Simply retrieving all the features for a given genome is often the first step in an analysis sequence. This command is designed to be issued at the command line and takes as arguments a genome id and a feature type. The output is a single column table containing feature ids, suitable for piping into subsequent commands.
svr_all_features genome_id feature_type
This script returns all features of the specified type for the specified genome.
The code for this server is here. The man page is here.
Here is an example of running this command:
> svr_all_features 3702.1 peg
fig|3702.1.peg.1
fig|3702.1.peg.2
fig|3702.1.peg.3
fig|3702.1.peg.4
fig|3702.1.peg.5
fig|3702.1.peg.6
fig|3702.1.peg.7
fig|3702.1.peg.8
fig|3702.1.peg.9
fig|3702.1.peg.10
fig|3702.1.peg.11
fig|3702.1.peg.12
fig|3702.1.peg.13
fig|3702.1.peg.14
fig|3702.1.peg.15
.
.
.
