gene="dmsA" /locus_tag="b0894" /gene_synonym="ECK0885; JW5118" /EC_number="1.8.99.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009061 - anaerobic respiration" /note="anaerobic dimethyl sulfoxide reductase subunit A" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, anaerobic, subunit A" /protein_id="NP_415414.4" /db_xref="GI:90111183" /db_xref="ASAP:ABE-0003044" /db_xref="UniProtKB/Swiss-Prot:P18775" /db_xref="ECOCYC:EG10232" /db_xref="EcoGene:EG10232" /db_xref="GeneID:945508" /translation="MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAH AVDSAIPTKSDEKVIWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVR ACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGN ESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYG GWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTD TGAGREDEWIPIRPGTDAALVNGLAYVMITENLVDQAFLDKYCVGYDEKTLPASAPKN GHYKAYILGEGPDGVAKTPEWASQITGVPADKIIKLAREIGSTKPAFISQGWGPQRHA NGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFVRMPTLENPIQTSISMFMWTD AIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCEL IVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFNDQVIKPRFECKTI YEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQSREAIPELPTFEEFRKQGIFKKRDP QGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGF ESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAACRQEMWINPLDAQKRGIHNGD KVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKRVDKGGCINVLTTQRPSPL AKGNPSHTNLVQVEKV" mat_peptide 940317..942623 /gene="dmsA" /locus_tag="b0894" /gene_synonym="ECK0885; JW5118" /product="dimethyl sulfoxide reductase, anaerobic, subunit A" /experiment="N-terminus verified by Edman degradation: PMID 3062312" gene 942637..943254 /gene="dmsB" /locus_tag="b0895" /gene_synonym="ECK0886; JW0878" /db_xref="ECOCYC:EG10233" /db_xref="EcoGene:EG10233" /db_xref="GeneID:945507" CDS 942637..943254 /gene="dmsB" /locus_tag="b0895" /gene_synonym="ECK0886; JW0878" /EC_number="1.8.99.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009061 - anaerobic respiration" /note="anaerobic dimethyl sulfoxide reductase subunit B" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, anaerobic, subunit B" /protein_id="NP_415415.1" /db_xref="GI:16128862" /db_xref="ASAP:ABE-0003046" /db_xref="UniProtKB/Swiss-Prot:P18776" /db_xref="ECOCYC:EG10233" /db_xref="EcoGene:EG10233" /db_xref="GeneID:945507" /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC RYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK KHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV" mat_peptide 942640..943251 /gene="dmsB" /locus_tag="b0895" /gene_synonym="ECK0886; JW0878" /product="dimethyl sulfoxide reductase, anaerobic, subunit B" /experiment="N-terminus verified by Edman degradation: PMID 3062312" gene 943256..944119 /gene="dmsC" /locus_tag="b0896" /gene_synonym="ECK0887; JW0879" /db_xref="ECOCYC:EG10234" /db_xref="EcoGene:EG10234" /db_xref="GeneID:945502" CDS 943256..944119 /gene="dmsC" /locus_tag="b0896" /gene_synonym="ECK0887; JW0879" /EC_number="1.8.99.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009061 - anaerobic respiration" /note="anaerobic dimethyl sulfoxide reductase subunit C" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, anaerobic, subunit C" /protein_id="NP_415416.1" /db_xref="GI:16128863" /db_xref="ASAP:ABE-0003048" /db_xref="UniProtKB/Swiss-Prot:P18777" /db_xref="ECOCYC:EG10234" /db_xref="EcoGene:EG10234" /db_xref="GeneID:945502" /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAA LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG LHMTVGMAVAS" gene complement(944154..944780) /gene="ycaC" /locus_tag="b0897" /gene_synonym="ECK0888; JW0880" /db_xref="ECOCYC:EG11241" /db_xref="EcoGene:EG11241" /db_xref="GeneID:945512" CDS complement(944154..944780) /gene="ycaC" /locus_tag="b0897" /gene_synonym="ECK0888; JW0880" /experiment="N-terminus verified by Edman degradation: PMID 9782055" /GO_process="GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="predicted hydrolase, isochorismatase family" /protein_id="NP_415417.1" /db_xref="GI:16128864" /db_xref="ASAP:ABE-0003050" /db_xref="UniProtKB/Swiss-Prot:P21367" /db_xref="ECOCYC:EG11241" /db_xref="EcoGene:EG11241" /db_xref="GeneID:945512" /translation="MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALG DLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKA TGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGA QLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK" gene 945094..946242 /gene="ycaD" /locus_tag="b0898" /gene_synonym="ECK0889; JW0881" /db_xref="ECOCYC:EG11242" /db_xref="EcoGene:EG11242" /db_xref="GeneID:945515" CDS 945094..946242 /gene="ycaD" /locus_tag="b0898" /gene_synonym="ECK0889; JW0881" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted MFS-type transporter" /protein_id="NP_415418.1" /db_xref="GI:16128865" /db_xref="ASAP:ABE-0003056" /db_xref="UniProtKB/Swiss-Prot:P21503" /db_xref="ECOCYC:EG11242" /db_xref="EcoGene:EG11242" /db_xref="GeneID:945515" /translation="MSTYTQPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVG VVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRF VAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSV LPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGS LYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVI LGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS LLGPSFTAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV" gene 946452..947882 /gene="ycaM" /locus_tag="b0899" /gene_synonym="ECK0890; JW5119" /db_xref="ECOCYC:G6466" /db_xref="EcoGene:EG13697" /db_xref="GeneID:945518" CDS 946452..947882 /gene="ycaM" /locus_tag="b0899" /gene_synonym="ECK0890; JW5119" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415419.2" /db_xref="GI:90111184" /db_xref="ASAP:ABE-0003058" /db_xref="UniProtKB/Swiss-Prot:P75835" /db_xref="ECOCYC:G6466" /db_xref="EcoGene:EG13697" /db_xref="GeneID:945518" /translation="MAGNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSW VFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLA QKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVLFIFFMWVASRGMKSLKIVGSVA GIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFIPHIDFTYITTISMLVFAVGGA EKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSLAMGMMFDSRNIPDDLMTNGQY YAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSIDAPLKVLLGDADSKYIPASLCR TNASGTPVNGYFLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAF IAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFACLTGIFPKMEAFTAEWTFQLA LNVATPFVLVGLGLIFPLLARKANSK" gene complement(947883..948791) /gene="ycaN" /locus_tag="b0900" /gene_synonym="ECK0891; JW0883" /db_xref="ECOCYC:G6467" /db_xref="EcoGene:EG13698" /db_xref="GeneID:945523" CDS complement(947883..948791) /gene="ycaN" /locus_tag="b0900" /gene_synonym="ECK0891; JW0883" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator LYSR-type" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415420.1" /db_xref="GI:16128867" /db_xref="ASAP:ABE-0003060" /db_xref="UniProtKB/Swiss-Prot:P75836" /db_xref="ECOCYC:G6467" /db_xref="EcoGene:EG13698" /db_xref="GeneID:945523" /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARV AARIFLMSLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIG PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQY MSCGLRAFLDYVKTGQICQSQRHRPQ" gene 948891..949481 /gene="ycaK" /locus_tag="b0901" /gene_synonym="ECK0892; JW0884" /db_xref="ECOCYC:EG12702" /db_xref="EcoGene:EG12702" /db_xref="GeneID:945520" CDS 948891..949481 /gene="ycaK" /locus_tag="b0901" /gene_synonym="ECK0892; JW0884" /GO_function="GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415421.1" /db_xref="GI:16128868" /db_xref="ASAP:ABE-0003065" /db_xref="UniProtKB/Swiss-Prot:P43340" /db_xref="ECOCYC:EG12702" /db_xref="EcoGene:EG12702" /db_xref="GeneID:945520" /translation="MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYR RNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYI DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIED ADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL" gene complement(949563..950303) /gene="pflA" /locus_tag="b0902" /gene_synonym="act; ECK0893; JW0885" /db_xref="ECOCYC:EG10028" /db_xref="EcoGene:EG10028" /db_xref="GeneID:945517" CDS complement(949563..950303) /gene="pflA" /locus_tag="b0902" /gene_synonym="act; ECK0893; JW0885" /EC_number="1.97.1.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009061 - anaerobic respiration; GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="pyruvate formate lyase activating enzyme 1" /protein_id="NP_415422.1" /db_xref="GI:16128869" /db_xref="ASAP:ABE-0003068" /db_xref="UniProtKB/Swiss-Prot:P0A9N4" /db_xref="ECOCYC:EG10028" /db_xref="EcoGene:EG10028" /db_xref="GeneID:945517" /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK LDGVKPPKKETMERVKGILEQYGHKVMF" mat_peptide complement(949566..950300) /gene="pflA" /locus_tag="b0902" /gene_synonym="act; ECK0893; JW0885" /product="pyruvate formate lyase activating enzyme 1" /experiment="N-terminus verified by Edman degradation: PMID 3053170" gene complement(950495..952777) /gene="pflB" /locus_tag="b0903" /gene_synonym="ECK0894; JW0886; pfl" /db_xref="ECOCYC:EG10701" /db_xref="EcoGene:EG10701" /db_xref="GeneID:945514" CDS complement(950495..952777) /gene="pflB" /locus_tag="b0903" /gene_synonym="ECK0894; JW0886; pfl" /EC_number="2.3.1.54" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009061 - anaerobic respiration; GO:0009063 - cellular amino acid catabolic process" /note="formate acetyltransferase 1" /codon_start=1 /transl_table=11 /product="pyruvate formate lyase I" /protein_id="NP_415423.1" /db_xref="GI:16128870" /db_xref="ASAP:ABE-0003071" /db_xref="UniProtKB/Swiss-Prot:P09373" /db_xref="ECOCYC:EG10701" /db_xref="EcoGene:EG10701" /db_xref="GeneID:945514" /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG VDEKLKMQVGPKSEPIKGDVLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF NSLTKEQQQDVITRTFTQSM" mat_peptide complement(950498..952774) /gene="pflB" /locus_tag="b0903" /gene_synonym="ECK0894; JW0886; pfl" /product="pyruvate formate lyase I" /experiment="N-terminus verified by Edman degradation: PMID 3053170,9629924" gene complement(952832..953689) /gene="focA" /locus_tag="b0904" /gene_synonym="ECK0895; JW0887; ycaE" /db_xref="ECOCYC:EG11258" /db_xref="EcoGene:EG11258" /db_xref="GeneID:945513" CDS complement(952832..953689) /gene="focA" /locus_tag="b0904" /gene_synonym="ECK0895; JW0887; ycaE" /function="putative transport; Degradation of small molecules: Carbon compounds" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process" /note="probable formate transporter (formate channel 1)" /codon_start=1 /transl_table=11 /product="formate channel" /protein_id="NP_415424.1" /db_xref="GI:16128871" /db_xref="ASAP:ABE-0003073" /db_xref="UniProtKB/Swiss-Prot:P0AC23" /db_xref="ECOCYC:EG11258" /db_xref="EcoGene:EG11258" /db_xref="GeneID:945513" /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV IYLRENDHH" gene complement(954095..955855) /gene="ycaO" /locus_tag="b0905" /gene_synonym="ECK0896; JW0888" /db_xref="ECOCYC:G6468" /db_xref="EcoGene:EG13699" /db_xref="GeneID:945509" CDS complement(954095..955855) /gene="ycaO" /locus_tag="b0905" /gene_synonym="ECK0896; JW0888" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415425.4" /db_xref="GI:90111185" /db_xref="ASAP:ABE-0003081" /db_xref="UniProtKB/Swiss-Prot:P75838" /db_xref="ECOCYC:G6468" /db_xref="EcoGene:EG13699" /db_xref="GeneID:945509" /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH QSLLKAYEKLQRAKAAFWAK" gene 955985..956677 /gene="ycaP" /locus_tag="b0906" /gene_synonym="ECK0897; JW0889" /db_xref="ECOCYC:G6469" /db_xref="EcoGene:EG13700" /db_xref="GeneID:945525" CDS 955985..956677 /gene="ycaP" /locus_tag="b0906" /gene_synonym="ECK0897; JW0889" /codon_start=1 /transl_table=11 /product="inner membrane protein, UPF0702 family" /protein_id="NP_415426.1" /db_xref="GI:16128873" /db_xref="ASAP:ABE-0003089" /db_xref="UniProtKB/Swiss-Prot:P75839" /db_xref="ECOCYC:G6469" /db_xref="EcoGene:EG13700" /db_xref="GeneID:945525" /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANP EWTKASRAKRVT" gene 956876..957964 /gene="serC" /locus_tag="b0907" /gene_synonym="ECK0898; JW0890; pdxC; pdxF" /db_xref="ECOCYC:EG10946" /db_xref="EcoGene:EG10946" /db_xref="GeneID:945527" CDS 956876..957964 /gene="serC" /locus_tag="b0907" /gene_synonym="ECK0898; JW0890; pdxC; pdxF" /EC_number="2.6.1.52" /function="enzyme; Amino acid biosynthesis: Serine" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006564 - L-serine biosynthetic process" /note="3-phosphoserine aminotransferase" /codon_start=1 /transl_table=11 /product="3-phosphoserine/phosphohydroxythreonine aminotransferase" /protein_id="NP_415427.1" /db_xref="GI:16128874" /db_xref="ASAP:ABE-0003093" /db_xref="UniProtKB/Swiss-Prot:P23721" /db_xref="ECOCYC:EG10946" /db_xref="EcoGene:EG10946" /db_xref="GeneID:945527" /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID ETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA NIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM RASIYNAMPLEGVKALTDFMVEFERRHG" mat_peptide 956879..957961 /gene="serC" /locus_tag="b0907" /gene_synonym="ECK0898; JW0890; pdxC; pdxF" /product="3-phosphoserine/phosphohydroxythreonine aminotransferase" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9740056" gene 958035..959318 /gene="aroA" /locus_tag="b0908" /gene_synonym="ECK0899; JW0891" /db_xref="ECOCYC:EG10073" /db_xref="EcoGene:EG10073" /db_xref="GeneID:945528" CDS 958035..959318 /gene="aroA" /locus_tag="b0908" /gene_synonym="ECK0899; JW0891" /EC_number="2.5.1.19" /function="enzyme; Amino acid biosynthesis: Chorismate" /GO_process="GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="5-enolpyruvylshikimate-3-phosphate synthetase" /protein_id="NP_415428.1" /db_xref="GI:16128875" /db_xref="ASAP:ABE-0003095" /db_xref="UniProtKB/Swiss-Prot:P0A6D3" /db_xref="ECOCYC:EG10073" /db_xref="EcoGene:EG10073" /db_xref="GeneID:945528" /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA" gene 959487..960251 /gene="ycaL" /locus_tag="b0909" /gene_synonym="ECK0900; JW0892" /db_xref="ECOCYC:G6470" /db_xref="EcoGene:EG13133" /db_xref="GeneID:945534" CDS 959487..960251 /gene="ycaL" /locus_tag="b0909" /gene_synonym="ECK0900; JW0892" /function="putative factor; Not classified" /GO_process="GO:0009266 - response to temperature stimulus" /note="putative heat shock protein" /codon_start=1 /transl_table=11 /product="predicted peptidase with chaperone function" /protein_id="NP_415429.2" /db_xref="GI:90111186" /db_xref="ASAP:ABE-0003098" /db_xref="UniProtKB/Swiss-Prot:P43674" /db_xref="ECOCYC:G6470" /db_xref="EcoGene:EG13133" /db_xref="GeneID:945534" /translation="MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATL SDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSD VNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDA ISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSF ETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK" gene 960424..961107 /gene="cmk" /locus_tag="b0910" /gene_synonym="ECK0901; JW0893; mssA; ycaF; ycaG" /db_xref="ECOCYC:EG11265" /db_xref="EcoGene:EG11265" /db_xref="GeneID:945535" CDS 960424..961107 /gene="cmk" /locus_tag="b0910" /gene_synonym="ECK0901; JW0893; mssA; ycaF; ycaG" /EC_number="2.7.4.14" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="cytidylate kinase" /protein_id="NP_415430.1" /db_xref="GI:16128877" /db_xref="ASAP:ABE-0003101" /db_xref="UniProtKB/Swiss-Prot:P0A6I0" /db_xref="ECOCYC:EG11265" /db_xref="EcoGene:EG11265" /db_xref="GeneID:945535" /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ VAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ YARQKLALA" gene 961218..962891 /gene="rpsA" /locus_tag="b0911" /gene_synonym="ECK0902; JW0894; ssyF" /db_xref="ECOCYC:EG10900" /db_xref="EcoGene:EG10900" /db_xref="GeneID:945536" CDS 961218..962891 /gene="rpsA" /locus_tag="b0911" /gene_synonym="ECK0902; JW0894; ssyF" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 7041110,7783627,9298646,9600841,11248028" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0003735 - structural constituent of ribosome" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S1" /protein_id="NP_415431.1" /db_xref="GI:16128878" /db_xref="ASAP:ABE-0003104" /db_xref="UniProtKB/Swiss-Prot:P0AG67" /db_xref="ECOCYC:EG10900" /db_xref="EcoGene:EG10900" /db_xref="GeneID:945536" /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE" gene 963051..963335 /gene="ihfB" /locus_tag="b0912" /gene_synonym="ECK0903; himD; hip; JW0895" /db_xref="ECOCYC:EG10441" /db_xref="EcoGene:EG10441" /db_xref="GeneID:945533" CDS 963051..963335 /gene="ihfB" /locus_tag="b0912" /gene_synonym="ECK0903; himD; hip; JW0895" /function="factor; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006310 - DNA recombination" /note="integration host factor (IHF), beta subunit; site-specific recombination" /codon_start=1 /transl_table=11 /product="integration host factor (IHF), DNA-binding protein, beta subunit" /protein_id="NP_415432.1" /db_xref="GI:16128879" /db_xref="ASAP:ABE-0003107" /db_xref="UniProtKB/Swiss-Prot:P0A6Y1" /db_xref="ECOCYC:EG10441" /db_xref="EcoGene:EG10441" /db_xref="GeneID:945533" /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG" gene 963543..965807 /gene="ycaI" /locus_tag="b0913" /gene_synonym="ECK0904; JW5120" /db_xref="ECOCYC:EG12375" /db_xref="EcoGene:EG12375" /db_xref="GeneID:945531" CDS 963543..965807 /gene="ycaI" /locus_tag="b0913" /gene_synonym="ECK0904; JW5120" /codon_start=1 /transl_table=11 /product="inner membrane protein, ComEC family of competence proteins" /protein_id="NP_415433.4" /db_xref="GI:90111187" /db_xref="ASAP:ABE-0003111" /db_xref="UniProtKB/Swiss-Prot:P37443" /db_xref="ECOCYC:EG12375" /db_xref="EcoGene:EG12375" /db_xref="GeneID:945531" /translation="MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPV KTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQ GRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRD TGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTG MQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAV AALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANL LAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIA ECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQ GLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGL DSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVK VDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKV ALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILP RWYHQWFGVPVDNG" gene 965844..967592 /gene="msbA" /locus_tag="b0914" /gene_synonym="ECK0905; JW0897" /db_xref="ECOCYC:EG10613" /db_xref="EcoGene:EG10613" /db_xref="GeneID:945530" CDS 965844..967592 /gene="msbA" /locus_tag="b0914" /gene_synonym="ECK0905; JW0897" /function="transport; Transport of small molecules: Other" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="ATP-binding transport protein; multicopy suppressor of htrB" /codon_start=1 /transl_table=11 /product="fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component" /protein_id="NP_415434.1" /db_xref="GI:16128881" /db_xref="ASAP:ABE-0003113" /db_xref="UniProtKB/Swiss-Prot:P60752" /db_xref="ECOCYC:EG10613" /db_xref="EcoGene:EG10613" /db_xref="GeneID:945530" /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL EHRGVYAQLHKMQFGQ" gene 967589..968575 /gene="lpxK" /locus_tag="b0915" /gene_synonym="ECK0906; JW0898; ycaH" /db_xref="ECOCYC:EG11409" /db_xref="EcoGene:EG11409" /db_xref="GeneID:945526" CDS 967589..968575 /gene="lpxK" /locus_tag="b0915" /gene_synonym="ECK0906; JW0898; ycaH" /EC_number="2.7.1.130" /function="putative enzyme; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009248 - K antigen biosynthetic process; GO:0009245 - lipid A biosynthetic process; GO:0009244 - lipopolysaccharide core region biosynthetic process" /codon_start=1 /transl_table=11 /product="lipid A 4'kinase" /protein_id="NP_415435.1" /db_xref="GI:16128882" /db_xref="ASAP:ABE-0003115" /db_xref="UniProtKB/Swiss-Prot:P27300" /db_xref="ECOCYC:EG11409" /db_xref="EcoGene:EG11409" /db_xref="GeneID:945526" /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTT TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV SAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTLLASGN" gene 968612..969844 /gene="ycaQ" /locus_tag="b0916" /gene_synonym="ECK0907; JW0899" /db_xref="ECOCYC:G6471" /db_xref="EcoGene:EG13701" /db_xref="GeneID:945524" CDS 968612..969844 /gene="ycaQ" /locus_tag="b0916" /gene_synonym="ECK0907; JW0899" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415436.1" /db_xref="GI:16128883" /db_xref="ASAP:ABE-0003117" /db_xref="UniProtKB/Swiss-Prot:P75843" /db_xref="ECOCYC:G6471" /db_xref="EcoGene:EG13701" /db_xref="GeneID:945524" /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHDDLLPLLERAL AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ LVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGCC PQGLFTDCRTGWEIDPVA" gene 969896..970078 /gene="ycaR" /locus_tag="b0917" /gene_synonym="ECK0908; JW0900" /db_xref="ECOCYC:G6472" /db_xref="EcoGene:EG14287" /db_xref="GeneID:945537" CDS 969896..970078 /gene="ycaR" /locus_tag="b0917" /gene_synonym="ECK0908; JW0900" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0434 family" /protein_id="NP_415437.1" /db_xref="GI:16128884" /db_xref="ASAP:ABE-0003120" /db_xref="UniProtKB/Swiss-Prot:P0AAZ7" /db_xref="ECOCYC:G6472" /db_xref="EcoGene:EG14287" /db_xref="GeneID:945537" /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV LLETEARVLTADESKS" gene 970075..970821 /gene="kdsB" /locus_tag="b0918" /gene_synonym="ECK0909; JW0901" /db_xref="ECOCYC:EG10519" /db_xref="EcoGene:EG10519" /db_xref="GeneID:945539" CDS 970075..970821 /gene="kdsB" /locus_tag="b0918" /gene_synonym="ECK0909; JW0901" /EC_number="2.7.7.38" /function="enzyme; Surface polysaccharides & antigens" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009248 - K antigen biosynthetic process; GO:0009245 - lipid A biosynthetic process; GO:0009244 - lipopolysaccharide core region biosynthetic process" /note="CTP:CMP-3-deoxy-D-manno-octulosonate transferase" /codon_start=1 /transl_table=11 /product="3-deoxy-manno-octulosonate cytidylyltransferase" /protein_id="NP_415438.1" /db_xref="GI:16128885" /db_xref="ASAP:ABE-0003122" /db_xref="UniProtKB/Swiss-Prot:P04951" /db_xref="ECOCYC:EG10519" /db_xref="EcoGene:EG10519" /db_xref="GeneID:945539" /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYG EKIHVAVAQEVPGTGVDTPEDLERVRAEMR" mat_peptide 970078..970818 /gene="kdsB" /locus_tag="b0918" /gene_synonym="ECK0909; JW0901" /product="3-deoxy-manno-octulosonate cytidylyltransferase" /experiment="N-terminus verified by Edman degradation: PMID 3023327" gene 970975..971868 /gene="ycbJ" /locus_tag="b0919" /gene_synonym="ECK0910; JW0902" /db_xref="ECOCYC:G6473" /db_xref="EcoGene:EG13702" /db_xref="GeneID:945545" CDS 970975..971868 /gene="ycbJ" /locus_tag="b0919" /gene_synonym="ECK0910; JW0902" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415439.1" /db_xref="GI:16128886" /db_xref="ASAP:ABE-0003125" /db_xref="UniProtKB/Swiss-Prot:P0AB03" /db_xref="ECOCYC:G6473" /db_xref="EcoGene:EG13702" /db_xref="GeneID:945545" /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN TGRFSRRNFDLASKSLLPWLA" gene complement(971845..972624) /gene="ycbC" /locus_tag="b0920" /gene_synonym="ECK0911; JW0903" /db_xref="ECOCYC:EG12166" /db_xref="EcoGene:EG12166" /db_xref="GeneID:945546" CDS complement(971845..972624) /gene="ycbC" /locus_tag="b0920" /gene_synonym="ECK0911; JW0903" /codon_start=1 /transl_table=11 /product="conserved protein, DUF218 superfamily" /protein_id="NP_415440.1" /db_xref="GI:16128887" /db_xref="ASAP:ABE-0003127" /db_xref="UniProtKB/Swiss-Prot:P0AB01" /db_xref="ECOCYC:EG12166" /db_xref="EcoGene:EG12166" /db_xref="GeneID:945546" /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFIS IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGSSGEPRQE" gene 972760..973545 /gene="smtA" /locus_tag="b0921" /gene_synonym="ECK0912; JW0904; ycbD" /db_xref="ECOCYC:EG12167" /db_xref="EcoGene:EG12167" /db_xref="GeneID:945547" CDS 972760..973545 /gene="smtA" /locus_tag="b0921" /gene_synonym="ECK0912; JW0904; ycbD" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_process="GO:0006071 - glycerol metabolic process" /note="S-adenosylmethionine-dependent methyltransferase" /codon_start=1 /transl_table=11 /product="predicted S-adenosyl-L-methionine-dependent methyltransferase" /protein_id="NP_415441.1" /db_xref="GI:16128888" /db_xref="ASAP:ABE-0003131" /db_xref="UniProtKB/Swiss-Prot:P36566" /db_xref="ECOCYC:EG12167" /db_xref="EcoGene:EG12167" /db_xref="GeneID:945547" /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV" gene 973542..974864 /gene="mukF" /locus_tag="b0922" /gene_synonym="ECK0913; JW0905; kicB" /db_xref="ECOCYC:EG12165" /db_xref="EcoGene:EG12165" /db_xref="GeneID:945548" CDS 973542..974864 /gene="mukF" /locus_tag="b0922" /gene_synonym="ECK0913; JW0905; kicB" /function="factor; Cell killing" /note="mukF protein (killing factor KICB)" /codon_start=1 /transl_table=11 /product="chromosome condensin MukBEF, kleisin-like subunit, binds calcium" /protein_id="NP_415442.1" /db_xref="GI:16128889" /db_xref="ASAP:ABE-0003134" /db_xref="UniProtKB/Swiss-Prot:P60293" /db_xref="ECOCYC:EG12165" /db_xref="EcoGene:EG12165" /db_xref="GeneID:945548" /translation="MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY" gene 974845..975549 /gene="mukE" /locus_tag="b0923" /gene_synonym="ECK0914; JW0906; kicA; ycbA" /db_xref="ECOCYC:EG11252" /db_xref="EcoGene:EG11252" /db_xref="GeneID:945550" CDS 974845..975549 /gene="mukE" /locus_tag="b0923" /gene_synonym="ECK0914; JW0906; kicA; ycbA" /codon_start=1 /transl_table=11 /product="chromosome condensin MukBEF, MukE subunit" /protein_id="NP_415443.2" /db_xref="GI:226524705" /db_xref="ASAP:ABE-0003136" /db_xref="UniProtKB/Swiss-Prot:P22524" /db_xref="ECOCYC:EG11252" /db_xref="EcoGene:EG11252" /db_xref="GeneID:945550" /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ LNDETEENQPDSGEEE" gene 975549..980009 /gene="mukB" /locus_tag="b0924" /gene_synonym="ECK0915; JW0907" /db_xref="ECOCYC:EG10618" /db_xref="EcoGene:EG10618" /db_xref="GeneID:945549" CDS 975549..980009 /gene="mukB" /locus_tag="b0924" /gene_synonym="ECK0915; JW0907" /function="structural component; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 1464330" /note="kinesin-like cell division protein involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="chromosome condensin MukBEF, ATPase and DNA-binding subunit" /protein_id="NP_415444.1" /db_xref="GI:16128891" /db_xref="ASAP:ABE-0003138" /db_xref="UniProtKB/Swiss-Prot:P22523" /db_xref="ECOCYC:EG10618" /db_xref="EcoGene:EG10618" /db_xref="GeneID:945549" /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQQENEARAEAAELEV DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADCAAEWLETFQAK ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGD PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS ERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHE NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT KKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIR TDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGL QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS" gene 980270..982117 /gene="ycbB" /locus_tag="b0925" /gene_synonym="ECK0916; JW0908" /db_xref="ECOCYC:EG11253" /db_xref="EcoGene:EG11253" /db_xref="GeneID:945541" CDS 980270..982117 /gene="ycbB" /locus_tag="b0925" /gene_synonym="ECK0916; JW0908" /function="enzyme; Murein sacculus, peptidoglycan" /note="putative amidase" /codon_start=1 /transl_table=11 /product="murein L,D-transpeptidase" /protein_id="NP_415445.1" /db_xref="GI:16128892" /db_xref="ASAP:ABE-0003142" /db_xref="UniProtKB/Swiss-Prot:P22525" /db_xref="ECOCYC:EG11253" /db_xref="EcoGene:EG11253" /db_xref="GeneID:945541" /translation="MLLNMMCGRQLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA AMHESLLALLCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI RQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR" gene 982298..982846 /gene="ycbK" /locus_tag="b0926" /gene_synonym="ECK0917; JW0909" /db_xref="ECOCYC:G6474" /db_xref="EcoGene:EG13703" /db_xref="GeneID:945538" CDS 982298..982846 /gene="ycbK" /locus_tag="b0926" /gene_synonym="ECK0917; JW0909" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415446.1" /db_xref="GI:16128893" /db_xref="ASAP:ABE-0003145" /db_xref="UniProtKB/Swiss-Prot:P0AB06" /db_xref="ECOCYC:G6474" /db_xref="EcoGene:EG13703" /db_xref="GeneID:945538" /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA GGVGYYPRSNFVHIDTGPARHW" gene 982873..983520 /gene="ycbL" /locus_tag="b0927" /gene_synonym="ECK0918; JW0910" /db_xref="ECOCYC:G6475" /db_xref="EcoGene:EG13704" /db_xref="GeneID:945551" CDS 982873..983520 /gene="ycbL" /locus_tag="b0927" /gene_synonym="ECK0918; JW0910" /codon_start=1 /transl_table=11 /product="predicted metal-binding enzyme" /protein_id="NP_415447.1" /db_xref="GI:16128894" /db_xref="ASAP:ABE-0003147" /db_xref="UniProtKB/Swiss-Prot:P75849" /db_xref="ECOCYC:G6475" /db_xref="EcoGene:EG13704" /db_xref="GeneID:945551" /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR SDFPRGDHNQLISSIKDKLLPLGDDVIFIPGHGPLSTLGYERLHNPFLQDEMPVW" repeat_region 983584..983681 /note="RIP86 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(983742..984932) /gene="aspC" /locus_tag="b0928" /gene_synonym="ECK0919; JW0911" /db_xref="ECOCYC:EG10096" /db_xref="EcoGene:EG10096" /db_xref="GeneID:945553" CDS complement(983742..984932) /gene="aspC" /locus_tag="b0928" /gene_synonym="ECK0919; JW0911" /EC_number="2.6.1.1" /function="enzyme; Amino acid biosynthesis: Aspartate" /experiment="N-terminus verified by Edman degradation: PMID 387032,3298240,6378205,9298646,11736651" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006532 - aspartate biosynthetic process; GO:0009063 - cellular amino acid catabolic process" /note="aspartate aminotransferase" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase, PLP-dependent" /protein_id="NP_415448.1" /db_xref="GI:16128895" /db_xref="ASAP:ABE-0003150" /db_xref="UniProtKB/Swiss-Prot:P00509" /db_xref="ECOCYC:EG10096" /db_xref="EcoGene:EG10096" /db_xref="GeneID:945553" /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPG GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI VAVL" gene complement(985117..986205) /gene="ompF" /locus_tag="b0929" /gene_synonym="cmlB; coa; cry; ECK0920; JW0912; nfxB?; tolF" /db_xref="ECOCYC:EG10671" /db_xref="EcoGene:EG10671" /db_xref="GeneID:945554" CDS complement(985117..986205) /gene="ompF" /locus_tag="b0929" /gene_synonym="cmlB; coa; cry; ECK0920; JW0912; nfxB?; tolF" /function="membrane; Outer membrane constituents" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="outer membrane protein 1a (Ia;b;F)" /codon_start=1 /transl_table=11 /product="outer membrane porin 1a (Ia;b;F)" /protein_id="NP_415449.1" /db_xref="GI:16128896" /db_xref="ASAP:ABE-0003153" /db_xref="UniProtKB/Swiss-Prot:P02931" /db_xref="ECOCYC:EG10671" /db_xref="EcoGene:EG10671" /db_xref="GeneID:945554" /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD YIINQIDSDNKLGVGSDDTVAVGIVYQF" mat_peptide complement(985120..986139) /gene="ompF" /locus_tag="b0929" /gene_synonym="cmlB; coa; cry; ECK0920; JW0912; nfxB?; tolF" /product="outer membrane porin 1a (Ia;b;F)" /experiment="N-terminus verified by Edman degradation: PMID 7001461,9298646,9629924" gene complement(986808..988208) /gene="asnS" /locus_tag="b0930" /gene_synonym="ECK0921; JW0913; lcs; tss" /db_xref="ECOCYC:EG10094" /db_xref="EcoGene:EG10094" /db_xref="GeneID:945555" CDS complement(986808..988208) /gene="asnS" /locus_tag="b0930" /gene_synonym="ECK0921; JW0913; lcs; tss" /EC_number="6.1.1.22" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /note="asparagine tRNA synthetase" /codon_start=1 /transl_table=11 /product="asparaginyl tRNA synthetase" /protein_id="NP_415450.1" /db_xref="GI:16128897" /db_xref="ASAP:ABE-0003162" /db_xref="UniProtKB/Swiss-Prot:P0A8M0" /db_xref="ECOCYC:EG10094" /db_xref="EcoGene:EG10094" /db_xref="GeneID:945555" /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN VRDVIPFPRTPRNASF" mat_peptide complement(986811..988205) /gene="asnS" /locus_tag="b0930" /gene_synonym="ECK0921; JW0913; lcs; tss" /product="asparaginyl tRNA synthetase" /experiment="N-terminus verified by Edman degradation: PMID 2693216,9298646" gene complement(988377..989579) /gene="pncB" /locus_tag="b0931" /gene_synonym="ECK0922; JW0914" /db_xref="ECOCYC:EG10742" /db_xref="EcoGene:EG10742" /db_xref="GeneID:946648" CDS complement(988377..989579) /gene="pncB" /locus_tag="b0931" /gene_synonym="ECK0922; JW0914" /EC_number="2.4.2.11" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /protein_id="NP_415451.1" /db_xref="GI:16128898" /db_xref="ASAP:ABE-0003167" /db_xref="UniProtKB/Swiss-Prot:P18133" /db_xref="ECOCYC:EG10742" /db_xref="EcoGene:EG10742" /db_xref="GeneID:946648" /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD DLLGIYADAIREQVQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR YQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD LPHIKKAS" mat_peptide complement(988380..989576) /gene="pncB" /locus_tag="b0931" /gene_synonym="ECK0922; JW0914" /product="nicotinate phosphoribosyltransferase" /experiment="N-terminus verified by Edman degradation: PMID 2211655" gene 989845..992457 /gene="pepN" /locus_tag="b0932" /gene_synonym="ECK0923; JW0915" /db_xref="ECOCYC:EG10696" /db_xref="EcoGene:EG10696" /db_xref="GeneID:947253" CDS 989845..992457 /gene="pepN" /locus_tag="b0932" /gene_synonym="ECK0923; JW0915" /EC_number="3.4.11.2" /function="enzyme; Degradation of proteins, peptides, glyco" /experiment="N-terminus verified by Edman degradation: PMID 2869947" /codon_start=1 /transl_table=11 /product="aminopeptidase N" /protein_id="NP_415452.1" /db_xref="GI:16128899" /db_xref="ASAP:ABE-0003171" /db_xref="UniProtKB/Swiss-Prot:P04825" /db_xref="ECOCYC:EG10696" /db_xref="EcoGene:EG10696" /db_xref="GeneID:947253" /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAA NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGN RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNS VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN ACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH QNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH AEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN LSGDLYEKITKALA" gene complement(992500..993267) /gene="ssuB" /locus_tag="b0933" /gene_synonym="ECK0924; JW0916; ycbE" /db_xref="ECOCYC:EG12358" /db_xref="EcoGene:EG12358" /db_xref="GeneID:947220" CDS complement(992500..993267) /gene="ssuB" /locus_tag="b0933" /gene_synonym="ECK0924; JW0916; ycbE" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006790 - sulfur metabolic process" /note="ATP-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="alkanesulfonate transporter subunit" /protein_id="NP_415453.1" /db_xref="GI:16128900" /db_xref="ASAP:ABE-0003173" /db_xref="UniProtKB/Swiss-Prot:P0AAI1" /db_xref="ECOCYC:EG12358" /db_xref="EcoGene:EG12358" /db_xref="GeneID:947220" /translation="MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVG RSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVG LGLKGQWRDAARRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL GALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD IPRPRRLGSVRLAELEAEVLQRVMQRGESETRLRKQG" gene complement(993264..994055) /gene="ssuC" /locus_tag="b0934" /gene_synonym="ECK0925; JW5121; ycbM" /db_xref="ECOCYC:G6476" /db_xref="EcoGene:EG13705" /db_xref="GeneID:947216" CDS complement(993264..994055) /gene="ssuC" /locus_tag="b0934" /gene_synonym="ECK0925; JW5121; ycbM" /function="putative transport; Not classified" /GO_component="GO:0009274 - peptidoglycan-based cell wall; GO:0042597 - periplasmic space" /GO_process="GO:0006793 - phosphorus metabolic process" /note="membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="putative alkanesulfonate transporter subunit" /protein_id="NP_415454.4" /db_xref="GI:90111188" /db_xref="ASAP:ABE-0003175" /db_xref="UniProtKB/Swiss-Prot:P75851" /db_xref="ECOCYC:G6476" /db_xref="EcoGene:EG13705" /db_xref="GeneID:947216" /translation="MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEG VVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQ MLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARS YGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREF LQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV" gene complement(994066..995211) /gene="ssuD" /locus_tag="b0935" /gene_synonym="ECK0926; JW0918; ssi6; ycbN" /db_xref="ECOCYC:G6477" /db_xref="EcoGene:EG13706" /db_xref="GeneID:945557" CDS complement(994066..995211) /gene="ssuD" /locus_tag="b0935" /gene_synonym="ECK0926; JW0918; ssi6; ycbN" /EC_number="1.14.14.5" /GO_process="GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="alkanesulfonate monooxygenase, FMNH(2)-dependent" /protein_id="NP_415455.1" /db_xref="GI:16128902" /db_xref="ASAP:ABE-0003178" /db_xref="UniProtKB/Swiss-Prot:P80645" /db_xref="ECOCYC:G6477" /db_xref="EcoGene:EG13706" /db_xref="GeneID:945557" /translation="MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGY TGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGR ALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGA KLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAH GRKIRFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFARTDSVGQQRMAAL HNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPH LEEAYRVGELLFPLLDVAIPEIPQPQPLNPQGEAVANDFIPRKVAQS" mat_peptide complement(994069..995208) /gene="ssuD" /locus_tag="b0935" /gene_synonym="ECK0926; JW0918; ssi6; ycbN" /product="alkanesulfonate monooxygenase, FMNH(2)-dependent" /experiment="N-terminus verified by Edman degradation: PMID 8774726" gene complement(995208..996167) /gene="ssuA" /locus_tag="b0936" /gene_synonym="ECK0927; JW0919; ycbO" /db_xref="ECOCYC:G6478" /db_xref="EcoGene:EG13707" /db_xref="GeneID:945560" CDS complement(995208..996167) /gene="ssuA" /locus_tag="b0936" /gene_synonym="ECK0927; JW0919; ycbO" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006793 - phosphorus metabolic process" /note="periplasmic-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="putative aliphatic sulfonate binding protein" /protein_id="NP_415456.4" /db_xref="GI:90111189" /db_xref="ASAP:ABE-0003180" /db_xref="UniProtKB/Swiss-Prot:P75853" /db_xref="ECOCYC:G6478" /db_xref="EcoGene:EG13707" /db_xref="GeneID:945560" /translation="MRNIIKLALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAK SHQLLEKRYPESKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL" gene complement(996160..996735) /gene="ssuE" /locus_tag="b0937" /gene_synonym="ECK0928; JW0920; ssi4; ycbP" /db_xref="ECOCYC:G6479" /db_xref="EcoGene:EG13708" /db_xref="GeneID:945947" CDS complement(996160..996735) /gene="ssuE" /locus_tag="b0937" /gene_synonym="ECK0928; JW0920; ssi4; ycbP" /EC_number="1.5.1.29" /experiment="N-terminus verified by Edman degradation: PMID 8774726" /GO_function="GO:0009055 - electron carrier activity" /GO_process="GO:0042594 - response to starvation; GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="NAD(P)H-dependent FMN reductase" /protein_id="NP_415457.1" /db_xref="GI:16128904" /db_xref="ASAP:ABE-0003182" /db_xref="UniProtKB/Swiss-Prot:P80644" /db_xref="ECOCYC:G6479" /db_xref="EcoGene:EG13708" /db_xref="GeneID:945947" /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAP EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR LDTALETFWQALHRRDVQVPDLLSLRGNAHA" gene 997091..997630 /gene="ycbQ" /locus_tag="b0938" /gene_synonym="ECK0929; elfA; JW5122" /db_xref="ECOCYC:G6480" /db_xref="EcoGene:EG13709" /db_xref="GeneID:948306" CDS 997091..997630 /gene="ycbQ" /locus_tag="b0938" /gene_synonym="ECK0929; elfA; JW5122" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415458.2" /db_xref="GI:90111190" /db_xref="ASAP:ABE-0003185" /db_xref="UniProtKB/Swiss-Prot:P75855" /db_xref="ECOCYC:G6480" /db_xref="EcoGene:EG13709" /db_xref="GeneID:948306" /translation="MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACT LVAATKDSVVTLPDVSATKLQTNGQVSGVQIDVPIELKDCDTTVTKNATFTFNGTADT TQITAFANQASSDAATNVALQMYMNDGTTAITPDTETGNILLQDGDQTLTFKVDYIAT GKATSGNVNAVTNFHINYY" gene 997713..998414 /gene="ycbR" /locus_tag="b0939" /gene_synonym="ECK0930; elfD; JW0922" /db_xref="ECOCYC:G6481" /db_xref="EcoGene:EG13710" /db_xref="GeneID:946773" CDS 997713..998414 /gene="ycbR" /locus_tag="b0939" /gene_synonym="ECK0930; elfD; JW0922" /function="putative factor; Not classified" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="predicted periplasmic pilin chaperone" /protein_id="NP_415459.1" /db_xref="GI:16128906" /db_xref="ASAP:ABE-0003187" /db_xref="UniProtKB/Swiss-Prot:P75856" /db_xref="ECOCYC:G6481" /db_xref="EcoGene:EG13710" /db_xref="GeneID:946773" /translation="MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEG EEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGA PLAKDRETLFFTSVRAVPSTTKRKEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLR CTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRT INDYGAETPQLNCKS" gene 998439..1001039 /gene="ycbS" /locus_tag="b0940" /gene_synonym="ECK0931; elfC; JW0923" /db_xref="ECOCYC:G6482" /db_xref="EcoGene:EG13711" /db_xref="GeneID:946934" CDS 998439..1001039 /gene="ycbS" /locus_tag="b0940" /gene_synonym="ECK0931; elfC; JW0923" /function="putative membrane; Not classified" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted outer membrane usher protein" /protein_id="NP_415460.1" /db_xref="GI:16128907" /db_xref="ASAP:ABE-0003189" /db_xref="UniProtKB/Swiss-Prot:P75857" /db_xref="ECOCYC:G6482" /db_xref="EcoGene:EG13711" /db_xref="GeneID:946934" /translation="MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFF KDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTE SLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR GYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNS TWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNM LPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVE IKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGP WGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLY AKTLNHLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFY TKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGISWNY SKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLG LTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNY ALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSY RENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRF GAIATLDGVQANSGIIDDDGSLYMAGLPAKGTISVRWGEAPDQICHINYELTEQQINS AITRMDAICR" gene 1001030..1002100 /gene="ycbT" /locus_tag="b0941" /gene_synonym="ECK0932; elfG; JW0924" /db_xref="ECOCYC:G6483" /db_xref="EcoGene:EG13712" /db_xref="GeneID:947185" CDS 1001030..1002100 /gene="ycbT" /locus_tag="b0941" /gene_synonym="ECK0932; elfG; JW0924" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415461.1" /db_xref="GI:16128908" /db_xref="ASAP:ABE-0003191" /db_xref="UniProtKB/Swiss-Prot:P75858" /db_xref="ECOCYC:G6483" /db_xref="EcoGene:EG13712" /db_xref="GeneID:947185" /translation="MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYI GVNFGVKTLEEEANTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVY LGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASG NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSL GSCSVNAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSL TATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVS TTGVPPETGRFEATATVRINFD" gene 1002112..1002654 /gene="ycbU" /locus_tag="b0942" /gene_synonym="ECK0933; JW0925" /db_xref="ECOCYC:G6484" /db_xref="EcoGene:EG13713" /db_xref="GeneID:945561" CDS 1002112..1002654 /gene="ycbU" /locus_tag="b0942" /gene_synonym="ECK0933; JW0925" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415462.1" /db_xref="GI:16128909" /db_xref="ASAP:ABE-0003193" /db_xref="UniProtKB/Swiss-Prot:P75859" /db_xref="ECOCYC:G6484" /db_xref="EcoGene:EG13713" /db_xref="GeneID:945561" /translation="MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDV ATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAP TLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKST KAGATGGNATAVLYFDLVYQ" gene 1002662..1003177 /gene="ycbV" /locus_tag="b0943" /gene_synonym="ECK0934; JW5123" /db_xref="ECOCYC:G6485" /db_xref="EcoGene:EG13714" /db_xref="GeneID:945562" CDS 1002662..1003177 /gene="ycbV" /locus_tag="b0943" /gene_synonym="ECK0934; JW5123" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative fimbrial-like protein" /codon_start=1 /transl_table=11 /product="predicted fimbrial-like adhesin protein" /protein_id="NP_415463.2" /db_xref="GI:90111191" /db_xref="ASAP:ABE-0003195" /db_xref="UniProtKB/Swiss-Prot:P75860" /db_xref="ECOCYC:G6485" /db_xref="EcoGene:EG13714" /db_xref="GeneID:945562" /translation="MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDS KQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSI ESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKV NASATFVLHYD" gene 1003170..1003880 /gene="ycbF" /locus_tag="b0944" /gene_synonym="ECK0935; JW5124" /db_xref="ECOCYC:EG12397" /db_xref="EcoGene:EG12397" /db_xref="GeneID:945559" CDS 1003170..1003880 /gene="ycbF" /locus_tag="b0944" /gene_synonym="ECK0935; JW5124" /function="putative factor; Not classified" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="predicted periplasmic pilini chaperone" /protein_id="NP_415464.4" /db_xref="GI:90111192" /db_xref="ASAP:ABE-0003197" /db_xref="UniProtKB/Swiss-Prot:P40876" /db_xref="ECOCYC:EG12397" /db_xref="EcoGene:EG12397" /db_xref="GeneID:945559" /translation="MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESI SILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRT ESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAW RAINDYGGLSAKKEQNLP" gene 1003991..1005001 /gene="pyrD" /locus_tag="b0945" /gene_synonym="ECK0936; JW0928" /db_xref="ECOCYC:EG10807" /db_xref="EcoGene:EG10807" /db_xref="GeneID:945556" CDS 1003991..1005001 /gene="pyrD" /locus_tag="b0945" /gene_synonym="ECK0936; JW0928" /EC_number="1.3.3.1" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 2992959" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006221 - pyrimidine nucleotide biosynthetic process" /note="dihydro-orotate dehydrogenase" /codon_start=1 /transl_table=11 /product="dihydro-orotate oxidase, FMN-linked" /protein_id="NP_415465.1" /db_xref="GI:16128912" /db_xref="ASAP:ABE-0003201" /db_xref="UniProtKB/Swiss-Prot:P0A7E1" /db_xref="ECOCYC:EG10807" /db_xref="EcoGene:EG10807" /db_xref="GeneID:945556" /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT HI" gene 1005175..1005717 /gene="ycbW" /locus_tag="b0946" /gene_synonym="ECK0937; JW5125" /db_xref="ECOCYC:G6486" /db_xref="EcoGene:EG13715" /db_xref="GeneID:945552" CDS 1005175..1005717 /gene="ycbW" /locus_tag="b0946" /gene_synonym="ECK0937; JW5125" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415466.4" /db_xref="GI:90111193" /db_xref="ASAP:ABE-0003204" /db_xref="UniProtKB/Swiss-Prot:P75862" /db_xref="ECOCYC:G6486" /db_xref="EcoGene:EG13715" /db_xref="GeneID:945552" /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHG EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI MNDRLKPQVNVDSFSLEQAV" gene complement(1005714..1006823) /gene="ycbX" /locus_tag="b0947" /gene_synonym="ECK0938; JW5126" /db_xref="ECOCYC:G6487" /db_xref="EcoGene:EG13716" /db_xref="GeneID:945563" CDS complement(1005714..1006823) /gene="ycbX" /locus_tag="b0947" /gene_synonym="ECK0938; JW5126" /GO_function="GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="predicted 2Fe-2S cluster-containing protein; 6-N-hydroxylaminopurine resistance protein" /protein_id="NP_415467.1" /db_xref="GI:16128914" /db_xref="ASAP:ABE-0003206" /db_xref="UniProtKB/Swiss-Prot:P75863" /db_xref="ECOCYC:G6487" /db_xref="EcoGene:EG13716" /db_xref="GeneID:945563" /translation="MATLIRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ LLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR" gene 1007067..1009175 /gene="rlmL" /locus_tag="b0948" /gene_synonym="ECK0939; JW0931; ycbY" /db_xref="ECOCYC:G6488" /db_xref="EcoGene:EG13717" /db_xref="GeneID:945564" CDS 1007067..1009175 /gene="rlmL" /locus_tag="b0948" /gene_synonym="ECK0939; JW0931; ycbY" /function="enzyme; rRNA modification" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="23S rRNA mG2445 methyltransferase, SAM-dependent" /protein_id="NP_415468.1" /db_xref="GI:16128915" /db_xref="ASAP:ABE-0003211" /db_xref="UniProtKB/Swiss-Prot:P75864" /db_xref="ECOCYC:G6488" /db_xref="EcoGene:EG13717" /db_xref="GeneID:945564" /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH LRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTI DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT LSQDFARNRQIHNCWLITAA" gene 1009187..1011094 /gene="uup" /locus_tag="b0949" /gene_synonym="ECK0940; JW0932; ycbH; ycbI" /db_xref="ECOCYC:G6489" /db_xref="EcoGene:EG13134" /db_xref="GeneID:945566" CDS 1009187..1011094 /gene="uup" /locus_tag="b0949" /gene_synonym="ECK0940; JW0932; ycbH; ycbI" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="fused predicted transporter subunits of ABC superfamily: ATP-binding components" /protein_id="NP_415469.1" /db_xref="GI:16128916" /db_xref="ASAP:ABE-0003213" /db_xref="UniProtKB/Swiss-Prot:P43672" /db_xref="ECOCYC:G6489" /db_xref="EcoGene:EG13134" /db_xref="GeneID:945566" /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVNGKQL VKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA ELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLL LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER WEYLEALKNGG" repeat_region 1011142..1011170 /note="REP87 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1011224..1012477 /gene="pqiA" /locus_tag="b0950" /gene_synonym="ECK0941; JW0933; pqi5" /db_xref="ECOCYC:G6490" /db_xref="EcoGene:EG12965" /db_xref="GeneID:944999" CDS 1011224..1012477 /gene="pqiA" /locus_tag="b0950" /gene_synonym="ECK0941; JW0933; pqi5" /function="phenotype; Not classified" /note="paraquat-inducible protein A" /codon_start=1 /transl_table=11 /product="paraquat-inducible membrane protein A" /protein_id="NP_415470.1" /db_xref="GI:16128917" /db_xref="ASAP:ABE-0003219" /db_xref="UniProtKB/Swiss-Prot:P0AFL9" /db_xref="ECOCYC:G6490" /db_xref="EcoGene:EG12965" /db_xref="GeneID:944999" /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM TMFSAMTFDPRLSWDRQPESEHEES" gene 1012482..1014122 /gene="pqiB" /locus_tag="b0951" /gene_synonym="ECK0942; JW0934; pqi5" /db_xref="ECOCYC:G6491" /db_xref="EcoGene:EG12966" /db_xref="GeneID:945653" CDS 1012482..1014122 /gene="pqiB" /locus_tag="b0951" /gene_synonym="ECK0942; JW0934; pqi5" /function="phenotype; Not classified" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein B" /protein_id="NP_415471.1" /db_xref="GI:16128918" /db_xref="ASAP:ABE-0003221" /db_xref="UniProtKB/Swiss-Prot:P43671" /db_xref="ECOCYC:G6491" /db_xref="EcoGene:EG12966" /db_xref="GeneID:945653" /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRF WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR IPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ" gene 1014119..1014682 /gene="ymbA" /locus_tag="b0952" /gene_synonym="ECK0943; JW5127" /db_xref="ECOCYC:G6492" /db_xref="EcoGene:EG13719" /db_xref="GeneID:946972" CDS 1014119..1014682 /gene="ymbA" /locus_tag="b0952" /gene_synonym="ECK0943; JW5127" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415472.2" /db_xref="GI:145698237" /db_xref="ASAP:ABE-0003223" /db_xref="UniProtKB/Swiss-Prot:P0AB10" /db_xref="ECOCYC:G6492" /db_xref="EcoGene:EG13719" /db_xref="GeneID:946972" /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW VVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG YDEMVKVLAGVWSQEAASIAQEIKRLP" gene 1014938..1015105 /gene="rmf" /locus_tag="b0953" /gene_synonym="ECK0944; JW0936" /db_xref="ECOCYC:EG50004" /db_xref="EcoGene:EG50004" /db_xref="GeneID:945567" CDS 1014938..1015105 /gene="rmf" /locus_tag="b0953" /gene_synonym="ECK0944; JW0936" /function="factor; Ribosomes - maturation and modification" /experiment="N-terminus verified by Edman degradation: PMID 2181444" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="ribosome modulation factor" /protein_id="NP_415473.1" /db_xref="GI:16128920" /db_xref="ASAP:ABE-0003227" /db_xref="UniProtKB/Swiss-Prot:P0AFW2" /db_xref="ECOCYC:EG50004" /db_xref="EcoGene:EG50004" /db_xref="GeneID:945567" /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW REAMADRVVMA" gene complement(1015175..1015693) /gene="fabA" /locus_tag="b0954" /gene_synonym="ECK0945; JW0937" /db_xref="ECOCYC:EG10273" /db_xref="EcoGene:EG10273" /db_xref="GeneID:945568" CDS complement(1015175..1015693) /gene="fabA" /locus_tag="b0954" /gene_synonym="ECK0945; JW0937" /EC_number="4.2.1.60" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 2832401" /note="beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase" /codon_start=1 /transl_table=11 /product="beta-hydroxydecanoyl thioester dehydrase" /protein_id="NP_415474.1" /db_xref="GI:16128921" /db_xref="ASAP:ABE-0003229" /db_xref="UniProtKB/Swiss-Prot:P0A6Q3" /db_xref="ECOCYC:EG10273" /db_xref="EcoGene:EG10273" /db_xref="GeneID:945568" /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD LKVGLFQDTSAF" gene complement(1015762..1017522) /gene="ycbZ" /locus_tag="b0955" /gene_synonym="ECK0946; JW0938" /db_xref="ECOCYC:G6493" /db_xref="EcoGene:EG13718" /db_xref="GeneID:945569" CDS complement(1015762..1017522) /gene="ycbZ" /locus_tag="b0955" /gene_synonym="ECK0946; JW0938" /function="putative enzyme; Not classified" /GO_process="GO:0006508 - proteolysis" /note="putative ATP-dependent protease" /codon_start=1 /transl_table=11 /product="predicted peptidase" /protein_id="NP_415475.1" /db_xref="GI:16128922" /db_xref="ASAP:ABE-0003233" /db_xref="UniProtKB/Swiss-Prot:P75867" /db_xref="ECOCYC:G6493" /db_xref="EcoGene:EG13718" /db_xref="GeneID:945569" /translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF ALEQLLHTRASSSFMLAKAPEESEYLNLIANAARTLQSDAGQLVGGHYEVSGHSIRLR HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE MEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARHNHLPAPGADAWPILIREAA RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ QEGRHRFPWPLRWLNWFIPN" gene 1017708..1018160 /gene="matP" /locus_tag="b0956" /gene_synonym="ECK0947; JW0939; ycbG" /db_xref="ECOCYC:EG12855" /db_xref="EcoGene:EG12855" /db_xref="GeneID:945570" CDS 1017708..1018160 /gene="matP" /locus_tag="b0956" /gene_synonym="ECK0947; JW0939; ycbG" /function="factor; DNA - replication, repair, restriction/modification" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="Ter macrodomain organizer matS-binding protein" /protein_id="NP_415476.1" /db_xref="GI:16128923" /db_xref="ASAP:ABE-0003238" /db_xref="UniProtKB/Swiss-Prot:P0A8N0" /db_xref="ECOCYC:EG12855" /db_xref="EcoGene:EG12855" /db_xref="GeneID:945570" /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE" gene complement(1018236..1019276) /gene="ompA" /locus_tag="b0957" /gene_synonym="con; ECK0948; JW0940; tolG; tut" /db_xref="ECOCYC:EG10669" /db_xref="EcoGene:EG10669" /db_xref="GeneID:945571" CDS complement(1018236..1019276) /gene="ompA" /locus_tag="b0957" /gene_synonym="con; ECK0948; JW0940; tolG; tut" /function="membrane; Outer membrane constituents" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="outer membrane protein 3a (II*;G;d)" /codon_start=1 /transl_table=11 /product="outer membrane protein A (3a;II*;G;d)" /protein_id="NP_415477.1" /db_xref="GI:16128924" /db_xref="ASAP:ABE-0003240" /db_xref="UniProtKB/Swiss-Prot:P0A910" /db_xref="ECOCYC:EG10669" /db_xref="EcoGene:EG10669" /db_xref="GeneID:945571" /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF INNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA KLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRL EYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLK SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER RAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV KGIKDVVTQPQA" mat_peptide complement(1018239..1019213) /gene="ompA" /locus_tag="b0957" /gene_synonym="con; ECK0948; JW0940; tolG; tut" /product="outer membrane protein A (3a;II*;G;d)" /experiment="N-terminus verified by Edman degradation: PMID 340230,7001461,8740179,9298646,9629924" gene complement(1019633..1020142) /gene="sulA" /locus_tag="b0958" /gene_synonym="ECK0949; JW0941; sfiA" /db_xref="ECOCYC:EG10984" /db_xref="EcoGene:EG10984" /db_xref="GeneID:947335" CDS complement(1019633..1020142) /gene="sulA" /locus_tag="b0958" /gene_synonym="ECK0949; JW0941; sfiA" /function="phenotype; Cell division" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006281 - DNA repair; GO:0009432 - SOS response" /note="suppressor of lon; inhibits cell division and ftsZ ring formation" /codon_start=1 /transl_table=11 /product="SOS cell division inhibitor" /protein_id="NP_415478.1" /db_xref="GI:16128925" /db_xref="ASAP:ABE-0003244" /db_xref="UniProtKB/Swiss-Prot:P0AFZ5" /db_xref="ECOCYC:EG10984" /db_xref="EcoGene:EG10984" /db_xref="GeneID:947335" /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG LKIHSNLYH" gene 1020361..1020990 /gene="sxy" /locus_tag="b0959" /gene_synonym="ECK0950; JW0942; tfoX; yccR" /db_xref="ECOCYC:G6494" /db_xref="EcoGene:EG13720" /db_xref="GeneID:946504" CDS 1020361..1020990 /gene="sxy" /locus_tag="b0959" /gene_synonym="ECK0950; JW0942; tfoX; yccR" /codon_start=1 /transl_table=11 /product="required for expression of CRP-S-dependent promoters" /protein_id="NP_415479.1" /db_xref="GI:16128926" /db_xref="ASAP:ABE-0003249" /db_xref="UniProtKB/Swiss-Prot:P75869" /db_xref="ECOCYC:G6494" /db_xref="EcoGene:EG13720" /db_xref="GeneID:946504" /translation="MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS LDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE" gene complement(1020953..1023106) /gene="yccS" /locus_tag="b0960" /gene_synonym="ECK0951; JW5128" /db_xref="ECOCYC:G6495" /db_xref="EcoGene:EG13721" /db_xref="GeneID:947001" CDS complement(1020953..1023106) /gene="yccS" /locus_tag="b0960" /gene_synonym="ECK0951; JW5128" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="NP_415480.2" /db_xref="GI:90111194" /db_xref="ASAP:ABE-0003251" /db_xref="UniProtKB/Swiss-Prot:P75870" /db_xref="ECOCYC:G6495" /db_xref="EcoGene:EG13721" /db_xref="GeneID:947001" /translation="MLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPL TLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLSTSGF ILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIGHLL FPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDQSQAPLYDLALANGLLMATLNQTK LSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFRFQR LMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTLGFL LNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESALFR HAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLVGIA IGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEGFEV ALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQGRD NRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYISALG AHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRADSKE PLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA" gene complement(1023125..1023571) /gene="yccF" /locus_tag="b0961" /gene_synonym="ECK0952; JW0944" /db_xref="ECOCYC:G6496" /db_xref="EcoGene:EG12306" /db_xref="GeneID:945594" CDS complement(1023125..1023571) /gene="yccF" /locus_tag="b0961" /gene_synonym="ECK0952; JW0944" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF307 family" /protein_id="NP_415481.1" /db_xref="GI:16128928" /db_xref="ASAP:ABE-0003253" /db_xref="UniProtKB/Swiss-Prot:P0AB12" /db_xref="ECOCYC:G6496" /db_xref="EcoGene:EG12306" /db_xref="GeneID:945594" /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE" gene 1023694..1025748 /gene="helD" /locus_tag="b0962" /gene_synonym="ECK0953; JW0945; srjB" /db_xref="ECOCYC:EG10426" /db_xref="EcoGene:EG10426" /db_xref="GeneID:946227" CDS 1023694..1025748 /gene="helD" /locus_tag="b0962" /gene_synonym="ECK0953; JW0945; srjB" /EC_number="3.6.1.-" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 2542273" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA helicase IV" /protein_id="NP_415482.1" /db_xref="GI:16128929" /db_xref="ASAP:ABE-0003257" /db_xref="UniProtKB/Swiss-Prot:P15038" /db_xref="ECOCYC:EG10426" /db_xref="EcoGene:EG10426" /db_xref="GeneID:946227" /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQ AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR KP" gene complement(1025780..1026238) /gene="mgsA" /locus_tag="b0963" /gene_synonym="ECK0954; JW5129; mgs; yccG" /db_xref="ECOCYC:G6497" /db_xref="EcoGene:EG12307" /db_xref="GeneID:945574" CDS complement(1025780..1026238) /gene="mgsA" /locus_tag="b0963" /gene_synonym="ECK0954; JW5129; mgs; yccG" /EC_number="4.2.3.3" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 9489667,9665712" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009438 - methylglyoxal metabolic process" /codon_start=1 /transl_table=11 /product="methylglyoxal synthase" /protein_id="NP_415483.2" /db_xref="GI:90111195" /db_xref="ASAP:ABE-0003259" /db_xref="UniProtKB/Swiss-Prot:P0A731" /db_xref="ECOCYC:G6497" /db_xref="EcoGene:EG12307" /db_xref="GeneID:945574" /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK" gene complement(1026334..1026996) /gene="yccT" /locus_tag="b0964" /gene_synonym="ECK0955; JW0947" /db_xref="ECOCYC:G6498" /db_xref="EcoGene:EG13722" /db_xref="GeneID:945577" CDS complement(1026334..1026996) /gene="yccT" /locus_tag="b0964" /gene_synonym="ECK0955; JW0947" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415484.1" /db_xref="GI:16128931" /db_xref="ASAP:ABE-0003262" /db_xref="UniProtKB/Swiss-Prot:P0A8X4" /db_xref="ECOCYC:G6498" /db_xref="EcoGene:EG13722" /db_xref="GeneID:945577" /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP SS" gene 1027169..1027582 /gene="yccU" /locus_tag="b0965" /gene_synonym="ECK0956; JW5130" /db_xref="ECOCYC:G6499" /db_xref="EcoGene:EG13723" /db_xref="GeneID:949008" CDS 1027169..1027582 /gene="yccU" /locus_tag="b0965" /gene_synonym="ECK0956; JW5130" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /codon_start=1 /transl_table=11 /product="predicted CoA-binding protein with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415485.4" /db_xref="GI:90111196" /db_xref="ASAP:ABE-0003267" /db_xref="UniProtKB/Swiss-Prot:P75874" /db_xref="ECOCYC:G6499" /db_xref="EcoGene:EG13723" /db_xref="GeneID:949008" /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI PVSPKVAGKTLLGQKGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK" repeat_region 1027589..1027612 /note="REP88 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1027627..1027944) /gene="hspQ" /locus_tag="b0966" /gene_synonym="ECK0957; JW5970; yccV" /db_xref="ECOCYC:G6500" /db_xref="EcoGene:EG13724" /db_xref="GeneID:945578" CDS complement(1027627..1027944) /gene="hspQ" /locus_tag="b0966" /gene_synonym="ECK0957; JW5970; yccV" /experiment="N-terminus verified by Edman degradation: PMID 15569148" /codon_start=1 /transl_table=11 /product="heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein" /protein_id="NP_415486.4" /db_xref="GI:145698238" /db_xref="ASAP:ABE-0003269" /db_xref="UniProtKB/Swiss-Prot:P0AB20" /db_xref="ECOCYC:G6500" /db_xref="EcoGene:EG13724" /db_xref="GeneID:945578" /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR LRN" gene complement(1028002..1029192) /gene="rlmI" /locus_tag="b0967" /gene_synonym="ECK0958; JW5898; yccW" /db_xref="ECOCYC:G6501" /db_xref="EcoGene:EG13725" /db_xref="GeneID:946691" CDS complement(1028002..1029192) /gene="rlmI" /locus_tag="b0967" /gene_synonym="ECK0958; JW5898; yccW" /function="enzyme; tRNA modification" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="23S rRNA m(5)C1962 methyltransferase, SAM-dependent" /protein_id="NP_415487.4" /db_xref="GI:145698239" /db_xref="ASAP:ABE-0003272" /db_xref="UniProtKB/Swiss-Prot:P75876" /db_xref="ECOCYC:G6501" /db_xref="EcoGene:EG13725" /db_xref="GeneID:946691" /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVA VRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA CRVM" gene 1029287..1029565 /gene="yccX" /locus_tag="b0968" /gene_synonym="ECK0959; JW5131" /db_xref="ECOCYC:G6502" /db_xref="EcoGene:EG13726" /db_xref="GeneID:945304" CDS 1029287..1029565 /gene="yccX" /locus_tag="b0968" /gene_synonym="ECK0959; JW5131" /codon_start=1 /transl_table=11 /product="weak acylphosphatase" /protein_id="NP_415488.1" /db_xref="GI:16128935" /db_xref="ASAP:ABE-0003276" /db_xref="UniProtKB/Swiss-Prot:P0AB65" /db_xref="ECOCYC:G6502" /db_xref="EcoGene:EG13726" /db_xref="GeneID:945304" /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR" gene complement(1029562..1029891) /gene="yccK" /locus_tag="b0969" /gene_synonym="ECK0960; JW0952; tusE" /db_xref="ECOCYC:EG12876" /db_xref="EcoGene:EG12876" /db_xref="GeneID:945023" CDS complement(1029562..1029891) /gene="yccK" /locus_tag="b0969" /gene_synonym="ECK0960; JW0952; tusE" /function="orf; Not classified" /note="putative sulfite reductase" /codon_start=1 /transl_table=11 /product="sulfurtransferase required for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis" /protein_id="NP_415489.4" /db_xref="GI:90111197" /db_xref="ASAP:ABE-0003278" /db_xref="UniProtKB/Swiss-Prot:P0AB18" /db_xref="ECOCYC:EG12876" /db_xref="EcoGene:EG12876" /db_xref="GeneID:945023" /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL PKPVKCI" gene complement(1029982..1030641) /gene="yccA" /locus_tag="b0970" /gene_synonym="ECK0961; JW0953" /db_xref="ECOCYC:EG11113" /db_xref="EcoGene:EG11113" /db_xref="GeneID:946016" CDS complement(1029982..1030641) /gene="yccA" /locus_tag="b0970" /gene_synonym="ECK0961; JW0953" /function="putative transport; Not classified" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /note="putative carrier/transport protein" /codon_start=1 /transl_table=11 /product="HflBKC-binding inner membrane protein, UPF0005 family" /protein_id="NP_415490.1" /db_xref="GI:16128937" /db_xref="ASAP:ABE-0003280" /db_xref="UniProtKB/Swiss-Prot:P0AAC6" /db_xref="ECOCYC:EG11113" /db_xref="EcoGene:EG11113" /db_xref="GeneID:946016" /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL HLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR D" gene complement(1030848..1030935) /gene="serT" /locus_tag="b0971" /gene_synonym="divE; ECK0962; JWR0026" /db_xref="ECOCYC:EG30093" /db_xref="EcoGene:EG30093" /db_xref="GeneID:944826" tRNA complement(1030848..1030935) /gene="serT" /locus_tag="b0971" /gene_synonym="divE; ECK0962; JWR0026" /product="tRNA-Ser" /note="anticodon: UGA" /db_xref="ASAP:ABE-0003283" /db_xref="ECOCYC:EG30093" /db_xref="EcoGene:EG30093" /db_xref="GeneID:944826" gene 1031362..1032480 /gene="hyaA" /locus_tag="b0972" /gene_synonym="ECK0963; JW0954" /db_xref="ECOCYC:EG10468" /db_xref="EcoGene:EG10468" /db_xref="GeneID:945579" CDS 1031362..1032480 /gene="hyaA" /locus_tag="b0972" /gene_synonym="ECK0963; JW0954" /EC_number="1.12.99.6" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0019866 - organelle inner membrane" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration" /note="hydrogenase-1 small subunit" /codon_start=1 /transl_table=11 /product="hydrogenase 1, small subunit" /protein_id="NP_415491.1" /db_xref="GI:16128938" /db_xref="ASAP:ABE-0003286" /db_xref="UniProtKB/Swiss-Prot:P69739" /db_xref="ECOCYC:EG10468" /db_xref="EcoGene:EG10468" /db_xref="GeneID:945579" /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA" mat_peptide 1031497..1032477 /gene="hyaA" /locus_tag="b0972" /gene_synonym="ECK0963; JW0954" /product="hydrogenase 1, small subunit" /experiment="N-terminus verified by Edman degradation: PMID 2180913" gene 1032477..1034270 /gene="hyaB" /locus_tag="b0973" /gene_synonym="ECK0964; JW0955" /db_xref="ECOCYC:EG10469" /db_xref="EcoGene:EG10469" /db_xref="GeneID:945580" CDS 1032477..1034270 /gene="hyaB" /locus_tag="b0973" /gene_synonym="ECK0964; JW0955" /EC_number="1.12.99.6" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 2180913" /GO_component="GO:0019866 - organelle inner membrane" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration" /note="hydrogenase-1 large subunit" /codon_start=1 /transl_table=11 /product="hydrogenase 1, large subunit" /protein_id="NP_415492.1" /db_xref="GI:16128939" /db_xref="ASAP:ABE-0003288" /db_xref="UniProtKB/Swiss-Prot:P0ACD8" /db_xref="ECOCYC:EG10469" /db_xref="EcoGene:EG10469" /db_xref="GeneID:945580" /translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNV LPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI LRTLHSFDPCLACSTHVLGDDGSELISVQVR" gene 1034289..1034996 /gene="hyaC" /locus_tag="b0974" /gene_synonym="ECK0965; JW0956" /db_xref="ECOCYC:EG10470" /db_xref="EcoGene:EG10470" /db_xref="GeneID:945581" CDS 1034289..1034996 /gene="hyaC" /locus_tag="b0974" /gene_synonym="ECK0965; JW0956" /function="putative enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration; GO:0017004 - cytochrome complex assembly" /note="probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit" /codon_start=1 /transl_table=11 /product="hydrogenase 1, b-type cytochrome subunit" /protein_id="NP_415493.1" /db_xref="GI:16128940" /db_xref="ASAP:ABE-0003290" /db_xref="UniProtKB/Swiss-Prot:P0AAM1" /db_xref="ECOCYC:EG10470" /db_xref="EcoGene:EG10470" /db_xref="GeneID:945581" /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMV NGYRSHKFGKISNKERS" gene 1034993..1035580 /gene="hyaD" /locus_tag="b0975" /gene_synonym="ECK0966; JW0957" /db_xref="ECOCYC:EG10471" /db_xref="EcoGene:EG10471" /db_xref="GeneID:945575" CDS 1034993..1035580 /gene="hyaD" /locus_tag="b0975" /gene_synonym="ECK0966; JW0957" /function="factor; Energy metabolism, carbon: Aerobic respiration" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration; GO:0006457 - protein folding" /note="processing of HyaA and HyaB proteins" /codon_start=1 /transl_table=11 /product="protein involved in processing of HyaA and HyaB proteins" /protein_id="NP_415494.1" /db_xref="GI:16128941" /db_xref="ASAP:ABE-0003292" /db_xref="UniProtKB/Swiss-Prot:P19930" /db_xref="ECOCYC:EG10471" /db_xref="EcoGene:EG10471" /db_xref="GeneID:945575" /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLPAAEQAALAQLAAWGIVP QPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG" gene 1035577..1035975 /gene="hyaE" /locus_tag="b0976" /gene_synonym="ECK0967; JW0958" /db_xref="ECOCYC:EG10472" /db_xref="EcoGene:EG10472" /db_xref="GeneID:945573" CDS 1035577..1035975 /gene="hyaE" /locus_tag="b0976" /gene_synonym="ECK0967; JW0958" /function="factor; Energy metabolism, carbon: Aerobic respiration" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration; GO:0006457 - protein folding" /note="processing of HyaA and HyaB proteins" /codon_start=1 /transl_table=11 /product="protein involved in processing of HyaA and HyaB proteins" /protein_id="NP_415495.1" /db_xref="GI:16128942" /db_xref="ASAP:ABE-0003294" /db_xref="UniProtKB/Swiss-Prot:P19931" /db_xref="ECOCYC:EG10472" /db_xref="EcoGene:EG10472" /db_xref="GeneID:945573" /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD PKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGN YRGVLNGIHPWAELINLMRGLVEPQQERAS" gene 1035972..1036829 /gene="hyaF" /locus_tag="b0977" /gene_synonym="ECK0968; JW0959" /db_xref="ECOCYC:EG10473" /db_xref="EcoGene:EG10473" /db_xref="GeneID:945572" CDS 1035972..1036829 /gene="hyaF" /locus_tag="b0977" /gene_synonym="ECK0968; JW0959" /function="phenotype; Energy metabolism, carbon: Aerobic respiration" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration; GO:0006457 - protein folding" /note="nickel incorporation into hydrogenase-1 proteins" /codon_start=1 /transl_table=11 /product="protein involved in nickel incorporation into hydrogenase-1 proteins" /protein_id="NP_415496.1" /db_xref="GI:16128943" /db_xref="ASAP:ABE-0003296" /db_xref="UniProtKB/Swiss-Prot:P19932" /db_xref="ECOCYC:EG10473" /db_xref="EcoGene:EG10473" /db_xref="GeneID:945572" /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA DDSESEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC QWLAEAAPT" gene 1036963..1038507 /gene="appC" /locus_tag="b0978" /gene_synonym="cbdA; cyxA; ECK0969; JW0960" /db_xref="ECOCYC:EG11380" /db_xref="EcoGene:EG11380" /db_xref="GeneID:945585" CDS 1036963..1038507 /gene="appC" /locus_tag="b0978" /gene_synonym="cbdA; cyxA; ECK0969; JW0960" /EC_number="1.10.3.-" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /GO_component="GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cytochrome bd-II oxidase, subunit I" /protein_id="NP_415497.1" /db_xref="GI:16128944" /db_xref="ASAP:ABE-0003300" /db_xref="UniProtKB/Swiss-Prot:P26459" /db_xref="ECOCYC:EG11380" /db_xref="EcoGene:EG11380" /db_xref="GeneID:945585" /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALM AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALR SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE QDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG NREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ PTQQQG" gene 1038519..1039655 /gene="appB" /locus_tag="b0979" /gene_synonym="cbdB; cyxB; ECK0970; JW0961" /db_xref="ECOCYC:EG11379" /db_xref="EcoGene:EG11379" /db_xref="GeneID:947547" CDS 1038519..1039655 /gene="appB" /locus_tag="b0979" /gene_synonym="cbdB; cyxB; ECK0970; JW0961" /EC_number="1.10.3.-" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="probable third cytochrome oxidase, subunit II" /codon_start=1 /transl_table=11 /product="cytochrome bd-II oxidase, subunit II" /protein_id="NP_415498.1" /db_xref="GI:16128945" /db_xref="ASAP:ABE-0003302" /db_xref="UniProtKB/Swiss-Prot:P26458" /db_xref="ECOCYC:EG11379" /db_xref="EcoGene:EG11379" /db_xref="GeneID:947547" /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLA GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY" gene 1039668..1039760 /gene="yccB" /locus_tag="b4592" /gene_synonym="ECK4402" /db_xref="ECOCYC:G0-10588" /db_xref="EcoGene:EG11114" /db_xref="GeneID:948955" CDS 1039668..1039760 /gene="yccB" /locus_tag="b4592" /gene_synonym="ECK4402" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001165313.1" /db_xref="GI:145698240" /db_xref="UniProtKB/Swiss-Prot:P24244" /db_xref="ECOCYC:G0-10588" /db_xref="EcoGene:EG11114" /db_xref="GeneID:948955" /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS" repeat_region 1039766..1039801 /note="REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1039840..1041138 /gene="appA" /locus_tag="b0980" /gene_synonym="ECK0971; JW0963" /db_xref="ECOCYC:EG10049" /db_xref="EcoGene:EG10049" /db_xref="GeneID:946206" CDS 1039840..1041138 /gene="appA" /locus_tag="b0980" /gene_synonym="ECK0971; JW0963" /EC_number="3.1.3.26" /EC_number="3.1.3.2" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006793 - phosphorus metabolic process; GO:0042594 - response to starvation" /note="phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic" /codon_start=1 /transl_table=11 /product="phosphoanhydride phosphorylase" /protein_id="NP_415500.1" /db_xref="GI:16128946" /db_xref="ASAP:ABE-0003305" /db_xref="UniProtKB/Swiss-Prot:P07102" /db_xref="ECOCYC:EG10049" /db_xref="EcoGene:EG10049" /db_xref="GeneID:946206" /translation="MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAP TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQS GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF YLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL" mat_peptide 1039906..1041135 /gene="appA" /locus_tag="b0980" /gene_synonym="ECK0971; JW0963" /product="phosphoanhydride phosphorylase" /experiment="N-terminus verified by Edman degradation: PMID 2168385,8387749,10696472" repeat_region 1041208..1041241 /note="REP90 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1041253..1043433) /gene="etk" /locus_tag="b0981" /gene_synonym="ECK0972; JW0964; yccC" /db_xref="ECOCYC:EG11826" /db_xref="EcoGene:EG11826" /db_xref="GeneID:947409" CDS complement(1041253..1043433) /gene="etk" /locus_tag="b0981" /gene_synonym="ECK0972; JW0964; yccC" /EC_number="2.7.10.2" /experiment="N-terminus verified by Edman degradation: PMID 10369665" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="cryptic autophosphorylating protein tyrosine kinase Etk" /protein_id="NP_415501.1" /db_xref="GI:16128947" /db_xref="ASAP:ABE-0003309" /db_xref="UniProtKB/Swiss-Prot:P38134" /db_xref="ECOCYC:EG11826" /db_xref="EcoGene:EG11826" /db_xref="GeneID:947409" /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK TIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE" gene complement(1043453..1043899) /gene="etp" /locus_tag="b0982" /gene_synonym="ECK0973; JW5132; yccY" /db_xref="ECOCYC:G6503" /db_xref="EcoGene:EG13727" /db_xref="GeneID:945236" CDS complement(1043453..1043899) /gene="etp" /locus_tag="b0982" /gene_synonym="ECK0973; JW5132; yccY" /function="putative enzyme; Not classified" /GO_process="GO:0006464 - protein modification process" /note="putative phosphatase" /codon_start=1 /transl_table=11 /product="phosphotyrosine-protein phosphatase" /protein_id="NP_415502.4" /db_xref="GI:90111198" /db_xref="ASAP:ABE-0003312" /db_xref="UniProtKB/Swiss-Prot:P0ACZ2" /db_xref="ECOCYC:G6503" /db_xref="EcoGene:EG13727" /db_xref="GeneID:945236" /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR" gene complement(1043887..1045026) /gene="gfcE" /locus_tag="b0983" /gene_synonym="ECK0974; JW0966; yccZ" /db_xref="ECOCYC:G6504" /db_xref="EcoGene:EG13728" /db_xref="GeneID:945586" CDS complement(1043887..1045026) /gene="gfcE" /locus_tag="b0983" /gene_synonym="ECK0974; JW0966; yccZ" /function="phenotype; Not classified" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative function in exopolysaccharide production" /codon_start=1 /transl_table=11 /product="lipoprotein required for formation of the O-antigen capsule, predicted exopolysaccharide export protein" /protein_id="NP_415503.1" /db_xref="GI:16128949" /db_xref="ASAP:ABE-0003317" /db_xref="UniProtKB/Swiss-Prot:P0A932" /db_xref="ECOCYC:G6504" /db_xref="EcoGene:EG13728" /db_xref="GeneID:945586" /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQY DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN" gene complement(1045072..1047168) /gene="gfcD" /locus_tag="b0984" /gene_synonym="ECK0975; JW0967; ymcA" /db_xref="ECOCYC:G6505" /db_xref="EcoGene:EG13729" /db_xref="GeneID:945588" CDS complement(1045072..1047168) /gene="gfcD" /locus_tag="b0984" /gene_synonym="ECK0975; JW0967; ymcA" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415504.1" /db_xref="GI:16128950" /db_xref="ASAP:ABE-0003319" /db_xref="UniProtKB/Swiss-Prot:P75882" /db_xref="ECOCYC:G6505" /db_xref="EcoGene:EG13729" /db_xref="GeneID:945588" /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMS GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG TAPGQSEPLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDACWALGVDVNYVKQRDWD NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK YQLYPMTAEREVPVGQ" gene complement(1047168..1047914) /gene="gfcC" /locus_tag="b0985" /gene_synonym="ECK0976; JW0968; ymcB" /db_xref="ECOCYC:G6506" /db_xref="EcoGene:EG13730" /db_xref="GeneID:944978" CDS complement(1047168..1047914) /gene="gfcC" /locus_tag="b0985" /gene_synonym="ECK0976; JW0968; ymcB" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415505.1" /db_xref="GI:16128951" /db_xref="ASAP:ABE-0003321" /db_xref="UniProtKB/Swiss-Prot:P75883" /db_xref="ECOCYC:G6506" /db_xref="EcoGene:EG13730" /db_xref="GeneID:944978" /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVEN VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL WLGFSAHVLPEKYADLNDQIVSVLTQRVPD" gene complement(1047911..1048555) /gene="gfcB" /locus_tag="b0986" /gene_synonym="ECK0977; JW0969; ymcC" /db_xref="ECOCYC:G6507" /db_xref="EcoGene:EG13731" /db_xref="GeneID:949118" CDS complement(1047911..1048555) /gene="gfcB" /locus_tag="b0986" /gene_synonym="ECK0977; JW0969; ymcC" /function="putative regulator; Not classified" /note="putative regulator" /codon_start=1 /transl_table=11 /product="predicted outer membrane lipoprotein" /protein_id="NP_415506.1" /db_xref="GI:16128952" /db_xref="ASAP:ABE-0003323" /db_xref="UniProtKB/Swiss-Prot:P75884" /db_xref="ECOCYC:G6507" /db_xref="EcoGene:EG13731" /db_xref="GeneID:949118" /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP" gene complement(1048662..1048967) /gene="gfcA" /locus_tag="b0987" /gene_synonym="ECK0978; JW5133; ymcD" /db_xref="ECOCYC:G6508" /db_xref="EcoGene:EG13732" /db_xref="GeneID:945029" CDS complement(1048662..1048967) /gene="gfcA" /locus_tag="b0987" /gene_synonym="ECK0978; JW5133; ymcD" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415507.2" /db_xref="GI:90111199" /db_xref="ASAP:ABE-0003325" /db_xref="UniProtKB/Swiss-Prot:P75885" /db_xref="ECOCYC:G6508" /db_xref="EcoGene:EG13732" /db_xref="GeneID:945029" /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR" repeat_region 1049001..1049768 /mobile_element="insertion sequence:IS1D" gene 1049056..1049331 /gene="insA" /locus_tag="b4516" /gene_synonym="ECK0023" /db_xref="ECOCYC:G0-10430" /db_xref="EcoGene:EG40001" /db_xref="GeneID:1450250" CDS 1049056..1049331 /gene="insA" /locus_tag="b4516" /gene_synonym="ECK0023" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 repressor TnpA" /protein_id="YP_588445.1" /db_xref="GI:94541103" /db_xref="ASAP:ABE-0285037" /db_xref="ECOCYC:G0-10430" /db_xref="EcoGene:EG40001" /db_xref="GeneID:1450250" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" gene 1049250..1049753 /gene="insB" /locus_tag="b0988" /gene_synonym="ECK0022" /db_xref="ECOCYC:G6509" /db_xref="EcoGene:EG40002" /db_xref="GeneID:945009" CDS 1049250..1049753 /gene="insB" /locus_tag="b0988" /gene_synonym="ECK0022" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 transposase B" /protein_id="NP_415508.1" /db_xref="GI:16128954" /db_xref="ASAP:ABE-0003338" /db_xref="ECOCYC:G6509" /db_xref="EcoGene:EG40002" /db_xref="GeneID:945009" /translation="MPGNSPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERYNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene complement(1050186..1050398) /gene="cspH" /locus_tag="b0989" /gene_synonym="cspK; ECK0979; JW5134" /db_xref="ECOCYC:G6510" /db_xref="EcoGene:EG14281" /db_xref="GeneID:945590" CDS complement(1050186..1050398) /gene="cspH" /locus_tag="b0989" /gene_synonym="cspK; ECK0979; JW5134" /function="phenotype; Not classified" /GO_process="GO:0009266 - response to temperature stimulus" /note="cold shock-like protein" /codon_start=1 /transl_table=11 /product="stress protein, member of the CspA-family" /protein_id="NP_415509.1" /db_xref="GI:16128955" /db_xref="ASAP:ABE-0003341" /db_xref="UniProtKB/Swiss-Prot:P0A982" /db_xref="ECOCYC:G6510" /db_xref="EcoGene:EG14281" /db_xref="GeneID:945590" /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV LIPGLRVEFCRVNGLRGPTAANVYLS" gene 1050684..1050896 /gene="cspG" /locus_tag="b0990" /gene_synonym="cspI; ECK0980; JW0974" /db_xref="ECOCYC:G6511" /db_xref="EcoGene:EG14243" /db_xref="GeneID:945591" CDS 1050684..1050896 /gene="cspG" /locus_tag="b0990" /gene_synonym="cspI; ECK0980; JW0974" /function="phenotype; Not classified" /GO_process="GO:0009266 - response to temperature stimulus" /note="homolog of Salmonella cold shock protein" /codon_start=1 /transl_table=11 /product="cold shock protein homolog, cold-inducible" /protein_id="NP_415510.1" /db_xref="GI:16128956" /db_xref="ASAP:ABE-0003346" /db_xref="UniProtKB/Swiss-Prot:P0A978" /db_xref="ECOCYC:G6511" /db_xref="EcoGene:EG14243" /db_xref="GeneID:945591" /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT LNENQKVEFSIEQGQRGPAAANVVTL" gene 1051070..1051300 /gene="ymcE" /locus_tag="b0991" /gene_synonym="ECK0981; JW0975; sfa" /db_xref="ECOCYC:G6512" /db_xref="EcoGene:EG13232" /db_xref="GeneID:946951" CDS 1051070..1051300 /gene="ymcE" /locus_tag="b0991" /gene_synonym="ECK0981; JW0975; sfa" /function="phenotype; Not classified" /note="suppresses fabA and ts growth mutation" /codon_start=1 /transl_table=11 /product="cold shock gene" /protein_id="NP_415511.1" /db_xref="GI:16128957" /db_xref="ASAP:ABE-0003349" /db_xref="UniProtKB/Swiss-Prot:P0AAA5" /db_xref="ECOCYC:G6512" /db_xref="EcoGene:EG13232" /db_xref="GeneID:946951" /translation="MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGEM AYNISYLTRVPGTNTLLACCCLLRPEEVNSEY" gene 1051290..1051463 /gene="gnsA" /locus_tag="b4517" /gene_synonym="ECK0982; JW0976; sfa; yccL" /db_xref="ECOCYC:G0-9662" /db_xref="EcoGene:EG13233" /db_xref="GeneID:1450249" CDS 1051290..1051463 /gene="gnsA" /locus_tag="b4517" /gene_synonym="ECK0982; JW0976; sfa; yccL" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="Multicopy suppressor of secG(Cs) and fabA6(Ts); predicted regulator of phosphatidylethanolamine synthesis" /protein_id="YP_588446.1" /db_xref="GI:94541104" /db_xref="ASAP:ABE-0285038" /db_xref="UniProtKB/Swiss-Prot:P0AC92" /db_xref="ECOCYC:G0-9662" /db_xref="EcoGene:EG13233" /db_xref="GeneID:1450249" /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM TGLESYDVKIKIM" gene complement(1051512..1052585) /gene="yccM" /locus_tag="b0992" /gene_synonym="ECK0983; JW0977" /db_xref="ECOCYC:G6513" /db_xref="EcoGene:EG13234" /db_xref="GeneID:946295" CDS complement(1051512..1052585) /gene="yccM" /locus_tag="b0992" /gene_synonym="ECK0983; JW0977" /codon_start=1 /transl_table=11 /product="predicted 4Fe-4S membrane protein" /protein_id="NP_415512.1" /db_xref="GI:16128958" /db_xref="ASAP:ABE-0003351" /db_xref="UniProtKB/Swiss-Prot:P52636" /db_xref="ECOCYC:G6513" /db_xref="EcoGene:EG13234" /db_xref="GeneID:946295" /translation="MAENKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLAMNI YIAITFWYWVRYYETASSTTFVARPGGIEGWLPIAGLMNLKYSLVTGQLPSVHAAAML LLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYL LLSFFIYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFI RHAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKNCPSRIPVDKLIQVRTV ECTGCMTCVESCPVASTLTFSLQKPAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAG VWQSPVPEELYRRLIPQAPMIGH" gene complement(1052657..1055401) /gene="torS" /locus_tag="b0993" /gene_synonym="ECK0984; JW5135; yccI" /db_xref="ECOCYC:G6514" /db_xref="EcoGene:EG12617" /db_xref="GeneID:945595" CDS complement(1052657..1055401) /gene="torS" /locus_tag="b0993" /gene_synonym="ECK0984; JW5135; yccI" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009061 - anaerobic respiration; GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="hybrid sensory histidine kinase in two-component regulatory system with TorR" /protein_id="NP_415513.2" /db_xref="GI:90111200" /db_xref="ASAP:ABE-0003354" /db_xref="UniProtKB/Swiss-Prot:P39453" /db_xref="ECOCYC:G6514" /db_xref="EcoGene:EG12617" /db_xref="GeneID:945595" /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ GFDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQAN NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM NLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG RLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPCALMGDPRRIRQVI TNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL RLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDID GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK RAAHQLKSSCSSLGMHIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI" gene 1055484..1056512 /gene="torT" /locus_tag="b0994" /gene_synonym="ECK0985; JW0979; yccH" /db_xref="ECOCYC:G6515" /db_xref="EcoGene:EG12616" /db_xref="GeneID:946289" CDS 1055484..1056512 /gene="torT" /locus_tag="b0994" /gene_synonym="ECK0985; JW0979; yccH" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009061 - anaerobic respiration; GO:0006464 - protein modification process" /note="part of regulation of tor operon, periplasmic" /codon_start=1 /transl_table=11 /product="periplasmic sensory protein associated with the TorRS two-component regulatory system" /protein_id="NP_415514.1" /db_xref="GI:16128960" /db_xref="ASAP:ABE-0003360" /db_xref="UniProtKB/Swiss-Prot:P38683" /db_xref="ECOCYC:G6515" /db_xref="EcoGene:EG12616" /db_xref="GeneID:946289" /translation="MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASTPLKAKRA WKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWG AEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQ WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQE MLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASD QMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFY QHTSAAKK" mat_peptide 1055538..1056509 /gene="torT" /locus_tag="b0994" /gene_synonym="ECK0985; JW0979; yccH" /product="periplasmic sensory protein associated with the TorRS two-component regulatory system" /experiment="N-terminus verified by Edman degradation: PMID 8576063" gene complement(1056485..1057177) /gene="torR" /locus_tag="b0995" /gene_synonym="ECK0986; JW0980" /db_xref="ECOCYC:EG12615" /db_xref="EcoGene:EG12615" /db_xref="GeneID:946182" CDS complement(1056485..1057177) /gene="torR" /locus_tag="b0995" /gene_synonym="ECK0986; JW0980" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 8083154" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0009061 - anaerobic respiration; GO:0006350 - transcription" /note="response transcriptional regulator for torA (sensor TorS)" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator in two-component regulatory system with TorS" /protein_id="NP_415515.1" /db_xref="GI:16128961" /db_xref="ASAP:ABE-0003362" /db_xref="UniProtKB/Swiss-Prot:P38684" /db_xref="ECOCYC:EG12615" /db_xref="EcoGene:EG12615" /db_xref="GeneID:946182" /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ HGEGYFLAADVC" gene 1057307..1058479 /gene="torC" /locus_tag="b0996" /gene_synonym="ECK0987; JW0981" /db_xref="ECOCYC:EG11815" /db_xref="EcoGene:EG11815" /db_xref="GeneID:946252" CDS 1057307..1058479 /gene="torC" /locus_tag="b0996" /gene_synonym="ECK0987; JW0981" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0042597 - periplasmic space" /GO_function="GO:0009055 - electron carrier activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0009061 - anaerobic respiration; GO:0017004 - cytochrome complex assembly; GO:0006350 - transcription" /note="trimethylamine N-oxide reductase, cytochrome c-type subunit" /codon_start=1 /transl_table=11 /product="trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit" /protein_id="NP_415516.1" /db_xref="GI:16128962" /db_xref="ASAP:ABE-0003370" /db_xref="UniProtKB/Swiss-Prot:P33226" /db_xref="ECOCYC:EG11815" /db_xref="EcoGene:EG11815" /db_xref="GeneID:946252" /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQM KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG APEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK" gene 1058479..1061025 /gene="torA" /locus_tag="b0997" /gene_synonym="ECK0988; JW0982" /db_xref="ECOCYC:EG11814" /db_xref="EcoGene:EG11814" /db_xref="GeneID:946267" CDS 1058479..1061025 /gene="torA" /locus_tag="b0997" /gene_synonym="ECK0988; JW0982" /EC_number="1.6.6.9" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009061 - anaerobic respiration" /note="trimethylamine N-oxide reductase subunit" /codon_start=1 /transl_table=11 /product="trimethylamine N-oxide (TMAO) reductase I, catalytic subunit" /protein_id="NP_415517.1" /db_xref="GI:16128963" /db_xref="ASAP:ABE-0003372" /db_xref="UniProtKB/Swiss-Prot:P33225" /db_xref="ECOCYC:EG11814" /db_xref="EcoGene:EG11814" /db_xref="GeneID:946267" /translation="MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAAT DAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRY PMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLV LQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTH EYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEK DGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLA AMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIP IARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVI AIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDI FRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFD HPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGG PGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDV VRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIG TSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS" mat_peptide 1058596..1061022 /gene="torA" /locus_tag="b0997" /gene_synonym="ECK0988; JW0982" /product="trimethylamine N-oxide (TMAO) reductase I, catalytic subunit" /experiment="N-terminus verified by Edman degradation: PMID 8039676" gene 1061022..1061621 /gene="torD" /locus_tag="b0998" /gene_synonym="ECK0989; JW0983" /db_xref="ECOCYC:EG12195" /db_xref="EcoGene:EG12195" /db_xref="GeneID:945625" CDS 1061022..1061621 /gene="torD" /locus_tag="b0998" /gene_synonym="ECK0989; JW0983" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /note="part of trimethylamine-N-oxide oxidoreductase" /codon_start=1 /transl_table=11 /product="chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I" /protein_id="NP_415518.1" /db_xref="GI:16128964" /db_xref="ASAP:ABE-0003374" /db_xref="UniProtKB/Swiss-Prot:P36662" /db_xref="ECOCYC:EG12195" /db_xref="EcoGene:EG12195" /db_xref="GeneID:945625" /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL KSEPPLTAAVNELENRIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA LWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR" repeat_region 1061630..1061763 /note="REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(1061773..1062078) /gene="cbpM" /locus_tag="b0999" /gene_synonym="ECK0990; JW0984; yccD" /db_xref="ECOCYC:EG12194" /db_xref="EcoGene:EG12194" /db_xref="GeneID:945597" CDS complement(1061773..1062078) /gene="cbpM" /locus_tag="b0999" /gene_synonym="ECK0990; JW0984; yccD" /codon_start=1 /transl_table=11 /product="modulator of CbpA co-chaperone" /protein_id="NP_415519.1" /db_xref="GI:16128965" /db_xref="ASAP:ABE-0003377" /db_xref="UniProtKB/Swiss-Prot:P63264" /db_xref="ECOCYC:EG12194" /db_xref="EcoGene:EG12194" /db_xref="GeneID:945597" /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP" gene complement(1062078..1062998) /gene="cbpA" /locus_tag="b1000" /gene_synonym="ECK0991; JW0985" /db_xref="ECOCYC:EG12193" /db_xref="EcoGene:EG12193" /db_xref="GeneID:947572" CDS complement(1062078..1062998) /gene="cbpA" /locus_tag="b1000" /gene_synonym="ECK0991; JW0985" /function="factor; Chaperones" /experiment="N-terminus verified by Edman degradation: PMID 8302830" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006457 - protein folding" /note="curved DNA-binding protein; functions closely related to DnaJ" /codon_start=1 /transl_table=11 /product="curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK" /protein_id="NP_415520.1" /db_xref="GI:16128966" /db_xref="ASAP:ABE-0003379" /db_xref="UniProtKB/Swiss-Prot:P36659" /db_xref="ECOCYC:EG12193" /db_xref="EcoGene:EG12193" /db_xref="GeneID:947572" /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF GQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP PKPDENTAALWQQLADAQSSFDPRKDWGKA" gene 1063259..1064515 /gene="yccE" /locus_tag="b1001" /gene_synonym="ECK0992; JW0986" /db_xref="ECOCYC:EG12196" /db_xref="EcoGene:EG12196" /db_xref="GeneID:947468" CDS 1063259..1064515 /gene="yccE" /locus_tag="b1001" /gene_synonym="ECK0992; JW0986" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415521.1" /db_xref="GI:16128967" /db_xref="ASAP:ABE-0003384" /db_xref="UniProtKB/Swiss-Prot:P36661" /db_xref="ECOCYC:EG12196" /db_xref="EcoGene:EG12196" /db_xref="GeneID:947468" /translation="MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVC FMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRILRTNDTQIYSGVSG GITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYNFMEYIENINACDDVFSEYCFD DENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAIL VLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQS DNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRI KAVKNFLVVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPP ELFAQAYKLNNKEMNAQLDYLNRYAI" gene 1064808..1066049 /gene="agp" /locus_tag="b1002" /gene_synonym="ECK0993; JW0987" /db_xref="ECOCYC:EG10033" /db_xref="EcoGene:EG10033" /db_xref="GeneID:945773" CDS 1064808..1066049 /gene="agp" /locus_tag="b1002" /gene_synonym="ECK0993; JW0987" /EC_number="3.1.3.10" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006006 - glucose metabolic process" /note="periplasmic glucose-1-phosphatase" /codon_start=1 /transl_table=11 /product="glucose-1-phosphatase/inositol phosphatase" /protein_id="NP_415522.1" /db_xref="GI:16128968" /db_xref="ASAP:ABE-0003388" /db_xref="UniProtKB/Swiss-Prot:P19926" /db_xref="ECOCYC:EG10033" /db_xref="EcoGene:EG10033" /db_xref="GeneID:945773" /translation="MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRA PLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECP PPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAF SEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQE PGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTS PEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNE RTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCP IDADGFCPMDKFDSVLNEAVK" mat_peptide 1064874..1066046 /gene="agp" /locus_tag="b1002" /gene_synonym="ECK0993; JW0987" /product="glucose-1-phosphatase/inositol phosphatase" /experiment="N-terminus verified by Edman degradation: PMID 2153660,9298646" gene complement(1066087..1066314) /gene="yccJ" /locus_tag="b1003" /gene_synonym="ECK0994; JW0988" /db_xref="ECOCYC:EG12703" /db_xref="EcoGene:EG12703" /db_xref="GeneID:948930" CDS complement(1066087..1066314) /gene="yccJ" /locus_tag="b1003" /gene_synonym="ECK0994; JW0988" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415523.1" /db_xref="GI:16128969" /db_xref="ASAP:ABE-0003390" /db_xref="UniProtKB/Swiss-Prot:P0AB14" /db_xref="ECOCYC:EG12703" /db_xref="EcoGene:EG12703" /db_xref="GeneID:948930" /translation="MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWE EGSDEVLVKAFAKTDKDSLFWGEQTIERKNV" mat_peptide complement(1066090..1066311) /gene="yccJ" /locus_tag="b1003" /gene_synonym="ECK0994; JW0988" /product="predicted protein" /experiment="N-terminus verified by Edman degradation: PMID 9868784" gene complement(1066335..1066931) /gene="wrbA" /locus_tag="b1004" /gene_synonym="ECK0995; JW0989" /db_xref="ECOCYC:EG11540" /db_xref="EcoGene:EG11540" /db_xref="GeneID:947263" CDS complement(1066335..1066931) /gene="wrbA" /locus_tag="b1004" /gene_synonym="ECK0995; JW0989" /function="enzyme; Not classified" /GO_component="GO:0005737 - cytoplasm" /note="flavoprotein WrbA (Trp repressor binding protein)" /codon_start=1 /transl_table=11 /product="NAD(P)H:quinone oxidoreductase" /protein_id="NP_415524.1" /db_xref="GI:16128970" /db_xref="ASAP:ABE-0003392" /db_xref="UniProtKB/Swiss-Prot:P0A8G6" /db_xref="ECOCYC:EG11540" /db_xref="EcoGene:EG11540" /db_xref="GeneID:947263" /translation="MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMP PQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGA LYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPY GATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG" mat_peptide complement(1066338..1066928) /gene="wrbA" /locus_tag="b1004" /gene_synonym="ECK0995; JW0989" /product="NAD(P)H:quinone oxidoreductase" /experiment="N-terminus verified by Edman degradation: PMID 8516330" gene 1067304..1067477 /gene="ymdF" /locus_tag="b4518" /gene_synonym="ECK0996; JW5136" /db_xref="ECOCYC:G0-10443" /db_xref="EcoGene:EG14358" /db_xref="GeneID:945598" CDS 1067304..1067477 /gene="ymdF" /locus_tag="b4518" /gene_synonym="ECK0996; JW5136" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415525.2" /db_xref="GI:94541090" /db_xref="ASAP:ABE-0285039" /db_xref="UniProtKB/Swiss-Prot:P56614" /db_xref="ECOCYC:G0-10443" /db_xref="EcoGene:EG14358" /db_xref="GeneID:945598" /translation="MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAG KKGGKSSHGKSDN" repeat_region 1067577..1067674 /note="RIP92 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1067734..1069062) /gene="rutG" /locus_tag="b1006" /gene_synonym="ECK0997; JW5137; ycdG" /db_xref="ECOCYC:G6517" /db_xref="EcoGene:EG13853" /db_xref="GeneID:946589" CDS complement(1067734..1069062) /gene="rutG" /locus_tag="b1006" /gene_synonym="ECK0997; JW5137; ycdG" /function="transport; Pyrimidine nitrogen catabolism" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="pyrimidine permease" /protein_id="NP_415526.4" /db_xref="GI:90111201" /db_xref="ASAP:ABE-0003401" /db_xref="UniProtKB/Swiss-Prot:P75892" /db_xref="ECOCYC:G6517" /db_xref="EcoGene:EG13853" /db_xref="GeneID:946589" /translation="MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMF GATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNG QGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAP IAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLG LGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGR NMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAML LGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTL VLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLVDVPPPEVVHQEP" gene complement(1069083..1069577) /gene="rutF" /locus_tag="b1007" /gene_synonym="ECK0998; JW5138; ycdH" /db_xref="ECOCYC:G6518" /db_xref="EcoGene:EG13854" /db_xref="GeneID:946594" CDS complement(1069083..1069577) /gene="rutF" /locus_tag="b1007" /gene_synonym="ECK0998; JW5138; ycdH" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="flavin:NADH reductase" /protein_id="NP_415527.4" /db_xref="GI:90111202" /db_xref="ASAP:ABE-0003403" /db_xref="UniProtKB/Swiss-Prot:P75893" /db_xref="ECOCYC:G6518" /db_xref="EcoGene:EG13854" /db_xref="GeneID:946594" /translation="MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTD TPPTLLVCLNRGASVWPAFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQT GVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHTTPYGLVWFDRSYHALM RPAC" gene complement(1069588..1070178) /gene="rutE" /locus_tag="b1008" /gene_synonym="ECK0999; JW0993; ycdI" /db_xref="ECOCYC:G6519" /db_xref="EcoGene:EG13855" /db_xref="GeneID:946591" CDS complement(1069588..1070178) /gene="rutE" /locus_tag="b1008" /gene_synonym="ECK0999; JW0993; ycdI" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="malonic semialdehyde reductase" /protein_id="NP_415528.1" /db_xref="GI:16128974" /db_xref="ASAP:ABE-0003407" /db_xref="UniProtKB/Swiss-Prot:P75894" /db_xref="ECOCYC:G6519" /db_xref="EcoGene:EG13855" /db_xref="GeneID:946591" /translation="MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGP TSANCSPARIVFTRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFP HGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFT GSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL" gene complement(1070188..1070988) /gene="rutD" /locus_tag="b1009" /gene_synonym="ECK1000; JW0994; ycdJ" /db_xref="ECOCYC:G6520" /db_xref="EcoGene:EG13856" /db_xref="GeneID:946586" CDS complement(1070188..1070988) /gene="rutD" /locus_tag="b1009" /gene_synonym="ECK1000; JW0994; ycdJ" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="putative aminoacrylate hydrolase" /protein_id="NP_415529.1" /db_xref="GI:16128975" /db_xref="ASAP:ABE-0003410" /db_xref="UniProtKB/Swiss-Prot:P75895" /db_xref="ECOCYC:G6520" /db_xref="EcoGene:EG13856" /db_xref="GeneID:946586" /translation="MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVC YDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYP ASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPR LEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSS ELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL" gene complement(1070996..1071382) /gene="rutC" /locus_tag="b1010" /gene_synonym="ECK1001; JW0995; ycdK" /db_xref="ECOCYC:G6521" /db_xref="EcoGene:EG13857" /db_xref="GeneID:945599" CDS complement(1070996..1071382) /gene="rutC" /locus_tag="b1010" /gene_synonym="ECK1001; JW0995; ycdK" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="putative aminoacrylate peracid reductase" /protein_id="NP_415530.1" /db_xref="GI:16128976" /db_xref="ASAP:ABE-0003412" /db_xref="UniProtKB/Swiss-Prot:P0AFQ5" /db_xref="ECOCYC:G6521" /db_xref="EcoGene:EG13857" /db_xref="GeneID:945599" /translation="MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLF ADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKP ARFCIQCGLVKPDALVEIATIAHIAK" gene complement(1071394..1072086) /gene="rutB" /locus_tag="b1011" /gene_synonym="ECK1002; JW5139; ycdL" /db_xref="ECOCYC:G6522" /db_xref="EcoGene:EG13858" /db_xref="GeneID:945699" CDS complement(1071394..1072086) /gene="rutB" /locus_tag="b1011" /gene_synonym="ECK1002; JW5139; ycdL" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="ureidoacrylate amidohydrolase" /protein_id="NP_415531.2" /db_xref="GI:90111203" /db_xref="ASAP:ABE-0003414" /db_xref="UniProtKB/Swiss-Prot:P75897" /db_xref="ECOCYC:G6522" /db_xref="EcoGene:EG13858" /db_xref="GeneID:945699" /translation="MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVS TTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQP QLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTG IATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFC DALSPTSFAHIA" gene complement(1072086..1073234) /gene="rutA" /locus_tag="b1012" /gene_synonym="ECK1003; JW0997; ycdM" /db_xref="ECOCYC:G6523" /db_xref="EcoGene:EG13859" /db_xref="GeneID:945643" CDS complement(1072086..1073234) /gene="rutA" /locus_tag="b1012" /gene_synonym="ECK1003; JW0997; ycdM" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="pyrimidine oxygenase, FMN-dependent" /protein_id="NP_415532.3" /db_xref="GI:49176071" /db_xref="ASAP:ABE-0003416" /db_xref="UniProtKB/Swiss-Prot:P75898" /db_xref="ECOCYC:G6523" /db_xref="EcoGene:EG13859" /db_xref="GeneID:945643" /translation="MQDAAPRLTFTLRDEERLMMKIGVFVPIGNNGWLISTHAPQYMP TFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQI YATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRY DYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAR YADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWE HYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARML DEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA" gene 1073465..1074103 /gene="rutR" /locus_tag="b1013" /gene_synonym="ECK1004; JW0998; ycdC" /db_xref="ECOCYC:EG12301" /db_xref="EcoGene:EG12301" /db_xref="GeneID:945075" CDS 1073465..1074103 /gene="rutR" /locus_tag="b1013" /gene_synonym="ECK1004; JW0998; ycdC" /function="regulator; Pyrimidine nitrogen catabolism" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="hypothetical transcriptional regulator" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor for rut operon" /protein_id="NP_415533.1" /db_xref="GI:16128979" /db_xref="ASAP:ABE-0003422" /db_xref="UniProtKB/Swiss-Prot:P0ACU2" /db_xref="ECOCYC:EG12301" /db_xref="EcoGene:EG12301" /db_xref="GeneID:945075" /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ HLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR" repeat_region 1074108..1074135 /note="REP93 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1074143..1078105) /gene="putA" /locus_tag="b1014" /gene_synonym="ECK1005; JW0999; poaA; putC" /db_xref="ECOCYC:EG10801" /db_xref="EcoGene:EG10801" /db_xref="GeneID:945600" CDS complement(1074143..1078105) /gene="putA" /locus_tag="b1014" /gene_synonym="ECK1005; JW0999; poaA; putC" /EC_number="1.5.99.8" /EC_number="1.5.1.12" /function="enzyme; Degradation of small molecules: Amino acids" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0009063 - cellular amino acid catabolic process; GO:0006350 - transcription" /note="proline dehydrogenase, P5C dehydrogenase" /codon_start=1 /transl_table=11 /product="fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase" /protein_id="NP_415534.1" /db_xref="GI:16128980" /db_xref="ASAP:ABE-0003424" /db_xref="UniProtKB/Swiss-Prot:P09546" /db_xref="ECOCYC:EG10801" /db_xref="EcoGene:EG10801" /db_xref="GeneID:945600" /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ EGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGK LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEESDRLEISLDLLEKLCFEPE LAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPR EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGS TEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYN RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAKYPVDAQLKAALTQPLNAL REWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS DQLRALCEAVAARDGTIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG" gene 1078528..1080036 /gene="putP" /locus_tag="b1015" /gene_synonym="ECK1006; JW1001; putC" /db_xref="ECOCYC:EG10802" /db_xref="EcoGene:EG10802" /db_xref="GeneID:945602" CDS 1078528..1080036 /gene="putP" /locus_tag="b1015" /gene_synonym="ECK1006; JW1001; putC" /function="transport; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 1567896" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0005298 - proline:sodium symporter activity" /GO_process="GO:0006561 - proline biosynthetic process" /note="major sodium/proline symporter" /codon_start=1 /transl_table=11 /product="proline:sodium symporter" /protein_id="NP_415535.1" /db_xref="GI:16128981" /db_xref="ASAP:ABE-0003433" /db_xref="UniProtKB/Swiss-Prot:P07117" /db_xref="ECOCYC:EG10802" /db_xref="EcoGene:EG10802" /db_xref="GeneID:945602" /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT WMILCLAGAVAVGFFGIAYFNDHPALAGAVNQNAERVFIELAQILFNPWIAGILLSAI LAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWL GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES" repeat_region 1080335..1080368 /note="REP94 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1080579..1081408 /gene="efeU" /locus_tag="b4490" /old_locus_tag="b1016" /old_locus_tag="b1017" /gene_synonym="ECK1007; JW1002; JW5141; ycdN" /pseudo /db_xref="EcoGene:EG13860" /db_xref="GeneID:948956" CDS join(1080579..1080683,1080683..1081408) /gene="efeU" /locus_tag="b4490" /old_locus_tag="b1016" /old_locus_tag="b1017" /gene_synonym="ECK1007; JW1002; JW5141; ycdN" /note="ferrous iron permease (pseudogene)" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003441" /db_xref="ASAP:ABE-0003443" /db_xref="ASAP:ABE-0285091" /db_xref="UniProtKB/Swiss-Prot:P75901" /db_xref="EcoGene:EG13860" /db_xref="GeneID:948956" gene 1081466..1082593 /gene="efeO" /locus_tag="b1018" /gene_synonym="ECK1008; JW1003; ycdO" /db_xref="ECOCYC:G6527" /db_xref="EcoGene:EG13861" /db_xref="GeneID:945603" CDS 1081466..1082593 /gene="efeO" /locus_tag="b1018" /gene_synonym="ECK1008; JW1003; ycdO" /codon_start=1 /transl_table=11 /product="inactive ferrous ion transporter EfeUOB" /protein_id="NP_415537.1" /db_xref="GI:16128982" /db_xref="ASAP:ABE-0003448" /db_xref="UniProtKB/Swiss-Prot:P0AB24" /db_xref="ECOCYC:G6527" /db_xref="EcoGene:EG13861" /db_xref="GeneID:945603" /translation="MTINFRRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY RTKDGFETYDKLTDADRNALKGPITALAEDLAQLRGVLGLD" gene 1082599..1083870 /gene="efeB" /locus_tag="b1019" /gene_synonym="ECK1009; JW1004; ycdB" /db_xref="ECOCYC:EG11735" /db_xref="EcoGene:EG11735" /db_xref="GeneID:946500" CDS 1082599..1083870 /gene="efeB" /locus_tag="b1019" /gene_synonym="ECK1009; JW1004; ycdB" /codon_start=1 /transl_table=11 /product="deferrrochelatase, periplasmic" /protein_id="NP_415538.1" /db_xref="GI:16128983" /db_xref="ASAP:ABE-0003451" /db_xref="UniProtKB/Swiss-Prot:P31545" /db_xref="ECOCYC:EG11735" /db_xref="EcoGene:EG11735" /db_xref="GeneID:946500" /translation="MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGT LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLT QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQ FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLAN PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE EYVKPIGGGYFFALPGVKDANDYFGSALLRV" repeat_region 1083905..1083990 /note="REP95 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 1084215..1085279 /gene="phoH" /locus_tag="b1020" /gene_synonym="ECK1010; JW1005; psiH" /db_xref="ECOCYC:EG11734" /db_xref="EcoGene:EG11734" /db_xref="GeneID:948010" CDS 1084215..1085279 /gene="phoH" /locus_tag="b1020" /gene_synonym="ECK1010; JW1005; psiH" /function="regulator; Central intermediary metabolism: Phosphorus compounds" /experiment="N-terminus verified by Edman degradation: PMID 8444794" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006793 - phosphorus metabolic process; GO:0042594 - response to starvation" /note="PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation" /codon_start=1 /transl_table=11 /product="conserved protein with nucleoside triphosphate hydrolase domain" /protein_id="NP_415539.1" /db_xref="GI:16128984" /db_xref="ASAP:ABE-0003458" /db_xref="UniProtKB/Swiss-Prot:P0A9K1" /db_xref="ECOCYC:EG11734" /db_xref="EcoGene:EG11734" /db_xref="GeneID:948010" /translation="MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDA VNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKA RREAKRVLRRDSRSHKQREEESVTSLVQMGGVEAIGMARDSRDTSPILARNEAQLHYL KAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGD IAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDE AQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVR FGKEDCVRSALCQRTLHAYS" gene complement(1085329..1085742) /gene="pgaD" /locus_tag="b1021" /gene_synonym="ECK1011; hmsS; JW1006; ycdP" /db_xref="ECOCYC:G6528" /db_xref="EcoGene:EG13862" /db_xref="GeneID:947503" CDS complement(1085329..1085742) /gene="pgaD" /locus_tag="b1021" /gene_synonym="ECK1011; hmsS; JW1006; ycdP" /GO_component="GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="required for biofilm adhesin polysaccharide PGA synthesis" /protein_id="NP_415540.1" /db_xref="GI:16128985" /db_xref="ASAP:ABE-0003460" /db_xref="UniProtKB/Swiss-Prot:P69432" /db_xref="ECOCYC:G6528" /db_xref="EcoGene:EG13862" /db_xref="GeneID:947503" /translation="MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGY YWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIP DELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA" gene complement(1085744..1087069) /gene="pgaC" /locus_tag="b1022" /gene_synonym="ECK1012; hmsR; JW1007; ycdQ" /db_xref="ECOCYC:G6529" /db_xref="EcoGene:EG13863" /db_xref="GeneID:945606" CDS complement(1085744..1087069) /gene="pgaC" /locus_tag="b1022" /gene_synonym="ECK1012; hmsR; JW1007; ycdQ" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted glycosyl transferase" /protein_id="NP_415541.1" /db_xref="GI:16128986" /db_xref="ASAP:ABE-0003464" /db_xref="UniProtKB/Swiss-Prot:P75905" /db_xref="ECOCYC:G6529" /db_xref="EcoGene:EG13863" /db_xref="GeneID:945606" /translation="MINRIVSFFILCLVLCIPLCVAYFHSGELMMRFVFFWPFFMSIM WIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEEKNVEETIHAALAQRY ENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLV CIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQVGEYSSIIGLIK RTQRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQWTIFYEPRA LCWILMPETLKGLWKQRLRWAQGGAEVFLKNMTRLWRKENFRMWPLFFEYCLTTIWAF TCLVGFIIYAVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLMIENRYEHNLT SSLFWIIWFPVIFWMLSLATTLVSFTRVMLMPKKQRARWVSPDRGILRG" gene complement(1087062..1089080) /gene="pgaB" /locus_tag="b1023" /gene_synonym="ECK1013; JW5142; ycdR" /db_xref="ECOCYC:G6530" /db_xref="EcoGene:EG13864" /db_xref="GeneID:945604" CDS complement(1087062..1089080) /gene="pgaB" /locus_tag="b1023" /gene_synonym="ECK1013; JW5142; ycdR" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="biofilm adhesin polysaccharide PGA export lipoprotein with a polysaccharide deacetylase activity needed for export" /protein_id="NP_415542.1" /db_xref="GI:16128987" /db_xref="ASAP:ABE-0003467" /db_xref="UniProtKB/Swiss-Prot:P75906" /db_xref="ECOCYC:G6530" /db_xref="EcoGene:EG13864" /db_xref="GeneID:945604" /translation="MLRNGNKYLLMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPW PHNGFVAISWHNVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGK PLPEKAVVLTFDDGYQSFYTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVD REYFATWQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYET AAEYRERIRLDAVKMTEYLRTKVEVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLES GLANASQLDSIPRVLIANNPSLKEFAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDR NIDVLIQRVKDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRVAWQLRTR SGVNIYAWMPVLSWDLDPTLTRVKYLPTGEKKAQIHPEQYHRLSPFDDRVRAQVGMLY EDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLSEIRQNPEQFKQWAR FKSRALTDFTLELSARVKAIRGPHIKTARNIFALPVIQPESEAWFAQNYADFLKSYDW TAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQAKDKSILELQAQNWQKNGQHQAISS QQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDLIRPEFSTAWYPKND" gene complement(1089089..1091512) /gene="pgaA" /locus_tag="b1024" /gene_synonym="ECK1014; JW1010; ycdS" /db_xref="ECOCYC:G6531" /db_xref="EcoGene:EG13865" /db_xref="GeneID:945596" CDS complement(1089089..1091512) /gene="pgaA" /locus_tag="b1024" /gene_synonym="ECK1014; JW1010; ycdS" /function="putative membrane; Not classified" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative outer membrane protein" /codon_start=1 /transl_table=11 /product="biofilm adhesin polysaccharide PGA export, predicted OM protein" /protein_id="NP_415543.1" /db_xref="GI:16128988" /db_xref="ASAP:ABE-0003469" /db_xref="UniProtKB/Swiss-Prot:P69434" /db_xref="ECOCYC:G6531" /db_xref="EcoGene:EG13865" /db_xref="GeneID:945596" /translation="MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIE ARKGNTQPALSWFALKSALSNNQIADWLQIALWAGQDKQVITVYNRYRHQQLPARGYA AVAVAYRNLQQWQNSLTLWQKALSLEPQNKDYQRGQILTLADAGHYDTALVKLKQLNS GAPDKANLLAEAYIYKLAGRHQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAI DDANLTPDIRADIHAELVRLSFMPTRSESERYAIADRALAQYAALEILWHDNPDRTAQ YQRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWGQYWVASAYLKDHQPKKAQS IMTELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTP TSIPNDTWLQGHSFLSTVAKYSNDLPQAEMTARELAYNAPGNQGLRIDYASVLQARGW PRAAENELKKAEVIEPRNINLEVEQAWTALTLQEWQQAAVLTHDVVEREPQDPGVVRL KRAVDVHNLAELRIAGSTGIDAEGPDSGKHDVDLTTIVYSPPLKDNWRGFAGFGYADG QFSEGKGIVRDWLAGVEWRSRNIWLEAEYAERVFNHEHKPGARLSGWYDFNDNWRIGS QLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRKYGVSWAFTDFSDSNQRHEVSLE GQERIWSSPYLIVDFLPSLYYEQNTEHDTPYYNPIKTFDIVPAFEASHLLWRSYENSW EQIFSAGVGASWQKHYGTDVVTQLGYGQRISWNDVIDAGATLRWEKRPYDGDREHNLY VEFDMTFRF" gene 1092099..1093457 /gene="ycdT" /locus_tag="b1025" /gene_synonym="ECK1015; JW5143" /db_xref="ECOCYC:G6532" /db_xref="EcoGene:EG13866" /db_xref="GeneID:945593" CDS 1092099..1093457 /gene="ycdT" /locus_tag="b1025" /gene_synonym="ECK1015; JW5143" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="NP_415544.1" /db_xref="GI:16128989" /db_xref="ASAP:ABE-0003472" /db_xref="UniProtKB/Swiss-Prot:P75908" /db_xref="ECOCYC:G6532" /db_xref="EcoGene:EG13866" /db_xref="GeneID:945593" /translation="MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYL MVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEER LTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFG GPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRY DIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD NPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCE SP" repeat_region complement(1093468..1094725) /mobile_element="insertion sequence:IS3D" gene complement(1093498..1094364) /gene="insF" /locus_tag="b1026" /gene_synonym="ECK0299" /db_xref="ECOCYC:G6533" /db_xref="EcoGene:EG40006" /db_xref="GeneID:945587" CDS complement(1093498..1094364) /gene="insF" /locus_tag="b1026" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="NP_415545.1" /db_xref="GI:16128990" /db_xref="ASAP:ABE-0003475" /db_xref="ECOCYC:G6533" /db_xref="EcoGene:EG40006" /db_xref="GeneID:945587" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(1094361..1094660) /gene="insE" /locus_tag="b1027" /gene_synonym="ECK0298" /db_xref="ECOCYC:G6534" /db_xref="EcoGene:EG40005" /db_xref="GeneID:945584" CDS complement(1094361..1094660) /gene="insE" /locus_tag="b1027" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="NP_415546.2" /db_xref="GI:226524706" /db_xref="ASAP:ABE-0003477" /db_xref="ECOCYC:G6534" /db_xref="EcoGene:EG40005" /db_xref="GeneID:945584" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 1094728..1095069 /gene="ymdE" /locus_tag="b1028" /gene_synonym="ECK1016; JW5145" /pseudo /db_xref="EcoGene:EG14357" /db_xref="GeneID:945589" CDS 1094728..1095069 /gene="ymdE" /locus_tag="b1028" /gene_synonym="ECK1016; JW5145" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003486" /db_xref="UniProtKB/Swiss-Prot:P75909" /db_xref="EcoGene:EG14357" /db_xref="GeneID:945589" gene 1095066..1096052 /gene="ycdU" /locus_tag="b1029" /gene_synonym="ECK1017; JW1015" /db_xref="ECOCYC:G6536" /db_xref="EcoGene:EG13867" /db_xref="GeneID:945592" CDS 1095066..1096052 /gene="ycdU" /locus_tag="b1029" /gene_synonym="ECK1017; JW1015" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein" /protein_id="NP_415548.1" /db_xref="GI:16128993" /db_xref="ASAP:ABE-0003489" /db_xref="UniProtKB/Swiss-Prot:P75910" /db_xref="ECOCYC:G6536" /db_xref="EcoGene:EG13867" /db_xref="GeneID:945592" /translation="MIPDYLTFIRFQDKRNLIYIYAIGLILIGFYWKNAGFTFPSEDI GVVSGILALVLYNFIFDLKAYWAYKCVTKNIDFSWFKKKQNHKIELFLTQPLVAGFLS LIMLSAMSWGLYQLLPSLYALFLISLLGPLVIFLLFRMIRTSYVKQVAISVAKKVKYK SLTRYVLLSVCISTVVNLLTISPLRNSDSFVTEGQWLTFKSIIALLILCGVVLAINLF FLRFSKRYAFLGRLFLQEIDLFFSSENALSTFFAKPLWLRLFILLVIEVMWITLVSVL ATLVEWRIWFEAYFLLCYVPCLIYYFFYCRFLWHNDFMMACDMYFRWGHFNK" gene complement(1096788..1096875) /gene="serX" /locus_tag="b1032" /gene_synonym="ECK1018; JWR0027" /db_xref="ECOCYC:EG30097" /db_xref="EcoGene:EG30097" /db_xref="GeneID:945714" tRNA complement(1096788..1096875) /gene="serX" /locus_tag="b1032" /gene_synonym="ECK1018; JWR0027" /product="tRNA-Ser" /note="anticodon: GGA" /db_xref="ASAP:ABE-0003498" /db_xref="ECOCYC:EG30097" /db_xref="EcoGene:EG30097" /db_xref="GeneID:945714" gene 1097109..1098047 /gene="ghrA" /locus_tag="b1033" /gene_synonym="ECK1019; JW5146; ycdW" /db_xref="ECOCYC:G6539" /db_xref="EcoGene:EG13869" /db_xref="GeneID:946431" CDS 1097109..1098047 /gene="ghrA" /locus_tag="b1033" /gene_synonym="ECK1019; JW5146; ycdW" /EC_number="1.1.1.79" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 11237876" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="glyoxylate/hydroxypyruvate reductase A" /protein_id="NP_415551.2" /db_xref="GI:90111205" /db_xref="ASAP:ABE-0003503" /db_xref="UniProtKB/Swiss-Prot:P75913" /db_xref="ECOCYC:G6539" /db_xref="EcoGene:EG13869" /db_xref="GeneID:946431" /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRF PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY" gene 1098102..1098839 /gene="ycdX" /locus_tag="b1034" /gene_synonym="ECK1020; JW1017" /db_xref="ECOCYC:G6540" /db_xref="EcoGene:EG13870" /db_xref="GeneID:948477" CDS 1098102..1098839 /gene="ycdX" /locus_tag="b1034" /gene_synonym="ECK1020; JW1017" /GO_process="GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="predicted zinc-binding hydrolase" /protein_id="NP_415552.1" /db_xref="GI:16128997" /db_xref="ASAP:ABE-0003508" /db_xref="UniProtKB/Swiss-Prot:P75914" /db_xref="ECOCYC:G6540" /db_xref="EcoGene:EG13870" /db_xref="GeneID:948477" /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS SFLHSRKGSEDNCREVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER ILNVSPRRLLNFLESRGMAPIAEFADL" gene 1098863..1099417 /gene="ycdY" /locus_tag="b1035" /gene_synonym="ECK1021; JW1018" /db_xref="ECOCYC:G6541" /db_xref="EcoGene:EG13871" /db_xref="GeneID:945609" CDS 1098863..1099417 /gene="ycdY" /locus_tag="b1035" /gene_synonym="ECK1021; JW1018" /function="putative enzyme; Not classified" /note="putative oxidoreductase component" /codon_start=1 /transl_table=11 /product="conserved protein, REMP family" /protein_id="NP_415553.1" /db_xref="GI:16128998" /db_xref="ASAP:ABE-0003511" /db_xref="UniProtKB/Swiss-Prot:P75915" /db_xref="ECOCYC:G6541" /db_xref="EcoGene:EG13871" /db_xref="GeneID:945609" /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ DELLTRLQKSCDMTQVSADYNALFIGDECAVPPYRSAWVEGATEAEVRAFLSERGMPL ADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW RTMAPLTRDAISAMWDELEEDSEE" gene 1099519..1100010 /gene="ycdZ" /locus_tag="b1036" /gene_synonym="ECK1022; JW5147" /db_xref="ECOCYC:G6542" /db_xref="EcoGene:EG13872" /db_xref="GeneID:945617" CDS 1099519..1100010 /gene="ycdZ" /locus_tag="b1036" /gene_synonym="ECK1022; JW5147" /codon_start=1 /transl_table=11 /product="inner membrane protein, DUF1097 family" /protein_id="NP_415554.4" /db_xref="GI:90111206" /db_xref="ASAP:ABE-0003514" /db_xref="UniProtKB/Swiss-Prot:P75916" /db_xref="ECOCYC:G6542" /db_xref="EcoGene:EG13872" /db_xref="GeneID:945617" /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS FVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIK NKA" repeat_region 1100044..1100062 /note="REP96 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1100074..1100907) /gene="csgG" /locus_tag="b1037" /gene_synonym="agfG; ECK1023; JW1020" /db_xref="ECOCYC:G6543" /db_xref="EcoGene:EG13413" /db_xref="GeneID:945619" CDS complement(1100074..1100907) /gene="csgG" /locus_tag="b1037" /gene_synonym="agfG; ECK1023; JW1020" /function="structural component; Surface structures" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall; GO:0009289 - pilus" /note="curli production assembly/transport component, 2nd curli operon" /codon_start=1 /transl_table=11 /product="Curli production assembly/transport outer membrane lipoprotein" /protein_id="NP_415555.1" /db_xref="GI:16129000" /db_xref="ASAP:ABE-0003516" /db_xref="UniProtKB/Swiss-Prot:P0AEA2" /db_xref="ECOCYC:G6543" /db_xref="EcoGene:EG13413" /db_xref="GeneID:945619" /translation="MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPA PTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQ NLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGE VGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPE S" gene complement(1100934..1101350) /gene="csgF" /locus_tag="b1038" /gene_synonym="agfF; ECK1024; JW1021" /db_xref="ECOCYC:G6544" /db_xref="EcoGene:EG13412" /db_xref="GeneID:945622" CDS complement(1100934..1101350) /gene="csgF" /locus_tag="b1038" /gene_synonym="agfF; ECK1024; JW1021" /function="structural component; Surface structures" /GO_component="GO:0009289 - pilus" /note="curli production assembly/transport component, 2nd curli operon" /codon_start=1 /transl_table=11 /product="outer membrane protein involved in curlin assembly/transport" /protein_id="NP_415556.1" /db_xref="GI:16129001" /db_xref="ASAP:ABE-0003519" /db_xref="UniProtKB/Swiss-Prot:P0AE98" /db_xref="ECOCYC:G6544" /db_xref="EcoGene:EG13412" /db_xref="GeneID:945622" /translation="MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNS AQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIV DIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF" gene complement(1101375..1101764) /gene="csgE" /locus_tag="b1039" /gene_synonym="agfE; ECK1025; JW1022" /db_xref="ECOCYC:G6545" /db_xref="EcoGene:EG13411" /db_xref="GeneID:945711" CDS complement(1101375..1101764) /gene="csgE" /locus_tag="b1039" /gene_synonym="agfE; ECK1025; JW1022" /function="structural component; Surface structures" /GO_component="GO:0009289 - pilus" /note="curli production assembly/transport component, 2nd curli operon" /codon_start=1 /transl_table=11 /product="curli production assembly/transport componen" /protein_id="NP_415557.1" /db_xref="GI:16129002" /db_xref="ASAP:ABE-0003528" /db_xref="UniProtKB/Swiss-Prot:P0AE95" /db_xref="ECOCYC:G6545" /db_xref="EcoGene:EG13411" /db_xref="GeneID:945711" /translation="MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFY RAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFAL IQTEEALNRRQINQALLSTGDLAHDEF" gene complement(1101769..1102419) /gene="csgD" /locus_tag="b1040" /gene_synonym="agfD; ECK1026; JW1023" /db_xref="ECOCYC:G6546" /db_xref="EcoGene:EG13410" /db_xref="GeneID:949119" CDS complement(1101769..1102419) /gene="csgD" /locus_tag="b1040" /gene_synonym="agfD; ECK1026; JW1023" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="putative 2-component transcriptional regulator for 2nd curli operon" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional activator for csgBA" /protein_id="NP_415558.1" /db_xref="GI:16129003" /db_xref="ASAP:ABE-0003530" /db_xref="UniProtKB/Swiss-Prot:P52106" /db_xref="ECOCYC:G6546" /db_xref="EcoGene:EG13410" /db_xref="GeneID:949119" /translation="MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQ RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWP HINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR" gene 1103174..1103629 /gene="csgB" /locus_tag="b1041" /gene_synonym="agfB; ECK1027; JW1024" /db_xref="ECOCYC:G6547" /db_xref="EcoGene:EG12621" /db_xref="GeneID:947391" CDS 1103174..1103629 /gene="csgB" /locus_tag="b1041" /gene_synonym="agfB; ECK1027; JW1024" /function="structural component; Surface structures" /GO_component="GO:0009279 - cell outer membrane; GO:0009289 - pilus" /GO_process="GO:0009101 - glycoprotein biosynthetic process" /note="minor curlin subunit precursor, similar ro CsgA" /codon_start=1 /transl_table=11 /product="curlin nucleator protein, minor subunit in curli complex" /protein_id="NP_415559.1" /db_xref="GI:16129004" /db_xref="ASAP:ABE-0003534" /db_xref="UniProtKB/Swiss-Prot:P0ABK7" /db_xref="ECOCYC:G6547" /db_xref="EcoGene:EG12621" /db_xref="GeneID:947391" /translation="MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFN QAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDA SISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR" gene 1103670..1104125 /gene="csgA" /locus_tag="b1042" /gene_synonym="agfA; ECK1028; JW1025" /db_xref="ECOCYC:EG11489" /db_xref="EcoGene:EG11489" /db_xref="GeneID:949055" CDS 1103670..1104125 /gene="csgA" /locus_tag="b1042" /gene_synonym="agfA; ECK1028; JW1025" /function="regulator; Surface structures" /GO_component="GO:0009279 - cell outer membrane; GO:0009289 - pilus" /GO_process="GO:0009101 - glycoprotein biosynthetic process" /note="curlin major subunit, coiled surface structures; cryptic" /codon_start=1 /transl_table=11 /product="cryptic curlin major subunit" /protein_id="NP_415560.1" /db_xref="GI:16129005" /db_xref="ASAP:ABE-0003537" /db_xref="UniProtKB/Swiss-Prot:P28307" /db_xref="ECOCYC:EG11489" /db_xref="EcoGene:EG11489" /db_xref="GeneID:949055" /translation="MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSE LNIYQYGGGNSALALQTDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSAT LDQWNGKNSEMTVKQFGGGNGAAVDQTASNSSVNVTQVGFGNNATAHQY" mat_peptide 1103730..1104122 /gene="csgA" /locus_tag="b1042" /gene_synonym="agfA; ECK1028; JW1025" /product="cryptic curlin major subunit" /experiment="N-terminus verified by Edman degradation: PMID 1357528,1677357" gene 1104184..1104516 /gene="csgC" /locus_tag="b1043" /gene_synonym="agfC; ECK1029; JW1026; ycdE" /db_xref="ECOCYC:G6548" /db_xref="EcoGene:EG13414" /db_xref="GeneID:945623" CDS 1104184..1104516 /gene="csgC" /locus_tag="b1043" /gene_synonym="agfC; ECK1029; JW1026; ycdE" /function="putative structure; Not classified" /GO_component="GO:0009289 - pilus" /note="putative curli production protein" /codon_start=1 /transl_table=11 /product="curli assembly protein" /protein_id="NP_415561.1" /db_xref="GI:16129006" /db_xref="ASAP:ABE-0003542" /db_xref="UniProtKB/Swiss-Prot:P52107" /db_xref="ECOCYC:G6548" /db_xref="EcoGene:EG13414" /db_xref="GeneID:945623" /translation="MNTLLLLAALSSQITFNTTQQGDVYTIIPEVTLTQSCLCRVQIL SLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQ WPPSSEKS" gene 1104637..1104948 /gene="ymdA" /locus_tag="b1044" /gene_synonym="ECK1030; JW1031" /db_xref="ECOCYC:G6549" /db_xref="EcoGene:EG13873" /db_xref="GeneID:949012" CDS 1104637..1104948 /gene="ymdA" /locus_tag="b1044" /gene_synonym="ECK1030; JW1031" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415562.1" /db_xref="GI:16129007" /db_xref="ASAP:ABE-0003545" /db_xref="UniProtKB/Swiss-Prot:P75917" /db_xref="ECOCYC:G6549" /db_xref="EcoGene:EG13873" /db_xref="GeneID:949012" /translation="MFRPFLNSLMLGSLFFPFIAIAGSTVQGGVIHFYGQIVEPACDV STQSSPVEMNCPQNGSIPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEY N" gene 1105043..1105576 /gene="ymdB" /locus_tag="b1045" /gene_synonym="ECK1031; JW1032" /db_xref="ECOCYC:G6550" /db_xref="EcoGene:EG13874" /db_xref="GeneID:946987" CDS 1105043..1105576 /gene="ymdB" /locus_tag="b1045" /gene_synonym="ECK1031; JW1032" /note="putative polyprotein" /codon_start=1 /transl_table=11 /product="RNase III inhibitor during cold shock, UPF0189 family" /protein_id="NP_415563.1" /db_xref="GI:16129008" /db_xref="ASAP:ABE-0003549" /db_xref="UniProtKB/Swiss-Prot:P0A8D6" /db_xref="ECOCYC:G6550" /db_xref="EcoGene:EG13874" /db_xref="GeneID:946987" /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD EENAHLYERLLTQQGDE" gene 1105578..1106999 /gene="ymdC" /locus_tag="b1046" /gene_synonym="ECK1032; JW5150" /db_xref="ECOCYC:G6551" /db_xref="EcoGene:EG13875" /db_xref="GeneID:947321" CDS 1105578..1106999 /gene="ymdC" /locus_tag="b1046" /gene_synonym="ECK1032; JW5150" /function="putative enzyme; Not classified" /note="putative synthase" /codon_start=1 /transl_table=11 /product="predicted hydrolase" /protein_id="NP_415564.2" /db_xref="GI:90111207" /db_xref="ASAP:ABE-0003551" /db_xref="UniProtKB/Swiss-Prot:P75919" /db_xref="ECOCYC:G6551" /db_xref="EcoGene:EG13875" /db_xref="GeneID:947321" /translation="MPRLASAVLPLCSQHPGQCGLFPLEKSLDAFAARYRLAEMAEHT LDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDNNTPGLDDILRLLDSHPRIEV RLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVVTLVGGRNIGDAYFGAGEEPL FSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDVPEGEMADRIELPASWHNDAM THRYLRKMESSPFINHLVDGTLPLIWAKTRLLSDDPAKGEGKAKRHSLLPQRLFDIMG SPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTNSLAANDVAVVHAGYARWRKK LLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKTFSIDGKTVFIGSFNFDPRST LLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDRWGRINWVDRHAKKEIILKKE PATSFWKRVMVRLASILPVEWLL" gene complement(1107007..1108164) /gene="opgC" /locus_tag="b1047" /gene_synonym="ECK1033; JW1034; mdoC; ymdD" /db_xref="ECOCYC:G6552" /db_xref="EcoGene:EG13876" /db_xref="GeneID:946944" CDS complement(1107007..1108164) /gene="opgC" /locus_tag="b1047" /gene_synonym="ECK1033; JW1034; mdoC; ymdD" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009250 - glucan biosynthetic process; GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="membrane protein required for succinylation of osmoregulated periplasmic glucans (OPGs)" /protein_id="NP_415565.1" /db_xref="GI:16129010" /db_xref="ASAP:ABE-0003553" /db_xref="UniProtKB/Swiss-Prot:P75920" /db_xref="ECOCYC:G6552" /db_xref="EcoGene:EG13876" /db_xref="GeneID:946944" /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAES SLWLTLFNDFIHSFRMQVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR" gene 1108558..1110093 /gene="opgG" /locus_tag="b1048" /gene_synonym="ECK1034; JW1035; mdoA; mdoG" /db_xref="ECOCYC:EG11885" /db_xref="EcoGene:EG11885" /db_xref="GeneID:945005" CDS 1108558..1110093 /gene="opgG" /locus_tag="b1048" /gene_synonym="ECK1034; JW1035; mdoA; mdoG" /function="enzyme; Osmoregulated periplasmic glucan (OPG) biosynthesis" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009250 - glucan biosynthetic process; GO:0006970 - response to osmotic stress" /note="periplasmic glucans biosynthesis protein" /codon_start=1 /transl_table=11 /product="osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein" /protein_id="NP_415566.1" /db_xref="GI:16129011" /db_xref="ASAP:ABE-0003558" /db_xref="UniProtKB/Swiss-Prot:P33136" /db_xref="ECOCYC:EG11885" /db_xref="EcoGene:EG11885" /db_xref="GeneID:945005" /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYETPK SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY KFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNG LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP ANE" mat_peptide 1108624..1110090 /gene="opgG" /locus_tag="b1048" /gene_synonym="ECK1034; JW1035; mdoA; mdoG" /product="osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene 1110086..1112629 /gene="opgH" /locus_tag="b1049" /gene_synonym="ECK1035; JW1037; mdoA; mdoH" /db_xref="ECOCYC:EG11886" /db_xref="EcoGene:EG11886" /db_xref="GeneID:945624" CDS 1110086..1112629 /gene="opgH" /locus_tag="b1049" /gene_synonym="ECK1035; JW1037; mdoA; mdoH" /function="enzyme; Osmoregulated periplasmic glucan (OPG) biosynthesis biosynthesis" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006970 - response to osmotic stress" /note="membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO)" /codon_start=1 /transl_table=11 /product="membrane glycosyltransferase" /protein_id="NP_415567.1" /db_xref="GI:16129012" /db_xref="ASAP:ABE-0003560" /db_xref="UniProtKB/Swiss-Prot:P62517" /db_xref="ECOCYC:EG11886" /db_xref="EcoGene:EG11886" /db_xref="GeneID:945624" /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF WLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQ RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ" repeat_region 1112640..1112737 /note="RIP97 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 1112802..1113029 /gene="yceK" /locus_tag="b1050" /gene_synonym="ECK1036; JW5151" /db_xref="ECOCYC:EG12689" /db_xref="EcoGene:EG12689" /db_xref="GeneID:945613" CDS 1112802..1113029 /gene="yceK" /locus_tag="b1050" /gene_synonym="ECK1036; JW5151" /codon_start=1 /transl_table=11 /product="lipoprotein, DUF1375 family" /protein_id="NP_415568.1" /db_xref="GI:16129013" /db_xref="ASAP:ABE-0003565" /db_xref="UniProtKB/Swiss-Prot:P0AB31" /db_xref="ECOCYC:EG12689" /db_xref="EcoGene:EG12689" /db_xref="GeneID:945613" /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE" gene complement(1113030..1113404) /gene="msyB" /locus_tag="b1051" /gene_synonym="ECK1037; JW1039" /db_xref="ECOCYC:EG11338" /db_xref="EcoGene:EG11338" /db_xref="GeneID:945612" CDS complement(1113030..1113404) /gene="msyB" /locus_tag="b1051" /gene_synonym="ECK1037; JW1039" /function="phenotype; Protein, peptide secretion" /note="acidic protein suppresses mutants lacking function of protein export" /codon_start=1 /transl_table=11 /product="multicopy suppressor of secY and secA" /protein_id="NP_415569.4" /db_xref="GI:90111208" /db_xref="ASAP:ABE-0003567" /db_xref="UniProtKB/Swiss-Prot:P25738" /db_xref="ECOCYC:EG11338" /db_xref="EcoGene:EG11338" /db_xref="GeneID:945612" /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD GDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE FQLEPPLDTEEGRAAADEWDER" gene complement(1113487..1114713) /gene="mdtG" /locus_tag="b1053" /gene_synonym="ECK1038; JW1040; yceE" /db_xref="ECOCYC:EG11343" /db_xref="EcoGene:EG11343" /db_xref="GeneID:945627" CDS complement(1113487..1114713) /gene="mdtG" /locus_tag="b1053" /gene_synonym="ECK1038; JW1040; yceE" /function="putative transport; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="predicted drug efflux system" /protein_id="NP_415571.1" /db_xref="GI:16129016" /db_xref="ASAP:ABE-0003572" /db_xref="UniProtKB/Swiss-Prot:P25744" /db_xref="ECOCYC:EG11343" /db_xref="EcoGene:EG11343" /db_xref="GeneID:945627" /translation="MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQL GVTGHSALNMWSGIVFSITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMG LAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPM AGGLLADSYGLRPVFFITASVLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNP KLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAP RLGKLGDRIGPEKILITALIFSVLLLIPMSYVQTPLQLGILRFLLGAADGALLPAVQT LLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAV YSWNSLRRRRIPQVSN" repeat_region 1114849..1114875 /note="REP98 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1114885..1115805) /gene="lpxL" /locus_tag="b1054" /gene_synonym="ECK1039; htrB; JW1041; waaM" /db_xref="ECOCYC:EG10464" /db_xref="EcoGene:EG10464" /db_xref="GeneID:946216" CDS complement(1114885..1115805) /gene="lpxL" /locus_tag="b1054" /gene_synonym="ECK1039; htrB; JW1041; waaM" /EC_number="2.3.1.-" /function="factor; Adaptations, atypical conditions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009245 - lipid A biosynthetic process" /note="heat shock protein" /codon_start=1 /transl_table=11 /product="lauryl-acyl carrier protein (ACP)-dependent acyltransferase" /protein_id="NP_415572.1" /db_xref="GI:16129017" /db_xref="ASAP:ABE-0003574" /db_xref="UniProtKB/Swiss-Prot:P0ACV0" /db_xref="ECOCYC:EG10464" /db_xref="EcoGene:EG10464" /db_xref="GeneID:946216" /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY" gene 1116030..1117082 /gene="yceA" /locus_tag="b1055" /gene_synonym="ECK1040; JW1042" /db_xref="ECOCYC:EG11116" /db_xref="EcoGene:EG11116" /db_xref="GeneID:945601" CDS 1116030..1117082 /gene="yceA" /locus_tag="b1055" /gene_synonym="ECK1040; JW1042" /GO_process="GO:0007049 - cell cycle" /codon_start=1 /transl_table=11 /product="predicted rhodanese-related sulfurtransferase" /protein_id="NP_415573.1" /db_xref="GI:16129018" /db_xref="ASAP:ABE-0003581" /db_xref="UniProtKB/Swiss-Prot:P24188" /db_xref="ECOCYC:EG11116" /db_xref="EcoGene:EG11116" /db_xref="GeneID:945601" /translation="MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDA LYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDD GKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGF NKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDS HTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNK SRGRLNTTLCIPDPTE" repeat_region 1117091..1117111 /note="REP99 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1117124..1117699) /gene="yceI" /locus_tag="b1056" /gene_synonym="ECK1041; JW1043" /db_xref="ECOCYC:EG11820" /db_xref="EcoGene:EG11820" /db_xref="GeneID:946145" CDS complement(1117124..1117699) /gene="yceI" /locus_tag="b1056" /gene_synonym="ECK1041; JW1043" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="NP_415574.1" /db_xref="GI:16129019" /db_xref="ASAP:ABE-0003583" /db_xref="UniProtKB/Swiss-Prot:P0A8X2" /db_xref="ECOCYC:EG11820" /db_xref="EcoGene:EG11820" /db_xref="GeneID:946145" /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK IKLKDFNIKTDLGPASQEVDLIISVEGVQQK" mat_peptide complement(1117127..1117633) /gene="yceI" /locus_tag="b1056" /gene_synonym="ECK1041; JW1043" /product="secreted protein" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene complement(1117703..1118269) /gene="yceJ" /locus_tag="b1057" /gene_synonym="ECK1042; JW1044" /db_xref="ECOCYC:G6554" /db_xref="EcoGene:EG12659" /db_xref="GeneID:945628" CDS complement(1117703..1118269) /gene="yceJ" /locus_tag="b1057" /gene_synonym="ECK1042; JW1044" /function="putative enzyme; Not classified" /GO_process="GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="predicted cytochrome b561" /protein_id="NP_415575.1" /db_xref="GI:16129020" /db_xref="ASAP:ABE-0003585" /db_xref="UniProtKB/Swiss-Prot:P75925" /db_xref="ECOCYC:G6554" /db_xref="EcoGene:EG12659" /db_xref="GeneID:945628" /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGW YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLF AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG FMALKHHFIDKDDTLKRMLGKSSSDYGV" gene complement(1118530..1118670) /gene="yceO" /locus_tag="b1058" /gene_synonym="ECK1043; JW1045" /db_xref="ECOCYC:G6555" /db_xref="EcoGene:EG14334" /db_xref="GeneID:945629" CDS complement(1118530..1118670) /gene="yceO" /locus_tag="b1058" /gene_synonym="ECK1043; JW1045" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415576.1" /db_xref="GI:16129021" /db_xref="ASAP:ABE-0003588" /db_xref="UniProtKB/Swiss-Prot:P64442" /db_xref="ECOCYC:G6555" /db_xref="EcoGene:EG14334" /db_xref="GeneID:945629" /translation="MRPFLQEYLMRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVF YF" gene complement(1118691..1119809) /gene="solA" /locus_tag="b1059" /gene_synonym="ECK1044; JW1046" /db_xref="ECOCYC:G6556" /db_xref="EcoGene:EG12669" /db_xref="GeneID:944983" CDS complement(1118691..1119809) /gene="solA" /locus_tag="b1059" /gene_synonym="ECK1044; JW1046" /EC_number="1.5.3.2" /function="putative enzyme; Not classified" /note="sarcosine oxidase-like protein" /codon_start=1 /transl_table=11 /product="N-methyltryptophan oxidase, FAD-binding" /protein_id="NP_415577.1" /db_xref="GI:16129022" /db_xref="ASAP:ABE-0003590" /db_xref="UniProtKB/Swiss-Prot:P40874" /db_xref="ECOCYC:G6556" /db_xref="EcoGene:EG12669" /db_xref="GeneID:944983" /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEEDPIFVRSGVINLGPADSTFLAN VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK EAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRK VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV PFAEVASDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ" gene complement(1119924..1120178) /gene="bssS" /locus_tag="b1060" /gene_synonym="ECK1045; JW5152; yceP" /db_xref="ECOCYC:G6557" /db_xref="EcoGene:EG14335" /db_xref="GeneID:946104" CDS complement(1119924..1120178) /gene="bssS" /locus_tag="b1060" /gene_synonym="ECK1045; JW5152; yceP" /codon_start=1 /transl_table=11 /product="biofilm regulator" /protein_id="NP_415578.3" /db_xref="GI:49176074" /db_xref="ASAP:ABE-0003594" /db_xref="UniProtKB/Swiss-Prot:P0AB33" /db_xref="ECOCYC:G6557" /db_xref="EcoGene:EG14335" /db_xref="GeneID:946104" /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT EVGQTLWLTTDVARQFISILEAGIAKIESGDFQVNEYRRH" gene complement(1120465..1120710) /gene="dinI" /locus_tag="b1061" /gene_synonym="ECK1046; JW1048" /db_xref="ECOCYC:G6558" /db_xref="EcoGene:EG12670" /db_xref="GeneID:945022" CDS complement(1120465..1120710) /gene="dinI" /locus_tag="b1061" /gene_synonym="ECK1046; JW1048" /function="phenotype; Not classified" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006281 - DNA repair; GO:0009432 - SOS response" /note="damage-inducible protein I" /codon_start=1 /transl_table=11 /product="DNA damage-inducible protein I" /protein_id="NP_415579.1" /db_xref="GI:16129024" /db_xref="ASAP:ABE-0003599" /db_xref="UniProtKB/Swiss-Prot:P0ABR1" /db_xref="ECOCYC:G6558" /db_xref="EcoGene:EG12670" /db_xref="GeneID:945022" /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY AAANNLSVIGATKEDKQRISEILQETWESADDWFVSE" gene complement(1120784..1121830) /gene="pyrC" /locus_tag="b1062" /gene_synonym="ECK1047; JW1049" /db_xref="ECOCYC:EG10806" /db_xref="EcoGene:EG10806" /db_xref="GeneID:945787" CDS complement(1120784..1121830) /gene="pyrC" /locus_tag="b1062" /gene_synonym="ECK1047; JW1049" /EC_number="3.5.2.3" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="dihydro-orotase" /protein_id="NP_415580.1" /db_xref="GI:16129025" /db_xref="ASAP:ABE-0003607" /db_xref="UniProtKB/Swiss-Prot:P05020" /db_xref="ECOCYC:EG10806" /db_xref="EcoGene:EG10806" /db_xref="GeneID:945787" /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMP NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAA KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIES VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV PFLAGETVRWSVKQ" mat_peptide complement(1120787..1121827) /gene="pyrC" /locus_tag="b1062" /gene_synonym="ECK1047; JW1049" /product="dihydro-orotase" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene complement(1121936..1122496) /gene="yceB" /locus_tag="b1063" /gene_synonym="ECK1048; JW1050" /db_xref="ECOCYC:EG11117" /db_xref="EcoGene:EG11117" /db_xref="GeneID:947377" CDS complement(1121936..1122496) /gene="yceB" /locus_tag="b1063" /gene_synonym="ECK1048; JW1050" /codon_start=1 /transl_table=11 /product="lipoprotein, DUF1439 family" /protein_id="NP_415581.1" /db_xref="GI:16129026" /db_xref="ASAP:ABE-0003611" /db_xref="UniProtKB/Swiss-Prot:P0AB26" /db_xref="ECOCYC:EG11117" /db_xref="EcoGene:EG11117" /db_xref="GeneID:947377" /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS QGEAMAKKLAKGIEVKPGEIVIPFTD" gene complement(1122630..1123277) /gene="grxB" /locus_tag="b1064" /gene_synonym="ECK1049; JW1051" /db_xref="ECOCYC:EG12688" /db_xref="EcoGene:EG12688" /db_xref="GeneID:946926" CDS complement(1122630..1123277) /gene="grxB" /locus_tag="b1064" /gene_synonym="ECK1049; JW1051" /function="carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /experiment="N-terminus verified by Edman degradation: PMID 7937896" /note="glutaredoxin 2" /codon_start=1 /transl_table=11 /product="glutaredoxin 2 (Grx2)" /protein_id="NP_415582.1" /db_xref="GI:16129027" /db_xref="ASAP:ABE-0003615" /db_xref="UniProtKB/Swiss-Prot:P0AC59" /db_xref="ECOCYC:EG12688" /db_xref="EcoGene:EG12688" /db_xref="GeneID:946926" /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI" gene complement(1123341..1124549) /gene="mdtH" /locus_tag="b1065" /gene_synonym="ECK1050; JW1052; yceL" /db_xref="ECOCYC:G6559" /db_xref="EcoGene:EG13878" /db_xref="GeneID:946920" CDS complement(1123341..1124549) /gene="mdtH" /locus_tag="b1065" /gene_synonym="ECK1050; JW1052; yceL" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin" /protein_id="NP_415583.4" /db_xref="GI:90111209" /db_xref="ASAP:ABE-0003618" /db_xref="UniProtKB/Swiss-Prot:P69367" /db_xref="ECOCYC:G6559" /db_xref="EcoGene:EG13878" /db_xref="GeneID:946920" /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR LMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR AARRLLERDA" gene 1124785..1125369 /gene="rimJ" /locus_tag="b1066" /gene_synonym="ECK1051; JW1053; tcp" /db_xref="ECOCYC:EG10851" /db_xref="EcoGene:EG10851" /db_xref="GeneID:946910" CDS 1124785..1125369 /gene="rimJ" /locus_tag="b1066" /gene_synonym="ECK1051; JW1053; tcp" /EC_number="2.3.1.128" /function="enzyme; Ribosomes - maturation and modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006464 - protein modification process" /note="acetylation of N-terminal alanine of 30S ribosomal subunit protein S5" /codon_start=1 /transl_table=11 /product="ribosomal-protein-S5-alanine N-acetyltransferase" /protein_id="NP_415584.1" /db_xref="GI:16129029" /db_xref="ASAP:ABE-0003622" /db_xref="UniProtKB/Swiss-Prot:P0A948" /db_xref="ECOCYC:EG10851" /db_xref="EcoGene:EG10851" /db_xref="GeneID:946910" /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR" gene 1125380..1126027 /gene="yceH" /locus_tag="b1067" /gene_synonym="ECK1052; JW1054" /db_xref="ECOCYC:EG11537" /db_xref="EcoGene:EG11537" /db_xref="GeneID:945633" CDS 1125380..1126027 /gene="yceH" /locus_tag="b1067" /gene_synonym="ECK1052; JW1054" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0502 family" /protein_id="NP_415585.1" /db_xref="GI:16129030" /db_xref="ASAP:ABE-0003625" /db_xref="UniProtKB/Swiss-Prot:P29217" /db_xref="ECOCYC:EG11537" /db_xref="EcoGene:EG11537" /db_xref="GeneID:945633" /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL ITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE NRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD" gene 1126029..1126952 /gene="yceM" /locus_tag="b1068" /gene_synonym="ECK1053; JW1055; mviM; mviS" /db_xref="ECOCYC:G6560" /db_xref="EcoGene:EG13879" /db_xref="GeneID:945204" CDS 1126029..1126952 /gene="yceM" /locus_tag="b1068" /gene_synonym="ECK1053; JW1055; mviM; mviS" /function="putative factor; Not classified" /note="putative virulence factor" /codon_start=1 /transl_table=11 /product="predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain" /protein_id="NP_415586.1" /db_xref="GI:16129031" /db_xref="ASAP:ABE-0003627" /db_xref="UniProtKB/Swiss-Prot:P75931" /db_xref="ECOCYC:G6560" /db_xref="EcoGene:EG13879" /db_xref="GeneID:945204" /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALP ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD AERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIEC VQNQTVPQTAGEQAVLAQRIVDKIWRDAMSE" gene 1127062..1128597 /gene="murJ" /locus_tag="b1069" /gene_synonym="ECK1054; JW1056; mviN; mviS; yceN" /db_xref="ECOCYC:G6561" /db_xref="EcoGene:EG13880" /db_xref="GeneID:945487" CDS 1127062..1128597 /gene="murJ" /locus_tag="b1069" /gene_synonym="ECK1054; JW1056; mviN; mviS; yceN" /function="putative factor; Not classified" /note="putative virulence factor" /codon_start=1 /transl_table=11 /product="probable peptidoglycan lipid II flippase required for murein synthesis" /protein_id="NP_415587.1" /db_xref="GI:16129032" /db_xref="ASAP:ABE-0003630" /db_xref="UniProtKB/Swiss-Prot:P0AF16" /db_xref="ECOCYC:G6561" /db_xref="EcoGene:EG13880" /db_xref="GeneID:945487" /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPR INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR RTV" gene complement(1128637..1129053) /gene="flgN" /locus_tag="b1070" /gene_synonym="ECK1055; JW1057" /db_xref="ECOCYC:G6562" /db_xref="EcoGene:EG12665" /db_xref="GeneID:945634" CDS complement(1128637..1129053) /gene="flgN" /locus_tag="b1070" /gene_synonym="ECK1055; JW1057" /function="phenotype; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0006457 - protein folding; GO:0042330 - taxis" /note="protein of flagellar biosynthesis" /codon_start=1 /transl_table=11 /product="export chaperone for FlgK and FlgL" /protein_id="NP_415588.1" /db_xref="GI:16129033" /db_xref="ASAP:ABE-0003632" /db_xref="UniProtKB/Swiss-Prot:P43533" /db_xref="ECOCYC:G6562" /db_xref="EcoGene:EG12665" /db_xref="GeneID:945634" /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE QKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI" gene complement(1129058..1129351) /gene="flgM" /locus_tag="b1071" /gene_synonym="ECK1056; JW1058; mviS" /db_xref="ECOCYC:G369" /db_xref="EcoGene:EG12664" /db_xref="GeneID:946684" CDS complement(1129058..1129351) /gene="flgM" /locus_tag="b1071" /gene_synonym="ECK1056; JW1058; mviS" /function="factor; Surface structures" /GO_component="GO:0005737 - cytoplasm; GO:0019861 - flagellum" /GO_process="GO:0042330 - taxis; GO:0006350 - transcription" /note="anti-FliA (anti-sigma) factor; also known as RflB protein" /codon_start=1 /transl_table=11 /product="anti-sigma factor for FliA (sigma 28)" /protein_id="NP_415589.1" /db_xref="GI:16129034" /db_xref="ASAP:ABE-0003634" /db_xref="UniProtKB/Swiss-Prot:P0AEM4" /db_xref="ECOCYC:G369" /db_xref="EcoGene:EG12664" /db_xref="GeneID:946684" /translation="MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLS DAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN" gene complement(1129427..1130086) /gene="flgA" /locus_tag="b1072" /gene_synonym="ECK1057; flaU; JW1059" /db_xref="ECOCYC:G357" /db_xref="EcoGene:EG20263" /db_xref="GeneID:946300" CDS complement(1129427..1130086) /gene="flgA" /locus_tag="b1072" /gene_synonym="ECK1057; flaU; JW1059" /function="putative structure; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis; assembly of basal-body periplasmic P ring" /codon_start=1 /transl_table=11 /product="assembly protein for flagellar basal-body periplasmic P ring" /protein_id="NP_415590.1" /db_xref="GI:16129035" /db_xref="ASAP:ABE-0003637" /db_xref="UniProtKB/Swiss-Prot:P75933" /db_xref="ECOCYC:G357" /db_xref="EcoGene:EG20263" /db_xref="GeneID:946300" /translation="MLIIKRSVAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVR VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM PIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAW RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILIN L" gene 1130241..1130657 /gene="flgB" /locus_tag="b1073" /gene_synonym="ECK1058; flbA; JW1060" /db_xref="ECOCYC:G358" /db_xref="EcoGene:EG14266" /db_xref="GeneID:945678" CDS 1130241..1130657 /gene="flgB" /locus_tag="b1073" /gene_synonym="ECK1058; flbA; JW1060" /function="structural component; Surface structures" /GO_component="GO:0019861 - flagellum; GO:0042597 - periplasmic space" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis, cell-proximal portion of basal-body rod" /codon_start=1 /transl_table=11 /product="flagellar component of cell-proximal portion of basal-body rod" /protein_id="NP_415591.1" /db_xref="GI:16129036" /db_xref="ASAP:ABE-0003641" /db_xref="UniProtKB/Swiss-Prot:P0ABW9" /db_xref="ECOCYC:G358" /db_xref="EcoGene:EG14266" /db_xref="GeneID:945678" /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDID FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDM DRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN" gene 1130661..1131065 /gene="flgC" /locus_tag="b1074" /gene_synonym="ECK1059; flaW; JW1061" /db_xref="ECOCYC:G359" /db_xref="EcoGene:EG14267" /db_xref="GeneID:946687" CDS 1130661..1131065 /gene="flgC" /locus_tag="b1074" /gene_synonym="ECK1059; flaW; JW1061" /function="structural component; Surface structures" /GO_component="GO:0019861 - flagellum; GO:0042597 - periplasmic space" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis, cell-proximal portion of basal-body rod" /codon_start=1 /transl_table=11 /product="flagellar component of cell-proximal portion of basal-body rod" /protein_id="NP_415592.1" /db_xref="GI:16129037" /db_xref="ASAP:ABE-0003643" /db_xref="UniProtKB/Swiss-Prot:P0ABX2" /db_xref="ECOCYC:G359" /db_xref="EcoGene:EG14267" /db_xref="GeneID:946687" /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ" gene 1131077..1131772 /gene="flgD" /locus_tag="b1075" /gene_synonym="ECK1060; flaV; JW1062" /db_xref="ECOCYC:G360" /db_xref="EcoGene:EG14268" /db_xref="GeneID:945813" CDS 1131077..1131772 /gene="flgD" /locus_tag="b1075" /gene_synonym="ECK1060; flaV; JW1062" /function="putative structure; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis, initiation of hook assembly" /codon_start=1 /transl_table=11 /product="flagellar hook assembly protein" /protein_id="NP_415593.1" /db_xref="GI:16129038" /db_xref="ASAP:ABE-0003645" /db_xref="UniProtKB/Swiss-Prot:P75936" /db_xref="ECOCYC:G360" /db_xref="EcoGene:EG14268" /db_xref="GeneID:945813" /translation="MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLK NQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVH SFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGT YGTTTLDEVRQII" gene 1131797..1133005 /gene="flgE" /locus_tag="b1076" /gene_synonym="ECK1061; flaK; JW1063" /db_xref="ECOCYC:G361" /db_xref="EcoGene:EG14269" /db_xref="GeneID:945636" CDS 1131797..1133005 /gene="flgE" /locus_tag="b1076" /gene_synonym="ECK1061; flaK; JW1063" /function="structural component; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis, hook protein" /codon_start=1 /transl_table=11 /product="flagellar hook protein" /protein_id="NP_415594.1" /db_xref="GI:16129039" /db_xref="ASAP:ABE-0003647" /db_xref="UniProtKB/Swiss-Prot:P75937" /db_xref="ECOCYC:G361" /db_xref="EcoGene:EG14269" /db_xref="GeneID:945636" /translation="MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD QILNTLVNLR" gene 1133025..1133780 /gene="flgF" /locus_tag="b1077" /gene_synonym="ECK1062; flaX; JW1064" /db_xref="ECOCYC:G362" /db_xref="EcoGene:EG14270" /db_xref="GeneID:945639" CDS 1133025..1133780 /gene="flgF" /locus_tag="b1077" /gene_synonym="ECK1062; flaX; JW1064" /function="structural component; Surface structures" /GO_component="GO:0019861 - flagellum; GO:0042597 - periplasmic space" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis, cell-proximal portion of basal-body rod" /codon_start=1 /transl_table=11 /product="flagellar component of cell-proximal portion of basal-body rod" /protein_id="NP_415595.1" /db_xref="GI:16129040" /db_xref="ASAP:ABE-0003649" /db_xref="UniProtKB/Swiss-Prot:P75938" /db_xref="ECOCYC:G362" /db_xref="EcoGene:EG14270" /db_xref="GeneID:945639" /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV PVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRN GSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMS DMIASARRFEMQMKVISSVDDNAGRANQLLSMS" repeat_region 1133809..1133906 /note="RIP100 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 1133952..1134734 /gene="flgG" /locus_tag="b1078" /gene_synonym="ECK1063; flaL; JW1065" /db_xref="ECOCYC:G363" /db_xref="EcoGene:EG14271" /db_xref="GeneID:945647" CDS 1133952..1134734 /gene="flgG" /locus_tag="b1078" /gene_synonym="ECK1063; flaL; JW1065" /function="structural component; Surface structures" /GO_component="GO:0019861 - flagellum; GO:0042597 - periplasmic space" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis, cell-distal portion of basal-body rod" /codon_start=1 /transl_table=11 /product="flagellar component of cell-distal portion of basal-body rod" /protein_id="NP_415596.1" /db_xref="GI:16129041" /db_xref="ASAP:ABE-0003652" /db_xref="UniProtKB/Swiss-Prot:P0ABX5" /db_xref="ECOCYC:G363" /db_xref="EcoGene:EG14271" /db_xref="GeneID:945647" /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL" gene 1134787..1135485 /gene="flgH" /locus_tag="b1079" /gene_synonym="ECK1064; flaY; JW5153" /db_xref="ECOCYC:G364" /db_xref="EcoGene:EG20264" /db_xref="GeneID:946996" CDS 1134787..1135485 /gene="flgH" /locus_tag="b1079" /gene_synonym="ECK1064; flaY; JW5153" /function="structural component; Surface structures" /GO_component="GO:0009279 - cell outer membrane; GO:0019861 - flagellum; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein" /codon_start=1 /transl_table=11 /product="flagellar protein of basal-body outer-membrane L ring" /protein_id="NP_415597.1" /db_xref="GI:16129042" /db_xref="ASAP:ABE-0003654" /db_xref="UniProtKB/Swiss-Prot:P0A6S0" /db_xref="ECOCYC:G364" /db_xref="EcoGene:EG20264" /db_xref="GeneID:946996" /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQN MGWLQRFFLNLSPM" gene 1135497..1136594 /gene="flgI" /locus_tag="b1080" /gene_synonym="ECK1065; flaM; JW1067" /db_xref="ECOCYC:G365" /db_xref="EcoGene:EG20265" /db_xref="GeneID:947534" CDS 1135497..1136594 /gene="flgI" /locus_tag="b1080" /gene_synonym="ECK1065; flaM; JW1067" /function="putative structure; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="homolog of Salmonella P-ring of flagella basal body" /codon_start=1 /transl_table=11 /product="predicted flagellar basal body protein" /protein_id="NP_415598.3" /db_xref="GI:49176076" /db_xref="ASAP:ABE-0003656" /db_xref="UniProtKB/Swiss-Prot:P0A6S3" /db_xref="ECOCYC:G365" /db_xref="EcoGene:EG20265" /db_xref="GeneID:947534" /translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQL NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRA LNALGATPMDLMSILQSMQSAGCLRAKLEII" gene 1136594..1137535 /gene="flgJ" /locus_tag="b1081" /gene_synonym="ECK1066; flaZ; JW1068" /db_xref="ECOCYC:G366" /db_xref="EcoGene:EG14272" /db_xref="GeneID:947456" CDS 1136594..1137535 /gene="flgJ" /locus_tag="b1081" /gene_synonym="ECK1066; flaZ; JW1068" /function="putative structure; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0042330 - taxis" /note="flagellar biosynthesis" /codon_start=1 /transl_table=11 /product="muramidase" /protein_id="NP_415599.1" /db_xref="GI:16129044" /db_xref="ASAP:ABE-0003658" /db_xref="UniProtKB/Swiss-Prot:P75942" /db_xref="ECOCYC:G366" /db_xref="EcoGene:EG14272" /db_xref="GeneID:947456" /translation="MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMF VQMMLKSMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQ PLPEESTPAAPMKFPLETVVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPA QLASQQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITT TEYENGEAKKVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQGAQALQDAG YATDPHYARKLTNMIQQMKSISDKVSKTYSMNIDNLF" gene 1137601..1139244 /gene="flgK" /locus_tag="b1082" /gene_synonym="ECK1067; flaS; JW1069" /db_xref="ECOCYC:EG11967" /db_xref="EcoGene:EG11967" /db_xref="GeneID:945648" CDS 1137601..1139244 /gene="flgK" /locus_tag="b1082" /gene_synonym="ECK1067; flaS; JW1069" /function="structural component; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0006457 - protein folding; GO:0042330 - taxis" /note="flagellar biosynthesis, hook-filament junction protein 1" /codon_start=1 /transl_table=11 /product="flagellar hook-filament junction protein 1" /protein_id="NP_415600.1" /db_xref="GI:16129045" /db_xref="ASAP:ABE-0003660" /db_xref="UniProtKB/Swiss-Prot:P33235" /db_xref="ECOCYC:EG11967" /db_xref="EcoGene:EG11967" /db_xref="GeneID:945648" /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPA VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEEDAGDSDNRNGQ ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSIS GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR" gene 1139256..1140209 /gene="flgL" /locus_tag="b1083" /gene_synonym="ECK1068; flaT; JW1070" /db_xref="ECOCYC:EG11545" /db_xref="EcoGene:EG11545" /db_xref="GeneID:945646" CDS 1139256..1140209 /gene="flgL" /locus_tag="b1083" /gene_synonym="ECK1068; flaT; JW1070" /function="structural component; Surface structures" /GO_component="GO:0019861 - flagellum" /GO_process="GO:0009296 - flagellum assembly; GO:0006457 - protein folding; GO:0042330 - taxis" /note="flagellar biosynthesis; hook-filament junction protein" /codon_start=1 /transl_table=11 /product="flagellar hook-filament junction protein" /protein_id="NP_415601.1" /db_xref="GI:16129046" /db_xref="ASAP:ABE-0003666" /db_xref="UniProtKB/Swiss-Prot:P29744" /db_xref="ECOCYC:EG11545" /db_xref="EcoGene:EG11545" /db_xref="GeneID:945646" /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI AASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL SDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS EADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMS DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLSK" gene complement(1140405..1143590) /gene="rne" /locus_tag="b1084" /gene_synonym="ams; ECK1069; hmp1; JW1071; smbB" /db_xref="ECOCYC:EG10859" /db_xref="EcoGene:EG10859" /db_xref="GeneID:945641" CDS complement(1140405..1143590) /gene="rne" /locus_tag="b1084" /gene_synonym="ams; ECK1069; hmp1; JW1071; smbB" /EC_number="3.1.4.-" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 2011493" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006401 - RNA catabolic process" /note="RNase E, membrane attachment, mRNA turnover, maturation 5S RNA" /codon_start=1 /transl_table=11 /product="fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein" /protein_id="NP_415602.1" /db_xref="GI:16129047" /db_xref="ASAP:ABE-0003668" /db_xref="UniProtKB/Swiss-Prot:P21513" /db_xref="ECOCYC:EG10859" /db_xref="EcoGene:EG10859" /db_xref="GeneID:945641" /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPA QPGLLSRFFGALKALFSGGEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRR RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV VAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV EEQREQEEVHVQPMVTEVPVAAAIEPVVSAPVVEEVAGVVEAPVQVAEPQPEVVETTH PEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQEETADIEEVVETAEVVVAEPE VVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVPEAPRHSDWQR PTFAFEGKGAAGGHTATHHASAAPARPQPVE" gene 1143725..1144045 /gene="yceQ" /locus_tag="b1085" /gene_synonym="ECK1070; JW5154" /db_xref="ECOCYC:G6563" /db_xref="EcoGene:EG14413" /db_xref="GeneID:945640" CDS 1143725..1144045 /gene="yceQ" /locus_tag="b1085" /gene_synonym="ECK1070; JW5154" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415603.2" /db_xref="GI:90111210" /db_xref="ASAP:ABE-0003672" /db_xref="UniProtKB/Swiss-Prot:P62066" /db_xref="ECOCYC:G6563" /db_xref="EcoGene:EG14413" /db_xref="GeneID:945640" /translation="MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKD QYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFF TSCW" gene 1144163..1145122 /gene="rluC" /locus_tag="b1086" /gene_synonym="ECK1071; JW1072; yceC" /db_xref="ECOCYC:EG11118" /db_xref="EcoGene:EG11118" /db_xref="GeneID:945637" CDS 1144163..1145122 /gene="rluC" /locus_tag="b1086" /gene_synonym="ECK1071; JW1072; yceC" /EC_number="4.2.1.70" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA pseudouridine synthase; specific to U955, U2504, and U2580" /protein_id="NP_415604.1" /db_xref="GI:16129049" /db_xref="ASAP:ABE-0003675" /db_xref="UniProtKB/Swiss-Prot:P0AA39" /db_xref="ECOCYC:EG11118" /db_xref="EcoGene:EG11118" /db_xref="GeneID:945637" /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL RSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR" repeat_region 1145151..1145225 /note="REP101 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1145234..1145818) /gene="yceF" /locus_tag="b1087" /gene_synonym="ECK1072; JW5155" /db_xref="ECOCYC:EG11438" /db_xref="EcoGene:EG11438" /db_xref="GeneID:945631" CDS complement(1145234..1145818) /gene="yceF" /locus_tag="b1087" /gene_synonym="ECK1072; JW5155" /codon_start=1 /transl_table=11 /product="Maf-like protein" /protein_id="NP_415605.2" /db_xref="GI:90111211" /db_xref="ASAP:ABE-0003678" /db_xref="UniProtKB/Swiss-Prot:P0A729" /db_xref="ECOCYC:EG11438" /db_xref="EcoGene:EG11438" /db_xref="GeneID:945631" /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF YTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITL FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG" gene 1145812..1145980 /gene="psrD" /locus_tag="b4418" /gene_synonym="ECK1073; JWR0228; pke20; psrA4; sraB" /db_xref="ECOCYC:G0-8862" /db_xref="EcoGene:EG31138" /db_xref="GeneID:2847755" ncRNA 1145812..1145980 /gene="psrD" /locus_tag="b4418" /gene_synonym="ECK1073; JWR0228; pke20; psrA4; sraB" /ncRNA_class="other" /product="novel Novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047242" /db_xref="ECOCYC:G0-8862" /db_xref="EcoGene:EG31138" /db_xref="GeneID:2847755" gene 1146017..1146538 /gene="yceD" /locus_tag="b1088" /gene_synonym="ECK1074; JW1074" /db_xref="ECOCYC:EG11119" /db_xref="EcoGene:EG11119" /db_xref="GeneID:945650" CDS 1146017..1146538 /gene="yceD" /locus_tag="b1088" /gene_synonym="ECK1074; JW1074" /codon_start=1 /transl_table=11 /product="conserved protein, DUF177 family" /protein_id="NP_415606.1" /db_xref="GI:16129051" /db_xref="ASAP:ABE-0003684" /db_xref="UniProtKB/Swiss-Prot:P0AB28" /db_xref="ECOCYC:EG11119" /db_xref="EcoGene:EG11119" /db_xref="GeneID:945650" /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQK PNPFAVLASLKRK" gene 1146590..1146763 /gene="rpmF" /locus_tag="b1089" /gene_synonym="ECK1075; JW1075" /db_xref="ECOCYC:EG10890" /db_xref="EcoGene:EG10890" /db_xref="GeneID:945657" CDS 1146590..1146763 /gene="rpmF" /locus_tag="b1089" /gene_synonym="ECK1075; JW1075" /function="structural component; Ribosomal proteins - synthesis, modification" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0003735 - structural constituent of ribosome" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L32" /protein_id="NP_415607.1" /db_xref="GI:16129052" /db_xref="ASAP:ABE-0003686" /db_xref="UniProtKB/Swiss-Prot:P0A7N4" /db_xref="ECOCYC:EG10890" /db_xref="EcoGene:EG10890" /db_xref="GeneID:945657" /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT ADGYYRGRKVIAK" mat_peptide 1146593..1146760 /gene="rpmF" /locus_tag="b1089" /gene_synonym="ECK1075; JW1075" /product="50S ribosomal subunit protein L32" /experiment="N-terminus verified by Edman degradation: PMID 765258,9868784,10739205" gene 1146844..1147914 /gene="plsX" /locus_tag="b1090" /gene_synonym="ECK1076; JW5156" /db_xref="ECOCYC:EG11437" /db_xref="EcoGene:EG11437" /db_xref="GeneID:946165" CDS 1146844..1147914 /gene="plsX" /locus_tag="b1090" /gene_synonym="ECK1076; JW5156" /function="phenotype; Macromolecule synthesis, modification: Phospholipids" /GO_process="GO:0008654 - phospholipid biosynthetic process" /note="glycerolphosphate auxotrophy in plsB background" /codon_start=1 /transl_table=11 /product="probable phosphate acyltransferase" /protein_id="NP_415608.2" /db_xref="GI:90111212" /db_xref="ASAP:ABE-0003692" /db_xref="UniProtKB/Swiss-Prot:P27247" /db_xref="ECOCYC:EG11437" /db_xref="EcoGene:EG11437" /db_xref="GeneID:946165" /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNSDA ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQAC VSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA RLESVYPAGFELLDGGKSGTLR" gene 1147982..1148935 /gene="fabH" /locus_tag="b1091" /gene_synonym="ECK1077; JW1077" /db_xref="ECOCYC:EG10277" /db_xref="EcoGene:EG10277" /db_xref="GeneID:946003" CDS 1147982..1148935 /gene="fabH" /locus_tag="b1091" /gene_synonym="ECK1077; JW1077" /EC_number="2.3.1.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 1551888" /GO_component="GO:0005737 - cytoplasm" /note="3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase III" /protein_id="NP_415609.1" /db_xref="GI:16129054" /db_xref="ASAP:ABE-0003696" /db_xref="UniProtKB/Swiss-Prot:P0A6R0" /db_xref="ECOCYC:EG10277" /db_xref="EcoGene:EG10277" /db_xref="GeneID:946003" /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG CPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF" gene 1148951..1149880 /gene="fabD" /locus_tag="b1092" /gene_synonym="ECK1078; JW1078; tfpA" /db_xref="ECOCYC:EG11317" /db_xref="EcoGene:EG11317" /db_xref="GeneID:945766" CDS 1148951..1149880 /gene="fabD" /locus_tag="b1092" /gene_synonym="ECK1078; JW1078; tfpA" /EC_number="2.3.1.39" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="malonyl-CoA-[acyl-carrier-protein] transacylase" /protein_id="NP_415610.1" /db_xref="GI:16129055" /db_xref="ASAP:ABE-0003698" /db_xref="UniProtKB/Swiss-Prot:P0AAI9" /db_xref="ECOCYC:EG11317" /db_xref="EcoGene:EG11317" /db_xref="GeneID:945766" /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL" mat_peptide 1148954..1149877 /gene="fabD" /locus_tag="b1092" /gene_synonym="ECK1078; JW1078; tfpA" /product="malonyl-CoA-[acyl-carrier-protein] transacylase" /experiment="N-terminus verified by Edman degradation: PMID 1339356,8740179,9298646" gene 1149893..1150627 /gene="fabG" /locus_tag="b1093" /gene_synonym="ECK1079; JW1079" /db_xref="ECOCYC:EG11318" /db_xref="EcoGene:EG11318" /db_xref="GeneID:945645" CDS 1149893..1150627 /gene="fabG" /locus_tag="b1093" /gene_synonym="ECK1079; JW1079" /EC_number="1.1.1.100" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] reductase" /protein_id="NP_415611.1" /db_xref="GI:16129056" /db_xref="ASAP:ABE-0003700" /db_xref="UniProtKB/Swiss-Prot:P0AEK2" /db_xref="ECOCYC:EG11318" /db_xref="EcoGene:EG11318" /db_xref="GeneID:945645" /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA VAFLASDEAAYITGETLHVNGGMYMV" gene 1150838..1151074 /gene="acpP" /locus_tag="b1094" /gene_synonym="ECK1080; JW1080" /db_xref="ECOCYC:EG50003" /db_xref="EcoGene:EG50003" /db_xref="GeneID:944805" CDS 1150838..1151074 /gene="acpP" /locus_tag="b1094" /gene_synonym="ECK1080; JW1080" /function="carrier; Fatty acid and phosphatidic acid biosynthesis" /GO_process="GO:0042967 - acyl-carrier-protein biosynthetic process" /note="acyl carrier protein" /codon_start=1 /transl_table=11 /product="acyl carrier protein (ACP)" /protein_id="NP_415612.1" /db_xref="GI:16129057" /db_xref="ASAP:ABE-0003703" /db_xref="UniProtKB/Swiss-Prot:P0A6A8" /db_xref="ECOCYC:EG50003" /db_xref="EcoGene:EG50003" /db_xref="GeneID:944805" /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA" mat_peptide 1150841..1151071 /gene="acpP" /locus_tag="b1094" /gene_synonym="ECK1080; JW1080" /product="acyl carrier protein (ACP)" /experiment="N-terminus verified by Edman degradation: PMID 2062368,3549687,4882207,9119048" gene 1151162..1152403 /gene="fabF" /locus_tag="b1095" /gene_synonym="cvc; ECK1081; fabJ; JW1081; vtr" /db_xref="ECOCYC:EG12606" /db_xref="EcoGene:EG12606" /db_xref="GeneID:946665" CDS 1151162..1152403 /gene="fabF" /locus_tag="b1095" /gene_synonym="cvc; ECK1081; fabJ; JW1081; vtr" /EC_number="2.3.1.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase II" /protein_id="NP_415613.1" /db_xref="GI:16129058" /db_xref="ASAP:ABE-0003705" /db_xref="UniProtKB/Swiss-Prot:P0AAI5" /db_xref="ECOCYC:EG12606" /db_xref="EcoGene:EG12606" /db_xref="GeneID:946665" /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSS TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGME YTLCNSFGFGGTNGSLIFKKI" mat_peptide 1151165..1152400 /gene="fabF" /locus_tag="b1095" /gene_synonym="cvc; ECK1081; fabJ; JW1081; vtr" /product="3-oxoacyl-[acyl-carrier-protein] synthase II" /experiment="N-terminus verified by Edman degradation: PMID 7972002" gene 1152523..1153332 /gene="pabC" /locus_tag="b1096" /gene_synonym="ECK1082; JW1082" /db_xref="ECOCYC:EG11493" /db_xref="EcoGene:EG11493" /db_xref="GeneID:946647" CDS 1152523..1153332 /gene="pabC" /locus_tag="b1096" /gene_synonym="ECK1082; JW1082" /EC_number="4.1.3.38" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /experiment="N-terminus verified by Edman degradation: PMID 1644759,2071583" /GO_process="GO:0046656 - folic acid biosynthetic process" /note="4-amino-4-deoxychorismate lyase" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex" /protein_id="NP_415614.1" /db_xref="GI:16129059" /db_xref="ASAP:ABE-0003709" /db_xref="UniProtKB/Swiss-Prot:P28305" /db_xref="ECOCYC:EG11493" /db_xref="EcoGene:EG11493" /db_xref="GeneID:946647" /translation="MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ RLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR ILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE VQASLEESLQADEMVICNALMPVMPVCACGDVSFSSATLYEYLAPLCERPN" gene 1153335..1154357 /gene="yceG" /locus_tag="b1097" /gene_synonym="ECK1083; JW1083" /db_xref="ECOCYC:EG11494" /db_xref="EcoGene:EG11494" /db_xref="GeneID:945660" CDS 1153335..1154357 /gene="yceG" /locus_tag="b1097" /gene_synonym="ECK1083; JW1083" /function="putative enzyme; Not classified" /note="putative thymidylate kinase" /codon_start=1 /transl_table=11 /product="predicted aminodeoxychorismate lyase" /protein_id="NP_415615.1" /db_xref="GI:16129060" /db_xref="ASAP:ABE-0003712" /db_xref="UniProtKB/Swiss-Prot:P28306" /db_xref="ECOCYC:EG11494" /db_xref="EcoGene:EG11494" /db_xref="GeneID:945660" /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE TAVASERDKVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL KEKNAQ" gene 1154347..1154988 /gene="tmk" /locus_tag="b1098" /gene_synonym="ECK1084; JW1084; ycfG" /db_xref="ECOCYC:EG12302" /db_xref="EcoGene:EG12302" /db_xref="GeneID:945663" CDS 1154347..1154988 /gene="tmk" /locus_tag="b1098" /gene_synonym="ECK1084; JW1084; ycfG" /EC_number="2.7.4.9" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /GO_process="GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="NP_415616.1" /db_xref="GI:16129061" /db_xref="ASAP:ABE-0003714" /db_xref="UniProtKB/Swiss-Prot:P0A720" /db_xref="ECOCYC:EG12302" /db_xref="EcoGene:EG12302" /db_xref="GeneID:945663" /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA" gene 1154985..1155989 /gene="holB" /locus_tag="b1099" /gene_synonym="ECK1085; JW1085" /db_xref="ECOCYC:EG11500" /db_xref="EcoGene:EG11500" /db_xref="GeneID:945661" CDS 1154985..1155989 /gene="holB" /locus_tag="b1099" /gene_synonym="ECK1085; JW1085" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 8505303" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III, delta prime subunit" /protein_id="NP_415617.1" /db_xref="GI:16129062" /db_xref="ASAP:ABE-0003716" /db_xref="UniProtKB/Swiss-Prot:P28631" /db_xref="ECOCYC:EG11500" /db_xref="EcoGene:EG11500" /db_xref="GeneID:945661" /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNE HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL" gene 1156000..1156797 /gene="ycfH" /locus_tag="b1100" /gene_synonym="ECK1086; JW1086" /db_xref="ECOCYC:EG12303" /db_xref="EcoGene:EG12303" /db_xref="GeneID:945656" CDS 1156000..1156797 /gene="ycfH" /locus_tag="b1100" /gene_synonym="ECK1086; JW1086" /codon_start=1 /transl_table=11 /product="predicted DNAse" /protein_id="NP_415618.1" /db_xref="GI:16129063" /db_xref="ASAP:ABE-0003719" /db_xref="UniProtKB/Swiss-Prot:P0AFQ7" /db_xref="ECOCYC:EG12303" /db_xref="EcoGene:EG12303" /db_xref="GeneID:945656" /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR" gene 1157092..1158525 /gene="ptsG" /locus_tag="b1101" /gene_synonym="car; cat; CR; ECK1087; glcA; JW1087; tgl; umg; umgC" /db_xref="ECOCYC:EG10787" /db_xref="EcoGene:EG10787" /db_xref="GeneID:945651" CDS 1157092..1158525 /gene="ptsG" /locus_tag="b1101" /gene_synonym="car; cat; CR; ECK1087; glcA; JW1087; tgl; umg; umgC" /EC_number="2.7.1.69" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /experiment="N-terminus verified by Edman degradation: PMID 3023349" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0016052 - carbohydrate catabolic process; GO:0006464 - protein modification process" /note="PTS system, glucose-specific IIBC component" /codon_start=1 /transl_table=11 /product="fused glucose-specific PTS enzymes: IIB component/IIC component" /protein_id="NP_415619.1" /db_xref="GI:16129064" /db_xref="ASAP:ABE-0003722" /db_xref="UniProtKB/Swiss-Prot:P69786" /db_xref="ECOCYC:EG10787" /db_xref="EcoGene:EG10787" /db_xref="GeneID:945651" /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDG TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV AGSGVQAIFGTKSDNLKTEMDEYIRNH" gene complement(1158585..1160774) /gene="fhuE" /locus_tag="b1102" /gene_synonym="ECK1088; JW1088" /db_xref="ECOCYC:EG10306" /db_xref="EcoGene:EG10306" /db_xref="GeneID:945649" CDS complement(1158585..1160774) /gene="fhuE" /locus_tag="b1102" /gene_synonym="ECK1088; JW1088" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006826 - iron ion transport" /note="outer membrane receptor for ferric iron uptake" /codon_start=1 /transl_table=11 /product="ferric-rhodotorulic acid outer membrane transporter" /protein_id="NP_415620.1" /db_xref="GI:16129065" /db_xref="ASAP:ABE-0003724" /db_xref="UniProtKB/Swiss-Prot:P16869" /db_xref="ECOCYC:EG10306" /db_xref="EcoGene:EG10306" /db_xref="GeneID:945649" /translation="MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETV IVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM ENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDG KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQQFADTWQATLNATHSEVE FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST YASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQ STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF TRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGTPRNFSITGTYQF" mat_peptide complement(1158588..1160666) /gene="fhuE" /locus_tag="b1102" /gene_synonym="ECK1088; JW1088" /product="ferric-rhodotorulic acid outer membrane transporter" /experiment="N-terminus verified by Edman degradation: PMID 3032906,10529396" gene 1161108..1161467 /gene="hinT" /locus_tag="b1103" /gene_synonym="ECK1089; JW1089; ycfF" /db_xref="ECOCYC:EG12172" /db_xref="EcoGene:EG12172" /db_xref="GeneID:948549" CDS 1161108..1161467 /gene="hinT" /locus_tag="b1103" /gene_synonym="ECK1089; JW1089; ycfF" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="purine nucleoside phosphoramidase" /protein_id="NP_415621.3" /db_xref="GI:49176077" /db_xref="ASAP:ABE-0003729" /db_xref="UniProtKB/Swiss-Prot:P0ACE7" /db_xref="ECOCYC:EG12172" /db_xref="EcoGene:EG12172" /db_xref="GeneID:948549" /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP NILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM HLLGGRPLGPMLAHKGL" gene 1161470..1161847 /gene="ycfL" /locus_tag="b1104" /gene_synonym="ECK1090; JW1090" /db_xref="ECOCYC:G6564" /db_xref="EcoGene:EG13430" /db_xref="GeneID:948539" CDS 1161470..1161847 /gene="ycfL" /locus_tag="b1104" /gene_synonym="ECK1090; JW1090" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415622.1" /db_xref="GI:16129067" /db_xref="ASAP:ABE-0003731" /db_xref="UniProtKB/Swiss-Prot:P75946" /db_xref="ECOCYC:G6564" /db_xref="EcoGene:EG13430" /db_xref="GeneID:948539" /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI SAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH SAVTLYGSANFLGAHKVRLYLYL" gene 1161861..1162502 /gene="ycfM" /locus_tag="b1105" /gene_synonym="ECK1091; JW5157" /db_xref="ECOCYC:G6565" /db_xref="EcoGene:EG13431" /db_xref="GeneID:948536" CDS 1161861..1162502 /gene="ycfM" /locus_tag="b1105" /gene_synonym="ECK1091; JW5157" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein" /protein_id="NP_415623.1" /db_xref="GI:16129068" /db_xref="ASAP:ABE-0003733" /db_xref="UniProtKB/Swiss-Prot:P0AB38" /db_xref="ECOCYC:G6565" /db_xref="EcoGene:EG13431" /db_xref="GeneID:948536" /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ PVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSV LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ" gene 1162483..1163307 /gene="thiK" /locus_tag="b1106" /gene_synonym="ECK1092; JW1092; ycfN" /db_xref="ECOCYC:G6566" /db_xref="EcoGene:EG13432" /db_xref="GeneID:948525" CDS 1162483..1163307 /gene="thiK" /locus_tag="b1106" /gene_synonym="ECK1092; JW1092; ycfN" /EC_number="2.7.1.89" /function="putative enzyme; Not classified" /note="putative beta-glucosidase" /codon_start=1 /transl_table=11 /product="thiamin kinase" /protein_id="NP_415624.1" /db_xref="GI:16129069" /db_xref="ASAP:ABE-0003735" /db_xref="UniProtKB/Swiss-Prot:P75948" /db_xref="ECOCYC:G6566" /db_xref="EcoGene:EG13432" /db_xref="GeneID:948525" /translation="MPFRSNNPITRDELLSRFFPQYHPVTTFNSGLSGGSFLIEHQGQ RFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGAVKTYLPD TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYA TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ" gene 1163318..1164343 /gene="nagZ" /locus_tag="b1107" /gene_synonym="ECK1093; JW1093; ycfO" /db_xref="ECOCYC:G6567" /db_xref="EcoGene:EG13433" /db_xref="GeneID:945671" CDS 1163318..1164343 /gene="nagZ" /locus_tag="b1107" /gene_synonym="ECK1093; JW1093; ycfO" /EC_number="3.2.1.52" /GO_process="GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="beta N-acetyl-glucosaminidase" /protein_id="NP_415625.1" /db_xref="GI:16129070" /db_xref="ASAP:ABE-0003737" /db_xref="UniProtKB/Swiss-Prot:P75949" /db_xref="ECOCYC:G6567" /db_xref="EcoGene:EG13433" /db_xref="GeneID:945671" /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE LVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGW LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKT TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSD VDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERW QEEKAGH" gene 1164366..1164908 /gene="ycfP" /locus_tag="b1108" /gene_synonym="ECK1094; JW5158" /db_xref="ECOCYC:G6568" /db_xref="EcoGene:EG13434" /db_xref="GeneID:945676" CDS 1164366..1164908 /gene="ycfP" /locus_tag="b1108" /gene_synonym="ECK1094; JW5158" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415626.4" /db_xref="GI:90111213" /db_xref="ASAP:ABE-0003740" /db_xref="UniProtKB/Swiss-Prot:P0A8E1" /db_xref="ECOCYC:G6568" /db_xref="EcoGene:EG13434" /db_xref="GeneID:945676" /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT HKFKNISPHLQRIKAFKTLG" repeat_region 1164962..1165036 /note="REP102 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 1165308..1166612 /gene="ndh" /locus_tag="b1109" /gene_synonym="ECK1095; JW1095" /db_xref="ECOCYC:EG10649" /db_xref="EcoGene:EG10649" /db_xref="GeneID:946792" CDS 1165308..1166612 /gene="ndh" /locus_tag="b1109" /gene_synonym="ECK1095; JW1095" /EC_number="1.16.1.-" /EC_number="1.6.99.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009060 - aerobic respiration; GO:0009061 - anaerobic respiration" /note="respiratory NADH dehydrogenase" /codon_start=1 /transl_table=11 /product="respiratory NADH dehydrogenase 2/cupric reductase" /protein_id="NP_415627.1" /db_xref="GI:16129072" /db_xref="ASAP:ABE-0003746" /db_xref="UniProtKB/Swiss-Prot:P00393" /db_xref="ECOCYC:EG10649" /db_xref="EcoGene:EG10649" /db_xref="GeneID:946792" /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE RILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI KAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAA HQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH" mat_peptide 1165311..1166609 /gene="ndh" /locus_tag="b1109" /gene_synonym="ECK1095; JW1095" /product="respiratory NADH dehydrogenase 2/cupric reductase" /experiment="N-terminus verified by Edman degradation: PMID 6265208" repeat_region 1166625..1166654 /note="REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1166822..1167361 /gene="ycfJ" /locus_tag="b1110" /gene_synonym="ECK1096; JW1096" /db_xref="ECOCYC:EG12444" /db_xref="EcoGene:EG12444" /db_xref="GeneID:945977" CDS 1166822..1167361 /gene="ycfJ" /locus_tag="b1110" /gene_synonym="ECK1096; JW1096" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415628.1" /db_xref="GI:16129073" /db_xref="ASAP:ABE-0003752" /db_xref="UniProtKB/Swiss-Prot:P0AB35" /db_xref="ECOCYC:EG12444" /db_xref="EcoGene:EG12444" /db_xref="GeneID:945977" /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD PGTQIPLDSNGQLILNNKV" gene complement(1167423..1168055) /gene="ycfQ" /locus_tag="b1111" /gene_synonym="ECK1097; JW5159" /db_xref="ECOCYC:G6569" /db_xref="EcoGene:EG13435" /db_xref="GeneID:947425" CDS complement(1167423..1168055) /gene="ycfQ" /locus_tag="b1111" /gene_synonym="ECK1097; JW5159" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="predicted DNA-binding transcriptional regulator" /protein_id="NP_415629.4" /db_xref="GI:90111214" /db_xref="ASAP:ABE-0003754" /db_xref="UniProtKB/Swiss-Prot:P75952" /db_xref="ECOCYC:G6569" /db_xref="EcoGene:EG13435" /db_xref="GeneID:947425" /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE IPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK" gene 1168296..1168553 /gene="bhsA" /locus_tag="b1112" /gene_synonym="ECK1098; JW1098; ycfR" /db_xref="ECOCYC:G6570" /db_xref="EcoGene:EG13436" /db_xref="GeneID:945492" CDS 1168296..1168553 /gene="bhsA" /locus_tag="b1112" /gene_synonym="ECK1098; JW1098; ycfR" /codon_start=1 /transl_table=11 /product="biofilm, cell surface and signaling protein" /protein_id="NP_415630.1" /db_xref="GI:16129075" /db_xref="ASAP:ABE-0003758" /db_xref="UniProtKB/Swiss-Prot:P0AB40" /db_xref="ECOCYC:G6570" /db_xref="EcoGene:EG13436" /db_xref="GeneID:945492" /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAG TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK" gene complement(1168635..1169597) /gene="ycfS" /locus_tag="b1113" /gene_synonym="ECK1099; JW5820" /db_xref="ECOCYC:G6571" /db_xref="EcoGene:EG13437" /db_xref="GeneID:945666" CDS complement(1168635..1169597) /gene="ycfS" /locus_tag="b1113" /gene_synonym="ECK1099; JW5820" /function="enzyme; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="L,D-transpeptidase linking Lpp to murein" /protein_id="NP_415631.1" /db_xref="GI:16129076" /db_xref="ASAP:ABE-0003760" /db_xref="UniProtKB/Swiss-Prot:P75954" /db_xref="ECOCYC:G6571" /db_xref="EcoGene:EG13437" /db_xref="GeneID:945666" /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN IRARYKAQGIELPAVVPAGLDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL" gene complement(1169741..1173187) /gene="mfd" /locus_tag="b1114" /gene_synonym="ECK1100; JW1100" /db_xref="ECOCYC:EG11619" /db_xref="EcoGene:EG11619" /db_xref="GeneID:945681" CDS complement(1169741..1173187) /gene="mfd" /locus_tag="b1114" /gene_synonym="ECK1100; JW1100" /function="factor; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006350 - transcription" /note="transcription-repair coupling factor; mutation frequency decline" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="NP_415632.1" /db_xref="GI:16129077" /db_xref="ASAP:ABE-0003763" /db_xref="UniProtKB/Swiss-Prot:P30958" /db_xref="ECOCYC:EG11619" /db_xref="EcoGene:EG11619" /db_xref="GeneID:945681" /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW PRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVV REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI ASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIE FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA IA" gene complement(1173315..1174388) /gene="ycfT" /locus_tag="b1115" /gene_synonym="ECK1101; JW1101" /db_xref="ECOCYC:G6572" /db_xref="EcoGene:EG13438" /db_xref="GeneID:945679" CDS complement(1173315..1174388) /gene="ycfT" /locus_tag="b1115" /gene_synonym="ECK1101; JW1101" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="NP_415633.1" /db_xref="GI:16129078" /db_xref="ASAP:ABE-0003767" /db_xref="UniProtKB/Swiss-Prot:P75955" /db_xref="ECOCYC:G6572" /db_xref="EcoGene:EG13438" /db_xref="GeneID:945679" /translation="MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLS KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL SQRAFSDLLFSPPSLPAAVSYSR" gene 1174650..1175849 /gene="lolC" /locus_tag="b1116" /gene_synonym="ECK1102; JW5161; ycfU" /db_xref="ECOCYC:G6573" /db_xref="EcoGene:EG13439" /db_xref="GeneID:945673" CDS 1174650..1175849 /gene="lolC" /locus_tag="b1116" /gene_synonym="ECK1102; JW5161; ycfU" /experiment="N-terminus verified by Edman degradation: PMID 10783239" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="lipoprotein-releasing system transmembrane protein" /protein_id="NP_415634.1" /db_xref="GI:16129079" /db_xref="ASAP:ABE-0003772" /db_xref="UniProtKB/Swiss-Prot:P0ADC3" /db_xref="ECOCYC:G6573" /db_xref="EcoGene:EG13439" /db_xref="GeneID:945673" /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD QIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGN ITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGA LLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP AEALRYE" gene 1175842..1176543 /gene="lolD" /locus_tag="b1117" /gene_synonym="ECK1103; JW5162; ycfV" /db_xref="ECOCYC:G6574" /db_xref="EcoGene:EG13440" /db_xref="GeneID:945670" CDS 1175842..1176543 /gene="lolD" /locus_tag="b1117" /gene_synonym="ECK1103; JW5162; ycfV" /function="putative transport; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 10783239" /GO_component="GO:0005737 - cytoplasm" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="outer membrane-specific lipoprotein transporter subunit" /protein_id="NP_415635.4" /db_xref="GI:90111215" /db_xref="ASAP:ABE-0003774" /db_xref="UniProtKB/Swiss-Prot:P75957" /db_xref="ECOCYC:G6574" /db_xref="EcoGene:EG13440" /db_xref="GeneID:945670" /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF TALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARAL VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM RDGRLTAELSLMGAE" gene 1176543..1177787 /gene="lolE" /locus_tag="b1118" /gene_synonym="ECK1104; JW1104; ycfW" /db_xref="ECOCYC:G6575" /db_xref="EcoGene:EG13441" /db_xref="GeneID:945665" CDS 1176543..1177787 /gene="lolE" /locus_tag="b1118" /gene_synonym="ECK1104; JW1104; ycfW" /function="putative enzyme; Not classified" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative kinase; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="lipoprotein-releasing system transmembrane protein" /protein_id="NP_415636.1" /db_xref="GI:16129081" /db_xref="ASAP:ABE-0003776" /db_xref="UniProtKB/Swiss-Prot:P75958" /db_xref="ECOCYC:G6575" /db_xref="EcoGene:EG13441" /db_xref="GeneID:945665" /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG LSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTG LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG SSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL LASWYPARRASNIDPARVLSGQ" mat_peptide 1176546..1177784 /gene="lolE" /locus_tag="b1118" /gene_synonym="ECK1104; JW1104; ycfW" /product="lipoprotein-releasing system transmembrane protein" /experiment="N-terminus verified by Edman degradation: PMID 10783239" gene 1177816..1178727 /gene="nagK" /locus_tag="b1119" /gene_synonym="ECK1105; JW1105; ycfX" /db_xref="ECOCYC:G6576" /db_xref="EcoGene:EG13442" /db_xref="GeneID:945664" CDS 1177816..1178727 /gene="nagK" /locus_tag="b1119" /gene_synonym="ECK1105; JW1105; ycfX" /EC_number="2.7.1.59" /experiment="N-terminus verified by Edman degradation: PMID 15489439" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="N-acetyl-D-glucosamine kinase" /protein_id="NP_415637.1" /db_xref="GI:16129082" /db_xref="ASAP:ABE-0003778" /db_xref="UniProtKB/Swiss-Prot:P75959" /db_xref="ECOCYC:G6576" /db_xref="EcoGene:EG13442" /db_xref="GeneID:945664" /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC ELVAEADQRFGCKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQG DEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPV ARVPRIERARHGDAGGMRGAAFLHLTD" gene 1178743..1179582 /gene="cobB" /locus_tag="b1120" /gene_synonym="ECK1106; JW1106; ycfY" /db_xref="ECOCYC:G6577" /db_xref="EcoGene:EG13443" /db_xref="GeneID:945687" CDS 1178743..1179582 /gene="cobB" /locus_tag="b1120" /gene_synonym="ECK1106; JW1106; ycfY" /function="putative enzyme; Biosynthesis of cofactors, carriers: Cobalamin" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /note="putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="deacetylase of acetyl-CoA synthetase" /protein_id="NP_415638.1" /db_xref="GI:16129083" /db_xref="ASAP:ABE-0003781" /db_xref="UniProtKB/Swiss-Prot:P75960" /db_xref="ECOCYC:G6577" /db_xref="EcoGene:EG13443" /db_xref="GeneID:945687" /translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP EIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGLKAG SIA" repeat_region 1179577..1179672 /note="RIP104 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1179702..1180490) /gene="ycfZ" /locus_tag="b1121" /gene_synonym="ECK1107; JW1107" /db_xref="ECOCYC:G6578" /db_xref="EcoGene:EG13444" /db_xref="GeneID:945685" CDS complement(1179702..1180490) /gene="ycfZ" /locus_tag="b1121" /gene_synonym="ECK1107; JW1107" /function="putative factor; Not classified" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="NP_415639.1" /db_xref="GI:16129084" /db_xref="ASAP:ABE-0003784" /db_xref="UniProtKB/Swiss-Prot:P75961" /db_xref="ECOCYC:G6578" /db_xref="EcoGene:EG13444" /db_xref="GeneID:945685" /translation="MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEI AHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTR EPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQST PPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTI ANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR" gene complement(1180487..1180948) /gene="ymfA" /locus_tag="b1122" /gene_synonym="ECK1108; JW5164" /db_xref="ECOCYC:G6579" /db_xref="EcoGene:EG13445" /db_xref="GeneID:945684" CDS complement(1180487..1180948) /gene="ymfA" /locus_tag="b1122" /gene_synonym="ECK1108; JW5164" /codon_start=1 /transl_table=11 /product="conserved inner membrane protein" /protein_id="NP_415640.2" /db_xref="GI:90111216" /db_xref="ASAP:ABE-0003786" /db_xref="UniProtKB/Swiss-Prot:P75962" /db_xref="ECOCYC:G6579" /db_xref="EcoGene:EG13445" /db_xref="GeneID:945684" /translation="MSQDSKVFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVI VDTVWHSSHSHRTGKDGSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSP GHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP" gene complement(1181006..1182052) /gene="potD" /locus_tag="b1123" /gene_synonym="ECK1109; JW1109" /db_xref="ECOCYC:EG10752" /db_xref="EcoGene:EG10752" /db_xref="GeneID:945682" CDS complement(1181006..1182052) /gene="potD" /locus_tag="b1123" /gene_synonym="ECK1109; JW1109" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process" /note="spermidine/putrescine periplasmic transport protein; periplasmic-binding component of ABC superfamily" /codon_start=1 /transl_table=11 /product="polyamine transporter subunit" /protein_id="NP_415641.1" /db_xref="GI:16129086" /db_xref="ASAP:ABE-0003789" /db_xref="UniProtKB/Swiss-Prot:P0AFK9" /db_xref="ECOCYC:EG10752" /db_xref="EcoGene:EG10752" /db_xref="GeneID:945682" /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS SIYEEYYQKLKAGR" mat_peptide complement(1181009..1181983) /gene="potD" /locus_tag="b1123" /gene_synonym="ECK1109; JW1109" /product="polyamine transporter subunit" /experiment="N-terminus verified by Edman degradation: PMID 1939142,8740179,9298646" gene complement(1182049..1182843) /gene="potC" /locus_tag="b1124" /gene_synonym="ECK1110; JW1110" /db_xref="ECOCYC:EG10751" /db_xref="EcoGene:EG10751" /db_xref="GeneID:945691" CDS complement(1182049..1182843) /gene="potC" /locus_tag="b1124" /gene_synonym="ECK1110; JW1110" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process" /note="spermidine/putrescine transport system permease; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="polyamine transporter subunit" /protein_id="NP_415642.1" /db_xref="GI:16129087" /db_xref="ASAP:ABE-0003791" /db_xref="UniProtKB/Swiss-Prot:P0AFK6" /db_xref="ECOCYC:EG10751" /db_xref="EcoGene:EG10751" /db_xref="GeneID:945691" /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK" gene complement(1182840..1183667) /gene="potB" /locus_tag="b1125" /gene_synonym="ECK1111; JW1111" /db_xref="ECOCYC:EG10750" /db_xref="EcoGene:EG10750" /db_xref="GeneID:945692" CDS complement(1182840..1183667) /gene="potB" /locus_tag="b1125" /gene_synonym="ECK1111; JW1111" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process" /note="spermidine/putrescine transport system permease; membrane component of ABC superfamily" /codon_start=1 /transl_table=11 /product="polyamine transporter subunit" /protein_id="NP_415643.3" /db_xref="GI:162135921" /db_xref="ASAP:ABE-0003794" /db_xref="UniProtKB/Swiss-Prot:P0AFK4" /db_xref="ECOCYC:EG10750" /db_xref="EcoGene:EG10750" /db_xref="GeneID:945692" /translation="MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYT RLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTN SLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLY SSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLM GGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE" gene complement(1183681..1184817) /gene="potA" /locus_tag="b1126" /gene_synonym="ECK1112; JW1112" /db_xref="ECOCYC:EG10749" /db_xref="EcoGene:EG10749" /db_xref="GeneID:946323" CDS complement(1183681..1184817) /gene="potA" /locus_tag="b1126" /gene_synonym="ECK1112; JW1112" /function="transport; Transport of small molecules: Amino acids, amines" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009310 - amine catabolic process; GO:0006596 - polyamine biosynthetic process" /note="ATP-binding component of spermidine/putrescine transport" /codon_start=1 /transl_table=11 /product="polyamine transporter subunit" /protein_id="NP_415644.1" /db_xref="GI:16129089" /db_xref="ASAP:ABE-0003796" /db_xref="UniProtKB/Swiss-Prot:P69874" /db_xref="ECOCYC:EG10749" /db_xref="EcoGene:EG10749" /db_xref="GeneID:946323" /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI VVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK" gene 1185067..1186293 /gene="pepT" /locus_tag="b1127" /gene_synonym="ECK1113; JW1113" /db_xref="ECOCYC:EG11549" /db_xref="EcoGene:EG11549" /db_xref="GeneID:946333" CDS 1185067..1186293 /gene="pepT" /locus_tag="b1127" /gene_synonym="ECK1113; JW1113" /function="putative enzyme; Not classified" /note="putative peptidase T" /codon_start=1 /transl_table=11 /product="peptidase T" /protein_id="NP_415645.1" /db_xref="GI:16129090" /db_xref="ASAP:ABE-0003800" /db_xref="UniProtKB/Swiss-Prot:P29745" /db_xref="ECOCYC:EG11549" /db_xref="EcoGene:EG11549" /db_xref="GeneID:946333" /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKKI PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLASMKGTVERADMH YIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK AVQVIVRIAELTAQRK" repeat_region 1186306..1186329 /note="REP105 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1186342..1187463) /gene="ycfD" /locus_tag="b1128" /gene_synonym="ECK1114; JW1114" /db_xref="ECOCYC:EG11430" /db_xref="EcoGene:EG11430" /db_xref="GeneID:945391" CDS complement(1186342..1187463) /gene="ycfD" /locus_tag="b1128" /gene_synonym="ECK1114; JW1114" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415646.4" /db_xref="GI:90111217" /db_xref="ASAP:ABE-0003802" /db_xref="UniProtKB/Swiss-Prot:P27431" /db_xref="ECOCYC:EG11430" /db_xref="EcoGene:EG11430" /db_xref="GeneID:945391" /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR HELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG" gene complement(1187539..1188999) /gene="phoQ" /locus_tag="b1129" /gene_synonym="ECK1115; JW1115" /db_xref="ECOCYC:EG10732" /db_xref="EcoGene:EG10732" /db_xref="GeneID:946326" CDS complement(1187539..1188999) /gene="phoQ" /locus_tag="b1129" /gene_synonym="ECK1115; JW1115" /function="enzyme; Global regulatory functions" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0006464 - protein modification process" /note="sensor protein PhoQ" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with PhoP" /protein_id="NP_415647.1" /db_xref="GI:16129092" /db_xref="ASAP:ABE-0003805" /db_xref="UniProtKB/Swiss-Prot:P23837" /db_xref="ECOCYC:EG10732" /db_xref="EcoGene:EG10732" /db_xref="GeneID:946326" /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE" gene complement(1188999..1189670) /gene="phoP" /locus_tag="b1130" /gene_synonym="ECK1116; JW1116" /db_xref="ECOCYC:EG10731" /db_xref="EcoGene:EG10731" /db_xref="GeneID:945697" CDS complement(1188999..1189670) /gene="phoP" /locus_tag="b1130" /gene_synonym="ECK1116; JW1116" /function="regulator; Global regulatory functions" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /note="transcriptional regulatory protein" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator in two-component regulatory system with PhoQ" /protein_id="NP_415648.1" /db_xref="GI:16129093" /db_xref="ASAP:ABE-0003807" /db_xref="UniProtKB/Swiss-Prot:P23836" /db_xref="ECOCYC:EG10731" /db_xref="EcoGene:EG10731" /db_xref="GeneID:945697" /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHI PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY LFELR" repeat_region 1189803..1189825 /note="REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1189839..1191209) /gene="purB" /locus_tag="b1131" /gene_synonym="ade; ECK1117; JW1117" /db_xref="ECOCYC:EG11314" /db_xref="EcoGene:EG11314" /db_xref="GeneID:945695" CDS complement(1189839..1191209) /gene="purB" /locus_tag="b1131" /gene_synonym="ade; ECK1117; JW1117" /EC_number="4.3.2.2" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 1729205" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="NP_415649.1" /db_xref="GI:16129094" /db_xref="ASAP:ABE-0003810" /db_xref="UniProtKB/Swiss-Prot:P0AB89" /db_xref="ECOCYC:EG11314" /db_xref="EcoGene:EG11314" /db_xref="GeneID:945695" /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL QKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDAARIKTIERTTNHDVKAVEYFLKE KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT MVDELK" gene complement(1191213..1191854) /gene="hflD" /locus_tag="b1132" /gene_synonym="ECK1118; hslZ; JW5165; ycfC" /db_xref="ECOCYC:EG11345" /db_xref="EcoGene:EG11345" /db_xref="GeneID:945693" CDS complement(1191213..1191854) /gene="hflD" /locus_tag="b1132" /gene_synonym="ECK1118; hslZ; JW5165; ycfC" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted lysogenization regulator" /protein_id="NP_415650.1" /db_xref="GI:16129095" /db_xref="ASAP:ABE-0003812" /db_xref="UniProtKB/Swiss-Prot:P25746" /db_xref="ECOCYC:EG11345" /db_xref="EcoGene:EG11345" /db_xref="GeneID:945693" /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS PQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL" gene complement(1191890..1192996) /gene="mnmA" /locus_tag="b1133" /gene_synonym="asuE; ECK1119; JW1119; trmU; ycfB" /db_xref="ECOCYC:EG11344" /db_xref="EcoGene:EG11344" /db_xref="GeneID:945690" CDS complement(1191890..1192996) /gene="mnmA" /locus_tag="b1133" /gene_synonym="asuE; ECK1119; JW1119; trmU; ycfB" /EC_number="2.1.1.61" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase" /protein_id="NP_415651.4" /db_xref="GI:90111218" /db_xref="ASAP:ABE-0003815" /db_xref="UniProtKB/Swiss-Prot:P25745" /db_xref="ECOCYC:EG11344" /db_xref="EcoGene:EG11344" /db_xref="GeneID:945690" /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV" gene complement(1193050..1193511) /gene="nudJ" /locus_tag="b1134" /gene_synonym="ECK1120; JW1120; ymfB" /db_xref="ECOCYC:G6580" /db_xref="EcoGene:EG13446" /db_xref="GeneID:945689" CDS complement(1193050..1193511) /gene="nudJ" /locus_tag="b1134" /gene_synonym="ECK1120; JW1120; ymfB" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase" /protein_id="NP_415652.1" /db_xref="GI:16129097" /db_xref="ASAP:ABE-0003818" /db_xref="UniProtKB/Swiss-Prot:P0AEI6" /db_xref="ECOCYC:G6580" /db_xref="EcoGene:EG13446" /db_xref="GeneID:945689" /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID CCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI" gene complement(1193521..1194174) /gene="rluE" /locus_tag="b1135" /gene_synonym="ECK1121; JW1121; ymfC" /db_xref="ECOCYC:G6581" /db_xref="EcoGene:EG13447" /db_xref="GeneID:945701" CDS complement(1193521..1194174) /gene="rluE" /locus_tag="b1135" /gene_synonym="ECK1121; JW1121; ymfC" /EC_number="4.2.1.70" /function="enzyme; rRNA modification" /GO_process="GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA U2457 pseudouridine synthase" /protein_id="NP_415653.4" /db_xref="GI:162135898" /db_xref="ASAP:ABE-0003820" /db_xref="UniProtKB/Swiss-Prot:P75966" /db_xref="ECOCYC:G6581" /db_xref="EcoGene:EG13447" /db_xref="GeneID:945701" /translation="MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILF NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD" gene 1194346..1195596 /gene="icd" /locus_tag="b1136" /gene_synonym="ECK1122; icdA; icdE; JW1122" /db_xref="ECOCYC:EG10489" /db_xref="EcoGene:EG10489" /db_xref="GeneID:945702" CDS 1194346..1195596 /gene="icd" /locus_tag="b1136" /gene_synonym="ECK1122; icdA; icdE; JW1122" /EC_number="1.1.1.42" /function="enzyme; Energy metabolism, carbon: TCA cycle; Phage or Prophage Related" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /GO_process="GO:0009061 - anaerobic respiration; GO:0006099 - tricarboxylic acid cycle" /note="isocitrate dehydrogenase, specific for NADP+" /codon_start=1 /transl_table=11 /product="e14 prophage; isocitrate dehydrogenase, specific for NADP+" /protein_id="NP_415654.1" /db_xref="GI:16129099" /db_xref="ASAP:ABE-0003823" /db_xref="UniProtKB/Swiss-Prot:P08200" /db_xref="ECOCYC:EG10489" /db_xref="EcoGene:EG10489" /db_xref="GeneID:945702" /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD FERLMDGAKLLKCSEFGDAIIENM" misc_feature 1195443..1210635 /note="cryptic prophage e14" gene complement(1196090..1196755) /gene="ymfD" /locus_tag="b1137" /gene_synonym="ECK1123; JW1123" /db_xref="ECOCYC:G6582" /db_xref="EcoGene:EG13448" /db_xref="GeneID:945329" CDS complement(1196090..1196755) /gene="ymfD" /locus_tag="b1137" /gene_synonym="ECK1123; JW1123" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted SAM-dependent methyltransferase" /protein_id="NP_415655.1" /db_xref="GI:16129100" /db_xref="ASAP:ABE-0003825" /db_xref="UniProtKB/Swiss-Prot:P75967" /db_xref="ECOCYC:G6582" /db_xref="EcoGene:EG13448" /db_xref="GeneID:945329" /translation="MVLALNYNMHGVNIRSENAAKPHTMPSRYLCEYIRSIEKNGHAL DFGCGKLRYSDELISKFDEVTFLDSKRQLEREQIIRGIKTKIIDYVPRYYKNANTVAF EDVDKIIGGYDFILCSNVLSAVPCRDTIDKIVLSIKRLLKSGGETLIVNQYKSSYFKK YETGRKHLYGYIYKNSKSVSYYGLLDELAVQEICSSHGLEILKSWSKAGSSYVTVGSC NAI" gene complement(1196756..1197460) /gene="ymfE" /locus_tag="b1138" /gene_synonym="ECK1124; JW5166" /db_xref="ECOCYC:G6583" /db_xref="EcoGene:EG13449" /db_xref="GeneID:946722" CDS complement(1196756..1197460) /gene="ymfE" /locus_tag="b1138" /gene_synonym="ECK1124; JW5166" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted inner membrane protein" /protein_id="NP_415656.1" /db_xref="GI:16129101" /db_xref="ASAP:ABE-0003827" /db_xref="UniProtKB/Swiss-Prot:P75968" /db_xref="ECOCYC:G6583" /db_xref="EcoGene:EG13449" /db_xref="GeneID:946722" /translation="MNNMFEPPKNYNEMLPKLHKATFLNTLIYCILLVIYEYIPLITL PTKYVPPIKDHESFINWALSFGILPCAFAIFAYLISGALDLHNNAAKLLRVRYLWDKH LIIKPLSRRAGVNRKLNKDEAHNVMSNLYYPEVRKIEDKHYIELFWNKVYYFWIFFEF SIIALISFLIIFFCKQMDIFHVEGSLLSLFFFVILSFSVSGIIFALTVKPRTESQVGK IPDDKIKEFFTKNNIN" gene 1197918..1198811 /gene="lit" /locus_tag="b1139" /gene_synonym="ECK1125; JW1125" /db_xref="ECOCYC:EG10535" /db_xref="EcoGene:EG10535" /db_xref="GeneID:948421" CDS 1197918..1198811 /gene="lit" /locus_tag="b1139" /gene_synonym="ECK1125; JW1125" /function="membrane; Phage or Prophage Related" /note="phage T4 late gene expression; at locus of e14 element" /codon_start=1 /transl_table=11 /product="e14 prophage; cell death peptidase, inhibitor of T4 late gene expression" /protein_id="NP_415657.1" /db_xref="GI:16129102" /db_xref="ASAP:ABE-0003834" /db_xref="UniProtKB/Swiss-Prot:P11072" /db_xref="ECOCYC:EG10535" /db_xref="EcoGene:EG10535" /db_xref="GeneID:948421" /translation="MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEP GFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKN RLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHH EISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQ SLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLD GESFSSILGDLLCDISRLTSN" gene complement(1198902..1200029) /gene="intE" /locus_tag="b1140" /gene_synonym="ECK1126; int; JW1126; ycfI" /db_xref="ECOCYC:EG12370" /db_xref="EcoGene:EG12370" /db_xref="GeneID:948034" CDS complement(1198902..1200029) /gene="intE" /locus_tag="b1140" /gene_synonym="ECK1126; int; JW1126; ycfI" /function="Phage or Prophage Related" /note="prophage e14 integrase" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted integrase" /protein_id="NP_415658.1" /db_xref="GI:16129103" /db_xref="ASAP:ABE-0003836" /db_xref="UniProtKB/Swiss-Prot:P75969" /db_xref="ECOCYC:EG12370" /db_xref="EcoGene:EG12370" /db_xref="GeneID:948034" /translation="MAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTN EAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSG DIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLI DVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAML LALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARC RDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRS LSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL" gene complement(1200010..1200255) /gene="xisE" /locus_tag="b1141" /gene_synonym="ECK1127; JW1127; Vxis; ymfG" /db_xref="ECOCYC:G6585" /db_xref="EcoGene:EG14245" /db_xref="GeneID:945705" CDS complement(1200010..1200255) /gene="xisE" /locus_tag="b1141" /gene_synonym="ECK1127; JW1127; Vxis; ymfG" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted excisionase" /protein_id="NP_415659.1" /db_xref="GI:16129104" /db_xref="ASAP:ABE-0003838" /db_xref="UniProtKB/Swiss-Prot:P75970" /db_xref="ECOCYC:G6585" /db_xref="EcoGene:EG14245" /db_xref="GeneID:945705" /translation="MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRL WRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA" gene 1200720..1201061 /gene="ymfI" /locus_tag="b1143" /gene_synonym="ECK1129; JW5168" /db_xref="ECOCYC:G6587" /db_xref="EcoGene:EG14247" /db_xref="GeneID:945712" CDS 1200720..1201061 /gene="ymfI" /locus_tag="b1143" /gene_synonym="ECK1129; JW5168" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted protein" /protein_id="NP_415661.2" /db_xref="GI:90111220" /db_xref="ASAP:ABE-0003846" /db_xref="UniProtKB/Swiss-Prot:P75972" /db_xref="ECOCYC:G6587" /db_xref="EcoGene:EG14247" /db_xref="GeneID:945712" /translation="MNQFYVHVRLFEDTAEQTKKFEELMLNFLYQKTVKESDDSCCRL IPEGYILKSTMNCQQILDQTFSIANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHY DLTPKPIKLDS" gene complement(1200999..1201307) /gene="ymfJ" /locus_tag="b1144" /gene_synonym="ECK1130" /db_xref="ECOCYC:G6588" /db_xref="EcoGene:EG14248" /db_xref="GeneID:945718" CDS complement(1200999..1201307) /gene="ymfJ" /locus_tag="b1144" /gene_synonym="ECK1130" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted protein" /protein_id="NP_415662.2" /db_xref="GI:90111221" /db_xref="ASAP:ABE-0003848" /db_xref="UniProtKB/Swiss-Prot:P75973" /db_xref="ECOCYC:G6588" /db_xref="EcoGene:EG14248" /db_xref="GeneID:945718" /translation="MNEQNLKHVIALLLEDAKRLQQIEPNAGTEARILLAKQALKTCG AQAPGRTEFMNFMANTLTPLPCNGEKVSRVYHDTMVKALRIELDGLRRKIVMNEIVTN" gene complement(1201482..1202156) /gene="cohE" /locus_tag="b1145" /gene_synonym="ECK1131; JW1131; ymfK" /db_xref="ECOCYC:G6589" /db_xref="EcoGene:EG14249" /db_xref="GeneID:945719" CDS complement(1201482..1202156) /gene="cohE" /locus_tag="b1145" /gene_synonym="ECK1131; JW1131; ymfK" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; repressor protein phage e14" /protein_id="NP_415663.1" /db_xref="GI:16129108" /db_xref="ASAP:ABE-0003851" /db_xref="UniProtKB/Swiss-Prot:P75974" /db_xref="ECOCYC:G6589" /db_xref="EcoGene:EG14249" /db_xref="GeneID:945719" /translation="MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGA TKNIGDSMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGA WKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHG DDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSIIGTVIFSGKPR RYKIKA" gene 1202247..1202447 /gene="croE" /locus_tag="b1146" /gene_synonym="ECK4469; ymfT" /db_xref="ECOCYC:G6590" /db_xref="EcoGene:EG14414" /db_xref="GeneID:945720" CDS 1202247..1202447 /gene="croE" /locus_tag="b1146" /gene_synonym="ECK4469; ymfT" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted DNA-binding transcriptional regulator" /protein_id="NP_415664.2" /db_xref="GI:90111222" /db_xref="ASAP:ABE-0003856" /db_xref="ECOCYC:G6590" /db_xref="EcoGene:EG14414" /db_xref="GeneID:945720" /translation="MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKK LEQYTSGAITKSDLRPDIYPKD" gene 1202491..1203048 /gene="ymfL" /locus_tag="b1147" /gene_synonym="ECK1133; JW1133" /db_xref="ECOCYC:G6591" /db_xref="EcoGene:EG14250" /db_xref="GeneID:945717" CDS 1202491..1203048 /gene="ymfL" /locus_tag="b1147" /gene_synonym="ECK1133; JW1133" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted DNA-binding transcriptional regulator" /protein_id="NP_415665.2" /db_xref="GI:145698241" /db_xref="ASAP:ABE-0003860" /db_xref="UniProtKB/Swiss-Prot:P75976" /db_xref="ECOCYC:G6591" /db_xref="EcoGene:EG14250" /db_xref="GeneID:945717" /translation="MGKHHWKIEKQPEWYVKAVRKTIAALPSGYAEAADWLDVTENAL FNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQR LLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISE SNDARECAAPGVVASIASGCGETNA" gene 1203045..1203383 /gene="ymfM" /locus_tag="b1148" /gene_synonym="ECK1134; JW1134" /db_xref="ECOCYC:G6592" /db_xref="EcoGene:EG14251" /db_xref="GeneID:945715" CDS 1203045..1203383 /gene="ymfM" /locus_tag="b1148" /gene_synonym="ECK1134; JW1134" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted protein" /protein_id="NP_415666.1" /db_xref="GI:16129111" /db_xref="ASAP:ABE-0003862" /db_xref="UniProtKB/Swiss-Prot:P75977" /db_xref="ECOCYC:G6592" /db_xref="EcoGene:EG14251" /db_xref="GeneID:945715" /translation="MNSLTTHYRRSQLIALPVPGGKAKVEYCYAVNVPGDREIVTHSF AEWAVGDFNRQKETVLCDKLTAGSKITTECPSESFVGSRKHNGLSTSAKVMSMNASAR SNSFVVNSGK" gene 1203393..1203626 /gene="oweE" /locus_tag="b4692" /old_locus_tag="b1149" /gene_synonym="ECK4507" /pseudo /db_xref="EcoGene:EG14495" /db_xref="GeneID:7751644" CDS 1203393..1203626 /gene="oweE" /locus_tag="b4692" /old_locus_tag="b1149" /gene_synonym="ECK4507" /note="Pseudogene, lambda replication protein O homolog; CPS-53/KpLE1 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14495" /db_xref="GeneID:7751644" gene 1203627..1204760 /gene="aaaE" /locus_tag="b4693" /old_locus_tag="b1149" /gene_synonym="ECK1135; JW1135; ymfN" /pseudo /db_xref="EcoGene:EG14252" /db_xref="GeneID:7751645" CDS 1203627..1204760 /gene="aaaE" /locus_tag="b4693" /old_locus_tag="b1149" /gene_synonym="ECK1135; JW1135; ymfN" /note="pseudogene, phage terminase protein A family, e14 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003865" /db_xref="UniProtKB/Swiss-Prot:P75978" /db_xref="EcoGene:EG14252" /db_xref="GeneID:7751645" gene 1204772..1204954 /gene="ymfR" /locus_tag="b1150" /gene_synonym="ECK1136; JW1136" /db_xref="ECOCYC:G6594" /db_xref="EcoGene:EG14336" /db_xref="GeneID:945700" CDS 1204772..1204954 /gene="ymfR" /locus_tag="b1150" /gene_synonym="ECK1136; JW1136" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted protein" /protein_id="NP_415668.1" /db_xref="GI:16129113" /db_xref="ASAP:ABE-0003868" /db_xref="UniProtKB/Swiss-Prot:P75979" /db_xref="ECOCYC:G6594" /db_xref="EcoGene:EG14336" /db_xref="GeneID:945700" /translation="MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWL VARYLDRTQSSVGGGK" gene 1204954..1205365 /gene="beeE" /locus_tag="b1151" /gene_synonym="ECK1137; JW1137; ymfO" /pseudo /db_xref="ECOCYC:G6595" /db_xref="EcoGene:EG14253" /db_xref="GeneID:945698" CDS 1204954..1205365 /gene="beeE" /locus_tag="b1151" /gene_synonym="ECK1137; JW1137; ymfO" /note="pseudogene, portal protein family, e14 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003870" /db_xref="UniProtKB/Swiss-Prot:P75980" /db_xref="ECOCYC:G6595" /db_xref="EcoGene:EG14253" /db_xref="GeneID:945698" gene 1205366..1206145 /gene="jayE" /locus_tag="b1152" /gene_synonym="ECK1138; JW5170; ymfP" /pseudo /db_xref="ECOCYC:G6596" /db_xref="EcoGene:EG14254" /db_xref="GeneID:945703" CDS 1205366..1206145 /gene="jayE" /locus_tag="b1152" /gene_synonym="ECK1138; JW5170; ymfP" /note="pseudogene, e14 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003872" /db_xref="UniProtKB/Swiss-Prot:P75981" /db_xref="ECOCYC:G6596" /db_xref="EcoGene:EG14254" /db_xref="GeneID:945703" gene 1206136..1206720 /gene="ymfQ" /locus_tag="b1153" /gene_synonym="ECK1139; JW1139" /db_xref="ECOCYC:G6597" /db_xref="EcoGene:EG14255" /db_xref="GeneID:945707" CDS 1206136..1206720 /gene="ymfQ" /locus_tag="b1153" /gene_synonym="ECK1139; JW1139" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="prohage e14 tail protein homolog" /protein_id="NP_415671.1" /db_xref="GI:16129116" /db_xref="ASAP:ABE-0003874" /db_xref="UniProtKB/Swiss-Prot:P75982" /db_xref="ECOCYC:G6597" /db_xref="EcoGene:EG14255" /db_xref="GeneID:945707" /translation="MDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRAD ALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFY LAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPATTNSTWMTCGD PCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE" gene 1206724..1207353 /gene="stfP" /locus_tag="b1154" /gene_synonym="ECK1140; JW1140; ycfK" /db_xref="ECOCYC:EG12877" /db_xref="EcoGene:EG12877" /db_xref="GeneID:945726" CDS 1206724..1207353 /gene="stfP" /locus_tag="b1154" /gene_synonym="ECK1140; JW1140; ycfK" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted protein" /protein_id="NP_415672.1" /db_xref="GI:16129117" /db_xref="ASAP:ABE-0003876" /db_xref="UniProtKB/Swiss-Prot:P45581" /db_xref="ECOCYC:EG12877" /db_xref="EcoGene:EG12877" /db_xref="GeneID:945726" /translation="MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQ EELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVQTALENLGLGEG AKLNAATATLGRTGFIAIPVMIGGIEQSVIIQWGWNAAKASASGGDGNTVVFPVAFNN ACVAVVANYDNVSAPINAVATGGYTTTSFLLRCAAQTGSYYYNWIAIGY" gene 1207355..1207768 /gene="tfaP" /locus_tag="b1155" /gene_synonym="ECK1141; JW5171; ymfS" /db_xref="ECOCYC:G6598" /db_xref="EcoGene:EG14337" /db_xref="GeneID:945724" CDS 1207355..1207768 /gene="tfaP" /locus_tag="b1155" /gene_synonym="ECK1141; JW5171; ymfS" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted protein" /protein_id="NP_415673.1" /db_xref="GI:16129118" /db_xref="ASAP:ABE-0003878" /db_xref="UniProtKB/Swiss-Prot:P09154" /db_xref="ECOCYC:G6598" /db_xref="EcoGene:EG14337" /db_xref="GeneID:945724" /translation="MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGV IDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDEL KQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR" gene complement(1207740..1208342) /gene="tfaE" /locus_tag="b1156" /gene_synonym="ECK1142; JW1142; ycfA" /db_xref="ECOCYC:EG11120" /db_xref="EcoGene:EG11120" /db_xref="GeneID:945723" CDS complement(1207740..1208342) /gene="tfaE" /locus_tag="b1156" /gene_synonym="ECK1142; JW1142; ycfA" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="e14 prophage; predicted tail fiber assembly protein" /protein_id="NP_415674.1" /db_xref="GI:16129119" /db_xref="ASAP:ABE-0003880" /db_xref="UniProtKB/Swiss-Prot:P09153" /db_xref="ECOCYC:EG11120" /db_xref="EcoGene:EG11120" /db_xref="GeneID:945723" /translation="MHKAILNSDLIATKAGDVTVYNYDGETREYISTSNEYLAVGVGI PACSCLDAPGTHKAGYAICRSADFNSWEYVPDHRGETVYSTKTGESKEIKAPGDYPEN TTTIAPLSPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAG RKLTQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA" gene complement(1208342..1208842) /gene="stfE" /locus_tag="b1157" /gene_synonym="ECK1143; JW5172; ycfE" /pseudo /db_xref="ECOCYC:G6599" /db_xref="EcoGene:EG11818" /db_xref="GeneID:945722" CDS complement(1208342..1208842) /gene="stfE" /locus_tag="b1157" /gene_synonym="ECK1143; JW5172; ycfE" /note="pseudogene, e14 prophage; predicted side tail fiber protein fragment;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003882" /db_xref="UniProtKB/Swiss-Prot:P33227" /db_xref="ECOCYC:G6599" /db_xref="EcoGene:EG11818" /db_xref="GeneID:945722" gene 1208908..1209462 /gene="pinE" /locus_tag="b1158" /gene_synonym="ECK1144; JW1144; pin" /db_xref="ECOCYC:EG10737" /db_xref="EcoGene:EG10737" /db_xref="GeneID:945721" CDS 1208908..1209462 /gene="pinE" /locus_tag="b1158" /gene_synonym="ECK1144; JW1144; pin" /function="membrane; Phage or Prophage Related" /note="inversion of adjacent DNA; at locus of e14 element" /codon_start=1 /transl_table=11 /product="e14 prophage; site-specific DNA recombinase" /protein_id="NP_415676.1" /db_xref="GI:16129121" /db_xref="ASAP:ABE-0003888" /db_xref="UniProtKB/Swiss-Prot:P03014" /db_xref="ECOCYC:EG10737" /db_xref="EcoGene:EG10737" /db_xref="GeneID:945721" /translation="MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPG LKKLLRTLSAGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTPMGR FFFHVMGALAEMERELIVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTP RQKVAIIYDVGVSTLYKRFPAGDK" gene 1209569..1210402 /gene="mcrA" /locus_tag="b1159" /gene_synonym="ECK1145; JW1145; rglA" /db_xref="ECOCYC:EG10573" /db_xref="EcoGene:EG10573" /db_xref="GeneID:945727" CDS 1209569..1210402 /gene="mcrA" /locus_tag="b1159" /gene_synonym="ECK1145; JW1145; rglA" /EC_number="3.1.21.-" /function="enzyme; Degradation of ; Phage or Prophage Related" /note="restriction of DNA at 5-methylcytosine residues; at locus of e14 element" /codon_start=1 /transl_table=11 /product="e14 prophage; 5-methylcytosine-specific restriction endonuclease B" /protein_id="NP_415677.1" /db_xref="GI:16129122" /db_xref="ASAP:ABE-0003891" /db_xref="UniProtKB/Swiss-Prot:P24200" /db_xref="ECOCYC:EG10573" /db_xref="EcoGene:EG10573" /db_xref="GeneID:945727" /translation="MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIAL DYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCG YQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNM RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYL NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQ K" gene 1210636..1210800 /gene="icdC" /locus_tag="b4519" /gene_synonym="ECK1146; icd; JW5173" /pseudo /db_xref="EcoGene:EG10009" /db_xref="GeneID:4056026" CDS 1210636..1210800 /gene="icdC" /locus_tag="b4519" /gene_synonym="ECK1146; icd; JW5173" /GO_component="GO:0005737 - cytoplasm" /note="conserved protein (pseudogene)" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285040" /db_xref="EcoGene:EG10009" /db_xref="GeneID:4056026" gene complement(1210903..1211226) /gene="iraM" /locus_tag="b1160" /gene_synonym="ECK1147; elb1; elbA; JW1147; ycgW" /db_xref="ECOCYC:G6600" /db_xref="EcoGene:EG13885" /db_xref="GeneID:945729" CDS complement(1210903..1211226) /gene="iraM" /locus_tag="b1160" /gene_synonym="ECK1147; elb1; elbA; JW1147; ycgW" /codon_start=1 /transl_table=11 /product="RpoS stabilzer during Mg starvation, anti-RssB factor" /protein_id="NP_415678.1" /db_xref="GI:16129123" /db_xref="ASAP:ABE-0003893" /db_xref="UniProtKB/Swiss-Prot:P75987" /db_xref="ECOCYC:G6600" /db_xref="EcoGene:EG13885" /db_xref="GeneID:945729" /translation="MKWIVIDTVIQPTCGISFSAIWGNMKMIIWYQSTIFLPPGSIFT PVKSGIILKDKEYPITIYHIAPFNKDLWSLLKSSQECPPGESKITNKCLHNSCIIKIC PYGLK" gene complement(1211926..1212330) /gene="ycgX" /locus_tag="b1161" /gene_synonym="ECK1148; JW1148" /db_xref="ECOCYC:G6601" /db_xref="EcoGene:EG14244" /db_xref="GeneID:945733" CDS complement(1211926..1212330) /gene="ycgX" /locus_tag="b1161" /gene_synonym="ECK1148; JW1148" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415679.1" /db_xref="GI:16129124" /db_xref="ASAP:ABE-0003897" /db_xref="UniProtKB/Swiss-Prot:P75988" /db_xref="ECOCYC:G6601" /db_xref="EcoGene:EG14244" /db_xref="GeneID:945733" /translation="MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNI RIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFR WVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI" gene complement(1212551..1213282) /gene="ycgE" /locus_tag="b1162" /gene_synonym="ECK1149; JW1149" /db_xref="ECOCYC:G6602" /db_xref="EcoGene:EG13886" /db_xref="GeneID:945735" CDS complement(1212551..1213282) /gene="ycgE" /locus_tag="b1162" /gene_synonym="ECK1149; JW1149" /function="putative regulator; Not classified" /GO_function="GO:0016564 - transcription repressor activity" /GO_process="GO:0006350 - transcription" /note="putative transcriptional regulator" /codon_start=1 /transl_table=11 /product="repressor of blue light-responsive genes" /protein_id="NP_415680.1" /db_xref="GI:16129125" /db_xref="ASAP:ABE-0003900" /db_xref="UniProtKB/Swiss-Prot:P75989" /db_xref="ECOCYC:G6602" /db_xref="EcoGene:EG13886" /db_xref="GeneID:945735" /translation="MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDE EDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRA RIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRK PGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGM APTRRQNELLQHWGEQGYKVIFHAP" gene complement(1213487..1214698) /gene="ycgF" /locus_tag="b1163" /gene_synonym="ECK1150; JW1150" /db_xref="ECOCYC:G6603" /db_xref="EcoGene:EG13887" /db_xref="GeneID:947592" CDS complement(1213487..1214698) /gene="ycgF" /locus_tag="b1163" /gene_synonym="ECK1150; JW1150" /codon_start=1 /transl_table=11 /product="anti-repressor for YcgE, blue light-responsive; FAD-binding; has c-di-GMP phosphodiesterase-like EAL domain, but does not degrade c-di-GMP" /protein_id="NP_415681.1" /db_xref="GI:16129126" /db_xref="ASAP:ABE-0003903" /db_xref="UniProtKB/Swiss-Prot:P75990" /db_xref="ECOCYC:G6603" /db_xref="EcoGene:EG13887" /db_xref="GeneID:947592" /translation="MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNG SHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHER DDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE LDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTAD LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN GIPSIAWPEKK" gene 1215012..1215248 /gene="ycgZ" /locus_tag="b1164" /gene_synonym="ECK1151; JW1151" /db_xref="ECOCYC:G6604" /db_xref="EcoGene:EG14288" /db_xref="GeneID:945885" CDS 1215012..1215248 /gene="ycgZ" /locus_tag="b1164" /gene_synonym="ECK1151; JW1151" /codon_start=1 /transl_table=11 /product="connector protein for RcsB regulation of biofilm and acid-resistance" /protein_id="NP_415682.1" /db_xref="GI:16129127" /db_xref="ASAP:ABE-0003907" /db_xref="UniProtKB/Swiss-Prot:P75991" /db_xref="ECOCYC:G6604" /db_xref="EcoGene:EG14288" /db_xref="GeneID:945885" /translation="MHQNSVTLDSAGAITRYFAKANLHTQQETLGEIVTEILKDGRNL SRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE" gene 1215291..1215563 /gene="ymgA" /locus_tag="b1165" /gene_synonym="ECK1152; JW1152" /db_xref="ECOCYC:G6605" /db_xref="EcoGene:EG14289" /db_xref="GeneID:948991" CDS 1215291..1215563 /gene="ymgA" /locus_tag="b1165" /gene_synonym="ECK1152; JW1152" /codon_start=1 /transl_table=11 /product="connector protein for RcsB regulation of biofilm" /protein_id="NP_415683.1" /db_xref="GI:16129128" /db_xref="ASAP:ABE-0003909" /db_xref="UniProtKB/Swiss-Prot:P75992" /db_xref="ECOCYC:G6605" /db_xref="EcoGene:EG14289" /db_xref="GeneID:948991" /translation="MKTSDNERIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAE EDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH" gene 1215592..1215858 /gene="ariR" /locus_tag="b1166" /gene_synonym="ECK1153; JW1153; ymgB" /db_xref="ECOCYC:G6606" /db_xref="EcoGene:EG14290" /db_xref="GeneID:945340" CDS 1215592..1215858 /gene="ariR" /locus_tag="b1166" /gene_synonym="ECK1153; JW1153; ymgB" /codon_start=1 /transl_table=11 /product="connector protein for RcsB regulation of biofilm and acid-resistance" /protein_id="NP_415684.1" /db_xref="GI:16129129" /db_xref="ASAP:ABE-0003911" /db_xref="UniProtKB/Swiss-Prot:P75993" /db_xref="ECOCYC:G6606" /db_xref="EcoGene:EG14290" /db_xref="GeneID:945340" /translation="MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLS GDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM" gene 1215971..1216219 /gene="ymgC" /locus_tag="b1167" /gene_synonym="ECK1154; JW1154" /db_xref="ECOCYC:G6607" /db_xref="EcoGene:EG14291" /db_xref="GeneID:945090" CDS 1215971..1216219 /gene="ymgC" /locus_tag="b1167" /gene_synonym="ECK1154; JW1154" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415685.1" /db_xref="GI:16129130" /db_xref="ASAP:ABE-0003915" /db_xref="UniProtKB/Swiss-Prot:P75994" /db_xref="ECOCYC:G6607" /db_xref="EcoGene:EG14291" /db_xref="GeneID:945090" /translation="MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLK DETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS" gene 1216551..1218074 /gene="ycgG" /locus_tag="b1168" /gene_synonym="ECK1155; JW5174" /db_xref="ECOCYC:G6608" /db_xref="EcoGene:EG13888" /db_xref="GeneID:945738" CDS 1216551..1218074 /gene="ycgG" /locus_tag="b1168" /gene_synonym="ECK1155; JW5174" /function="putative enzyme; Not classified" /note="putative proteases" /codon_start=1 /transl_table=11 /product="predicted cyclic-di-GMP phosphodiesterase" /protein_id="NP_415686.2" /db_xref="GI:90111225" /db_xref="ASAP:ABE-0003918" /db_xref="UniProtKB/Swiss-Prot:P75995" /db_xref="ECOCYC:G6608" /db_xref="EcoGene:EG13888" /db_xref="GeneID:945738" /translation="MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANN INHILEEASQATQTAVNIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLP GNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNV PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLI DKGFGILIFILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGT LRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEG FHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNIL HENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLAR KLSISIVAEGVETKEQLDYLNQNYITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE" gene 1218206..1218424 /gene="ymgF" /locus_tag="b4520" /gene_synonym="ECK1156; JW1156" /db_xref="ECOCYC:G0-10261" /db_xref="EcoGene:EG14341" /db_xref="GeneID:1450253" CDS 1218206..1218424 /gene="ymgF" /locus_tag="b4520" /gene_synonym="ECK1156; JW1156" /GO_component="GO:0016021 - integral to membrane" /codon_start=1 /transl_table=11 /product="inner membrane division septum protein" /protein_id="YP_588447.1" /db_xref="GI:94541105" /db_xref="ASAP:ABE-0285041" /db_xref="UniProtKB/Swiss-Prot:P58034" /db_xref="ECOCYC:G0-10261" /db_xref="EcoGene:EG14341" /db_xref="GeneID:1450253" /translation="MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTI NLLNALVWLAINLVNRLRERLVNHRDQQ" gene 1218824..1221471 /gene="ycgH" /locus_tag="b4491" /old_locus_tag="b1169" /old_locus_tag="b1170" /gene_synonym="ECK1157; JW5176; JW5901" /pseudo /db_xref="EcoGene:EG13889" /db_xref="GeneID:2847703" CDS 1218824..1221471 /gene="ycgH" /locus_tag="b4491" /old_locus_tag="b1169" /old_locus_tag="b1170" /gene_synonym="ECK1157; JW5176; JW5901" /note="Probable pseudogene; putative ATP-binding component of a transport system" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003921" /db_xref="ASAP:ABE-0003924" /db_xref="ASAP:ABE-0285092" /db_xref="EcoGene:EG13889" /db_xref="GeneID:2847703" gene complement(1221528..1221857) /gene="ymgD" /locus_tag="b1171" /gene_synonym="ECK1158; JW5177" /db_xref="ECOCYC:G6611" /db_xref="EcoGene:EG14292" /db_xref="GeneID:945732" CDS complement(1221528..1221857) /gene="ymgD" /locus_tag="b1171" /gene_synonym="ECK1158; JW5177" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415689.2" /db_xref="GI:90111226" /db_xref="ASAP:ABE-0003926" /db_xref="UniProtKB/Swiss-Prot:P0AB46" /db_xref="ECOCYC:G6611" /db_xref="EcoGene:EG14292" /db_xref="GeneID:945732" /translation="MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAK TDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDT MRAIGKK" gene complement(1221867..1222211) /gene="ymgG" /locus_tag="b1172" /gene_synonym="ECK4470" /db_xref="ECOCYC:G6612" /db_xref="EcoGene:EG14415" /db_xref="GeneID:945728" CDS complement(1221867..1222211) /gene="ymgG" /locus_tag="b1172" /gene_synonym="ECK4470" /codon_start=1 /transl_table=11 /product="conserved protein, UPF0757 family" /protein_id="NP_415690.5" /db_xref="GI:288551664" /db_xref="ASAP:ABE-0003928" /db_xref="UniProtKB/Swiss-Prot:Q7DFV3" /db_xref="ECOCYC:G6612" /db_xref="EcoGene:EG14415" /db_xref="GeneID:945728" /translation="MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNG VNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVI GGTGGAILGKMK" gene complement(1222213..1222386) /gene="ymgI" /locus_tag="b4593" /gene_synonym="ECK4403" /db_xref="ECOCYC:G0-10589" /db_xref="EcoGene:EG14449" /db_xref="GeneID:5061515" CDS complement(1222213..1222386) /gene="ymgI" /locus_tag="b4593" /gene_synonym="ECK4403" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001165314.1" /db_xref="GI:145698243" /db_xref="ECOCYC:G0-10589" /db_xref="EcoGene:EG14449" /db_xref="GeneID:5061515" /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIED EIIVCATYLIPDI" gene 1222487..1222672 /gene="ymgJ" /locus_tag="b4594" /gene_synonym="ECK4404" /db_xref="ECOCYC:G0-10590" /db_xref="EcoGene:EG14450" /db_xref="GeneID:5061516" CDS 1222487..1222672 /gene="ymgJ" /locus_tag="b4594" /gene_synonym="ECK4404" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001165315.1" /db_xref="GI:145698244" /db_xref="ECOCYC:G0-10590" /db_xref="EcoGene:EG14450" /db_xref="GeneID:5061516" /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYQKRVIFYPTTLQR TACKKCLFLMRDIIISS" gene 1222787..1223130 /gene="ycgI" /locus_tag="b4521" /old_locus_tag="b1173" /gene_synonym="ECK1161; JW1162; ymgH" /pseudo /db_xref="ECOCYC:G0-10444" /db_xref="EcoGene:EG13890" /db_xref="GeneID:1450255" CDS join(1222787..1222894,1222894..1223130) /gene="ycgI" /locus_tag="b4521" /old_locus_tag="b1173" /gene_synonym="ECK1161; JW1162; ymgH" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003933" /db_xref="ASAP:ABE-0285042" /db_xref="UniProtKB/Swiss-Prot:P76000" /db_xref="ECOCYC:G0-10444" /db_xref="EcoGene:EG13890" /db_xref="GeneID:1450255" gene complement(1223502..1223768) /gene="minE" /locus_tag="b1174" /gene_synonym="ECK1162; JW1163; minB" /db_xref="ECOCYC:EG10598" /db_xref="EcoGene:EG10598" /db_xref="GeneID:945740" CDS complement(1223502..1223768) /gene="minE" /locus_tag="b1174" /gene_synonym="ECK1162; JW1163; minB" /function="factor; Cell division" /GO_component="GO:0005737 - cytoplasm" /note="cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation" /codon_start=1 /transl_table=11 /product="cell division topological specificity factor" /protein_id="NP_415692.1" /db_xref="GI:16129137" /db_xref="ASAP:ABE-0003935" /db_xref="UniProtKB/Swiss-Prot:P0A734" /db_xref="ECOCYC:EG10598" /db_xref="EcoGene:EG10598" /db_xref="GeneID:945740" /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK" gene complement(1223772..1224584) /gene="minD" /locus_tag="b1175" /gene_synonym="ECK1163; JW1164; minB" /db_xref="ECOCYC:EG10597" /db_xref="EcoGene:EG10597" /db_xref="GeneID:945741" CDS complement(1223772..1224584) /gene="minD" /locus_tag="b1175" /gene_synonym="ECK1163; JW1164; minB" /function="enzyme; Cell division" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="cell division inhibitor, a membrane ATPase, activates minC" /codon_start=1 /transl_table=11 /product="membrane ATPase of the MinC-MinD-MinE system" /protein_id="NP_415693.1" /db_xref="GI:16129138" /db_xref="ASAP:ABE-0003938" /db_xref="UniProtKB/Swiss-Prot:P0AEZ3" /db_xref="ECOCYC:EG10597" /db_xref="EcoGene:EG10597" /db_xref="GeneID:945741" /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG" mat_peptide complement(1223775..1224581) /gene="minD" /locus_tag="b1175" /gene_synonym="ECK1163; JW1164; minB" /product="membrane ATPase of the MinC-MinD-MinE system" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene complement(1224608..1225303) /gene="minC" /locus_tag="b1176" /gene_synonym="ECK1164; JW1165; minB" /db_xref="ECOCYC:EG10596" /db_xref="EcoGene:EG10596" /db_xref="GeneID:945744" CDS complement(1224608..1225303) /gene="minC" /locus_tag="b1176" /gene_synonym="ECK1164; JW1165; minB" /function="factor; Cell division" /GO_component="GO:0005737 - cytoplasm" /note="cell division inhibitor, inhibits ftsZ ring formation" /codon_start=1 /transl_table=11 /product="cell division inhibitor" /protein_id="NP_415694.1" /db_xref="GI:16129139" /db_xref="ASAP:ABE-0003941" /db_xref="UniProtKB/Swiss-Prot:P18196" /db_xref="ECOCYC:EG10596" /db_xref="EcoGene:EG10596" /db_xref="GeneID:945744" /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK EKAPRPAPTPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL QLVENALTVQPLN" gene 1225823..1226191 /gene="ycgJ" /locus_tag="b1177" /gene_synonym="ECK1165; JW1166" /db_xref="ECOCYC:G6614" /db_xref="EcoGene:EG13891" /db_xref="GeneID:946155" CDS 1225823..1226191 /gene="ycgJ" /locus_tag="b1177" /gene_synonym="ECK1165; JW1166" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415695.1" /db_xref="GI:16129140" /db_xref="ASAP:ABE-0003946" /db_xref="UniProtKB/Swiss-Prot:P76001" /db_xref="ECOCYC:G6614" /db_xref="EcoGene:EG13891" /db_xref="GeneID:946155" /translation="MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYIC VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD GKRSGKINQTTTKMLFMCRE" gene complement(1226294..1226695) /gene="ycgK" /locus_tag="b1178" /gene_synonym="ECK1166; JW1167" /db_xref="ECOCYC:G6615" /db_xref="EcoGene:EG13892" /db_xref="GeneID:946963" CDS complement(1226294..1226695) /gene="ycgK" /locus_tag="b1178" /gene_synonym="ECK1166; JW1167" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415696.1" /db_xref="GI:16129141" /db_xref="ASAP:ABE-0003948" /db_xref="UniProtKB/Swiss-Prot:P76002" /db_xref="ECOCYC:G6615" /db_xref="EcoGene:EG13892" /db_xref="GeneID:946963" /translation="MKIKSIRKAVLLLALLTSTSFAAGKNVNVEFRKGHSSAQYSGEI KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP ASGKYELRVLQTRNDARKNKTKKYNVDIQIK" gene 1226904..1227230 /gene="ycgL" /locus_tag="b1179" /gene_synonym="ECK1167; JW1168" /db_xref="ECOCYC:G6616" /db_xref="EcoGene:EG13893" /db_xref="GeneID:946226" CDS 1226904..1227230 /gene="ycgL" /locus_tag="b1179" /gene_synonym="ECK1167; JW1168" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415697.3" /db_xref="GI:49176083" /db_xref="ASAP:ABE-0003954" /db_xref="UniProtKB/Swiss-Prot:P0AB43" /db_xref="ECOCYC:G6616" /db_xref="EcoGene:EG13893" /db_xref="GeneID:946226" /translation="MPKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMK GFGQPQLAMILPLDGRKKLVNADIEKVKQALTEQGYYLQLPPPPEDLLKQHLSVMGQK TDDTNK" gene 1227302..1227961 /gene="ycgM" /locus_tag="b1180" /gene_synonym="ECK1168; JW1169" /db_xref="ECOCYC:G6617" /db_xref="EcoGene:EG13894" /db_xref="GeneID:946115" CDS 1227302..1227961 /gene="ycgM" /locus_tag="b1180" /gene_synonym="ECK1168; JW1169" /function="putative enzyme; Not classified" /note="putative isomerase" /codon_start=1 /transl_table=11 /product="predicted isomerase/hydrolase" /protein_id="NP_415698.1" /db_xref="GI:16129143" /db_xref="ASAP:ABE-0003957" /db_xref="UniProtKB/Swiss-Prot:P76004" /db_xref="ECOCYC:G6617" /db_xref="EcoGene:EG13894" /db_xref="GeneID:946115" /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLSLSVNGEQRQQG TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV L" gene 1228038..1228499 /gene="ycgN" /locus_tag="b1181" /gene_synonym="ECK1169; JW5180" /db_xref="ECOCYC:G6618" /db_xref="EcoGene:EG13895" /db_xref="GeneID:945804" CDS 1228038..1228499 /gene="ycgN" /locus_tag="b1181" /gene_synonym="ECK1169; JW5180" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415699.5" /db_xref="GI:145698245" /db_xref="ASAP:ABE-0003960" /db_xref="UniProtKB/Swiss-Prot:P0A8L5" /db_xref="ECOCYC:G6618" /db_xref="EcoGene:EG13895" /db_xref="GeneID:945804" /translation="MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDED TDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLA EGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ" gene complement(1228706..1229617) /gene="hlyE" /locus_tag="b1182" /gene_synonym="clyA; ECK1170; hpr; JW5181; sheA; ycgD" /db_xref="ECOCYC:G6619" /db_xref="EcoGene:EG13243" /db_xref="GeneID:945745" CDS complement(1228706..1229617) /gene="hlyE" /locus_tag="b1182" /gene_synonym="clyA; ECK1170; hpr; JW5181; sheA; ycgD" /function="phenotype; Not classified" /GO_component="GO:0005576 - extracellular region" /codon_start=1 /transl_table=11 /product="hemolysin E" /protein_id="NP_415700.4" /db_xref="GI:162135899" /db_xref="ASAP:ABE-0003962" /db_xref="UniProtKB/Swiss-Prot:P77335" /db_xref="ECOCYC:G6619" /db_xref="EcoGene:EG13243" /db_xref="GeneID:945745" /translation="MTEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETI KELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLFD EYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFS EKSSYFQSQVDKIRKEAYAGAAAGVVAGPFGLIISYSIAAGVVEGKLIPELKNKLKSV QNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKE AAKKMINTCNEYQKRHGKKTLFEVPEV" mat_peptide complement(1228709..1229614) /gene="hlyE" /locus_tag="b1182" /gene_synonym="clyA; ECK1170; hpr; JW5181; sheA; ycgD" /product="hemolysin E" /experiment="N-terminus verified by Edman degradation: PMID 10027972" gene 1229990..1230409 /gene="umuD" /locus_tag="b1183" /gene_synonym="ECK1171; JW1172" /db_xref="ECOCYC:EG11057" /db_xref="EcoGene:EG11057" /db_xref="GeneID:945746" CDS 1229990..1230409 /gene="umuD" /locus_tag="b1183" /gene_synonym="ECK1171; JW1172" /EC_number="3.4.21.-" /function="putative enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006281 - DNA repair; GO:0006261 - DNA-dependent DNA replication; GO:0009432 - SOS response; GO:0006350 - transcription" /note="SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC" /codon_start=1 /transl_table=11 /product="DNA polymerase V, subunit D" /protein_id="NP_415701.1" /db_xref="GI:16129146" /db_xref="ASAP:ABE-0003974" /db_xref="UniProtKB/Swiss-Prot:P0AG11" /db_xref="ECOCYC:EG11057" /db_xref="EcoGene:EG11057" /db_xref="GeneID:945746" /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR" gene 1230409..1231677 /gene="umuC" /locus_tag="b1184" /gene_synonym="ECK1172; JW1173; uvm" /db_xref="ECOCYC:EG11056" /db_xref="EcoGene:EG11056" /db_xref="GeneID:946359" CDS 1230409..1231677 /gene="umuC" /locus_tag="b1184" /gene_synonym="ECK1172; JW1173; uvm" /function="putative enzyme; DNA - replication, repair, restriction/modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006281 - DNA repair; GO:0006261 - DNA-dependent DNA replication; GO:0009432 - SOS response" /note="SOS mutagenesis and repair" /codon_start=1 /transl_table=11 /product="DNA polymerase V, subunit C" /protein_id="NP_415702.1" /db_xref="GI:16129147" /db_xref="ASAP:ABE-0003977" /db_xref="UniProtKB/Swiss-Prot:P04152" /db_xref="ECOCYC:EG11056" /db_xref="EcoGene:EG11056" /db_xref="GeneID:946359" /translation="MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEA KALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA GQGIQQQWQMKRAMLSPRYTTRSSDLLRVK" gene complement(1231723..1232253) /gene="dsbB" /locus_tag="b1185" /gene_synonym="dsbX; ECK1173; iarB; JW5182; roxB; ycgA" /db_xref="ECOCYC:EG11393" /db_xref="EcoGene:EG11393" /db_xref="GeneID:946344" CDS complement(1231723..1232253) /gene="dsbB" /locus_tag="b1185" /gene_synonym="dsbX; ECK1173; iarB; JW5182; roxB; ycgA" /function="enzyme; Surface structures" /GO_component="GO:0019861 - flagellum; GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall; GO:0009289 - pilus" /GO_process="GO:0009296 - flagellum assembly; GO:0006457 - protein folding; GO:0042330 - taxis" /note="reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella." /codon_start=1 /transl_table=11 /product="oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I" /protein_id="NP_415703.3" /db_xref="GI:49176085" /db_xref="ASAP:ABE-0003979" /db_xref="UniProtKB/Swiss-Prot:P0A6M2" /db_xref="ECOCYC:EG11393" /db_xref="EcoGene:EG11393" /db_xref="GeneID:946344" /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV VISQPFKAKKRDLFGR" gene complement(1232399..1233940) /gene="nhaB" /locus_tag="b1186" /gene_synonym="ECK1174; JW1175" /db_xref="ECOCYC:EG11392" /db_xref="EcoGene:EG11392" /db_xref="GeneID:944822" CDS complement(1232399..1233940) /gene="nhaB" /locus_tag="b1186" /gene_synonym="ECK1174; JW1175" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009268 - response to pH" /note="Na+/H+ antiporter, pH independent" /codon_start=1 /transl_table=11 /product="sodium:proton antiporter" /protein_id="NP_415704.1" /db_xref="GI:16129149" /db_xref="ASAP:ABE-0003984" /db_xref="UniProtKB/Swiss-Prot:P0AFA7" /db_xref="ECOCYC:EG11392" /db_xref="EcoGene:EG11392" /db_xref="GeneID:944822" /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG WIATL" gene 1234161..1234880 /gene="fadR" /locus_tag="b1187" /gene_synonym="dec; ECK1175; JW1176; ole; oleR; thdB" /db_xref="ECOCYC:EG10281" /db_xref="EcoGene:EG10281" /db_xref="GeneID:948652" CDS 1234161..1234880 /gene="fadR" /locus_tag="b1187" /gene_synonym="dec; ECK1175; JW1176; ole; oleR; thdB" /function="regulator; Degradation of small molecules: Fatty acids" /GO_component="GO:0005737 - cytoplasm" /GO_function="GO:0016563 - transcription activator activity; GO:0016564 - transcription repressor activity" /GO_process="GO:0019395 - fatty acid oxidation; GO:0006350 - transcription" /note="negative regulator for fad regulon, and positive activator of fabA" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional dual regulator of fatty acid metabolism" /protein_id="NP_415705.1" /db_xref="GI:16129150" /db_xref="ASAP:ABE-0003988" /db_xref="UniProtKB/Swiss-Prot:P0A8V6" /db_xref="ECOCYC:EG10281" /db_xref="EcoGene:EG10281" /db_xref="GeneID:948652" /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE SGEIWHRMQKNLPGDLAIQGR" mat_peptide 1234164..1234877 /gene="fadR" /locus_tag="b1187" /gene_synonym="dec; ECK1175; JW1176; ole; oleR; thdB" /product="DNA-binding transcriptional dual regulator of fatty acid metabolism" /experiment="N-terminus verified by Edman degradation: PMID 1569108" gene complement(1234932..1236464) /gene="ycgB" /locus_tag="b1188" /gene_synonym="ECK1176; JW1177" /db_xref="ECOCYC:EG11516" /db_xref="EcoGene:EG11516" /db_xref="GeneID:946365" CDS complement(1234932..1236464) /gene="ycgB" /locus_tag="b1188" /gene_synonym="ECK1176; JW1177" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415706.1" /db_xref="GI:16129151" /db_xref="ASAP:ABE-0003990" /db_xref="UniProtKB/Swiss-Prot:P29013" /db_xref="ECOCYC:EG11516" /db_xref="EcoGene:EG11516" /db_xref="GeneID:946365" /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMG NL" gene 1236794..1238092 /gene="dadA" /locus_tag="b1189" /gene_synonym="dadR; ECK1177; JW1178" /db_xref="ECOCYC:EG11407" /db_xref="EcoGene:EG11407" /db_xref="GeneID:945752" CDS 1236794..1238092 /gene="dadA" /locus_tag="b1189" /gene_synonym="dadR; ECK1177; JW1178" /EC_number="1.4.99.1" /function="enzyme; Degradation of small molecules: Amino acids" /GO_process="GO:0009063 - cellular amino acid catabolic process" /note="D-amino acid dehydrogenase subunit" /codon_start=1 /transl_table=11 /product="D-amino acid dehydrogenase" /protein_id="NP_415707.1" /db_xref="GI:16129152" /db_xref="ASAP:ABE-0003995" /db_xref="UniProtKB/Swiss-Prot:P0A6J5" /db_xref="ECOCYC:EG11407" /db_xref="EcoGene:EG11407" /db_xref="GeneID:945752" /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS" gene 1238102..1239172 /gene="dadX" /locus_tag="b1190" /gene_synonym="alnB; dadB; ECK1178; JW1179; msuA?" /db_xref="ECOCYC:EG11408" /db_xref="EcoGene:EG11408" /db_xref="GeneID:945754" CDS 1238102..1239172 /gene="dadX" /locus_tag="b1190" /gene_synonym="alnB; dadB; ECK1178; JW1179; msuA?" /EC_number="5.1.1.1" /function="enzyme; Degradation of small molecules: Amino acids" /GO_process="GO:0006523 - alanine biosynthetic process; GO:0009063 - cellular amino acid catabolic process" /note="alanine racemase 2, catabolic" /codon_start=1 /transl_table=11 /product="alanine racemase 2, PLP-binding" /protein_id="NP_415708.1" /db_xref="GI:16129153" /db_xref="ASAP:ABE-0003997" /db_xref="UniProtKB/Swiss-Prot:P29012" /db_xref="ECOCYC:EG11408" /db_xref="EcoGene:EG11408" /db_xref="GeneID:945754" /translation="MTRPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIE RIWSAIGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHS NWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHF AEAEHPDGISGAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPS GQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGY PRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAA AAGTVGYELMCALALRVPVVTV" gene complement(1239558..1241294) /gene="cvrA" /locus_tag="b1191" /gene_synonym="ECK1179; JW5184; ycgO" /db_xref="ECOCYC:G6620" /db_xref="EcoGene:EG13896" /db_xref="GeneID:945755" CDS complement(1239558..1241294) /gene="cvrA" /locus_tag="b1191" /gene_synonym="ECK1179; JW5184; ycgO" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="predicted cation/proton antiporter" /protein_id="NP_415709.2" /db_xref="GI:90111230" /db_xref="ASAP:ABE-0003999" /db_xref="UniProtKB/Swiss-Prot:P76007" /db_xref="ECOCYC:G6620" /db_xref="EcoGene:EG13896" /db_xref="GeneID:945755" /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIAMIQHHESNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIAL PAGLYPLLALSGGILIFSLTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA DVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLK IGVRVAEEEAES" gene complement(1241389..1242303) /gene="ldcA" /locus_tag="b1192" /gene_synonym="ECK1180; JW1181; ycgQ" /db_xref="ECOCYC:G6621" /db_xref="EcoGene:EG13898" /db_xref="GeneID:945756" CDS complement(1241389..1242303) /gene="ldcA" /locus_tag="b1192" /gene_synonym="ECK1180; JW1181; ycgQ" /EC_number="3.4.17.13" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="L,D-carboxypeptidase A" /protein_id="NP_415710.1" /db_xref="GI:16129155" /db_xref="ASAP:ABE-0004002" /db_xref="UniProtKB/Swiss-Prot:P76008" /db_xref="ECOCYC:G6621" /db_xref="EcoGene:EG13898" /db_xref="GeneID:945756" /translation="MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCE RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI CGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQ GEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH AGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVT LPLGAHAILNNTREGTQLTISGHPVLKM" gene 1242403..1243014 /gene="emtA" /locus_tag="b1193" /gene_synonym="ECK1181; JW5821; mltE; sltZ; ycgP" /db_xref="ECOCYC:G6622" /db_xref="EcoGene:EG13897" /db_xref="GeneID:945655" CDS 1242403..1243014 /gene="emtA" /locus_tag="b1193" /gene_synonym="ECK1181; JW5821; mltE; sltZ; ycgP" /EC_number="3.2.1.-" /function="enzyme; Murein sacculus, peptidoglycan" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /GO_process="GO:0009252 - peptidoglycan biosynthetic process" /note="murein transglycosylase E" /codon_start=1 /transl_table=11 /product="lytic murein endotransglycosylase E" /protein_id="NP_415711.2" /db_xref="GI:90111231" /db_xref="ASAP:ABE-0004006" /db_xref="UniProtKB/Swiss-Prot:P76009" /db_xref="ECOCYC:G6622" /db_xref="EcoGene:EG13897" /db_xref="GeneID:945655" /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD RKKAISKINDLDADEFLEHVARNHPAPQAPRYIYKLEQALDAM" gene complement(1243016..1243750) /gene="ycgR" /locus_tag="b1194" /gene_synonym="ECK1182; JW1183" /db_xref="ECOCYC:G6623" /db_xref="EcoGene:EG13899" /db_xref="GeneID:947609" CDS complement(1243016..1243750) /gene="ycgR" /locus_tag="b1194" /gene_synonym="ECK1182; JW1183" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="flagellar velocity braking protein, c-di-GMP-regulated" /protein_id="NP_415712.1" /db_xref="GI:16129157" /db_xref="ASAP:ABE-0004009" /db_xref="UniProtKB/Swiss-Prot:P76010" /db_xref="ECOCYC:G6623" /db_xref="EcoGene:EG13899" /db_xref="GeneID:947609" /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKLL AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP TVERQLQRIIFSLEREAREKADKVRD" gene 1243951..1244205 /gene="ymgE" /locus_tag="b1195" /gene_synonym="ECK1183; JW1184; tag" /db_xref="ECOCYC:G6624" /db_xref="EcoGene:EG14338" /db_xref="GeneID:945760" CDS 1243951..1244205 /gene="ymgE" /locus_tag="b1195" /gene_synonym="ECK1183; JW1184; tag" /note="transglycosylase asociated protein" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein" /protein_id="NP_415713.1" /db_xref="GI:16129158" /db_xref="ASAP:ABE-0004014" /db_xref="UniProtKB/Swiss-Prot:P76011" /db_xref="ECOCYC:G6624" /db_xref="EcoGene:EG14338" /db_xref="GeneID:945760" /translation="MGIIAWIIFDLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGG WLATMFGIGGSISGFNLHSFLVAVVGAILVLGIFRLLRRE" gene 1244383..1244823 /gene="ycgY" /locus_tag="b1196" /gene_synonym="ECK1184; JW1185" /db_xref="ECOCYC:G6625" /db_xref="EcoGene:EG14275" /db_xref="GeneID:945761" CDS 1244383..1244823 /gene="ycgY" /locus_tag="b1196" /gene_synonym="ECK1184; JW1185" /codon_start=1 /transl_table=11 /product="predicted protein" /protein_id="NP_415714.1" /db_xref="GI:16129159" /db_xref="ASAP:ABE-0004019" /db_xref="UniProtKB/Swiss-Prot:P76012" /db_xref="ECOCYC:G6625" /db_xref="EcoGene:EG14275" /db_xref="GeneID:945761" /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY SQRRRKSPGDESETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV" gene complement(1244902..1246599) /gene="treA" /locus_tag="b1197" /gene_synonym="ECK1185; JW1186; osmA" /db_xref="ECOCYC:EG11017" /db_xref="EcoGene:EG11017" /db_xref="GeneID:945757" CDS complement(1244902..1246599) /gene="treA" /locus_tag="b1197" /gene_synonym="ECK1185; JW1186; osmA" /EC_number="3.2.1.28" /function="enzyme; Osmotic adaptation" /GO_component="GO:0042597 - periplasmic space" /GO_process="GO:0006006 - glucose metabolic process; GO:0006970 - response to osmotic stress" /note="trehalase, periplasmic" /codon_start=1 /transl_table=11 /product="periplasmic trehalase" /protein_id="NP_415715.1" /db_xref="GI:16129160" /db_xref="ASAP:ABE-0004021" /db_xref="UniProtKB/Swiss-Prot:P13482" /db_xref="ECOCYC:EG11017" /db_xref="EcoGene:EG11017" /db_xref="GeneID:945757" /translation="MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILL GPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPK EGEKYVPPEGQSLREHIDGLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWD SYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELL AQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTP RPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVP VDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDL KSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAP NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGG GGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATRPTVKSATTQPSTKEAQPTP" mat_peptide complement(1244905..1246509) /gene="treA" /locus_tag="b1197" /gene_synonym="ECK1185; JW1186; osmA" /product="periplasmic trehalase" /experiment="N-terminus verified by Edman degradation: PMID 2671658" repeat_region 1246881..1246911 /note="REP107 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1246919..1248337) /gene="dhaM" /locus_tag="b1198" /gene_synonym="dhaH; ECK1186; JW5185; ptsD; ycgC" /db_xref="ECOCYC:EG12399" /db_xref="EcoGene:EG12399" /db_xref="GeneID:945749" CDS complement(1246919..1248337) /gene="dhaM" /locus_tag="b1198" /gene_synonym="dhaH; ECK1186; JW5185; ptsD; ycgC" /note="PTS hybrid protein" /codon_start=1 /transl_table=11 /product="fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component" /protein_id="NP_415716.4" /db_xref="GI:226524708" /db_xref="ASAP:ABE-0004024" /db_xref="UniProtKB/Swiss-Prot:P37349" /db_xref="ECOCYC:EG12399" /db_xref="EcoGene:EG12399" /db_xref="GeneID:945749" /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVE GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI AKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTL TVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASEL LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL YAIQPEETLTLDVKTQRFNRQG" gene complement(1248348..1248980) /gene="dhaL" /locus_tag="b1199" /gene_synonym="dhaK2; ECK1187; JW5186; ptsD; ycgS" /db_xref="ECOCYC:G6626" /db_xref="EcoGene:EG13900" /db_xref="GeneID:945748" CDS complement(1248348..1248980) /gene="dhaL" /locus_tag="b1199" /gene_synonym="dhaK2; ECK1187; JW5186; ptsD; ycgS" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase, C-terminal domain" /protein_id="NP_415717.1" /db_xref="GI:16129162" /db_xref="ASAP:ABE-0004026" /db_xref="UniProtKB/Swiss-Prot:P76014" /db_xref="ECOCYC:G6626" /db_xref="EcoGene:EG13900" /db_xref="GeneID:945748" /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE" gene complement(1248991..1250061) /gene="dhaK" /locus_tag="b1200" /gene_synonym="dhaK1; ECK1188; JW5187; ptsD; ycgT" /db_xref="ECOCYC:G6627" /db_xref="EcoGene:EG13901" /db_xref="GeneID:945747" CDS complement(1248991..1250061) /gene="dhaK" /locus_tag="b1200" /gene_synonym="dhaK1; ECK1188; JW5187; ptsD; ycgT" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit" /protein_id="NP_415718.6" /db_xref="GI:162135900" /db_xref="ASAP:ABE-0004029" /db_xref="UniProtKB/Swiss-Prot:P76015" /db_xref="ECOCYC:G6627" /db_xref="EcoGene:EG13901" /db_xref="GeneID:945747" /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLI IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH GEPGIDRRPFSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK VDDETLALWDAPVHTPALNWGK" gene 1250289..1252208 /gene="dhaR" /locus_tag="b1201" /gene_synonym="ECK1189; JW5188; ptsD; ycgU" /db_xref="ECOCYC:G6628" /db_xref="EcoGene:EG13902" /db_xref="GeneID:945743" CDS 1250289..1252208 /gene="dhaR" /locus_tag="b1201" /gene_synonym="ECK1189; JW5188; ptsD; ycgU" /function="putative regulator; Not classified" /GO_function="GO:0016563 - transcription activator activity" /GO_process="GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DNA-binding transcription activator of the dhaKLM operon" /protein_id="NP_415719.2" /db_xref="GI:90111234" /db_xref="ASAP:ABE-0004033" /db_xref="UniProtKB/Swiss-Prot:P76016" /db_xref="ECOCYC:G6628" /db_xref="EcoGene:EG13902" /db_xref="GeneID:945743" /translation="MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFA SIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGF NDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQVLWNWAFCATPLFDSKGRLTGT IALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVIS WDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFE SQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQT RRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAAL AEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDA RRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNN KLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSDLPE HLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTLWRK MKQHGIDAGQFKRRV" gene complement(1252308..1255175) /gene="ycgV" /locus_tag="b1202" /gene_synonym="ECK1190; JW1193" /db_xref="ECOCYC:G6629" /db_xref="EcoGene:EG13903" /db_xref="GeneID:945767" CDS complement(1252308..1255175) /gene="ycgV" /locus_tag="b1202" /gene_synonym="ECK1190; JW1193" /function="putative factor; Not classified" /GO_component="GO:0009279 - cell outer membrane" /note="putative adhesion and penetration protein" /codon_start=1 /transl_table=11 /product="predicted adhesin" /protein_id="NP_415720.1" /db_xref="GI:16129165" /db_xref="ASAP:ABE-0004035" /db_xref="UniProtKB/Swiss-Prot:P76017" /db_xref="ECOCYC:G6629" /db_xref="EcoGene:EG13903" /db_xref="GeneID:945767" /translation="MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLL IAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVND ASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNN ANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSA NALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDAIINFTGTAAQRNS IFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGA RGIYAMTNSQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKG GLINLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFAS HGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNHVLAIRN QGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNGTNWELYASGTVPEPT PNPEPTPAPAQPPIVNPDPTPEPAPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRM GDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSGIQFGGDKRLSDVMPLYVGLY IGSTHASPDYSGGDGTARSDYMGMYASYMAQNGFYSDLVIKASRQKNSFHVLDSQNNG VNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQNEMTMKASNGLNIHLN HYESLLGRASMILGYDITAGNSQLNVYVKTGAIREFSGDTEYLLNNSREKYSFKGNGW NNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF" gene complement(1255944..1257035) /gene="ychF" /locus_tag="b1203" /gene_synonym="ECK1191; engD; gtp1; JW1194" /db_xref="ECOCYC:EG11404" /db_xref="EcoGene:EG11404" /db_xref="GeneID:945769" CDS complement(1255944..1257035) /gene="ychF" /locus_tag="b1203" /gene_synonym="ECK1191; engD; gtp1; JW1194" /function="phenotype; Not classified" /note="putative GTP-binding protein" /codon_start=1 /transl_table=11 /product="predicted GTP-binding protein" /protein_id="NP_415721.1" /db_xref="GI:16129166" /db_xref="ASAP:ABE-0004038" /db_xref="UniProtKB/Swiss-Prot:P0ABU2" /db_xref="ECOCYC:EG11404" /db_xref="EcoGene:EG11404" /db_xref="GeneID:945769" /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ GAKEAGKMRAEGKDYIVKDGDVMNFLFNV" mat_peptide complement(1255947..1257032) /gene="ychF" /locus_tag="b1203" /gene_synonym="ECK1191; engD; gtp1; JW1194" /product="predicted GTP-binding protein" /experiment="N-terminus verified by Edman degradation: PMID 9298646" gene complement(1257152..1257736) /gene="pth" /locus_tag="b1204" /gene_synonym="asuA?; ECK1192; JW1195; rap" /db_xref="ECOCYC:EG10785" /db_xref="EcoGene:EG10785" /db_xref="GeneID:945765" CDS complement(1257152..1257736) /gene="pth" /locus_tag="b1204" /gene_synonym="asuA?; ECK1192; JW1195; rap" /EC_number="3.1.1.29" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 1833189" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="NP_415722.1" /db_xref="GI:16129167" /db_xref="ASAP:ABE-0004043" /db_xref="UniProtKB/Swiss-Prot:P0A7D1" /db_xref="ECOCYC:EG10785" /db_xref="EcoGene:EG10785" /db_xref="GeneID:945765" /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ" gene 1258014..1258292 /gene="ychH" /locus_tag="b1205" /gene_synonym="ECK1193; JW1196" /db_xref="ECOCYC:EG11533" /db_xref="EcoGene:EG11533" /db_xref="GeneID:945762" CDS 1258014..1258292 /gene="ychH" /locus_tag="b1205" /gene_synonym="ECK1193; JW1196" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein" /protein_id="NP_415723.1" /db_xref="GI:16129168" /db_xref="ASAP:ABE-0004049" /db_xref="UniProtKB/Swiss-Prot:P0AB49" /db_xref="ECOCYC:EG11533" /db_xref="EcoGene:EG11533" /db_xref="GeneID:945762" /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS" gene complement(1258347..1260026) /gene="ychM" /locus_tag="b1206" /gene_synonym="ECK1194; JW5189" /db_xref="ECOCYC:EG12392" /db_xref="EcoGene:EG12392" /db_xref="GeneID:945770" CDS complement(1258347..1260026) /gene="ychM" /locus_tag="b1206" /gene_synonym="ECK1194; JW5189" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="putative sulfate transporter" /codon_start=1 /transl_table=11 /product="predicted transporter" /protein_id="NP_415724.2" /db_xref="GI:90111235" /db_xref="ASAP:ABE-0004051" /db_xref="UniProtKB/Swiss-Prot:P0AFR2" /db_xref="ECOCYC:EG12392" /db_xref="EcoGene:EG12392" /db_xref="GeneID:945770" /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGL AGLLVATLLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL" gene complement(1260151..1261098) /gene="prs" /locus_tag="b1207" /gene_synonym="dnaR; ECK1195; JW1198; prsA" /db_xref="ECOCYC:EG10774" /db_xref="EcoGene:EG10774" /db_xref="GeneID:945772" CDS complement(1260151..1261098) /gene="prs" /locus_tag="b1207" /gene_synonym="dnaR; ECK1195; JW1198; prsA" /EC_number="2.7.6.1" /function="enzyme; Purine ribonucleotide biosynthesis" /GO_process="GO:0009152 - purine ribonucleotide biosynthetic process" /note="phosphoribosylpyrophosphate synthetase" /codon_start=1 /transl_table=11 /product="phosphoribosylpyrophosphate synthase" /protein_id="NP_415725.1" /db_xref="GI:16129170" /db_xref="ASAP:ABE-0004054" /db_xref="UniProtKB/Swiss-Prot:P0A717" /db_xref="ECOCYC:EG10774" /db_xref="EcoGene:EG10774" /db_xref="GeneID:945772" /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH" mat_peptide complement(1260154..1261095) /gene="prs" /locus_tag="b1207" /gene_synonym="dnaR; ECK1195; JW1198; prsA" /product="phosphoribosylpyrophosphate synthase" /experiment="N-terminus verified by Edman degradation: PMID 9298646,11248028" gene complement(1261249..1262100) /gene="ispE" /locus_tag="b1208" /gene_synonym="ECK1196; ipk; JW1199; ychB" /db_xref="ECOCYC:EG11294" /db_xref="EcoGene:EG11294" /db_xref="GeneID:945774" CDS complement(1261249..1262100) /gene="ispE" /locus_tag="b1208" /gene_synonym="ECK1196; ipk; JW1199; ychB" /EC_number="2.7.1.148" /GO_component="GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2-C-methylerythritol kinase" /protein_id="NP_415726.1" /db_xref="GI:16129171" /db_xref="ASAP:ABE-0004056" /db_xref="UniProtKB/Swiss-Prot:P62615" /db_xref="ECOCYC:EG11294" /db_xref="EcoGene:EG11294" /db_xref="GeneID:945774" /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLS PLHRAML" gene complement(1262100..1262723) /gene="lolB" /locus_tag="b1209" /gene_synonym="ECK1197; hemM; JW1200; ychC" /db_xref="ECOCYC:EG11293" /db_xref="EcoGene:EG11293" /db_xref="GeneID:945775" CDS complement(1262100..1262723) /gene="lolB" /locus_tag="b1209" /gene_synonym="ECK1197; hemM; JW1200; ychC" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /GO_component="GO:0009279 - cell outer membrane; GO:0009274 - peptidoglycan-based cell wall" /note="outer-membrane lipoprotein" /codon_start=1 /transl_table=11 /product="OM lipoprotein required for localization of lipoproteins" /protein_id="NP_415727.1" /db_xref="GI:16129172" /db_xref="ASAP:ABE-0004059" /db_xref="UniProtKB/Swiss-Prot:P61320" /db_xref="ECOCYC:EG11293" /db_xref="EcoGene:EG11293" /db_xref="GeneID:945775" /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI TYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK" gene 1262937..1264193 /gene="hemA" /locus_tag="b1210" /gene_synonym="ECK1198; gtrA; JW1201" /db_xref="ECOCYC:EG10427" /db_xref="EcoGene:EG10427" /db_xref="GeneID:945777" CDS 1262937..1264193 /gene="hemA" /locus_tag="b1210" /gene_synonym="ECK1198; gtrA; JW1201" /EC_number="1.2.1.-" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0042493 - response to drug" /note="glutamyl-tRNA reductase" /codon_start=1 /transl_table=11 /product="glutamyl tRNA reductase" /protein_id="NP_415728.1" /db_xref="GI:16129173" /db_xref="ASAP:ABE-0004064" /db_xref="UniProtKB/Swiss-Prot:P0A6X1" /db_xref="ECOCYC:EG10427" /db_xref="EcoGene:EG10427" /db_xref="GeneID:945777" /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER AQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA WLRAQSASETIREYRSQAEQVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP TKSLQQAARDGDNERLNILRDSLGLE" gene 1264235..1265317 /gene="prfA" /locus_tag="b1211" /gene_synonym="ECK1199; JW1202; sueB; uar; ups?" /db_xref="ECOCYC:EG10761" /db_xref="EcoGene:EG10761" /db_xref="GeneID:949002" CDS 1264235..1265317 /gene="prfA" /locus_tag="b1211" /gene_synonym="ECK1199; JW1202; sueB; uar; ups?" /function="factor; Proteins - translation and modification" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="peptide chain release factor RF-1" /protein_id="NP_415729.1" /db_xref="GI:16129174" /db_xref="ASAP:ABE-0004066" /db_xref="UniProtKB/Swiss-Prot:P0A7I0" /db_xref="ECOCYC:EG10761" /db_xref="EcoGene:EG10761" /db_xref="GeneID:949002" /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLP KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME GKLDMLIEPIIQEHQADQLAALSEQE" gene 1265317..1266150 /gene="prmC" /locus_tag="b1212" /gene_synonym="ECK1200; hemK; JW1203" /db_xref="ECOCYC:EG12424" /db_xref="EcoGene:EG12424" /db_xref="GeneID:945779" CDS 1265317..1266150 /gene="prmC" /locus_tag="b1212" /gene_synonym="ECK1200; hemK; JW1203" /EC_number="2.1.1.-" /function="putative enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="possible protoporphyrinogen oxidase" /codon_start=1 /transl_table=11 /product="N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2" /protein_id="NP_415730.1" /db_xref="GI:16129175" /db_xref="ASAP:ABE-0004068" /db_xref="UniProtKB/Swiss-Prot:P0ACC1" /db_xref="ECOCYC:EG12424" /db_xref="EcoGene:EG12424" /db_xref="GeneID:945779" /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQA LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY Q" gene 1266147..1266539 /gene="ychQ" /locus_tag="b1213" /gene_synonym="ECK1201; JW1204; sirB2" /db_xref="ECOCYC:G6630" /db_xref="EcoGene:EG14293" /db_xref="GeneID:945781" CDS 1266147..1266539 /gene="ychQ" /locus_tag="b1213" /gene_synonym="ECK1201; JW1204; sirB2" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="predicted inner membrane protein, SIRB family" /protein_id="NP_415731.1" /db_xref="GI:16129176" /db_xref="ASAP:ABE-0004071" /db_xref="UniProtKB/Swiss-Prot:Q46755" /db_xref="ECOCYC:G6630" /db_xref="EcoGene:EG14293" /db_xref="GeneID:945781" /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV PPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ ARIIAFPLALVVLYIIIKLATTKVPLLG" gene 1266543..1267352 /gene="ychA" /locus_tag="b1214" /gene_synonym="ECK1202; JW1205; sirB1" /db_xref="ECOCYC:EG11251" /db_xref="EcoGene:EG11251" /db_xref="GeneID:945784" CDS 1266543..1267352 /gene="ychA" /locus_tag="b1214" /gene_synonym="ECK1202; JW1205; sirB1" /GO_process="GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415732.1" /db_xref="GI:16129177" /db_xref="ASAP:ABE-0004074" /db_xref="UniProtKB/Swiss-Prot:P0AGM5" /db_xref="ECOCYC:EG11251" /db_xref="EcoGene:EG11251" /db_xref="GeneID:945784" /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH" gene 1267388..1268242 /gene="kdsA" /locus_tag="b1215" /gene_synonym="ECK1203; JW1206" /db_xref="ECOCYC:EG10518" /db_xref="EcoGene:EG10518" /db_xref="GeneID:945785" CDS 1267388..1268242 /gene="kdsA" /locus_tag="b1215" /gene_synonym="ECK1203; JW1206" /EC_number="2.5.1.55" /function="enzyme; Surface polysaccharides & antigens" /experiment="N-terminus verified by Edman degradation: PMID 7775423,9298646" /GO_component="GO:0005737 - cytoplasm; GO:0009274 - peptidoglycan-based cell wall" /GO_function="GO:0042280 - cell surface antigen activity, host-interacting" /GO_process="GO:0009248 - K antigen biosynthetic process; GO:0009244 - lipopolysaccharide core region biosynthetic process" /note="2-dehydro-3-deoxyphosphooctulonate aldolase" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonate 8-phosphate synthase" /protein_id="NP_415733.1" /db_xref="GI:16129178" /db_xref="ASAP:ABE-0004077" /db_xref="UniProtKB/Swiss-Prot:P0A715" /db_xref="ECOCYC:EG10518" /db_xref="EcoGene:EG10518" /db_xref="GeneID:945785" /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG FEELDTSK" gene complement(1268391..1268498) /gene="ldrA" /locus_tag="b4419" /gene_synonym="ECK1204; JW5957" /db_xref="ECOCYC:G0-9602" /db_xref="EcoGene:EG14403" /db_xref="GeneID:2847733" CDS complement(1268391..1268498) /gene="ldrA" /locus_tag="b4419" /gene_synonym="ECK1204; JW5957" /function="component of addiction module" /function="cell killing" /note="small toxic polypeptide" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="YP_025297.1" /db_xref="GI:49176087" /db_xref="ASAP:ABE-0047280" /db_xref="UniProtKB/Swiss-Prot:Q6BF86" /db_xref="ECOCYC:G0-9602" /db_xref="EcoGene:EG14403" /db_xref="GeneID:2847733" /translation="MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK" gene 1268546..1268612 /gene="rdlA" /locus_tag="b4420" /gene_synonym="ECK1205; JWR0229" /db_xref="ECOCYC:G0-9603" /db_xref="EcoGene:EG31139" /db_xref="GeneID:2847734" ncRNA 1268546..1268612 /gene="rdlA" /locus_tag="b4420" /gene_synonym="ECK1205; JWR0229" /ncRNA_class="antisense_RNA" /product="sRNA antisense regulator affects LdrA translation; proposed addiction module in LDR-A repeat, with toxic peptide LdrA" /note="antisense RNA, trans-acting regulator of ldrA translation" /function="component of addiction module" /db_xref="ASAP:ABE-0047243" /db_xref="ECOCYC:G0-9603" /db_xref="EcoGene:EG31139" /db_xref="GeneID:2847734" gene complement(1268926..1269033) /gene="ldrB" /locus_tag="b4421" /gene_synonym="ECK1206; JW5958" /db_xref="ECOCYC:G0-9605" /db_xref="EcoGene:EG14404" /db_xref="GeneID:2847735" CDS complement(1268926..1269033) /gene="ldrB" /locus_tag="b4421" /gene_synonym="ECK1206; JW5958" /function="component of addiction module" /function="cell killing" /note="small toxic polypeptide" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="YP_025298.1" /db_xref="GI:49176088" /db_xref="ASAP:ABE-0047281" /db_xref="UniProtKB/Swiss-Prot:Q6BF87" /db_xref="ECOCYC:G0-9605" /db_xref="EcoGene:EG14404" /db_xref="GeneID:2847735" /translation="MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK" gene 1269081..1269146 /gene="rdlB" /locus_tag="b4422" /gene_synonym="ECK1207; JWR0230" /db_xref="ECOCYC:G0-9606" /db_xref="EcoGene:EG31140" /db_xref="GeneID:2847770" ncRNA 1269081..1269146 /gene="rdlB" /locus_tag="b4422" /gene_synonym="ECK1207; JWR0230" /ncRNA_class="antisense_RNA" /product="sRNA antisense regulator affects LdrB translation; proposed addiction module in LDR-B repeat, with toxic peptide LdrB" /note="antisense RNA, trans-acting regulator of ldrB translation" /function="component of addiction module" /db_xref="ASAP:ABE-0047244" /db_xref="ECOCYC:G0-9606" /db_xref="EcoGene:EG31140" /db_xref="GeneID:2847770" gene complement(1269461..1269568) /gene="ldrC" /locus_tag="b4423" /gene_synonym="ECK1208; JW5959" /db_xref="ECOCYC:G0-9607" /db_xref="EcoGene:EG14405" /db_xref="GeneID:2847775" CDS complement(1269461..1269568) /gene="ldrC" /locus_tag="b4423" /gene_synonym="ECK1208; JW5959" /function="component of addiction module" /function="cell killing" /note="small toxic polypeptide" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="YP_025299.1" /db_xref="GI:49176089" /db_xref="ASAP:ABE-0047282" /db_xref="UniProtKB/Swiss-Prot:Q6BF86" /db_xref="ECOCYC:G0-9607" /db_xref="EcoGene:EG14405" /db_xref="GeneID:2847775" /translation="MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK" gene 1269616..1269683 /gene="rdlC" /locus_tag="b4424" /gene_synonym="ECK1209; JWR0231" /db_xref="ECOCYC:G0-9608" /db_xref="EcoGene:EG31141" /db_xref="GeneID:2847680" ncRNA 1269616..1269683 /gene="rdlC" /locus_tag="b4424" /gene_synonym="ECK1209; JWR0231" /ncRNA_class="antisense_RNA" /product="sRNA antisense regulator affects LdrC translation; proposed addiction module in LDR-C repeat, with toxic peptide LdrC" /note="antisense RNA, trans-acting regulator of ldrC translation" /function="component of addiction module" /db_xref="ASAP:ABE-0047245" /db_xref="ECOCYC:G0-9608" /db_xref="EcoGene:EG31141" /db_xref="GeneID:2847680" gene complement(1269972..1271072) /gene="chaA" /locus_tag="b1216" /gene_synonym="ECK1210; JW1207" /db_xref="ECOCYC:EG11753" /db_xref="EcoGene:EG11753" /db_xref="GeneID:945790" CDS complement(1269972..1271072) /gene="chaA" /locus_tag="b1216" /gene_synonym="ECK1210; JW1207" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0019866 - organelle inner membrane; GO:0009274 - peptidoglycan-based cell wall" /note="sodium-calcium/proton antiporter" /codon_start=1 /transl_table=11 /product="calcium/sodium:proton antiporter" /protein_id="NP_415734.1" /db_xref="GI:16129179" /db_xref="ASAP:ABE-0004082" /db_xref="UniProtKB/Swiss-Prot:P31801" /db_xref="ECOCYC:EG11753" /db_xref="EcoGene:EG11753" /db_xref="GeneID:945790" /translation="MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINL LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH SSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGAL KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA" gene 1271342..1271572 /gene="chaB" /locus_tag="b1217" /gene_synonym="ECK1211; JW1208" /db_xref="ECOCYC:EG12402" /db_xref="EcoGene:EG12402" /db_xref="GeneID:945792" CDS 1271342..1271572 /gene="chaB" /locus_tag="b1217" /gene_synonym="ECK1211; JW1208" /function="regulator; Transport of small molecules: Cations" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="cation transport regulator" /protein_id="NP_415735.1" /db_xref="GI:16129180" /db_xref="ASAP:ABE-0004087" /db_xref="UniProtKB/Swiss-Prot:P0AE63" /db_xref="ECOCYC:EG12402" /db_xref="EcoGene:EG12402" /db_xref="GeneID:945792" /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRD DASREETAHKVAWAAVKHEYAKGDDDKWHKKS" gene 1271730..1272425 /gene="chaC" /locus_tag="b1218" /gene_synonym="ECK1212; JW1209" /db_xref="ECOCYC:EG12403" /db_xref="EcoGene:EG12403" /db_xref="GeneID:945793" CDS 1271730..1272425 /gene="chaC" /locus_tag="b1218" /gene_synonym="ECK1212; JW1209" /function="transport; Transport of small molecules: Cations" /GO_component="GO:0005737 - cytoplasm" /GO_process="GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="cation transport regulator" /protein_id="NP_415736.2" /db_xref="GI:145698247" /db_xref="ASAP:ABE-0004089" /db_xref="UniProtKB/Swiss-Prot:P39163" /db_xref="ECOCYC:EG12403" /db_xref="EcoGene:EG12403" /db_xref="GeneID:945793" /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHP EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA ENFPDGVLRPGFA" gene complement(1272469..1272822) /gene="ychN" /locus_tag="b1219" /gene_synonym="ECK1213; JW1210" /db_xref="ECOCYC:EG12404" /db_xref="EcoGene:EG12404" /db_xref="GeneID:945794" CDS complement(1272469..1272822) /gene="ychN" /locus_tag="b1219" /gene_synonym="ECK1213; JW1210" /codon_start=1 /transl_table=11 /product="conserved protein" /protein_id="NP_415737.1" /db_xref="GI:16129182" /db_xref="ASAP:ABE-0004091" /db_xref="UniProtKB/Swiss-Prot:P0AB52" /db_xref="ECOCYC:EG12404" /db_xref="EcoGene:EG12404" /db_xref="GeneID:945794" /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV