Tutorial Topics

We are in the process of adding tutorials and background information on our model generation and curation tools.

Web Tools for Models

  1. Using ModelView to explore, compare and test metabolic models.
  2. Creating new media formulations.
  3. Creating new biomass functions.

Frequently Asked Methodology Questions

  1. What is a model?
  2. Constructing an initial model
  3. What is metabolic flux balance analysis?
  4. What is a biomass reaction?
  5. What is gap-filling? What was added to the reaction network to construct the initial model?
  6. How can I make predictions about essential genes?
  7. What are the nutrients that must be in the media to support growth?
  8. Predicting growth behavior on various media using the model.

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